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Anopheles gambiae
cluster # 8143 cluster # 8143       Sequences # 9       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8143#0 length = 921 sequences # 2  
consensus_8143#1 length = 911 sequences # 3  
consensus_8143#2 length = 750 sequences # 2  
consensus_8143#3 length = 531 sequences # 2  

consensusID : consensus_8143#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 921
fasta sequence
                              [CCGATTTTCCTAGATCCATTTCGTATAGGGTTTGGTACATGTTTTGAACAAAAAAGTGTGATATCTGTATAGTTTAAAACATAATGTTGCAGTTCATGCTCCTGTTCAGCCGACAAGGCAAACTTAGGCTACAGAAATGGTACGTTGCACACTCGGACAAGGTAAAGAAGAAGATCACCCGCGAACTGATCACCACAATCCTGTCTCGCAAGCCCAAGATGTGCTCCTTCCTGGAGTGGAAAGACTGTACTATTGTTTACAAAAGATACGCTAGCTTATACTTTTGCTGCGCTATCGAGCAGAATGATAACGAACTGCTAACGCTGGAAGTAATTCACAGATATGTTGAGCTGTTGGACAAGTACTTCGGCAGTGTGTGTGAATTGGACATCATTTTCAACTTCGAGAAGGCCTATTTCATACTGGACGAGCTGCTTGTGGGAGGTGAAATACAGGAAACGTCGAAAAAAAATGTCCTCAAGGCAATAGCGGCGCAAGATGTGCTACAAGAGGATGAAGCGGCGGACGGTGCCTTAAGAGATATTGGACTGCTCTGAAAGCAAATGCCCTTGTTCCAGCGAAACATCCCACTCTTGTTTTTACACTTACTAAAACGAACAAATTATTTTAAACATATTGCTAGACATTGAACTTTTCTTCCAATCCCTTGTCGTTTGCTCGTCTCTGCGATTGACTTGGTGTTCTTGTTCAAAAGCCAGTAGTATTACTAAGACCAACGCTAGGTGGTGCACACAGAGACACGCACACGGAACTCTAAGTGGATCTTGCTACACATTTATTTTTCCTGGGAAAGCAAGACTTTGTTAGAAAAGCATGCAATGCTGTTAATGTGTAGCAAACTTTAGAATGTTTGAATTTAATAAAATTAAAGCTTTGATGTTTATCGAAAAAAAAAAAAAA]

[+] EMBL BM603128             [CCGATTTTCCTAGATCCATTTCGTATAGGGTTTGGTACATGTTTTGAACAAAAAAGTGTGATATCTGTATAGTTTAAAACATAATGTTGCAGTTCATGCTCCTGTTCAGCCGACAAGGCAAACTTAGGCTACAGAAATGGTACGTTGCACACTCGGACAAGGTAAAGAAGAAGATCACCCGCGAACTGATCACCACAATCCTGTCTCGCAAGCCCAAGATGTGCTCCTTCCTGGAGTGGAAAGACTGTACTATTGTTTACAAAAGATACGCTAGCTTATACTTTTGCTGCGCTATCGAGCAGAATGATAACGAACTGCTAACGCTGGAAGTAATTCACAGATATGTTGAGCTGTTGGACAAGTACTTCGGCAGTGTGTGTGAATTGGACATCATTTTCAACTTCGAGAAGGCCTATTTCATACTGGACGAGCTGCTTGTGGGAGGTGAAATACAGGAAACGTCGAAAAAAAATGTCCTCAAGGCAATAGCGGCGCAAGATGTGCTACAAGAGGATGAAGCGGCGGACGGTGCCTTAAGAGATATTGGACTGCTCTGAAAGCAAATGCCCTTGTTCCAGCGAAACATCCCACTCTTGTTTTTACACTTACTAAAACGAACAA                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS097SR             [                   TTCGTATAGGGTTTGGTACATGTTTTGAACAAAAAAGTGTGATATCTGTATAGTTTAAAACATAATGTTGCAGTTCATGCTCCTGTTCAGCCGACAAGGCAAACTTAGGCTACAGAAATGGTACGTTGCACACTCGGACAAGGTGAAGAAGAAGATCACCCGCGAACTGATCACCACAATCCTGTCTCGCAAGCCCAAGATGTGCTCCTTCCTGGAGTGGAAAGACTGTACTATTGTTTACAAAAGATACGCTAGCTTATACTTTTGCTGCGCTATCGAGCAGAATGATAACGAACTGCTAACGCTGGAAGTAATTCACAGATATGTCGAGCTGTTGGACAAGTACTTCGGCAGTGTGTGTGAATTGGACATCATTTTCAACTTCGAGAAGGCCTATTTCATACTGGACGAGCTGCTTGTGGGAGGTGAAATACAGGAAACGTCGAAAAAGAATGTCCTCAAGGCAATAGCGGCGCAAGATGTGCTACAAGAGGATGAAGCGGCGGACGGTGCCTTAAGAGATATTGGACTGCTCTG AAGCAAATG CCTTGTTCCAGCGAAACATCCCACTCTTG TTTTACACTTACT AAACGAACAAATTATTTTAAACATATTGCTAGACATTGAACTTTTCTTCCAATCCCTTGTCGTTTGCTCGTCTCTGCGATTGACTTGGTGTTCTTGTTCAAAAGCCAGTAGTATTACTAAGACCAACGCTAGGTGGTGCACACAGAGACACGCACACGGAACTCTAAGTGGATCTTGCTACACATTTATTTTTCCTGGGAAAGCAAGACTTTGTTAGAAAAGCATGCAATGCTGTTAATGTGTAGCAAACTTTAGAATGTTTGAATTTAATAAAATTAAAGCTTTGATGTTTATCGAAAAAAAAAAAAAA]


