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Anopheles gambiae
cluster # 8098 cluster # 8098       Sequences # 9       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8098#0 length = 973 sequences # 3  
consensus_8098#1 length = 851 sequences # 2  
consensus_8098#2 length = 663 sequences # 1  
consensus_8098#3 length = 549 sequences # 2  
consensus_8098#4 length = 444 sequences # 1  

consensusID : consensus_8098#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 973
fasta sequence
                              [CCGCCCACGCGTCCGGGAAGAAGCAAAGAAGGAGAAAAAAAAACAATTGGAGCAACTACGATGGTAACCAGCTGTTTTGTATCAACTTTTAATTGGTCGAAATTTGTAATTGAATGCGCAATTTTGTAAGCAGAAGTGTAGAGAAGCTGCGGGCCCGGGAGGCAGCGAAGGATGGAGCGATGTTAAGGAAGCGATGAAAGCAAAACATTTGAACCCCCAGCCCCAAGAGGGGGAAGAGCAGCAGCACAATTAAACAGTATGATCCGCGTCCCCCCGACTCCGGCAGAACTTAACCGTGGAA-GGTGTACACGGGAGAGCGCGGTTGCACTAC-AGGAACCAAGATGTAAAACACACACAGGTGGTACACTAACTTTCTCGACGTTTTTAGCTGTTTGGTGTCTCTTTGTATATGTTGATGTGCTAAATTGCACCCAGGCAAGGTTGGAGAGGTCGGCAAGGGTACGATCGTGTTGCGTCCCGCAAGCTAATGCAACAATACATAGGCGACAGATGGAGCACGATCGTTTCTGAATTTAATTCTGAACGTCTTTTGTATGGATCAATCCTTTTTCTTTCATCGGGGTCGTATCGCGATGAAGTGTGGCGTTTTCTAGGAACATACACTTCTTCTAGCAAAAGGCGACCTCTACTACTACTAATCTGGTAATTATCTTGGTGGTTTTCATACTTACACTTGCTGTATCGTTGTAGATCGTTTACAAAGCGAAGTGTATCTACTTTCTTTTCCCAACACTGAAACAAAATTTCAATTTACGTCCCCCATCGTTGGAGTATTACAACACAACAACACTACTCGCTCCTTTTCCTTTCCTACGGTGTGTAATGTTGCCTTGTGAGATGTTTCAATGTGTACAGTAACAGTGGACAGGTGGATGAAAAAACACGAATAAAAGTGGAAATAATTACAGAATTGGTGCTTTGCAATGAGAAAGACGGACGGGATTGGGGAGGC]

[+] EMBL BM630508             [CCGCCCACGCGTCCGGGAAGAAGCAAAGAAGGAGAAAAAAAAACAATTGGAGCAACTACGATGGTAACCAGCTGTTTTGTATCAACTTTTAATTGGTCGAAATTTGTAATTGAATGCGCAATTTTGTAAGCAGAAGTGTAGAGAAGCTGCGGGCCCGGGAGGCAGCGAAGGATGGAGCGATGTTAAGGAAGCGATGAAAGCAAAACATTTGAACCCCCAGCCCCAAGAGGGGGAAGAGCAGCAGCACAATTAAACAGTATGATCCGCGTCCCCCCGACTCCGGCAGAACTTAACCGTGGAAGGGTGTACACGGGAGGGCGCGGTTGCACTACAAGGAACCAAGATGTAAAACACACACAGGTGGTACACTAACTTTCTCGACGTTTTTAGCTGTTTGGTGTCTCTTTGTATATGTTGATGTGCTAAATTGCACCCAGGCAAGGTTGGAGAGGTCGGCAAGGGTACGATCGTGTTGCGTCCCGCAAACTAATGCAACAATACGTAGGCGACAGATGGAGCACGATCGTTTGTGAATTTAATTGTGAACGTCTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM619283             [                                                                                                                                                                                                                                                                             CCGCTCGACTCCGGCAGAACTTAACCGTGGAA GGTGTACACGGGAGAGCGCGGTTGCACTAC AGGAACCAAGATGTAAAACACACACAGGTGGTACACTAACTTTCTCGACGTTTTTAGCTGTTTGGTGTCTCTTTGTATATGATGATGTGCTAAATTGCACCCAGGCAAGGTTGGAGAGGTCGGCAAGGGTACGATCGTGTTGCGTCCCGCAAGCTAATGCAACAATACATAGGCGACAGATGGAGCACGATCGTTTCTGAATTTAATTCTGAACGTCTTTTGTATGGATCAATCCTTTTTCTTTCATCGGGGTCGTATCGCGATGAAGTGTGGCGTTTTCTAGGAACATACACTTCTTCTAGCAAAAGGCGACCTCTACTACTACTAATCTGGTAATTATCTTGGTGGTTTTCATACTTACACTTGCTGTATCGTTGTAGATCGTTTACAAAGCGAAGTGTATCTACTTTCTTTTCCCAACACTGAAACAAAATTTCAATTTACGTCCCCCATCGTTGGAGTATTACAACACAACAACACTACTCGCTCCTTTTCCTTTCCTACGGTGTGTAATGTTGCCTTGTGAGATGTTTCAATGTGTACAGTAACAGTGGACAGGTGGATGAAAAAACACGAATAAAAGTGGAAATAATTACAGAATTGGTGCTTTGCAATGAGAAAGACGGACGGGATTGGGG    ]
[+] EMBL BM647056             [                                                                                                                                                                                                                                                                                                                   ccgCGGGAGAGCGCGGTTGCACTAC AGGAACCAAGATGTAAAACACACACAGGTGGTACACTAACTTTCTCGACGTTTTTAGCTGTTTGGTGTCTCTTTGTATATGTTGATGTGCTAAATTGCACCCAGGCAAGGTTGGAGAGGTCGGCAAGGGTACGATCGTGTTGCGTCCCGCAAGCTAATGCAACAATACATAGGCGACAGATGGAGCACGATCGTTTCTGAATTTAATTCTGAACGTCTTTTGTATGGATCAATCCTTTTTCTTTCATCGGGGTCGTATCGCGATGAAGTGTGGCGTTTTCTAGGAACATACACTTCTTCTAGCAAAAGGCGACCTCTACTACTACTAATCTGGTAATTATCTTGGTGGTTTTCATACTTACACTTGCTGTATCGTTGTAGATCGTTTACAAAGCGAAGTGTATCTACTTTCTTTTCCCAACACTGAAACAAAATTTCAATTTACGTCCCCCATCGTTGGAGTATTACAACACAACAACACTACTCGCTCCTTTTCCTTTCCTACGGTGTGTAATGTTGCCTTGTGAGATGTTTCAATGTGTACAGTAACAGTGGACAGGTGGATGAAAAAACACGAATAAAAGTGGAAATAATTACAGAATTGGTGCTTTGCAATGAGAAAGACGGACGGGATTGGGAAGGC]


