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Anopheles gambiae
cluster # 8137 cluster # 8137       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8137#0 length = 1660 sequences # 7  
consensus_8137#1 length = 721 sequences # 1  
consensus_8137#2 length = 579 sequences # 1  

consensusID : consensus_8137#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1660
fasta sequence
                              [CCGTACGACTGAATCGACACTGCGCACGATGCTGTCGGAGGCGACGGTTCGGGAGGACTTCGAGCGCATCCGGTCGGATGCACGGTACGAGAACCTGTTCGAGCCCCGCTCCTGGGACGTCATTATCCGCATCCTGGCCCCGCCCGAGGACGTCGAGCTGCGCCAGTCGAAGCGCAGCAAGAAGCGCGAAACCTGGGACACACGCTCCCGCCGC-GCTCGCTGCCG--GCTGTACGAGTACGACAGCGATGGCGATTCGTCCGTGCGTACGATCACGCAGGAGCCGCAGCTGGTGGCGGCGACCACCAATCTCGCGTACGGTGCCCATGCCGGCTCGCTCGCTAGTGGATCGCGGTCGCGCCGTACCTCCCGCTCGTCCTACAACTCGAACAACATCGACATGCGCTCCATGTCGGAGGTGATCGTGGACTTTGGGCGGATGGCGGGTGGACCGGGCCGGTCGGGCAGCGGTGGCGAACCGTCGGAGGAGGGCAGCTCGTACATTGTGTCGCACAGCAAGGCCTACTTCGATGATGATGATGAGGACGAGGAGGATCAGCGGTACGATCAGCGGTCGCTGCAGCGATCGCTAAGCCATCCGAGCTTGGCCCGATCGGCGAGCGAGTTTACGGAGCGTTGGATCATCCCGGAGGACCATATGGATCTGCGCGCAGACTCGGAGGTGAACAATTCGTCCATGTACGGCTCGGGCACGATGGATGTGGACACGCGGACGACCTACATCAAGCAGAGTCGCACGATGGTGAGCCGTGAACGGCGCGACAACTGGTAGATGAAGAGAAGGAGCGAACTCAACGCTGTGCTCCTCTCTCCATCT-CGCCACTCTCTCTCTAATCTCACGTGCCAAGTCTCCGATCGGTTTGCTCGCCTCAGAAAAACACACTACTCAGCCCCATGGATTACTACTGCCCACTAACACTAACACTGCTAAACTGATACCGTTTTGCTGTAGGGAGAAACTGCTGAGGTGTAAGTGCGACCGATCGGGCAACAAATGTGAATCCCTGCCCGTATTTTTTTTTGCAAATGGCGACAGCATGAACACACGAATTGAGTGAGTGCTGCTCCCGGAAGCTTGCGATAAAGTAGACCAATAAGCGTAGTAGATTAGATCGGATCTGTTTTGTATGGTACTGGTAGGAATGCCACCATCAACAGCGCAACCGTTTTACTCCGAATAACAATTAGCCAATAGCACTAGCGACGTTCGACCAGGGACGCGCTTGGCGACGATATAATGATTAATAATTTTAATTTTAACCACACAT----ACACACACACTCACACACTTCGAAAGTACCACAGGAGCGGAACGAACCCGGGAGCCTGAGGTGTCCCGGTGCCTGTGATAAGCGAATGAAATTCTCGGCATTACGGTGCTGAACCGGAGCAGGAGGCGTCAGCAAGGATATTAGTGTGTCACACCGTGTTTTAGCATTTCGCATACATTTCGCAACACCAGATCGTGACCGTTCCGTCGTATTGGTGGAGCAACTTAGAACGTTCACTAGATCGGATCGCGTAATTCACAGCTTAAGTGGTGGAGGTTTCAAAACGACAAAATAAAAATGGGGAAATGATTTTATGCTTTTATACNAACTACCGCATTAGTATGTAGGGAANAAGCTTGATAATTACAGTCTCC]

