Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8144 cluster # 8144       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8144#0 length = 1192 sequences # 3  
consensus_8144#1 length = 1150 sequences # 5  
consensus_8144#2 length = 666 sequences # 1  

consensusID : consensus_8144#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1192
fasta sequence
                              [ATCGTGACACTTGCCCGCTGTACAAGGAGGAATGGCTTGCCTCCCGCCTATGTCAGCTATCTGGAAAATGAAAGGAACGCTGTCATTCGCTCTTACATACATCCAAATTGGAAAGAGGGATCACTTTATGGAGACGTAGGACTTCTTCAACTGAAAGAGCCGTTGAAGATTTCTTTACAATTTCAACCAGCTTGCATCTGGGATCGCGCAGACCTTCCTGAGTCGGAGTTTTTTGTTTCTGGCCGTGGGCTGTCCGAGTTTCATGCTATTCACGTCGAGGAAGATGATTTAGAAACAAGTGCTTGTAAGTTGCTCTGATGTGCTCTGTAACCCTCTCTCACTTTTTCTAATGACAATATCATTTCCTTGTAAGCTTTGAATCACATAATCAATGTTCTTGGAGTAGTAGAGCTTCATAACGGCACCAACTGCACGCAGCATCGTAACGAGACGCCGGCCGAACATCTCTGCTTCGGAGCCAAACCGTTCCTGGTGCCAAGTACCTGTCACCAATCACTGGGTGGTCCGCTAGAGCGTGAAGTGGGGCGTTTTGGTCGTAGCCTACCGTACGTGTACGCGCTGAACCTTGCAGGCCGTGACTGTGGTTACGGTGAATCGGCACTCGGCGTTCGGTTAGCGTCCCATCTGGCGTGGTTCAATTCGATCCTGTTTCCGAAGAGGGTCGAAGAAGATCCCGCGGAAGCTTTCATCTTCCTGAACAATGATTTGGAAGAGGGTGACACGTGTGCGGTGGACGGCGTTGGGATGGGTGTGTGCACAAGTGCAGTGAATTGTCCGAGAATGTTGTACCGCTTTCAGCAAAATCAACCGGTGCAGTTCTGTGGCAGTGGAACGGTGTTGTGCTGTCCGCGGGAGGACGTACGGAGTGCGCTAGATGCAGAATGGCGAGAAATCGACAGCTGTGCCACGAGACGGAATAGCGAGGAGGATGATTTCGATCCAAGGCACCATATGGTAGGTAAATGTTGATATCCTCTTTACGGATCCTTATTTGTGCACAAACCATTCGTACAGGTATCCTTAGATTTGAGCCAAGGGATAGAAACGCAGACTTGTATCGCAACAATGATTAGCAACAGAACGTTTTTGACCGCTGCCAGCTGTCTGGACGGGAAAAGCACGCTCAAATACGTAACATTAGACAATAGAGAGATTCAATGGTTGTCTTGAT]