>consensus_8098#0 CCGCCCACGCGTCCGGGAAGAAGCAAAGAAGGAGAAAAAAAAACAATTGGAGCAACTACG ATGGTAACCAGCTGTTTTGTATCAACTTTTAATTGGTCGAAATTTGTAATTGAATGCGCA ATTTTGTAAGCAGAAGTGTAGAGAAGCTGCGGGCCCGGGAGGCAGCGAAGGATGGAGCGA TGTTAAGGAAGCGATGAAAGCAAAACATTTGAACCCCCAGCCCCAAGAGGGGGAAGAGCA GCAGCACAATTAAACAGTATGATCCGCGTCCCCCCGACTCCGGCAGAACTTAACCGTGGA AGGTGTACACGGGAGAGCGCGGTTGCACTACAGGAACCAAGATGTAAAACACACACAGGT GGTACACTAACTTTCTCGACGTTTTTAGCTGTTTGGTGTCTCTTTGTATATGTTGATGTG CTAAATTGCACCCAGGCAAGGTTGGAGAGGTCGGCAAGGGTACGATCGTGTTGCGTCCCG CAAGCTAATGCAACAATACATAGGCGACAGATGGAGCACGATCGTTTCTGAATTTAATTC TGAACGTCTTTTGTATGGATCAATCCTTTTTCTTTCATCGGGGTCGTATCGCGATGAAGT GTGGCGTTTTCTAGGAACATACACTTCTTCTAGCAAAAGGCGACCTCTACTACTACTAAT CTGGTAATTATCTTGGTGGTTTTCATACTTACACTTGCTGTATCGTTGTAGATCGTTTAC AAAGCGAAGTGTATCTACTTTCTTTTCCCAACACTGAAACAAAATTTCAATTTACGTCCC CCATCGTTGGAGTATTACAACACAACAACACTACTCGCTCCTTTTCCTTTCCTACGGTGT GTAATGTTGCCTTGTGAGATGTTTCAATGTGTACAGTAACAGTGGACAGGTGGATGAAAA AACACGAATAAAAGTGGAAATAATTACAGAATTGGTGCTTTGCAATGAGAAAGACGGACG GGATTGGGGAGGC