>consensus_8143#0 CCGATTTTCCTAGATCCATTTCGTATAGGGTTTGGTACATGTTTTGAACAAAAAAGTGTG ATATCTGTATAGTTTAAAACATAATGTTGCAGTTCATGCTCCTGTTCAGCCGACAAGGCA AACTTAGGCTACAGAAATGGTACGTTGCACACTCGGACAAGGTAAAGAAGAAGATCACCC GCGAACTGATCACCACAATCCTGTCTCGCAAGCCCAAGATGTGCTCCTTCCTGGAGTGGA AAGACTGTACTATTGTTTACAAAAGATACGCTAGCTTATACTTTTGCTGCGCTATCGAGC AGAATGATAACGAACTGCTAACGCTGGAAGTAATTCACAGATATGTTGAGCTGTTGGACA AGTACTTCGGCAGTGTGTGTGAATTGGACATCATTTTCAACTTCGAGAAGGCCTATTTCA TACTGGACGAGCTGCTTGTGGGAGGTGAAATACAGGAAACGTCGAAAAAAAATGTCCTCA AGGCAATAGCGGCGCAAGATGTGCTACAAGAGGATGAAGCGGCGGACGGTGCCTTAAGAG ATATTGGACTGCTCTGAAAGCAAATGCCCTTGTTCCAGCGAAACATCCCACTCTTGTTTT TACACTTACTAAAACGAACAAATTATTTTAAACATATTGCTAGACATTGAACTTTTCTTC CAATCCCTTGTCGTTTGCTCGTCTCTGCGATTGACTTGGTGTTCTTGTTCAAAAGCCAGT AGTATTACTAAGACCAACGCTAGGTGGTGCACACAGAGACACGCACACGGAACTCTAAGT GGATCTTGCTACACATTTATTTTTCCTGGGAAAGCAAGACTTTGTTAGAAAAGCATGCAA TGCTGTTAATGTGTAGCAAACTTTAGAATGTTTGAATTTAATAAAATTAAAGCTTTGATG TTTATCGAAAAAAAAAAAAAA



consensusID : consensus_8143#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 911
fasta sequence
                              [GCGGAATTCCCCGAGCACTGTTGGCCTATTGGATTTTTTTTTTCGTATAGGGTTTGGTACATGTTTTGAACGAAAAAGTGTGATATCTGTATAGTTTAAAACATAATGTTGCAGTTCATGCTCCTGTTCAGCCGACAAGGCAAACTTAGGCTACAGAAATGGTACGTTGCACACTCGGACAAGGTAAAGAAGAAGATCACCCGCGAACTGATCACCACAATCCTGTCTCGCAAGCCCAAGATGTGCTCCTTCCTGGAGTGGAAAGACTGTACTATTGTTTACAAAAGATACGCTAGCTTATACTTTTGCTGCGCTATCGAGCAGAATGATAACGAACTGCTAACGCTGGAAGTAATTCACAGATATGTC-GAGCTGTTGGACAAGTACTTC-GGCAGTGTGTGTGAATTGGACATCATTTTCAACTTCGAGAAGGCCTATTTCATACTGGACGAGCTGCTTGTGGGAGGTGAAATACAGGAAACGTCGAAAAAGAATGTCCTCAAGGCAATAGCGGCGCAAGATGTGCTACAAGAGGATGAAGCGGCGGACGGTGCCTTAAGAGATATTGGACTGCTCTGAAGCAAATGCCTTGTTCCAGCGAAACATCCCACTCTTGTTTTACACTTACTAAACGAACAAATTATTTTAAACATATTGCTAGACATTGAACTTTTCTTCCAA-TCCCTTGTCGTTTGCTCGTCTCTGCGATTGACTTGGTGTTCTTGTTCAAAAGCCAGTAGTATTACTAAGACCAACGCTAGGTGGTGCACACAGAGACACGCACACGGAACTCTAAGTGGATCTTGCTACACATTTATTTTTCCTGGGAAAGCAAGACTTTGTTAGAAAAGCATGCAATGCTGTAATGTGTAGCAAACTTTAGAATGTTTGAATTTCCAACCCATCCCGGT]