[+] EMBL BM609401             [CCGTACGACTGAATCGACACTGCGCACGATGCTGTCGGAGGCGACGGTTCGGGAGGACTTCGAGCGCATCCGGTCGGATGCACGGTACGAGAACCTGTTCGAGCCCCGCTCCTGGGACGTCATTATCCGCATCCTGGCCCCGCCCGAGGACGTCGAGCTGCGCCAGTCGAAGCGCAGCAAGAAGCGCGAAACCTGGGACACACGCTCCCGCCGCAGCTCGCTGCCGACGCTGTACGAGTACGACAGCGATGGCGATTCGTCCGTGCGTACGATCACGCAGGAGCCGCAGCTGGTGGCGGCGACCACCAATCTCGCGTACGGTGCCCATGCCGGCTCGCTCGCTAGTGGATCGCGGTCGCGCCGTACCTCCCGCTCGTCCTACAACTCGAACAACATCGACATGCGCTCCATGTCGGAGGTGATCGTGGACTTTGGGCGGATGGCGGGTGGACCGGGCCGGTCGGGCAGCGGTGGTGAACCGTCGGAGGAGGGCAGCTCGTACATTGTGTCGCACAGCAAGGCCTACTTCGATGATGATGATGACGACGAGGAGGATCAGCGATACGATCAGCGGTCGCTGCAGCGATCGCTAAGCCATCCGAGCTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM648633             [                                                                                                                                                                                                                  CCGC CCACGCGTCCG  GCTGTACGAGTACGACAGCGATGGCGATTCGTCCGTGCGTACGATCACGCAGGAGCCGCAGCTGGTGGCGGCGACCACCAATCTCGCGTACGGCGCCCATGCCGGTTCGCTCGCTAGTGGATCGCGGTCGCGCCGTACCTCCCGCTCGTCCTACAACTCGAACAACATCGACATGCGCTCCATGTCGGAGGTGATCGTGGACTTTGGGCGGATGGCGGGTGGACCGGGCCGGTCGGGCAGCGGTGGCGAACCGTCGGAGGAGGGCAGCTCGTACATTGTGTCGCACAGCAAGGCCTACTTCGATGATGATGATGACGACGAGGAGGATCAGCGGTACGATCAGCGGTCGCTGCAGCGATCGCTAAGCCATCCGAGCTTGGCCCGATCGGCCAGCGAGTTTACGGAGCGTTGGATCATCCCGGAGGACCATATGGATCTGCGCGCTGACTCGGAGGTGAACAATTCGTCCATGTACGGCTCGGGCACGATGGATGTGGACACGCGGACGACCTACATCAAGCAGAGTCGCACGATGGTGAGCCGTGAACGGCGCGACAATTGGTAGATGAAGCGAAGGA  GTACTCGCCATTGTGCTCCTCTCTCCATTTCCCCCACTCTCTCTCTAATCTCACGTGCCAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX604989             [                                                                                                                                                                                                                                                                                                                                               CGCTCGCTAGTGGATCGCGGTCGCCCTTTACCTCCCGCTCGTCCTACAACTCGAACAACATCGACATGCGCTCCATGTCGGAGGTGATCGTGGACTTTGGGCGGATGGCGGGTGGACCGGGCCGGTCGGGCAGCGGTGGCGAACCGTCGGAGGAGGGCAGCTCGTACATTGTGTCGCACAGCAAGGCCTACTTCGATGATGATGATGAGGACGAGGAGGATCAGCGGTACGATCAGCGGTCGCTGCAGCGATCGCTAAGCCATCCGAGCTTGGCCCGATCGGCGAGCGAGTTTACGGAGCGTTGGATCATCCCGGAGGACCATATGGATCTGCGCGCAGACTCGGAGGTGAACAATTCGTCCATGTACGGCTCGGGCACGATGGATGTGGACACGCGGACGACCTACATCAAGCAGAGTCGCACGATGGTGAGCCGTGAACGGCGCGACAACTGGTAGATGAAGAGAAGGAGCGAACTCAACGCTGTGCTCCTCTCTCCATCT CGCCACTCTCTCTCTAATCTCACGTGCCAAGTCTCCGATCGGTTTGCTCGCCTCAGAAAAACACACTACTCAGCCCCATGGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX607683             [                                                                                                                                                                                                                                                                                                                                                                                   GCTCGTCCTACAACTCGAACAACATCGACATGCGCTCCATGTCGGAGGTGATCGTGGACTTTGGGCGGATGGCGGGTGGACCGGGCCGGTCGGGCAGCGGTGGCGAACCGTCGGAGGAGGGCAGCTCGTACATTGTGTCGCACAGCAAGGCCTACTTCGATGATGATGATGAGGACGAGGAGGATCAGCGGTACGATCAGCGGTCGCTGCAGCGATCGCTAAGCCATCCGAGCTTGGCCCGATCGGCGAGCGAGTTTACGGAGCGTTGGATCATCCCGGAGGACCATATGGATCTGCGCGCAGACTCGGAGGTGAACAATTCGTCCATGTACGGCTCGGGCACGATGGATGTGGACACGCGGACGACCTACATCAAGCAGAGTCGCACGATGGTGAGCCGTGAACGGCGCGACAACTGGTAGATGAAGAGAAGGAGCGAACTCAACGCTGTGCTCCTCTCTCCATCT CGCCACTCTCTCTCTAATCTCACGTGCCAAGTCTCCGATCGGTTTGCTCGCCTCAGAAAAACACACTACTCAGCCCCATGGATTACTACTGCCCACTAACACTAACACTGCTAAACTGATACCGTTTTGCTGTAGGGAGAAACTGCTGAGGTGTAAGTGCGACCGATCGGGCAACAAATGTGAATCCCTGCCCGTATTTTTTTTTGCAAATGGCGACAGCATGAACACACGAATTGAGTGAGTGCTGCTCCCGGAAGCTTGCGATAAAGTAGACCAATAAGCGTAGTAGATTAGATCGGATCTGTTTTGTATGGTACTGGTAGGAATGCCACCATCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX603065             [                                                                                                                                                                                                                                                                                                                                                                                                                   CGCTCCATGTCGGAGGTGATCGTGGACTTTGGGCGGATGGCGGGTGGACCGGGCCGGTCGGGCAGCGGTGGCGAACCGTCGGAGGAGGGCAGCTCGTACATTGTGTCGCACAGCAAGGCCTACTTCGATGATGATGATGAGGACGAGGAGGATCAGCGGTACGATCAGCGGTCGCTGCAGCGATCGCTAAGCCATCCGAGCTTGGCCCGATCGGCGAGCGAGTTTACGGAGCGTTGGATCATCCCGGAGGACCATATGGATCTGCGCGCAGACTCGGAGGTGAACAATTCGTCCATGTACGGCTCGGGCACGATGGATGTGGACACGCGGACGACCTACATCAAGCAGAGTCGCACGATGGTGAGCCGTGAACGGCGCGACAACTGGTAGATGAAGAGAAGGAGCGAACTCAACGCTGTGCTCCTCTCTCCATCT CGCCACTCTCTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX610121             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTGGTAGATGAAGAGAAGGAGCGAACTCAACGCTGTGCTCCTCTCTCCATCT CGCCACTCTCTCTCTAATCTCACGTGCCAAGTCTCCGATCGGTTTGCTCG CTCAGAAAAACACACTACTCAGCCCCATGGATTACTACTGCCCACTAACACTAACACTGCTAAACTGATACCGTTTTGCTGTAGGGAGAAACTGCTGAGGTGTAAGTGCGACCGATCGGGCAACAAATGTGAATCCCTGCCCGTATTTTTTTTTGCAAATGGCGACAGCATGAACACACGAATTGAGTGAGTGCTGCTCCCGGAAGCTTGCGATAAAGTAGACCAATAAGCGTAGTAGATTAGATCGGATCTGTTTTGTATGGTACTGGTAGGAATGCCACCATCAACAGCGCAACCGTTTTACTCCGAATAACAATTAGCCAATAGCACTAGCGACGTTCGACCAGGGACGCGCTTGGCGACGATATAATGATTAATAATTTTAATTTTAACCACACAT    ACACACACACTCACACACTTCGAAAGTACCACAGGAGCGGAACGAACCCGGGAGCCTGAGGTGTCCCGGTGCCTGTGATAAGCGAATGAAATTCTCGGCATTACGGTGCTGAACCGGAGCAGGAGGCG                                                                                                                                                                                                                                                      ]
[+] EMBL BX625949             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      gagtACTCGCCATTGTGCTCCTCTCTCCATTT CCCCACTCTCTCTCTAATCTCACGTGCCAAGTCTCCGATCGGTTTGCTCACCTCAGAAAAACACACTACTCAGCCCCATGGATTACTACTGCCCACTAACACTAACACTGCTAAACTGATACCG ACTGCTGTAGGGAGAAACTGCTGAGGTGTGAGTGCGACCGATCGGGCAACAAATGTGAATCCCTGCCCGTA TTTTTTTTGCAAATGGCGACAGCATGAACACACGAATTGAGTGAGTGCTGCTCCCGGAAGCTTGCGATAAAGTAGACCAATAAGCGTAGTAGATTAGATCGGATCTGTTTTGTATGGTACTGGTAGGAATGCCACCATCAACAGCGCAACCGTTTTACTCCGAATAACAATTAGCAAATAGCACTAGCGACGTTCGACCAGGGACGCACTTGGCGACGATATACTGATTAATAATTTTAATTTTAACCACACATACACACACACACACTCACACACTTCGAAAGTACCACAGGAGCGGAACGAACCCGGGAGCCTGAGGTGTCCTGGCGCCTGTGATAAGCGAATAAAATTCTCGGCATTACGGTGCTGAACCGGAGCAGGAGGCGTCAGCAAGGATATTAGTGTGTCACACCGTGTTTTAGCATTTCGCATACATTTCGCAACACCAGATCGTGACCGTTCCGTCGTATTGGTGGAGCAACTTAGAACGTTCACTAGATCGGATCGCGTAATTCACAGCTTAAGTGGTGGAGGTTTCAAAACGACAAAATAAAAATGGGGAAATGATTTTATGCTTTTATACNAACTACCGCATTAGTATGTAGGGAANAAGCTTGATAATTACAGTCTCC]