consensusID : consensus_8098#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 851
fasta sequence
                              [CCGTGTTTTTGTACGCAAACCGGGTAGTCCCAGTTACATATAAATGCTGCTTTTTTCTTACTTTCTAATTATTACATGTAAAGTAAAAGTCCCCTCACTAAGCAACTAACATGCACTGGTGTGTGCGCACTGCTGCTGCGGCATAGGACGAAATTAGAAATTCCACAAGGCTGGCCCTTTGTTTTGTCTATCGTCCCACATAGTAATACACTTACAACAGTATCGCAAGATAACACATTTTACCGGCATGTTTATTAAAAAACCCAACAACAAAAAACACCTAAAATGTGAGGTTTTATTGTAGTAAAGTCAACCAACAGTAGTCGACAGCAACCGTAGAAGATTTGTCCACGATTTGTCCCATCTTCTTACTCAAAACCTCAAAATGCTAACATGAACTCAACGCTAGCGAAGCATAGTGTAATGTGCAGCTTAGTGCATGCCGACTTGAGTGCGTATAGTGATCGATATAGTACGGATGAGTTATCGTTTTCTCCGATCAATACCACAGCTCAAAAGTCTTTCTAGTAGTTTGTTGAGAGGTCATCCACGTCCTTGTTGCACTAGCGTAGACTACTAGAACAGTACCGACAGAGGGAAAGCGAGAGAGAGAGAGAAGGAGAGAAAGTGAGCGTTTAGTAGCTCCGTAGACTGCTTAGTGTCCTGGGTCCGAGAAATTAAATGGTAAATTAATTACTACAACTTTCTCCAAATCCCATTTGAGCCAAATTTACTTGTAGAGTCAGCCTCTTGTTAGATTTCTCCCTTTCCTCTTCTCTCGTTCGTTCGCGCTAAAATCCCGTTTTGGCGGAAGTTGTGTAGTGTGCACTAGGCAAATTTTCAAAACCCCC]

[+] EMBL BM643582             [CCGTGTTTTTGTACGCAAACCGGGTAGTCCCAGTTACATATAAATGCTGCTTTTTTCTTACTTTCTAATTATTACATGTAAAGTAAAAGTCCCCTCACTAAGCAACTAACATGCACTGGTGTGTGCGCACTGCTGCTGCGGCATAGGACGAAATTAGAAATTCCACAAGGCTGGCCCTTTGTTTTGTCTATCGTCCCACATAGTAATACACTTACAACAGTATCGCAAGATAACACATTTTACCGGCATGTTTATTAAAAAACCCAACAACAAAAAACACCTAAAATGTGAGGTTTTATTGTAGTAAAGTCAACCAACAGTAGTCGACAGCAACCGTAGAAGATTTGTCCACGATTTGTCCCATCTTCTTACTCAAAACCTCAAAATGCTAACATGAACTCAACGCTAGCGAAGCATAGTGTAATGTGCAGCTTAGTGCATGCCGACTTGAGTGCGTATAGTGATCGATATAGTACGGATGAGTTATCGTTTTCTCCGATCAATACCACAGCTCAAAAGTCTTTCTAGTAGTTTGTTGAGAGGTCATCCACGTCCTTGTTGCACTAGCGTAGACTACTAGAACAGTACCGACAGAGGGAAAGCGAGAGAGAGAGAGAA                                                                                                                                                                                                                                         ]
[+] EMBL BX608920             [                                                                                                                                                                                                                                                                                                           TGTAGTAAAGTCAACCAACAGTAGTCGACAGCAACCGTAGAAGATTTGTCCACGATTTGTCCCATCTTCTTACTCAAAACCTCAAAATGCTAACATGAACTCAACGCTAGCGAAGCATAGTGTAATGTGCAGCTTAGTGCATGCCGACTTGAGTGCGTATAGTGATCGATATAGTACGGATGAGTTATCGTTTTCTCCGATCAATACCACAGCTCAAAAGTCTTTCTAGTAGTTTGTTGAGAGGTCATCCACGTCCTTGTTGCACTAGCGTAGACTACTAGAACAGTACCGACATAGGGAAAGCGAGAGAGAGAGAGAAGGAGAGAAAGTGAGCGTTTAGTAGCTCCGTAGACTGCTTAGTGTCCTGGGTCCGAGAAATTAAATGGTAAATTAATTACTACAACTTTCTCCAAATCCCATTTGAGCCAAATTTACTTGTAGAGTCAGCCTCTTGTTAGATTTCTCCCTTTCCTCTTCTCTCGTTCGTTCGCGCTAAAATCCCGTTTTGGCGGAAGTTGTGTAGTGTGCACTAGGCAAATTTTCAAAACCCCC]


>consensus_8098#1 CCGTGTTTTTGTACGCAAACCGGGTAGTCCCAGTTACATATAAATGCTGCTTTTTTCTTA CTTTCTAATTATTACATGTAAAGTAAAAGTCCCCTCACTAAGCAACTAACATGCACTGGT GTGTGCGCACTGCTGCTGCGGCATAGGACGAAATTAGAAATTCCACAAGGCTGGCCCTTT GTTTTGTCTATCGTCCCACATAGTAATACACTTACAACAGTATCGCAAGATAACACATTT TACCGGCATGTTTATTAAAAAACCCAACAACAAAAAACACCTAAAATGTGAGGTTTTATT GTAGTAAAGTCAACCAACAGTAGTCGACAGCAACCGTAGAAGATTTGTCCACGATTTGTC CCATCTTCTTACTCAAAACCTCAAAATGCTAACATGAACTCAACGCTAGCGAAGCATAGT GTAATGTGCAGCTTAGTGCATGCCGACTTGAGTGCGTATAGTGATCGATATAGTACGGAT GAGTTATCGTTTTCTCCGATCAATACCACAGCTCAAAAGTCTTTCTAGTAGTTTGTTGAG AGGTCATCCACGTCCTTGTTGCACTAGCGTAGACTACTAGAACAGTACCGACAGAGGGAA AGCGAGAGAGAGAGAGAAGGAGAGAAAGTGAGCGTTTAGTAGCTCCGTAGACTGCTTAGT GTCCTGGGTCCGAGAAATTAAATGGTAAATTAATTACTACAACTTTCTCCAAATCCCATT TGAGCCAAATTTACTTGTAGAGTCAGCCTCTTGTTAGATTTCTCCCTTTCCTCTTCTCTC GTTCGTTCGCGCTAAAATCCCGTTTTGGCGGAAGTTGTGTAGTGTGCACTAGGCAAATTT TCAAAACCCCC