[+] EMBL CNS08QQR             [ATCGTGACACTTGCCCGCTGTACAAGGAGGAATGGCTTGCCTCCCGCCTATGTCAGCTATCTGGAAAATGAAAGGAACGCTGTCATTCGCTCTTACATACATCCAAATTGGAAAGAGGGATCACTTTATGGAGACGTAGGACTTCTTCAACTGAAAGAGCCGTTGAAGATTTCTTTACAATTTCAACCAGCTTGCATCTGGGATCGCGCAGACCTTCCTGAGTCGGAGTTTTTTGTTTCTGGCCGTGGGCTGTCCGAGTTTCATGCTATTCACGTCGAGGAAGATGATTTAGAAACAAGTGCTTGTAAGTTGCTCTGATGTGCTCTGTAACCCTCTCTCACTTTTTCTAATGACAATATCATTTCCTTGTAAGCTTTGAATCACATAATCAATGTTCTTGGAGTAGTAGAGCTTCATAACGGCACCAACTGCACGCAGCATCGTAACGAGACGCCGGCCGAACATCTCTGCTTCGGAGCCAAACCGTTCCTGGTGCCAAGTACCTGTCACCAATCACTGGGTGGTCCGCTAGAGCGTGAAGTGGGGCGTTTTGGTCGTAGCCTACCGTACGTGTACGCGCTGAACCTTGCAGGCCGTGACTGTGGTTACGGTGAATCGGCACTCGGCGTTCGGTTAGCGTCCCATCTGGCGTGGTTCAATTCGATCCTGTTTCCGAAGAGGGTCGAAGAAGATCCCGCGGAAGCTTTCATCTTCCTGAACAATGATTTGGAAGAGGGTGACACGTGTGCGGTGGACGGCGTTGGGATGGGTGTGTGCACAAGT                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS08ZDN             [ATCGTGACACTTGCCCGCTGTACAAGGAGGAATGGCTTGCCTCCCGCCTATGTCAGCTATCTGGAAAATGAAAGGAACGCTGTCATTCGCTCTTACATACATCCAAATTGGAAAGAGGGATCGCTTTATGGAGACGTAGGACTTCTTCAACTGAAAGAGCCGTTGAAGATTTCTTTACAATTTCAACCAGCTTGCATCTGGGATCGCGCAGACCTTCCTGAGTCGGAGTTTTTTGTTTCTGGCCGTGGGCTGTCCGAGCTTCATGCTATTCACGTCGAGGAAGATGATTTAGAAACAAGTGCTTGTAAGTTGCTCTGATGTGCTCTGTAACCCTCTCTCACTTTTTCTAATGACAATATCATTTCCTTGTAAGCTTTGAATCACATAATCAATGTTCTTGGAGTAGTAAAAATTCATAACGGCACCAACTGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX621912             [                                                                                                                                                                                                                                                                                                                                                                                                  tATCAATGTTCTTGGAGTAGTAGAGCTTCATAACGGCACCAACTGCACGCAGCATCGTAACGAGACGCCGGCCGAACATCTCTGCTTCGGAGCCAAACCGTTCCTGGTGCCAAGTACCTGTCACCAATCACTGGGTGGTCCGCTAGAGCGTGAAGTGGGGCGTTTTGGTCGTAGCCTACCCTACGTGTACGCGCTGAACCTTGCAGGCCGTGACTGTGGTTACGGTGAATCGGCACTCGGCGTTCGGTTAGCTTCCCATCTGGCGTGGTTCAATTCGATCCTGTTTCCGAAGAGAGTCGAAGAAGATCCCGCGGAAGCGTTCATTTTCCTGAACAATGATTTGGAAGAGGGTGACACGTGTGCGGTGGACGGCGTTGGGATGGGTGTGTGTACAAGTGCAGTGAATTGTCCGAGAATGTTGTACCGCTTTCAGCAAAATCAACCGGTGCAGTTCTGTGGCAGTGGAACGGTGTTGTGCTGTCCGCGGGAGGACGTACGGAGTGCGCTAGATGCAGAATGGCGAGAAATCGACAGCTGTGCCACGAGACGGAATAGCGAGGAGGATGATTTCGATCCAAGGCACCATATGGTAGGTAAATGTTGATATCCTCTTTACGGATCCTTATTTGTGCACAAACCATTCGTACAGGTATCCTTAGATTTGAGCCAAGGGATAGAAACGCAGACTTGTATCGCAACAATGATTAGCAACAGAACGTTTTTGACCGCTGCCAGCTGTCTGGACGGGAAAAGCACGCTCAAATACGTAACATTAGACAATAGAGAGATTCAATGGTTGTCTTGAT]