[-] EMBL CNS097SS             [GCGGAATTCCCCGAGCACTGTTGGCCTATTGGATTTTTTTTTTCGTATAGGGTTTGGTACATGTTTTGAACAAAAAAGTGTGATATCTGTATAGTTTAAAACATAATGTTGCAGTTCATGCTCCTGTTCAGCCGACAAGGCAAACTTAGGCTACAGAAATGGTAC TTGAAAACTCGGACAAGGTGAAGAAGAAGATCACCCGCGAACTGATCACCACAATCCTTTCTCGCAAGCCCAAGATGTGCTCCTTCCTGGAGTGGAAAGACTGTACTATTGTTTACAAAAGATACGCTAGCTTATACTTTT CTGCGCTATCGAGCAGAATGATAACGGACTG TAACGCTGGAAGTAATTCACAGATATGTCGGAGCTGTTGGACAAGTACTTCGGGCAGTGTGTGTGAATTGGACATCATTTTCAACTTCGAGAAGGCCTATTTCATACTGGACGAGCTGCTTGTGGGAGGTGAAATACAGGAAACGTCGAAAAAGAATGTCCTCAAGGCAATAGCGGCGCAAGATGTGCTACAAGAGGATGAAGCGGCGGACGGTGCCTTAAGAGATATTGGACTGCTCTGAAGCAAATGCCTTGTTCCAGCGAAACATCCCACTCTTGTTTTACACTTACTAAACGAACAAATTATTTTAAACATATTGCTAGACATTGAACTTTTCTTCCAA TCCCTTGTCGTTTGCTCGTCTCTGCGATTGACTTGGTGTTCTTGTTCAAAAGCCAGTAGTATTACTAAGACCAACGCTAGGTGGTGCACACAGAGACACGCACACGGAACTCTAAGTGGATCTTGCTACACATTTATTTTTCCTGGGAAAGCAAGACTTTGTTAGAAAAGCATGCAATGCTGTAATGTGTAGCAAACTTTAGAATGTTTGAATTTCCAACCCATCCCGGT]
[+] EMBL BM646349             [                                    ccgaTTTCGTGTAGGGTTTGGTACATGTTTTGAACGAAAAAGTGTGATATCTGTATAGTTTAAAACATAATGTTGCAGTTCATGCTCCTGTTCAGCCGACAAGGCAAACTTAGGCTACAGAAATGGTACGTTGCACACTCGGACAAGGTAAAGAAGAAGATCACCCGCGAACTGATCACCACAATCCTGTCTCGCAAGCCCAAGATGTGCTCCTTCCTGGAGTGGAAAGACTGTACTATTGTTTACAAAAGATACGCTAGCTTATACTTTTGCTGCGCTATCGAGCAGAATGATAACGAACTGCTAACGCTGGAAGTAATTCACAGATATGTC GAGCTGTTGGACAAGTACTTC GGCAGTGTGTGTGAATTGGACATCATTTTCAACTTCGAGAAGGCCTATTTCATACTGGACGAGCTGCTTGTGGGAGGTGAAATACAGGAAACGTCGAAAAAGAATGTCCTCAAGGCAATAGCGGCGCAAGATGTGCTACAAGAGGATGAAGCGGCGGACGGTGCCTTAAGAGATATTGGACTGCTCTGAAGCAAATGCCTTGTTCCAGCGAAACATCCCACTCTTGTTTTACACTTACTAAACGAACAAATTATTTTAAACATATTTCTAGACATTGAACTTTTCTTCCAATTCCCTTGTCGTATGCTCGTCTCTGCGAATAACTTGGTGT                                                                                                                                                                                               ]
[+] EMBL BM598643             [                                                           ccgGTTTTGAACGAAAAAGTGTGATATCTGTATAGTTTAAAACATAATGTTGCAGTTCATGCTCCTGTTCAGCCGACAAGGCAAACTTAGGCTACAGAAATGGTACGTTGCACACTCGGACAAGGTAAAGAAGAAGATCACCCGCGAACTGATCACCACAATCCTGTCTCGCAAGCCCAAGATGTGCTCCTTCCTGGAGTGGAAAGACTGTACTATTGTTTACAAAAGATACGCTAGCTTATACTTTTGCTGCGCTATCGAGCAGAATGATAACGAACTGCTAACGCTGGAAGTAATTCACAGATATGTC GAGCTGTTGGACAAGTACTTC GGCAGTGTATGTGAATTGGACATCATTTTCAACTTCGAGAAGGCCTATTTCATACTGGACGAGCTGCTTGTGGGAGGTGAAATACAGGAAACGTCGAAAAAGAATGTCCTCAAGGCAATAGCGGCGCAAGATGTGCTACAAGAGGATGAAGCGGCGGACGGTGCCTTAAGAGATATTGGACTGCTCTGAAGCAAATGCCTTGTTCCAGCGAAACATCCCACTCTTGTTTTA                                                                                                                                                                                                                                                                                                   ]