>consensus_8137#0 CCGTACGACTGAATCGACACTGCGCACGATGCTGTCGGAGGCGACGGTTCGGGAGGACTT CGAGCGCATCCGGTCGGATGCACGGTACGAGAACCTGTTCGAGCCCCGCTCCTGGGACGT CATTATCCGCATCCTGGCCCCGCCCGAGGACGTCGAGCTGCGCCAGTCGAAGCGCAGCAA GAAGCGCGAAACCTGGGACACACGCTCCCGCCGCGCTCGCTGCCGGCTGTACGAGTACGA CAGCGATGGCGATTCGTCCGTGCGTACGATCACGCAGGAGCCGCAGCTGGTGGCGGCGAC CACCAATCTCGCGTACGGTGCCCATGCCGGCTCGCTCGCTAGTGGATCGCGGTCGCGCCG TACCTCCCGCTCGTCCTACAACTCGAACAACATCGACATGCGCTCCATGTCGGAGGTGAT CGTGGACTTTGGGCGGATGGCGGGTGGACCGGGCCGGTCGGGCAGCGGTGGCGAACCGTC GGAGGAGGGCAGCTCGTACATTGTGTCGCACAGCAAGGCCTACTTCGATGATGATGATGA GGACGAGGAGGATCAGCGGTACGATCAGCGGTCGCTGCAGCGATCGCTAAGCCATCCGAG CTTGGCCCGATCGGCGAGCGAGTTTACGGAGCGTTGGATCATCCCGGAGGACCATATGGA TCTGCGCGCAGACTCGGAGGTGAACAATTCGTCCATGTACGGCTCGGGCACGATGGATGT GGACACGCGGACGACCTACATCAAGCAGAGTCGCACGATGGTGAGCCGTGAACGGCGCGA CAACTGGTAGATGAAGAGAAGGAGCGAACTCAACGCTGTGCTCCTCTCTCCATCTCGCCA CTCTCTCTCTAATCTCACGTGCCAAGTCTCCGATCGGTTTGCTCGCCTCAGAAAAACACA CTACTCAGCCCCATGGATTACTACTGCCCACTAACACTAACACTGCTAAACTGATACCGT TTTGCTGTAGGGAGAAACTGCTGAGGTGTAAGTGCGACCGATCGGGCAACAAATGTGAAT CCCTGCCCGTATTTTTTTTTGCAAATGGCGACAGCATGAACACACGAATTGAGTGAGTGC TGCTCCCGGAAGCTTGCGATAAAGTAGACCAATAAGCGTAGTAGATTAGATCGGATCTGT TTTGTATGGTACTGGTAGGAATGCCACCATCAACAGCGCAACCGTTTTACTCCGAATAAC AATTAGCCAATAGCACTAGCGACGTTCGACCAGGGACGCGCTTGGCGACGATATAATGAT TAATAATTTTAATTTTAACCACACATACACACACACTCACACACTTCGAAAGTACCACAG GAGCGGAACGAACCCGGGAGCCTGAGGTGTCCCGGTGCCTGTGATAAGCGAATGAAATTC TCGGCATTACGGTGCTGAACCGGAGCAGGAGGCGTCAGCAAGGATATTAGTGTGTCACAC CGTGTTTTAGCATTTCGCATACATTTCGCAACACCAGATCGTGACCGTTCCGTCGTATTG GTGGAGCAACTTAGAACGTTCACTAGATCGGATCGCGTAATTCACAGCTTAAGTGGTGGA GGTTTCAAAACGACAAAATAAAAATGGGGAAATGATTTTATGCTTTTATACNAACTACCG CATTAGTATGTAGGGAANAAGCTTGATAATTACAGTCTCC