>consensus_8144#0 ATCGTGACACTTGCCCGCTGTACAAGGAGGAATGGCTTGCCTCCCGCCTATGTCAGCTAT CTGGAAAATGAAAGGAACGCTGTCATTCGCTCTTACATACATCCAAATTGGAAAGAGGGA TCACTTTATGGAGACGTAGGACTTCTTCAACTGAAAGAGCCGTTGAAGATTTCTTTACAA TTTCAACCAGCTTGCATCTGGGATCGCGCAGACCTTCCTGAGTCGGAGTTTTTTGTTTCT GGCCGTGGGCTGTCCGAGTTTCATGCTATTCACGTCGAGGAAGATGATTTAGAAACAAGT GCTTGTAAGTTGCTCTGATGTGCTCTGTAACCCTCTCTCACTTTTTCTAATGACAATATC ATTTCCTTGTAAGCTTTGAATCACATAATCAATGTTCTTGGAGTAGTAGAGCTTCATAAC GGCACCAACTGCACGCAGCATCGTAACGAGACGCCGGCCGAACATCTCTGCTTCGGAGCC AAACCGTTCCTGGTGCCAAGTACCTGTCACCAATCACTGGGTGGTCCGCTAGAGCGTGAA GTGGGGCGTTTTGGTCGTAGCCTACCGTACGTGTACGCGCTGAACCTTGCAGGCCGTGAC TGTGGTTACGGTGAATCGGCACTCGGCGTTCGGTTAGCGTCCCATCTGGCGTGGTTCAAT TCGATCCTGTTTCCGAAGAGGGTCGAAGAAGATCCCGCGGAAGCTTTCATCTTCCTGAAC AATGATTTGGAAGAGGGTGACACGTGTGCGGTGGACGGCGTTGGGATGGGTGTGTGCACA AGTGCAGTGAATTGTCCGAGAATGTTGTACCGCTTTCAGCAAAATCAACCGGTGCAGTTC TGTGGCAGTGGAACGGTGTTGTGCTGTCCGCGGGAGGACGTACGGAGTGCGCTAGATGCA GAATGGCGAGAAATCGACAGCTGTGCCACGAGACGGAATAGCGAGGAGGATGATTTCGAT CCAAGGCACCATATGGTAGGTAAATGTTGATATCCTCTTTACGGATCCTTATTTGTGCAC AAACCATTCGTACAGGTATCCTTAGATTTGAGCCAAGGGATAGAAACGCAGACTTGTATC GCAACAATGATTAGCAACAGAACGTTTTTGACCGCTGCCAGCTGTCTGGACGGGAAAAGC ACGCTCAAATACGTAACATTAGACAATAGAGAGATTCAATGGTTGTCTTGAT



consensusID : consensus_8144#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1150
fasta sequence
                              [TNGCCCGAGGTTAAGCGTGAGGTGTGGCGTTTTGGTCGTAGCCTACCGTACGTGTACGCGCTGAACCTAGCAGGCCGTGACTGTGGCTACGGTGAATCGGCACTCGGCGTTCGGTTAGCTTCCCATCTGACGTGGTTACAATTCGATCCTGTTTCCGCAGAGGGTCGAAAAGATCCTGGGGAAGCGTTCATCTTCCTGAACAATGATTTGGAAGAGGGTGACACGTGTGCGGTGGACGGCGTTGGGATGGGTGTGTGCACAAGTGCCGTGAATTGTCCGAGAATGTTGTACCGCTTTCAGCAAAATCAACCGGTGCGGTTCTGCGGCAGTGGATCGGAATTGTGCTGTCCGCAGGATGACGTACGGAGTGCGCCAGATGCAGAATGGCGAGAAATCGACAGCTGTGCCACGAGACGGAATAGCGAGGAGGAAGATTTCGATCCAAGGCGTCATATGGTGTCCTTAGATTTGAGCGAAGGTATAGAAACGCAGACCTGTATCGCAACAATGATTAGCAACAGAACGTTTTTGACCGCTGCCAGCTGTCTGGAAGGGAAGGGCACGCTCAAATACGTAACGCTAGACAATAGAGAGATTCAAATGGTTGTCTGGATGGTGGTTGAGAAGGTAACAGTCCATCCAGAGTACGACAGTACTACGAAACGCCACAACATTGCACTGGTAACGTTAACGCACCGCACCGAAATAGCGTTCGGTAAGAGTCCGATCTGTTTGTGGAGCAACCACACGCACACCCCGTTTTACCTGGAGCAAGTTGGGCTAACGGAAGAATCAACGCTTGGTCCAGCCCTTGCATTCACAAAGTTTAACAGTGATTGTGACCGGACGTTTCGGAGGACGTTGGACGAACACGAACTATGCGTAGATGTGGAACAACTACCATACATGGACACGGTTGAGGTAGATGAAGGCATGCCGGCTTTCTGGAAAGGACGCGGTACGGGAAACTATCTCGTTGGAATAGCGAGCCACAGTGCACCGAACGATAGTAGTGTGTTTCTGCACACGCGCATTGCACCGTACGTGGGATGGATTAAGAGTGTTTTGTGATACAACATACTGAATAAAAGCA-AAACAGCAACAACCAATTTGTTAGCAACGTTTTTGAAATAAAACATTATCGATATGT]