consensusID : consensus_8098#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 663
fasta sequence
                              [AGAATCGCCACGAGGTTAATGGCCCTGCCGTTACTAACCGTGTATTGTCGGCTTTCTCAGAATGGTTTTCTTAGGTTTNTGTACGCAAACCGGGTAGTCCCAGTTACATAAATGCTGCTTTTTTCTTTCTTTCTAACTATTACATGTAAAACAAAAATCCCCTCACAAAGCAACTAACATGCACTGGTGTGTGCGCACTGCTGCTGCGGCATAGGACGAAATTAGAAATTCCACAAGGGCTGGCCCTTTGTTTTGTCTATCGTCCCACATAGTAATACACTTACAACAGTATCGCAAGATAACACATTTTACCGGCAGTGTTTTATTAAGAAGAACCCGAACAACCAAAAGAANACACCTTAAAATGTGAGGTTTGTAGTTGTAGTAAAGTCAACCAACAGGTAGGTCGACAGCAACCGGTAGAAGATTTGTCCACGATTGTGTCCCATCTTCGTTACTCAATAACCGTCAAAATGCTAAACATGAACTCAACGCGTAGGCGAAGCATAGTGTAAAGTGGTGCAGGCTTAGGTGCATGTCGGGCTTGAGGTGCGGGATCAGGTGATCGAGTATAGTACGGATNGAGTTATCGTNTNCTCCGGATCAAGTGACCACAGGTTGCAAAAGTTCTTCCTCAGGTAGAGTTCAGGTTCGANGAGGTCA]

[+] EMBL BX466635             [AGAATCGCCACGAGGTTAATGGCCCTGCCGTTACTAACCGTGTATTGTCGGCTTTCTCAGAATGGTTTTCTTAGGTTTNTGTACGCAAACCGGGTAGTCCCAGTTACATAAATGCTGCTTTTTTCTTTCTTTCTAACTATTACATGTAAAACAAAAATCCCCTCACAAAGCAACTAACATGCACTGGTGTGTGCGCACTGCTGCTGCGGCATAGGACGAAATTAGAAATTCCACAAGGGCTGGCCCTTTGTTTTGTCTATCGTCCCACATAGTAATACACTTACAACAGTATCGCAAGATAACACATTTTACCGGCAGTGTTTTATTAAGAAGAACCCGAACAACCAAAAGAANACACCTTAAAATGTGAGGTTTGTAGTTGTAGTAAAGTCAACCAACAGGTAGGTCGACAGCAACCGGTAGAAGATTTGTCCACGATTGTGTCCCATCTTCGTTACTCAATAACCGTCAAAATGCTAAACATGAACTCAACGCGTAGGCGAAGCATAGTGTAAAGTGGTGCAGGCTTAGGTGCATGTCGGGCTTGAGGTGCGGGATCAGGTGATCGAGTATAGTACGGATNGAGTTATCGTNTNCTCCGGATCAAGTGACCACAGGTTGCAAAAGTTCTTCCTCAGGTAGAGTTCAGGTTCGANGAGGTCA]


>consensus_8098#2 AGAATCGCCACGAGGTTAATGGCCCTGCCGTTACTAACCGTGTATTGTCGGCTTTCTCAG AATGGTTTTCTTAGGTTTNTGTACGCAAACCGGGTAGTCCCAGTTACATAAATGCTGCTT TTTTCTTTCTTTCTAACTATTACATGTAAAACAAAAATCCCCTCACAAAGCAACTAACAT GCACTGGTGTGTGCGCACTGCTGCTGCGGCATAGGACGAAATTAGAAATTCCACAAGGGC TGGCCCTTTGTTTTGTCTATCGTCCCACATAGTAATACACTTACAACAGTATCGCAAGAT AACACATTTTACCGGCAGTGTTTTATTAAGAAGAACCCGAACAACCAAAAGAANACACCT TAAAATGTGAGGTTTGTAGTTGTAGTAAAGTCAACCAACAGGTAGGTCGACAGCAACCGG TAGAAGATTTGTCCACGATTGTGTCCCATCTTCGTTACTCAATAACCGTCAAAATGCTAA ACATGAACTCAACGCGTAGGCGAAGCATAGTGTAAAGTGGTGCAGGCTTAGGTGCATGTC GGGCTTGAGGTGCGGGATCAGGTGATCGAGTATAGTACGGATNGAGTTATCGTNTNCTCC GGATCAAGTGACCACAGGTTGCAAAAGTTCTTCCTCAGGTAGAGTTCAGGTTCGANGAGG TCA