>consensus_8143#1 GCGGAATTCCCCGAGCACTGTTGGCCTATTGGATTTTTTTTTTCGTATAGGGTTTGGTAC ATGTTTTGAACGAAAAAGTGTGATATCTGTATAGTTTAAAACATAATGTTGCAGTTCATG CTCCTGTTCAGCCGACAAGGCAAACTTAGGCTACAGAAATGGTACGTTGCACACTCGGAC AAGGTAAAGAAGAAGATCACCCGCGAACTGATCACCACAATCCTGTCTCGCAAGCCCAAG ATGTGCTCCTTCCTGGAGTGGAAAGACTGTACTATTGTTTACAAAAGATACGCTAGCTTA TACTTTTGCTGCGCTATCGAGCAGAATGATAACGAACTGCTAACGCTGGAAGTAATTCAC AGATATGTCGAGCTGTTGGACAAGTACTTCGGCAGTGTGTGTGAATTGGACATCATTTTC AACTTCGAGAAGGCCTATTTCATACTGGACGAGCTGCTTGTGGGAGGTGAAATACAGGAA ACGTCGAAAAAGAATGTCCTCAAGGCAATAGCGGCGCAAGATGTGCTACAAGAGGATGAA GCGGCGGACGGTGCCTTAAGAGATATTGGACTGCTCTGAAGCAAATGCCTTGTTCCAGCG AAACATCCCACTCTTGTTTTACACTTACTAAACGAACAAATTATTTTAAACATATTGCTA GACATTGAACTTTTCTTCCAATCCCTTGTCGTTTGCTCGTCTCTGCGATTGACTTGGTGT TCTTGTTCAAAAGCCAGTAGTATTACTAAGACCAACGCTAGGTGGTGCACACAGAGACAC GCACACGGAACTCTAAGTGGATCTTGCTACACATTTATTTTTCCTGGGAAAGCAAGACTT TGTTAGAAAAGCATGCAATGCTGTAATGTGTAGCAAACTTTAGAATGTTTGAATTTCCAA CCCATCCCGGT



consensusID : consensus_8143#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 750
fasta sequence
                              [AGAATCGCCCCGAGGTTGGTTTGGTACATGTTTTGAACAAAAAAGTGTGATATCTGTATAGTTTAAAACATAATGTTGCAGTTCATGCTCCTGTTCAGCCGACAAGGCAAACTTAGGCTACAGAAATGGTACGTTGCACACTCGGACAAGGTAAAGAAGAAGATCACCCGCGAACTGATCACCACAATCCTGTCTCGCAAGCCCAAGATGTGCTCCTTCCTGGAGTGGAAAGACTGTACTATTGTTTACAAAAGATACGCTACCTTATACTTTTTGCTGCGCTATCGAGCAGAATGATAACGAACTGCTAACGCTGGAAGTAATTCACAGATATGTTCGAGCTGTTGGACAAGTACTTCGCGCAGCTGTGTGTGAATTGGACATCATTTTTCAACCTTCGAGCGAAAGGCCTATTTTCATACTGGGACGGAGCTGCTTGTGGGAGGGTTGAANACTAGGAAACGTCGAAAACAGAATGTCCTCAAGGCAATAGCGGCGCAAGATGTGCTACAAGAGGATGAAGCGGCGGACGGTGCCTTAAGAGATATTGGACTGCTCTGAAGCAAATGCCTTGATCCAGCGAAACATCCCACTCTTGTTCTACACTTACTAAACGAACAAATTATTTTAAACATATTGCTAGACATTGAACTTTTCTTCCAATCCCTTGTCGTTGCTCGTCTCTGCGATTGACTTGGTGTTCTTGTTCAAAAGCCAGTAGTATTACTAAGACCAACGCTAGGTGGTGCA]