[+] EMBL AL934876             [TNGCCCGAGGTTAAGCGTGAGGTGTGGCGTTTTGGTCGTAGCCTACCGTACGTGTACGCGCTGAACCTAGCAGGCCGTGACTGTGGCTACGGTGAATCGGCACTCGGCGTTCGGTTAGCTTCCCATCTGACGTGGTTACAATTCGATCCTGTTTCCGCAGAGGGTCGAAAAGATCCTGGGGAAGCGTTCATCTTCCTGAACAATGATTTGGAAGAGGGTGACACGTGTGCGGTGGACGGCGTTGGGATGGGTGTGTGCACAAGTGCCGTGAATTGTCCGAGAATGTTGTACCGCTTTCAGCAAAATCAACCGGTGCGGTTCTGCGGCAGTGGATCGGAATTGTGCTGTCCGCAGGATGACGTACGGAGTGCGCCAGATGCAGAATGGCGAGAAATCGACAGCTGTGCCACGAGACGGAATAGCGAGGAGGAAGATTTCGATCCAAGGCGTCATATGGTGTCCTTAGATTTGAGCGAAGGTATAGAAACGCAGACCTGTATCGCAACAATGATTAGCAACAGAACGTTTTTGACCGCTGCCAGCTGTCTGGAAGGGAAGGGCACGCTCAAATACGTAACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CNS08QQS             [                                                                                                                                                                                                                                                                                                                                                                                                                                     GCGAGGAGGAAGATTTCGATCCAAGGCACCATATGGTATCCTTAGATTTGAGCGAAGGGATAGAAACGCAGACCTGTATCGCAACAATGATTAGCAACAGAACGTTTTTGACCGCTGCCAGCTGTCTGGAAGGGAAGGGCACGCTCAAATACGTTACGCTAGACAATAGAGAGATTCAAATGGTTGTCTGGATGGTGGTTGAGAAGGTAACAGTCCATCCAGAGTACGACAGTACTACGAAACGCCACAACATTGCACTGGTAACGTTAACGCACCGCACCGAAATAGCGTTCGGTAAGAGTCCGATCTGTTTGTGGAGCAAAAACACGCACACCCCGTTTTACCTGGAGCAAGTTGGGCTAACGGAAGAATCAACGCTTGGTCCAGCCCTTGCATTCACAAAGTTTAACAGTGATTGTGACCGGACGTTTCGGAGGACGTTGGACGAACACGAACTATGCGTAGATGTGGAACAACTACCATACATGGACACGGTTGAGGTAGATGAAGGCATGCCGGCTTTCTGGAAAGGACGCGGTACGGGAAACTATCTCGTTGGAATAGCGAGCCACAGTGCGCCGAACGATAGTAGTGTGTTTCTGCACACGCGCATTGCACCGTACGTGGGATGGATTAAGAGTGTTTTGTGATACAACATACTGAATAAAAGCACAAACAGCAACAACCAcat                                       ]
[+] EMBL BX615610             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CAGTACTACGAAACACAATAACATTGCACTGGTAACGGTAATGCACCGCACCGACATAGCGTTCGGTAAGAGTCCGATCTGTTTGTGGAGCAACCAAACGCACACGCCGTTTTATCTGGAGCAGGTTGGACTAACGGAAGAATCAACGCTTGGTCCAGCCCTTGCATTCACAAAGTTTAACAGTGATTGTGACCGGACGTTTCGGAGAACGTTGAACGACCACGAACTATGCGTAGATGTGGAACAACTGCCATACATGTACACGGTTGAGGTAGATGAAGGCATGCCGGCTTTCTGGAAAGGACGCGGTACCGGCAACTATCTCGTTGGGATAGCGAGCCACAGTGCACCGAACGATAGTCGTGTGTTTCTGCACACGCGCATTGCACCGTACGTAGGATGGATTAAAAGTGTTTTGTGATACAACATACTGAATAAAAGCA AAACTGTA      AATTTGTTAGCAACGTTTTTGAAATAAAACATTATCGATATGT]
[-] EMBL CNS08ZDO             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGGAGTGGTAACGTTAACGCACCGCACCGAAATAGCGTTCGGTAAGAGTCCGATCTGTTTGTGGAGCAACCACACGCACACCCCGTTTTACCTGGAGCAAGTTGGGCTAACGGAAGAATCAACGCTTGGTCCAGCCCTTGCATTCACAAAGTTTAACAGTGATTGTGACCGGACGTTTCGGAGGACGTTGGACGAACACGAACTATGCGTAGATGTGGAACAACTACCATACATGGACACGGTTGAGGTAGATGAAGGCATGCCGGCTTTCTGGAAAGGACGCGGTACGGGAAACTATCTCGTTGGAATAGCGAGCCACAGTGCACCGAACGATAGTAGTGTGTTTCTGCACACGCGCATTGCACCGTACGTGGGATGGATTAAGAGTGTTTTGTGATACAACATACTGAATAAAAGCA AAACAGCAACAACACATTTCTTAGCAACATTTT                        ]
[+] EMBL BM587747             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ccgGGACGTTTCGGAGGACGTTGGACGAACACGAACTATGCGTAGATGTGGAACAACTACCATACATGGACACGGTTGAGGTAGATGAAGGCATGCCGGCTTTCTGGAAAGGACGCGGTACGGGAAACTATCTCGTTGGAATAGCTAGCCACAGTGCACCGAACGATAGTCGTGTGTTTCTGCACACGCGCATTGCACCGTACGTGGGATGGATTAAGAGTGTTTTGTGATACAACATACTGAATAAAAGCA AAACAGC                                                  ]