consensusID : consensus_8137#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 721
fasta sequence
                              [TCAGCAGATNCCCGAGGTTAAGGACATATTGATCTGGCGCAGATNTGAGGTTAACAATTCGTCCATGTACGGCTCGGGCACGATGGATGTTGACACGCGGACGACCTACATCAAGCAGAGTCGCACGATGGTGAGCCGTGAACGGGCGACAACTGGTAGATGAAGAGAANGAGCGAACTCAACGCTGTGCTCCTCTCTCATCTCGCATCTCTCTCTAATTCAGTGCCAAGTCTCGATGGTGTCGCTGGNNAAATATCAGGACATGGATTACTAACTGCCACTAAACANTAACACGTGCNTAAAACTGCATACCGNATTGNTTGTACGGAGAACTTGCCGGAGGTGTAAAGTGGAGACCCGATCGGGGCACAACAATGTGAATTCCCTGNCCGNTCATTTTATTACTGCAAAATGGGCGACACGGAATGATNAACCAACACTCAAATTTTGAGCTGANATTGCCTGCTTCCCGGNCAGGCCTTGCGGAATAAAAGATAAGANACACAATACAAGACGGTANGTAGAAANTAAGAATTCAGGNATNCTGNAAGGTAATTGGTANNATGGGTAGNGGAAATTNCACAGCCCNTTCAAAATGGGACACCCGTTATNANTANCGNGACATAACAGNAATNAGCCAAGTCANCCACTAACNGAACGGTCAGCTACCCANAGGGAAGTTCCNTTGCGGCAATATATATGATTACTAATTNTAATAATA]