consensusID : consensus_8098#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 549
fasta sequence
                              [GATCGCCGAGGTATATAGTACGGATGAGTATCGTTTCTCCGATCAATACCACAGTTCAAAATTCTTTCTAGTAGTTTGTTGAGAGGTCATCCACGTCCTTGTTGCACTAGCGTAGACTACTAGAACAGTACCGACAGAGGGAAAGCGAGAGAGAGAGAGAGAGAGAGAGAAGGAGAGAAAGTGAGCGTTTAGTAGCTCCGTA-ACTGCTTAGTGTCCTGGGTGCCGA-AAATTAAATGGTAAATTAATTACTAGAACTCTCTTCAAATCCCATTCGAGCCAAATTTACCTGTAGAGTCAGCCTCTTGTTAGATTTCTCCCTTTCCTCTTCTCTCGTTCGTTCGCGCTAAAATCCCGTTTGGGCGGAAGTTGTGTAGTGTGCACTAGGCAAATTTTCAAAACA-CCGTACTTTCATCCCCGTAGCCCGGAACGTATTGAAAAGAAAGGAACGCCCTTCTTCGATTAATAAAACAAAAATCAACTACACCATGTCGCTGTCGCGGTA-TTTGATCACTGTAGATTGTATTTCCAGTATGTTACATTTGCCATTCG]

[+] EMBL AL693477             [GATCGCCGAGGTATATAGTACGGATGAGTATCGTTTCTCCGATCAATACCACAGTTCAAAATTCTTTCTAGTAGTTTGTTGAGAGGTCATCCACGTCCTTGTTGCACTAGCGTAGACTACTAGAACAGTACCGACAGAGGGAAAGCGAGAGAGAGAGAGAGAGAGAGAGAAGGAGAGAAAGTGAGCGTTTAGTAGCTCCGTA ACTGCTTAGTGTCCTGGGTGCCGA AAATTAAATGGTAAATTAATTACTAGAACTCTCTTCAAATCCCATTCGAGCCAAATTTACCTGTAGAGTCAGCCTCTTGTTAGATTTCTCCCTTTCCTCTTCTCTCGTTCGTTCGCGCTAAAATCCCGTTTGGGCGGAAGTTGTGTAGTGTGCACTAGGCAAATTTTCAAAACA CCGTACTTTCATCCCCGTAGCCCGGAACGTATTGAAAAGAAAGGAACGCCCTTCTTCGATTAATAAAACAAAAATCAACTACACCATGTCGCTGTCGCGGTA TTTGATCACTGTAGATTGTATTTCCAGTATGTTACATTTGC      ]
[+] EMBL BM630195             [                                                                                  ccGGTCATCCACGTCCTTGTTGCACTAGCGTAGACTACTAGAACAGTACCGACAGAGGGAAAGCGAGAGAGAGAGAGAGAGAGAGAGAAGGAGAGAAAGTGAGCGTTTAGTAGCTCCGTAGACTGCTTAGTGTCCTGGGTGCCGAGAAATTAAATGGTAAATTAATTACTAGAACTCTCTTCAAATCCCATTCGAGCCAAATTTACCTGTAGAGTCAGCCTCTTGTTAGATTTCTCCCTTTCCTCTTCTCTCGTTCGTTCGCGCTAAAATCCCGTTTGGGCGGAAGTTGTGTAGTGTGCACTAGGCAAATTTTCAAAACACCCGTACTTTCATCCCCGTAGCCCGGAACGTATTGAAAAGAAAGGAACGCCCTTCTTCGATTAATAAAACAAAAATCAACTACACCATGTCGCTGTCGCGGTATTTTGATCACTGTAGATTGTATTTCCAGTATGTTACATTTGCCATTCG]


>consensus_8098#3 GATCGCCGAGGTATATAGTACGGATGAGTATCGTTTCTCCGATCAATACCACAGTTCAAA ATTCTTTCTAGTAGTTTGTTGAGAGGTCATCCACGTCCTTGTTGCACTAGCGTAGACTAC TAGAACAGTACCGACAGAGGGAAAGCGAGAGAGAGAGAGAGAGAGAGAGAAGGAGAGAAA GTGAGCGTTTAGTAGCTCCGTAACTGCTTAGTGTCCTGGGTGCCGAAAATTAAATGGTAA ATTAATTACTAGAACTCTCTTCAAATCCCATTCGAGCCAAATTTACCTGTAGAGTCAGCC TCTTGTTAGATTTCTCCCTTTCCTCTTCTCTCGTTCGTTCGCGCTAAAATCCCGTTTGGG CGGAAGTTGTGTAGTGTGCACTAGGCAAATTTTCAAAACACCGTACTTTCATCCCCGTAG CCCGGAACGTATTGAAAAGAAAGGAACGCCCTTCTTCGATTAATAAAACAAAAATCAACT ACACCATGTCGCTGTCGCGGTATTTGATCACTGTAGATTGTATTTCCAGTATGTTACATT TGCCATTCG