[+] EMBL AL934765             [AGAATCGCCCCGAGGTTGGTTTGGTACATGTTTTGAACAAAAAAGTGTGATATCTGTATAGTTTAAAACATAATGTTGCAGTTCATGCTCCTGTTCAGCCGACAAGGCAAACTTAGGCTACAGAAATGGTACGTTGCACACTCGGACAAGGTAAAGAAGAAGATCACCCGCGAACTGATCACCACAATCCTGTCTCGCAAGCCCAAGATGTGCTCCTTCCTGGAGTGGAAAGACTGTACTATTGTTTACAAAAGATACGCTACCTTATACTTTTTGCTGCGCTATCGAGCAGAATGATAACGAACTGCTAACGCTGGAAGTAATTCACAGATATGTTCGAGCTGTTGGACAAGTACTTCGCGCAGCTGTGTGTGAATTGGACATCATTTTTCAACCTTCGAGCGAAAGGCCTATTTTCATACTGGGACGGAGCTGCTTGTGGGAGGGTTGAANACT                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AL693170             [         CCCAGGGTTATTTGGTACATGTTTTGAACGACAAAGTGTGATATCTGTATAGTTTAAAACATAATGTTGCAGTTCATGCTCCTGTTCAGCCGACAAGGCAAACTTAGGCTACAGAAATGGTACGTTGCACACTCGGACAAGGTAAAGAAGAAGATCACCCGCGAACTGATCACCACAATCCTGTCTCGCAAGCCCAAGATGTGCTCCTTCCTGGAGTGGAAAGACTGTACTATTGTTTACAAAAGATACGCTAGCTTATAC TTTTGCTGCGCTATCGAGCAGAATGATAACGAACTGCTAACGCTGGAAGTAATTCACAGATATG TCGAGCTGTTGGACAAGTACTTCGGCCAG TGTATGTGAATTGGACATCA TTTTCAA CTTC  GCAGAAGGCCTA TTTCATACT GGAC GAGCTGCTTGTGGGA GGTGAAATAC AGGAAACGTCGAAAACAGAATGTCCTCAAGGCAATAGCGGCGCAAGATGTGCTACAAGAGGATGAAGCGGCGGACGGTGCCTTAAGAGATATTGGACTGCTCTGAAGCAAATGCCTTGATCCAGCGAAACATCCCACTCTTGTTCTACACTTACTAAACGAACAAATTATTTTAAACATATTGCTAGACATTGAACTTTTCTTCCAATCCCTTGTCGTTGCTCGTCTCTGCGATTGACTTGGTGTTCTTGTTCAAAAGCCAGTAGTATTACTAAGACCAACGCTAGGTGGTGCA]


>consensus_8143#2 AGAATCGCCCCGAGGTTGGTTTGGTACATGTTTTGAACAAAAAAGTGTGATATCTGTATA GTTTAAAACATAATGTTGCAGTTCATGCTCCTGTTCAGCCGACAAGGCAAACTTAGGCTA CAGAAATGGTACGTTGCACACTCGGACAAGGTAAAGAAGAAGATCACCCGCGAACTGATC ACCACAATCCTGTCTCGCAAGCCCAAGATGTGCTCCTTCCTGGAGTGGAAAGACTGTACT ATTGTTTACAAAAGATACGCTACCTTATACTTTTTGCTGCGCTATCGAGCAGAATGATAA CGAACTGCTAACGCTGGAAGTAATTCACAGATATGTTCGAGCTGTTGGACAAGTACTTCG CGCAGCTGTGTGTGAATTGGACATCATTTTTCAACCTTCGAGCGAAAGGCCTATTTTCAT ACTGGGACGGAGCTGCTTGTGGGAGGGTTGAANACTAGGAAACGTCGAAAACAGAATGTC CTCAAGGCAATAGCGGCGCAAGATGTGCTACAAGAGGATGAAGCGGCGGACGGTGCCTTA AGAGATATTGGACTGCTCTGAAGCAAATGCCTTGATCCAGCGAAACATCCCACTCTTGTT CTACACTTACTAAACGAACAAATTATTTTAAACATATTGCTAGACATTGAACTTTTCTTC CAATCCCTTGTCGTTGCTCGTCTCTGCGATTGACTTGGTGTTCTTGTTCAAAAGCCAGTA GTATTACTAAGACCAACGCTAGGTGGTGCA