[+] EMBL AL696112             [TCAGCAGATNCCCGAGGTTAAGGACATATTGATCTGGCGCAGATNTGAGGTTAACAATTCGTCCATGTACGGCTCGGGCACGATGGATGTTGACACGCGGACGACCTACATCAAGCAGAGTCGCACGATGGTGAGCCGTGAACGGGCGACAACTGGTAGATGAAGAGAANGAGCGAACTCAACGCTGTGCTCCTCTCTCATCTCGCATCTCTCTCTAATTCAGTGCCAAGTCTCGATGGTGTCGCTGGNNAAATATCAGGACATGGATTACTAACTGCCACTAAACANTAACACGTGCNTAAAACTGCATACCGNATTGNTTGTACGGAGAACTTGCCGGAGGTGTAAAGTGGAGACCCGATCGGGGCACAACAATGTGAATTCCCTGNCCGNTCATTTTATTACTGCAAAATGGGCGACACGGAATGATNAACCAACACTCAAATTTTGAGCTGANATTGCCTGCTTCCCGGNCAGGCCTTGCGGAATAAAAGATAAGANACACAATACAAGACGGTANGTAGAAANTAAGAATTCAGGNATNCTGNAAGGTAATTGGTANNATGGGTAGNGGAAATTNCACAGCCCNTTCAAAATGGGACACCCGTTATNANTANCGNGACATAACAGNAATNAGCCAAGTCANCCACTAACNGAACGGTCAGCTACCCANAGGGAAGTTCCNTTGCGGCAATATATATGATTACTAATTNTAATAATA]


>consensus_8137#1 TCAGCAGATNCCCGAGGTTAAGGACATATTGATCTGGCGCAGATNTGAGGTTAACAATTC GTCCATGTACGGCTCGGGCACGATGGATGTTGACACGCGGACGACCTACATCAAGCAGAG TCGCACGATGGTGAGCCGTGAACGGGCGACAACTGGTAGATGAAGAGAANGAGCGAACTC AACGCTGTGCTCCTCTCTCATCTCGCATCTCTCTCTAATTCAGTGCCAAGTCTCGATGGT GTCGCTGGNNAAATATCAGGACATGGATTACTAACTGCCACTAAACANTAACACGTGCNT AAAACTGCATACCGNATTGNTTGTACGGAGAACTTGCCGGAGGTGTAAAGTGGAGACCCG ATCGGGGCACAACAATGTGAATTCCCTGNCCGNTCATTTTATTACTGCAAAATGGGCGAC ACGGAATGATNAACCAACACTCAAATTTTGAGCTGANATTGCCTGCTTCCCGGNCAGGCC TTGCGGAATAAAAGATAAGANACACAATACAAGACGGTANGTAGAAANTAAGAATTCAGG NATNCTGNAAGGTAATTGGTANNATGGGTAGNGGAAATTNCACAGCCCNTTCAAAATGGG ACACCCGTTATNANTANCGNGACATAACAGNAATNAGCCAAGTCANCCACTAACNGAACG GTCAGCTACCCANAGGGAAGTTCCNTTGCGGCAATATATATGATTACTAATTNTAATAAT A



consensusID : consensus_8137#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 579
fasta sequence
                              [GCAAGAATNGCCCCGAGGTCTTAGTGTGTCTGGCGCCTGTGATAAGCGAATAAATTCTCGGCATTACGTGTGCTGAACCGGAGCAGGAGGCGTCAGCAAGGATATTAGTGTGTCACACCGTGTTTTAGCATTTCGGTGCTGAACCTGGAGCAGTGAGTGCTGTCAGCAAGGATATTAGTTGTGTCACACCTGTGTTTTAGCATTTCGCATACATTTCTGCAACACCAGATCTGTGACCTGTTCCGTCGTATTGGTGGAGCAACTTAGAACTGTTCACTAGATCAGATCTGCTGTAATTCACAGCTTAAGTGGTGGAGGTTTCAAAACGACAAAATAAAAATGGGGAATGATTTTATGCTTTTATACAAACTACCTGCGATTAGTATGTAGTGGAAGAAGCTTGATAATTACAGTCTCACACATGACCCGAGATACTGCCTGTTGGGGTGGTGGAGGAGTCGTCCTTGCCCTTGCTTGAAGACTCGCTGAATAAAACTAACCAATACGTCTCACACGAAGAAACAGAGANAAATCAAGAAGAANAACAAAGATACAAACNNAAAACAAAGAACAAGGGCG]