>consensus_8144#1 TNGCCCGAGGTTAAGCGTGAGGTGTGGCGTTTTGGTCGTAGCCTACCGTACGTGTACGCG CTGAACCTAGCAGGCCGTGACTGTGGCTACGGTGAATCGGCACTCGGCGTTCGGTTAGCT TCCCATCTGACGTGGTTACAATTCGATCCTGTTTCCGCAGAGGGTCGAAAAGATCCTGGG GAAGCGTTCATCTTCCTGAACAATGATTTGGAAGAGGGTGACACGTGTGCGGTGGACGGC GTTGGGATGGGTGTGTGCACAAGTGCCGTGAATTGTCCGAGAATGTTGTACCGCTTTCAG CAAAATCAACCGGTGCGGTTCTGCGGCAGTGGATCGGAATTGTGCTGTCCGCAGGATGAC GTACGGAGTGCGCCAGATGCAGAATGGCGAGAAATCGACAGCTGTGCCACGAGACGGAAT AGCGAGGAGGAAGATTTCGATCCAAGGCGTCATATGGTGTCCTTAGATTTGAGCGAAGGT ATAGAAACGCAGACCTGTATCGCAACAATGATTAGCAACAGAACGTTTTTGACCGCTGCC AGCTGTCTGGAAGGGAAGGGCACGCTCAAATACGTAACGCTAGACAATAGAGAGATTCAA ATGGTTGTCTGGATGGTGGTTGAGAAGGTAACAGTCCATCCAGAGTACGACAGTACTACG AAACGCCACAACATTGCACTGGTAACGTTAACGCACCGCACCGAAATAGCGTTCGGTAAG AGTCCGATCTGTTTGTGGAGCAACCACACGCACACCCCGTTTTACCTGGAGCAAGTTGGG CTAACGGAAGAATCAACGCTTGGTCCAGCCCTTGCATTCACAAAGTTTAACAGTGATTGT GACCGGACGTTTCGGAGGACGTTGGACGAACACGAACTATGCGTAGATGTGGAACAACTA CCATACATGGACACGGTTGAGGTAGATGAAGGCATGCCGGCTTTCTGGAAAGGACGCGGT ACGGGAAACTATCTCGTTGGAATAGCGAGCCACAGTGCACCGAACGATAGTAGTGTGTTT CTGCACACGCGCATTGCACCGTACGTGGGATGGATTAAGAGTGTTTTGTGATACAACATA CTGAATAAAAGCAAAACAGCAACAACCAATTTGTTAGCAACGTTTTTGAAATAAAACATT ATCGATATGT