consensusID : consensus_8143#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 531
fasta sequence
                              [CCGCGGACGCGTGGGTTCGTGTAGGGTTTGGTACATGTTTTGAACGAAAAAGTGTGATATCTGTATAGTTTAAAACATAATGTTGCAGTTCATGCTCCTGTTCAGCCGACAAGGCAAACTTAGGCTACAGAAATGGTACGTTGCACACTCGGACAAGGTAAAGAAGAAGATCACCCGCGAACTGATCACCACAATCCTGTCTCGCAAGCCCAAGATGTGCTCCTTCCTGGAGTGGAAAGACTGTACTATTGTTTACAAAAGATACGCTAGCTTATACTTTTGCTGCGCTATCGAGCAGAATGATAACGAACTGCTAACGCTGGAAGTAATTCACAGATATGTCGAGCTGTTGGACAAGTACTTCGGCAGTGTATGTGAATTGGACATCATTTTCAACTTCGAGAAGGCCTATTTCATACTGGACGAGCTGCTTGTGGGAGGTGAAATACAGGAAACGTCGAAAAAGAATGTCCTCAAGGCAATAGCGGCGCAAGATGTGCTACAAGAGGACGAAACGCCACAAGGATTCTT]

[+] EMBL BM616008             [CCGCGGACGCGTGGGTTCGTGTAGGGTTTGGTACATGTTTTGAACGAAAAAGTGTGATATCTGTATAGTTTAAAACATAATGTTGCAGTTCATGCTCCTGTTCAGCCGACAAGGCAAACTTAGGCTACAGAAATGGTACGTTGCACACTCGGACAAGGTAAAGAAGAAGATCACCCGCGAACTGATCACCACAATCCTGTCTCGCAAGCCCAAGATGTGCTCCTTCCTGGAGTGGAAAGACTGTACTATTGTTTACAAAAGATACGCTAGCTTATACTTTTGCTGCGCTATCGAGCAGAATGATAACGAACTGCTAACGCTGGAAGTAATTCACAGATATGTCGAGCTGTTGGACAAGTACTTCGGCAGTGTATGTGAATTGGACATCATTTTCAACTTCGAGAAGGCCTATTTCATACTGGACGAGCTGCTTGTGGGAGGTGAAATACAGGAAACGTCGAAAAAGAATGTCCTCAAGGCAATAGCGGCGCAAGATGTGCTACAAGAGGACGAAACGCCACAAGGATTCTT]
[+] EMBL BM580590             [                                                  ccgGTGATATCTGTATAGTTTAAAACATAATGTTGCAGTTCATGCTCCTGTTCAGCCGACAAGGCAAACTTAGGCTACAGAAATGGTACGTTGCACACTCGGACAAGGTAAAGAAGAAGATCACCCGCGAACTGATCACCACAATCCTGTCTCGCAAGCCCAAGATGTGCTCCTTCCTGGAGTGGAAAGACTGTACTATTGTTTACAAAAGATACGCTAGCTTATACTTTTGCTGCGCTATCGAGCAGAATGATAACGAACTGCTAACGCTGGAAGTAATTCACAGATATGTCGAGCTGTTGGACAAGTACTTCGGCAGTGTATGTGAATTGGACATCATTTTCAACTTCGAGAAGGCCTATTTCATACTGGACGAGCTGCTTGTGGGAGGTGAAATACAGGAAACGTCGAAAAAGAATGTCCTCAAG                                                     ]


>consensus_8143#3 CCGCGGACGCGTGGGTTCGTGTAGGGTTTGGTACATGTTTTGAACGAAAAAGTGTGATAT CTGTATAGTTTAAAACATAATGTTGCAGTTCATGCTCCTGTTCAGCCGACAAGGCAAACT TAGGCTACAGAAATGGTACGTTGCACACTCGGACAAGGTAAAGAAGAAGATCACCCGCGA ACTGATCACCACAATCCTGTCTCGCAAGCCCAAGATGTGCTCCTTCCTGGAGTGGAAAGA CTGTACTATTGTTTACAAAAGATACGCTAGCTTATACTTTTGCTGCGCTATCGAGCAGAA TGATAACGAACTGCTAACGCTGGAAGTAATTCACAGATATGTCGAGCTGTTGGACAAGTA CTTCGGCAGTGTATGTGAATTGGACATCATTTTCAACTTCGAGAAGGCCTATTTCATACT GGACGAGCTGCTTGTGGGAGGTGAAATACAGGAAACGTCGAAAAAGAATGTCCTCAAGGC AATAGCGGCGCAAGATGTGCTACAAGAGGACGAAACGCCACAAGGATTCTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8143#1      GCGGAATTCCCCGAGCACTGTTGGCCTATTGGATTTTTTTTTTCGTATAGGGTTTGGTAC 60
consensus_8143#3      --------------------------CCGCGGACGCGTGGGTTCGTGTAGGGTTTGGTAC 34
consensus_8143#0      -------------------CCGATTTTCCTAGATCCAT---TTCGTATAGGGTTTGGTAC 38
consensus_8143#2      ------------------------------AGAATCGC---CCCGAGGTTGGTTTGGTAC 27
                                                     **          **     **********