[+] EMBL AL931474             [GCAAGAATNGCCCCGAGGTCTTAGTGTGTCTGGCGCCTGTGATAAGCGAATAAATTCTCGGCATTACGTGTGCTGAACCGGAGCAGGAGGCGTCAGCAAGGATATTAGTGTGTCACACCGTGTTTTAGCATTTCGGTGCTGAACCTGGAGCAGTGAGTGCTGTCAGCAAGGATATTAGTTGTGTCACACCTGTGTTTTAGCATTTCGCATACATTTCTGCAACACCAGATCTGTGACCTGTTCCGTCGTATTGGTGGAGCAACTTAGAACTGTTCACTAGATCAGATCTGCTGTAATTCACAGCTTAAGTGGTGGAGGTTTCAAAACGACAAAATAAAAATGGGGAATGATTTTATGCTTTTATACAAACTACCTGCGATTAGTATGTAGTGGAAGAAGCTTGATAATTACAGTCTCACACATGACCCGAGATACTGCCTGTTGGGGTGGTGGAGGAGTCGTCCTTGCCCTTGCTTGAAGACTCGCTGAATAAAACTAACCAATACGTCTCACACGAAGAAACAGAGANAAATCAAGAAGAANAACAAAGATACAAACNNAAAACAAAGAACAAGGGCG]


>consensus_8137#2 GCAAGAATNGCCCCGAGGTCTTAGTGTGTCTGGCGCCTGTGATAAGCGAATAAATTCTCG GCATTACGTGTGCTGAACCGGAGCAGGAGGCGTCAGCAAGGATATTAGTGTGTCACACCG TGTTTTAGCATTTCGGTGCTGAACCTGGAGCAGTGAGTGCTGTCAGCAAGGATATTAGTT GTGTCACACCTGTGTTTTAGCATTTCGCATACATTTCTGCAACACCAGATCTGTGACCTG TTCCGTCGTATTGGTGGAGCAACTTAGAACTGTTCACTAGATCAGATCTGCTGTAATTCA CAGCTTAAGTGGTGGAGGTTTCAAAACGACAAAATAAAAATGGGGAATGATTTTATGCTT TTATACAAACTACCTGCGATTAGTATGTAGTGGAAGAAGCTTGATAATTACAGTCTCACA CATGACCCGAGATACTGCCTGTTGGGGTGGTGGAGGAGTCGTCCTTGCCCTTGCTTGAAG ACTCGCTGAATAAAACTAACCAATACGTCTCACACGAAGAAACAGAGANAAATCAAGAAG AANAACAAAGATACAAACNNAAAACAAAGAACAAGGGCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8137#0      CCGTACGACTGAATCGACACTGCGCACGATGCTGTCGGAGGCGACGGTTCGGGAGGACTT 60
consensus_8137#1      ------------------------------------------------------------
consensus_8137#2      ------------------------------------------------------------
                                                                                  

consensus_8137#0      CGAGCGCATCCGGTCGGATGCACGGTACGAGAACCTGTTCGAGCCCCGCTCCTGGGACGT 120
consensus_8137#1      ------------------------------------------------------------
consensus_8137#2      ------------------------------------------------------------
                                                                                  

consensus_8137#0      CATTATCCGCATCCTGGCCCCGCCCGAGGACGTCGAGCTGCGCCAGTCGAAGCGCAGCAA 180
consensus_8137#1      ------------------------------------------------------------
consensus_8137#2      ------------------------------------------------------------
                                                                                  

consensus_8137#0      GAAGCGCGAAACCTGGGACACACGCTCCCGCCGCGCTCGCTGCCGGCTGTACGAGTACGA 240
consensus_8137#1      ------------------------------------------------------------
consensus_8137#2      ------------------------------------------------------------
                                                                                  

consensus_8137#0      CAGCGATGGCGATTCGTCCGTGCGTACGATCACGCAGGAGCCGCAGCTGGTGGCGGCGAC 300
consensus_8137#1      ------------------------------------------------------------
consensus_8137#2      ------------------------------------------------------------
                                                                                  

consensus_8137#0      CACCAATCTCGCGTACGGTGCCCATGCCGGCTCGCTCGCTAGTGGATCGCGGTCGCGCCG 360
consensus_8137#1      ------------------------------------------------------------
consensus_8137#2      ------------------------------------------------------------
                                                                                  