consensusID : consensus_8098#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 444
fasta sequence
                              [GCACTACGATGGTAACAGCTGTTTTGTATCAACTTTTAATTGGTCGACAGCAACCGTAGAAGATTTGTCCACGATTTGTCCCATCTTCTTACTCAAAACTCAAAATGCTAACATGAACTCAACGCTAGCGAAGCATAGTGTAATGTGCAGCTTATGCCATGTCCGGCTTGAGTGCGGATAGTGATCGATATAAGTTACGGATGAGTTATCCGTTATTACTCCCGAATCAAATAACCCACAAGTTTCAANAATTCCTTTTTCTAAGTTAACGNTTCTGGTGTGACCGAAGGTTCACTTCCCACGTTCTCCCTTTGGTTTGGCACCCTTAAAGGCCGGTTAACGAAACTAACTTAAGGAACAACCAGAGTAACCCCCGCAACCCAGGAAAGCGGGGGANACACNAACGCCCGNAACGCAAGCNAAGGCAGGAAGCAAGCAGGGAAG]

[+] EMBL AL696041             [GCACTACGATGGTAACAGCTGTTTTGTATCAACTTTTAATTGGTCGACAGCAACCGTAGAAGATTTGTCCACGATTTGTCCCATCTTCTTACTCAAAACTCAAAATGCTAACATGAACTCAACGCTAGCGAAGCATAGTGTAATGTGCAGCTTATGCCATGTCCGGCTTGAGTGCGGATAGTGATCGATATAAGTTACGGATGAGTTATCCGTTATTACTCCCGAATCAAATAACCCACAAGTTTCAANAATTCCTTTTTCTAAGTTAACGNTTCTGGTGTGACCGAAGGTTCACTTCCCACGTTCTCCCTTTGGTTTGGCACCCTTAAAGGCCGGTTAACGAAACTAACTTAAGGAACAACCAGAGTAACCCCCGCAACCCAGGAAAGCGGGGGANACACNAACGCCCGNAACGCAAGCNAAGGCAGGAAGCAAGCAGGGAAG]


>consensus_8098#4 GCACTACGATGGTAACAGCTGTTTTGTATCAACTTTTAATTGGTCGACAGCAACCGTAGA AGATTTGTCCACGATTTGTCCCATCTTCTTACTCAAAACTCAAAATGCTAACATGAACTC AACGCTAGCGAAGCATAGTGTAATGTGCAGCTTATGCCATGTCCGGCTTGAGTGCGGATA GTGATCGATATAAGTTACGGATGAGTTATCCGTTATTACTCCCGAATCAAATAACCCACA AGTTTCAANAATTCCTTTTTCTAAGTTAACGNTTCTGGTGTGACCGAAGGTTCACTTCCC ACGTTCTCCCTTTGGTTTGGCACCCTTAAAGGCCGGTTAACGAAACTAACTTAAGGAACA ACCAGAGTAACCCCCGCAACCCAGGAAAGCGGGGGANACACNAACGCCCGNAACGCAAGC NAAGGCAGGAAGCAAGCAGGGAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8098#2      ------------------------------------------------------------
consensus_8098#4      ------------------------------------------------------------
consensus_8098#1      ---CCGTGTTTTTGTACGCAAACCGGGTAGTCCCAGTTACATATAAATGCTGCTTTTTTC 57
consensus_8098#3      ------------------------------------------------------------
consensus_8098#0      CCGCCCACGCGTCCGGGAAGAAGCAAAGAAGGAGAAAAAAAAACAATTGGAGCAACTACG 60
                                                                                  

consensus_8098#2      ------------------------------------------------------------
consensus_8098#4      ------------------------------------------------------------
consensus_8098#1      TTACTTTCTAATTATTACATGTAAAGTAAAAGTCCCCTCACTAAGCAACTAACATGCACT 117
consensus_8098#3      ------------------------------------------------------------
consensus_8098#0      ATGGTAACCAGCTGTTTTGTATCAACTTTTAATTGGTCGAAATTTGTAATTGAATGCGCA 120
                                                                                  

consensus_8098#2      ------------------------------------------------------------
consensus_8098#4      ------------------------------------------------------------
consensus_8098#1      GGTGTGTGCGCACTGCTGCTGCGGCATAGGACGAAATTAGAAATTCCACAAGGCTGGCCC 177
consensus_8098#3      ------------------------------------------------------------
consensus_8098#0      ATTTTGTAAGCAGAAGTGTAGAGAAGCTG--CGGGCCCGGGAGGCAGCGAAGGATGGAGC 178
                                                                                  