consensus_8143#1      ATGTTTTGAACGAAAAAGTGTGATATCTGTATAGTTTAAAACATAATGTTGCAGTTCATG 120
consensus_8143#3      ATGTTTTGAACGAAAAAGTGTGATATCTGTATAGTTTAAAACATAATGTTGCAGTTCATG 94
consensus_8143#0      ATGTTTTGAACAAAAAAGTGTGATATCTGTATAGTTTAAAACATAATGTTGCAGTTCATG 98
consensus_8143#2      ATGTTTTGAACAAAAAAGTGTGATATCTGTATAGTTTAAAACATAATGTTGCAGTTCATG 87
                      *********** ************************************************

consensus_8143#1      CTCCTGTTCAGCCGACAAGGCAAACTTAGGCTACAGAAATGGTACGTTGCACACTCGGAC 180
consensus_8143#3      CTCCTGTTCAGCCGACAAGGCAAACTTAGGCTACAGAAATGGTACGTTGCACACTCGGAC 154
consensus_8143#0      CTCCTGTTCAGCCGACAAGGCAAACTTAGGCTACAGAAATGGTACGTTGCACACTCGGAC 158
consensus_8143#2      CTCCTGTTCAGCCGACAAGGCAAACTTAGGCTACAGAAATGGTACGTTGCACACTCGGAC 147
                      ************************************************************

consensus_8143#1      AAGGTAAAGAAGAAGATCACCCGCGAACTGATCACCACAATCCTGTCTCGCAAGCCCAAG 240
consensus_8143#3      AAGGTAAAGAAGAAGATCACCCGCGAACTGATCACCACAATCCTGTCTCGCAAGCCCAAG 214
consensus_8143#0      AAGGTAAAGAAGAAGATCACCCGCGAACTGATCACCACAATCCTGTCTCGCAAGCCCAAG 218
consensus_8143#2      AAGGTAAAGAAGAAGATCACCCGCGAACTGATCACCACAATCCTGTCTCGCAAGCCCAAG 207
                      ************************************************************

consensus_8143#1      ATGTGCTCCTTCCTGGAGTGGAAAGACTGTACTATTGTTTACAAAAGATACGCTAGCTTA 300
consensus_8143#3      ATGTGCTCCTTCCTGGAGTGGAAAGACTGTACTATTGTTTACAAAAGATACGCTAGCTTA 274
consensus_8143#0      ATGTGCTCCTTCCTGGAGTGGAAAGACTGTACTATTGTTTACAAAAGATACGCTAGCTTA 278
consensus_8143#2      ATGTGCTCCTTCCTGGAGTGGAAAGACTGTACTATTGTTTACAAAAGATACGCTACCTTA 267
                      ******************************************************* ****

consensus_8143#1      TACTTTT-GCTGCGCTATCGAGCAGAATGATAACGAACTGCTAACGCTGGAAGTAATTCA 359
consensus_8143#3      TACTTTT-GCTGCGCTATCGAGCAGAATGATAACGAACTGCTAACGCTGGAAGTAATTCA 333
consensus_8143#0      TACTTTT-GCTGCGCTATCGAGCAGAATGATAACGAACTGCTAACGCTGGAAGTAATTCA 337
consensus_8143#2      TACTTTTTGCTGCGCTATCGAGCAGAATGATAACGAACTGCTAACGCTGGAAGTAATTCA 327
                      ******* ****************************************************

consensus_8143#1      CAGATATGTC-GAGCTGTTGGACAAGTACTTCG-GCAG-TGTGTGTGAATTGGACATCAT 416
consensus_8143#3      CAGATATGTC-GAGCTGTTGGACAAGTACTTCG-GCAG-TGTATGTGAATTGGACATCAT 390
consensus_8143#0      CAGATATGTT-GAGCTGTTGGACAAGTACTTCG-GCAG-TGTGTGTGAATTGGACATCAT 394
consensus_8143#2      CAGATATGTTCGAGCTGTTGGACAAGTACTTCGCGCAGCTGTGTGTGAATTGGACATCAT 387
                      *********  ********************** **** *** *****************

consensus_8143#1      TTTCAA--CTTCGAG---AAGGCCTATTT-CATACTGGAC--GAGCTGCTTGTGGGAGG- 467
consensus_8143#3      TTTCAA--CTTCGAG---AAGGCCTATTT-CATACTGGAC--GAGCTGCTTGTGGGAGG- 441
consensus_8143#0      TTTCAA--CTTCGAG---AAGGCCTATTT-CATACTGGAC--GAGCTGCTTGTGGGAGG- 445
consensus_8143#2      TTTTCAACCTTCGAGCGAAAGGCCTATTTTCATACTGGGACGGAGCTGCTTGTGGGAGGG 447
                      ***  *  *******   *********** ********    ***************** 