consensusID : consensus_8144#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 666
fasta sequence
                              [GCAGAATACCCNCGTTATCTGGGGAAGCGTCATCTTCCTGAACATGATTTTGAAGAGGGTGACACGTGTGCGGTGGACGGCGTTGGGATGGGTGTGTGCACAAGTGCCGTGAATTGTCCGAGAATGTTATACCACTTTCGTCAAAATCAACCGGTGCGGTTCTGCGGCAGTGGATCGGAATTGTGCTGTCCGCAGGATGACGTACGGAGTGCGCCAGATGCCACAATGGCGAGAAATCGACAGCTGTGCCACGAGACGGAATAGCGAGGAGGAAGATTTCGATCCAAGGNAACATATTGGTAGGTAAATGTTGATATCCTCTTTTACACGGAATCCTTATTTGGTGGCACAACAACCCANTTTGTAACAGGGTTGTCCGTNTACGANTTTTGCAGCCGNAGGGTACTTACGAACACAGGCAGAACACTTGTAATTACGCAACGCCACAATGAGTTTANGGCCACAAGGCAAACGGATCGATNGACACNGGCGTGGCCANNTCATGGTACTTGGANAAANGGGAAACGGGGNNAAGCGCTCCAAAACGTACGTAAACGGCNANGCACAACATAAGGACACAGAGCTTCACACAANTCGNGTTCNCANCNTCTGCGNATTCGNGATGNTANAGAGAACAAACGGNTAACCCGAGACCCATTCCACGAC]

[+] EMBL AL695501             [GCAGAATACCCNCGTTATCTGGGGAAGCGTCATCTTCCTGAACATGATTTTGAAGAGGGTGACACGTGTGCGGTGGACGGCGTTGGGATGGGTGTGTGCACAAGTGCCGTGAATTGTCCGAGAATGTTATACCACTTTCGTCAAAATCAACCGGTGCGGTTCTGCGGCAGTGGATCGGAATTGTGCTGTCCGCAGGATGACGTACGGAGTGCGCCAGATGCCACAATGGCGAGAAATCGACAGCTGTGCCACGAGACGGAATAGCGAGGAGGAAGATTTCGATCCAAGGNAACATATTGGTAGGTAAATGTTGATATCCTCTTTTACACGGAATCCTTATTTGGTGGCACAACAACCCANTTTGTAACAGGGTTGTCCGTNTACGANTTTTGCAGCCGNAGGGTACTTACGAACACAGGCAGAACACTTGTAATTACGCAACGCCACAATGAGTTTANGGCCACAAGGCAAACGGATCGATNGACACNGGCGTGGCCANNTCATGGTACTTGGANAAANGGGAAACGGGGNNAAGCGCTCCAAAACGTACGTAAACGGCNANGCACAACATAAGGACACAGAGCTTCACACAANTCGNGTTCNCANCNTCTGCGNATTCGNGATGNTANAGAGAACAAACGGNTAACCCGAGACCCATTCCACGAC]