consensus_8137#0      TACCTCCCGCTCGTCCTACAACTCGAACAACATCGACATGCGCTCCATGTCGGAGGTGAT 420
consensus_8137#1      ------------------------------------------------------------
consensus_8137#2      ------------------------------------------------------------
                                                                                  

consensus_8137#0      CGTGGACTTTGGGCGGATGGCGGGTGGACCGGGCCGGTCGGGCAGCGGTGGCGAACCGTC 480
consensus_8137#1      ------------------------------------------------------------
consensus_8137#2      ------------------------------------------------------------
                                                                                  

consensus_8137#0      GGAGGAGGGCAGCTCGTACATTGTGTCGCACAGCAAGGCCTACTTCGATGATGATGATGA 540
consensus_8137#1      ------------------------------------------------------------
consensus_8137#2      ------------------------------------------------------------
                                                                                  

consensus_8137#0      GGACGAGGAGGATCAGCGGTACGATCAGCGGTCGCTGCAGCGATCGCTAAGCCATCCGAG 600
consensus_8137#1      ------------------------------------------------------------
consensus_8137#2      ------------------------------------------------------------
                                                                                  

consensus_8137#0      CTTGGCCCGATCGGCGAGCGAGTTTACGGAGCGTTGGATCATCCCGG---AGGACCATAT 657
consensus_8137#1      ------------------------------TCAGCAGATNCCCGAGGT-TAAGGACATAT 29
consensus_8137#2      -----------------------------GCAAGAATNGCCCCGAGGTCTTAGTGTGTCT 31
                                                                *  **     *    * *

consensus_8137#0      GGATCTGCGCGCAGACTCGGAGGTGAACAATTCGTCCATGTACGGCTCGGGCACGATGGA 717
consensus_8137#1      TGATCTG-GCGCAGA-TNTGAGGTTAACAATTCGTCCATGTACGGCTCGGGCACGATGGA 87
consensus_8137#2      GGCGCCTGTGATAAGCGAATAAATTCTCGGCAT-TACGTGTGCTGAACCGGAGCAGGAGG 90
                       *  *       *       *  *   *      * * *** * *  * **  *    * 

consensus_8137#0      TGTGGACACGCGGACGACCTACATCAAGCAGAGTCGCACGATGGTGA-GCCGTGAACGGC 776
consensus_8137#1      TGTTGACACGCGGACGACCTACATCAAGCAGAGTCGCACGATGGTGA-GCCGTGAACGG- 145
consensus_8137#2      CGTCAGCAAGGATATTAG-TGTGTCACACCGTGTTTTAGCATTTCGGTGCTGAACCTGGA 149
                       **   ** *   *  *  *   ***  * * **   *  **   *  ** *     ** 

consensus_8137#0      GCGACAACTGGTAGATGAAGAGA-AGGAGCGAACTCAACGCTGTGCTCCTCTCTCCATCT 835
consensus_8137#1      GCGACAACTGGTAGATGAAGAGA-ANGAGCGAACTCAACGCTGTGCTCCTCTCTC-ATCT 203
consensus_8137#2      GCAGTGAGTGCTGTCAGCAAGGATATTAGTTGTGTCACACCTGTGTTTTAGC----ATTT 205
                      **    * ** *    * *  ** *  **     ***   ***** *         ** *

consensus_8137#0      CGCCACTCTCTCTCTAATCTCACGTGCCAAGTCTCCGATCGGTTTGCTCGCCTCAGAAAA 895
consensus_8137#1      CGCA--TCTCTCTCTAAT-TCA-GTGCCAAGTCTC-GATGGTGTCGCT------GGNNAA 252
consensus_8137#2      CGCATACATTTCTGCAAC-------ACCAGATCTGTGACCTGTTCCGTCGTATTGGTGGA 258
                      ***     * ***  **         ***  ***  **     *   *       *   *

consensus_8137#0      ACACACTACTCAGCCCCATGGATTACTACTGCCCACTAA-CACTAACAC-TGCT--AAAC 951
consensus_8137#1      ATA------TCAGGAC-ATGGATTACTAACTGCCACTAAACANTAACACGTGCNTAAAAC 305
consensus_8137#2      GCA-----------ACTTAGAACTGTT------CACTAG---ATCAGATCTGCT------ 292
                        *            *   * * *  *      *****     * * *  ***       

consensus_8137#0      TG-ATACCGTTTTGCT-GTAGGGAGAAACTGCTG-AGGTGTAAGTGCGA---CCGATCGG 1005
consensus_8137#1      TGCATACCGNATTGNTTGTACGGAGAACTTGCCGGAGGTGTAAAGTGGAGACCCGATCGG 365
consensus_8137#2      ---GTAATTCACAGCTTAAGTGGTGGAGGTTTCAAAACGACAAAATAAA------AATGG 343
                          **       * *     ** * *  *     *     **     *      *  **