consensus_8143#1      -TGAAATACAGGAAACGTCGAAAA-AGAATGTCCTCAAGGCAATAGCGGCGCAAGATGTG 525
consensus_8143#3      -TGAAATACAGGAAACGTCGAAAA-AGAATGTCCTCAAGGCAATAGCGGCGCAAGATGTG 499
consensus_8143#0      -TGAAATACAGGAAACGTCGAAAA-AAAATGTCCTCAAGGCAATAGCGGCGCAAGATGTG 503
consensus_8143#2      TTGAANACTAGGAAACGTCGAAAACAGAATGTCCTCAAGGCAATAGCGGCGCAAGATGTG 507
                       ****    *************** * *********************************

consensus_8143#1      CTACAAGAGGATGAAGCGGCGGACGGTGCCTTAAGAGATATTGGACTGCTCTGAA-GCAA 584
consensus_8143#3      CTACAAGAGGACGAAACGCCACAAGGATTCTT---------------------------- 531
consensus_8143#0      CTACAAGAGGATGAAGCGGCGGACGGTGCCTTAAGAGATATTGGACTGCTCTGAAAGCAA 563
consensus_8143#2      CTACAAGAGGATGAAGCGGCGGACGGTGCCTTAAGAGATATTGGACTGCTCTGAA-GCAA 566
                      *********** *** ** *  * **   ***                            

consensus_8143#1      ATGCC-TTGTTCCAGCGAAACATCCCACTCTTGTTTT-ACACTTACTAAA-CGAACAAAT 641
consensus_8143#3      ------------------------------------------------------------
consensus_8143#0      ATGCCCTTGTTCCAGCGAAACATCCCACTCTTGTTTTTACACTTACTAAAACGAACAAAT 623
consensus_8143#2      ATGCC-TTGATCCAGCGAAACATCCCACTCTTGTTCT-ACACTTACTAAA-CGAACAAAT 623
                                                                                  

consensus_8143#1      TATTTTAAACATATTGCTAGACATTGAACTTTTCTTCCAATCCCTTGTCGTTTGCTCGTC 701
consensus_8143#3      ------------------------------------------------------------
consensus_8143#0      TATTTTAAACATATTGCTAGACATTGAACTTTTCTTCCAATCCCTTGTCGTTTGCTCGTC 683
consensus_8143#2      TATTTTAAACATATTGCTAGACATTGAACTTTTCTTCCAATCCCTTGTCGTT-GCTCGTC 682
                                                                                  

consensus_8143#1      TCTGCGATTGACTTGGTGTTCTTGTTCAAAAGCCAGTAGTATTACTAAGACCAACGCTAG 761
consensus_8143#3      ------------------------------------------------------------
consensus_8143#0      TCTGCGATTGACTTGGTGTTCTTGTTCAAAAGCCAGTAGTATTACTAAGACCAACGCTAG 743
consensus_8143#2      TCTGCGATTGACTTGGTGTTCTTGTTCAAAAGCCAGTAGTATTACTAAGACCAACGCTAG 742
                                                                                  

consensus_8143#1      GTGGTGCACACAGAGACACGCACACGGAACTCTAAGTGGATCTTGCTACACATTTATTTT 821
consensus_8143#3      ------------------------------------------------------------
consensus_8143#0      GTGGTGCACACAGAGACACGCACACGGAACTCTAAGTGGATCTTGCTACACATTTATTTT 803
consensus_8143#2      GTGGTGCA---------------------------------------------------- 750
                                                                                  

consensus_8143#1      TCCTGGGAAAGCAAGACTTTGTTAGAAAAGCATGCAATGCTGT-AATGTGTAGCAAACTT 880
consensus_8143#3      ------------------------------------------------------------
consensus_8143#0      TCCTGGGAAAGCAAGACTTTGTTAGAAAAGCATGCAATGCTGTTAATGTGTAGCAAACTT 863
consensus_8143#2      ------------------------------------------------------------
                                                                                  

consensus_8143#1      TAGAATGTTTGAATTTCCAACCCATCCCGGT--------------------------- 911
consensus_8143#3      ----------------------------------------------------------
consensus_8143#0      TAGAATGTTTGAATTTAATAAAATTAAAGCTTTGATGTTTATCGAAAAAAAAAAAAAA 921
consensus_8143#2      ----------------------------------------------------------
                                                                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)