consensus_8098#2      ------------------------------------------------------------
consensus_8098#4      ------------------------------------------------------------
consensus_8098#1      TTTGTTTTGTCTATCGTCCCACATAGTAATACACTTACAACAGTATCGCAAGATAACACA 237
consensus_8098#3      ------------------------------------------------------------
consensus_8098#0      GATGTTAAGGAAGCGATG----AAAGCAAAACATTTGAACCCCCAGCCCCAAGAGGGGGA 234
                                                                                  

consensus_8098#2      ------------------------------------------------------------
consensus_8098#4      ------------------------------------------------------------
consensus_8098#1      TTTTACCGGCATGTTTATTAAAAAACCCAACAACAAAAAACACCTAAAATGTGAGGTTTT 297
consensus_8098#3      ------------------------------------------------------------
consensus_8098#0      AG--AGCAGCAGCACAATTAAACAGTATGATCCGCGTCCCCCCGACTCCGGCAGAACTTA 292
                                                                                  

consensus_8098#2      -----AGAATCGCCACGAGGTTAATGGCCCTGCCGTTACTAACCGTGTATTGTCGGCTTT 55
consensus_8098#4      ------------------------------------------------------------
consensus_8098#1      ATTGTAGTAAAGTCAACCAACAGTAGTCGACAGCAACCGTAGAAGATTTGTCCACGATTT 357
consensus_8098#3      ------------------------------------------------------------
consensus_8098#0      ACCGTGGAAGGTGTACACGGGAGAGCGCGGTTGCACTACAGGAACCAAGATGTAAAACAC 352
                                                                                  

consensus_8098#2      CTCAGAATGGTTTTCTTAGGTTTNTGTACGCAAACCGGGTAGTCCCAGTTACATAAATGC 115
consensus_8098#4      ------------------------------------------------------------
consensus_8098#1      GTCCCATCTTCTTACTCAAAACCTCAAAATGCTAACATGAACTCAACGCTAGCGAAGCAT 417
consensus_8098#3      ------------------------------------------------------------
consensus_8098#0      ACACAGGTGGTACACT--AACTTTCTCGACGTTTTTAGCTGTTTGGTGTCTCTTT-GTAT 409
                                                                                  

consensus_8098#2      TGCTTTTTTCTTTCTTTCTAACTATTACATGTAAAACAAAAATCCCCTCACAAAGCAACT 175
consensus_8098#4      -----------------------------------------------GCACTACGATGGT 13
consensus_8098#1      AGTGTAATGTGCAGCTTAGTGCATGCCGACTTGAGTGCGTATAGTGATCGATATAGTACG 477
consensus_8098#3      --------------------------------------GATCGCCGAGGTATATAGTACG 22
consensus_8098#0      ATGTTGATGTGCTAAATTGCAC----CCAGGCAAGGTTGGAGAG-GTCGGCAAGGGTACG 464
                                                                          *       

consensus_8098#2      AACATGCACTGGTGTGTGCGCACTGCTGCTGCGGCATAGGACGAAATTAGAAA--TTCCA 233
consensus_8098#4      AACA---GCTGTTTTGTATCAACTTTTAAT-TGGTCGACAGCAACCGTAGAAGATTTGTC 69
consensus_8098#1      GATGAGTTATCGTTTTCTCCGATCAATACCACAGCTCAAAAGTCTTTCTAGTAGTTTGTT 537
consensus_8098#3      GATGAGT-ATCGTTT-CTCCGATCAATACCACAGTTCAAAATTCTTTCTAGTAGTTTGTT 80
consensus_8098#0      ATCGTG--TTGCGTCCCGCAAGCTAATGCAACAATACATAGGCGACAGATGGAGCACGAT 522
                               *                *          *                      

consensus_8098#2      CAAGGGCTGGCC-CTTTGTTT-TGTCTATCGTCCCACATAGTAATACA-CTTACAACAGT 290
consensus_8098#4      CACGATTTGTCC-CATCTTCT-TACTCAAAACTCAAAATGCTAACATG-AACTCAACGCT 126
consensus_8098#1      GAGAGGTCATCCACGTCCTTG-TTGCACTAGCGTAGACTACTAGAACA-GTACCGACAG- 594
consensus_8098#3      GAGAGGTCATCCACGTCCTTG-TTGCACTAGCGTAGACTACTAGAACA-GTACCGACAG- 137
consensus_8098#0      CGTTTCTGAATTTAATTCTGAACGTCTTTTGTATGGATCAATCCTTTTTCTTTCATCGGG 582
                                     *  *                      *           *  *   