consensus_8137#0      GCAACAA--ATGTGAAT-CCCTGCCCGTATTTTTTTTTGCAAATGGCGACAGCATGAAC- 1061
consensus_8137#1      GGCACAACAATGTGAATTCCCTGNCCGNTCATTTTATTACT-------GCAAAATGGGCG 418
consensus_8137#2      GGAATGATTTTATGCTTTTATACAAACTACCTGCGATTAGTATGTAGTGGAAGAAGCTTG 403
                      *  *  *   * **  *              *    **            *  * *    

consensus_8137#0      ACACGAATTGAGTGAG-TGCTGCTCCCGGAAGCTTGCGATAAAGTAGACCAATAAGCGTA 1120
consensus_8137#1      ACACGGAATGATNAAC-CAACACTC---AAATTTTGAGCTGANATTGCCTGCTTCCCGGN 474
consensus_8137#2      ATAATTACAGTCTCACACATGACCCGAGATACTGCCTGTTGGGGTGGTGGAGGAGTCGTC 463
                      * *   *  *    *       * *     *      * *    * *         **  

consensus_8137#0      GTAGATTAG----ATCGGATCTGTTTTGTATGGTACTGGTAGGAATGCCACCATCAACAG 1176
consensus_8137#1      CAGGCCTTGCGGAATAAAAGATAAGANACACAATACAAGACGGTANGTAGAAANTAAGAA 534
consensus_8137#2      CTTGCCCTT---GCTTGAAGACTCGCTGAATAAAACTAACCAATACGTCTCACACGAAGA 520
                         *          *   *          *    **        * *         *   

consensus_8137#0      CGCAACCGTTTTACTCCGAATAACAATTAGCCAATAGCACTAGCGACGTTCGACCAGGGA 1236
consensus_8137#1      TTCAGGNATNCT-----GNAAGGTAATTGGT-ANNATGGGTAGNGGAAATTNCACAGC-- 586
consensus_8137#2      AACAGAGANAAA-----TCAAGAAGAANAACAAAGATACA-AACNNAAAACAAAGAACAA 574
                        **               *     *      *  *     *             *    

consensus_8137#0      CGCGCTTGGCGACGATATAATGATTAATAATTTTAATTTTAACCACACATACACACACAC 1296
consensus_8137#1      --CCNTTCAAAATGGGACACCCGTTATNANTANCGNGAC--ATAACAGNAATNAGCCAAG 642
consensus_8137#2      GGGCG------------------------------------------------------- 579
                                                                                  

consensus_8137#0      TCACACACTTCGAAAGTACCACAGGAGCGGAACGAACCCGGGAGCCTGAGGTGTCCCGGT 1356
consensus_8137#1      TCANCCACT--AACNGAACGGT--CAGCTACCCANA---GGGAAGTTCCNTTGCGGCAAT 695
consensus_8137#2      ------------------------------------------------------------
                                                                                  

consensus_8137#0      GCCTGTGATAAGCGAATGAAATTCTCGGCATTACGGTGCTGAACCGGAGCAGGAGGCGTC 1416
consensus_8137#1      ATATATGATTACTAATTNTAATAATA---------------------------------- 721
consensus_8137#2      ------------------------------------------------------------
                                                                                  

consensus_8137#0      AGCAAGGATATTAGTGTGTCACACCGTGTTTTAGCATTTCGCATACATTTCGCAACACCA 1476
consensus_8137#1      ------------------------------------------------------------
consensus_8137#2      ------------------------------------------------------------
                                                                                  

consensus_8137#0      GATCGTGACCGTTCCGTCGTATTGGTGGAGCAACTTAGAACGTTCACTAGATCGGATCGC 1536
consensus_8137#1      ------------------------------------------------------------
consensus_8137#2      ------------------------------------------------------------
                                                                                  

consensus_8137#0      GTAATTCACAGCTTAAGTGGTGGAGGTTTCAAAACGACAAAATAAAAATGGGGAAATGAT 1596
consensus_8137#1      ------------------------------------------------------------
consensus_8137#2      ------------------------------------------------------------
                                                                                  

consensus_8137#0      TTTATGCTTTTATACNAACTACCGCATTAGTATGTAGGGAANAAGCTTGATAATTACAGT 1656
consensus_8137#1      ------------------------------------------------------------
consensus_8137#2      ------------------------------------------------------------
                                                                                  

consensus_8137#0      CTCC 1660
consensus_8137#1      ----
consensus_8137#2      ----
                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)