consensus_8098#2      ATCGCAAGATAACACATTTTACCGGCAGTGTTTTATTAAGAA-GAACCCGAACAACCA-A 348
consensus_8098#4      AGCGAAGCATAGTGTAATGTGCAGCTTATGCCATGTCCGGCTTGAGTGCGGATAGTGA-T 185
consensus_8098#1      AGGGAAAGCGAGAGAGAGAGAGA----------AGGAGAGAAAGTGAGCGTTTAGTAGCT 644
consensus_8098#3      AGGGAAAGCGAGAGAGAGAGAGAGAGAGAGAGAAGGAGAGAAAGTGAGCGTTTAGTAGCT 197
consensus_8098#0      GTCGTATCGCGATGAAGTGTGGCG-------TTTTCTAGGAACATACACTTCTTCTAGCA 635
                         * *                                 *        *           

consensus_8098#2      AAGAANACACCTTAAAATGTGAGGTTTGTAG---TTGTAGTAAAGTCAACCAACAGGTAG 405
consensus_8098#4      CGATATA-AGTTACGGATGAGTTATCCGTTA---TTACTCCCGAATCAAATAACCCACAA 241
consensus_8098#1      CCGTAGACTGCTTAGTGTCCTGGGTCCGAGAAATTAAATGGTAAATTAATTACTACAACT 704
consensus_8098#3      CCGTA-ACTGCTTAGTGTCCTGGGTGCCGAAAATTAAATGGTAAATTAATTACTAGAACT 256
consensus_8098#0      AAAGGCGACCTCTACTACTACTAATCTGGTAATTATCTTGGTGGTTTTCATACTTACACT 695
                                              *                    *     *        

consensus_8098#2      GTCGACAGCAACCGGT--AGAAGATTTGTCCACGATTGTGTCCCATCTTCGTTACTCAA- 462
consensus_8098#4      GTT--------TCAAN--AATTCCTTTTTCTAAGTTAACGNTTCTGGT--GTGACCGAAG 289
consensus_8098#1      TTCTCCAAATCCCATTTGAGCCAAATTTACTTGTAGAGTCAGCCTCTTGTTAGATTTCTC 764
consensus_8098#3      CTCTTCAAATCCCATTCGAGCCAAATTTACCTGTAGAGTCAGCCTCTTGTTAGATTTCTC 316
consensus_8098#0      TGCTGTA----TCGTTGTAGATCGTTTACAAAGCGAAGTGTATCTACTTTCTTTTCCCAA 751
                                  *     *      **                *   *            

consensus_8098#2      --TAACCGTCAAAATGCTAAACATGAACTCAACGCGTAGGCGAAGCATAGTGTAAAGTGG 520
consensus_8098#4      GTTCACTTCCCACGTTCTCCCTTTGGTTTG---GCACCCTTAAAGGCCGGTT---AACGA 343
consensus_8098#1      CCTTTCCTCTTCTCTCGTTCGTTCGCGCTAAAATCCCGTTTTGGCGGAAGTT--GTGTAG 822
consensus_8098#3      CCTTTCCTCTTCTCTCGTTCGTTCGCGCTAAAATCCCGTTTGGGCGGAAGTT--GTGTAG 374
consensus_8098#0      CACTGAAACAAAATTTCAATTTACGTCCCCCATCGTTGGAGTATTACAACACAACAACAC 811
                                    *         *                                   

consensus_8098#2      TGCAGGCTTAGGTGCATGTCGGGCTTGAGGTGCG--GGATC-AGGTGATCGAGTATAGTA 577
consensus_8098#4      AACTAACTTAAG-GAACAACCAGAGTAACCCCCG--CAACCCAGGAAAGCGGGGGANACA 400
consensus_8098#1      TGTGCACT-AGGCAAATTTTCAAAACCCCC------------------------------ 851
consensus_8098#3      TGTGCACT-AGGCAAATTTTCAAAACACCGTACTTTCATCCCCGTAGCCCGGAACGTATT 433
consensus_8098#0      TACTCGCTCCTTTTCCTTTCCTA--CGGTGTGTAATGTTGCCTTGTGAGATGTTTCAATG 869
                            **                                                    

consensus_8098#2      CGGATNGAGTTATCGTNTNCTCCGG-ATCAAGTGACCACAGGTTGCAAAAGTTCTTCCTC 636
consensus_8098#4      CNAACGCCCGNAACGCAAGCNAAGGCAGGAAGCAAGCAGGGAAG---------------- 444
consensus_8098#1      ------------------------------------------------------------
consensus_8098#3      GAAAAGAAAGGAACGCCCTTCTTCG-ATTAATAAAACAAAAATCAACTACACCATGTCGC 492
consensus_8098#0      TGTACAGTAACAGTGGACAGGTGGATGAAAAAACACGAATAAAAGTGGAAATAATTACAG 929
                                                                                  

consensus_8098#2      AGGTAGAGTTCAGGTTCGANGAGGTCA------------------------------ 663
consensus_8098#4      ---------------------------------------------------------
consensus_8098#1      ---------------------------------------------------------
consensus_8098#3      TGTCGCGGTATTTGATCACTGTAGATTGTATTTCCAGTATGTTACATTTGCCATTCG 549
consensus_8098#0      AATTGGTGCTTTGCAATGAGAAAGACGGACGGGATTGGGGAGGC------------- 973
                                                                               




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)