>consensus_8144#2 GCAGAATACCCNCGTTATCTGGGGAAGCGTCATCTTCCTGAACATGATTTTGAAGAGGGT GACACGTGTGCGGTGGACGGCGTTGGGATGGGTGTGTGCACAAGTGCCGTGAATTGTCCG AGAATGTTATACCACTTTCGTCAAAATCAACCGGTGCGGTTCTGCGGCAGTGGATCGGAA TTGTGCTGTCCGCAGGATGACGTACGGAGTGCGCCAGATGCCACAATGGCGAGAAATCGA CAGCTGTGCCACGAGACGGAATAGCGAGGAGGAAGATTTCGATCCAAGGNAACATATTGG TAGGTAAATGTTGATATCCTCTTTTACACGGAATCCTTATTTGGTGGCACAACAACCCAN TTTGTAACAGGGTTGTCCGTNTACGANTTTTGCAGCCGNAGGGTACTTACGAACACAGGC AGAACACTTGTAATTACGCAACGCCACAATGAGTTTANGGCCACAAGGCAAACGGATCGA TNGACACNGGCGTGGCCANNTCATGGTACTTGGANAAANGGGAAACGGGGNNAAGCGCTC CAAAACGTACGTAAACGGCNANGCACAACATAAGGACACAGAGCTTCACACAANTCGNGT TCNCANCNTCTGCGNATTCGNGATGNTANAGAGAACAAACGGNTAACCCGAGACCCATTC CACGAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8144#0      ATCGTGACACTTGCCCGCTGTACAAGGAGGAATGGCTTGCCTCCCGCCTATGTCAGCTAT 60
consensus_8144#2      ------------------------------------------------------------
consensus_8144#1      ------------------------------------------------------------
                                                                                  

consensus_8144#0      CTGGAAAATGAAAGGAACGCTGTCATTCGCTCTTACATACATCCAAATTGGAAAGAGGGA 120
consensus_8144#2      ------------------------------------------------------------
consensus_8144#1      ------------------------------------------------------------
                                                                                  

consensus_8144#0      TCACTTTATGGAGACGTAGGACTTCTTCAACTGAAAGAGCCGTTGAAGATTTCTTTACAA 180
consensus_8144#2      ------------------------------------------------------------
consensus_8144#1      ------------------------------------------------------------
                                                                                  

consensus_8144#0      TTTCAACCAGCTTGCATCTGGGATCGCGCAGACCTTCCTGAGTCGGAGTTTTTTGTTTCT 240
consensus_8144#2      ------------------------------------------------------------
consensus_8144#1      ------------------------------------------------------------
                                                                                  

consensus_8144#0      GGCCGTGGGCTGTCCGAGTTTCATGCTATTCACGTCGAGGAAGATGATTTAGAAACAAGT 300
consensus_8144#2      ------------------------------------------------------------
consensus_8144#1      ------------------------------------------------------------
                                                                                  

consensus_8144#0      GCTTGTAAGTTGCTCTGATGTGCTCTGTAACCCTCTCTCACTTTTTCTAATGACAATATC 360
consensus_8144#2      ------------------------------------------------------------
consensus_8144#1      ------------------------------------------------------------
                                                                                  

consensus_8144#0      ATTTCCTTGTAAGCTTTGAATCACATAATCAATGTTCTTGGAGTAGTAGAGCTTCATAAC 420
consensus_8144#2      ------------------------------------------------------------
consensus_8144#1      ------------------------------------------------------------
                                                                                  

consensus_8144#0      GGCACCAACTGCACGCAGCATCGTAACGAGACGCCGGCCGAACATCTCTGCTTCGGAGCC 480
consensus_8144#2      ------------------------------------------------------------
consensus_8144#1      ------------------------------------------------------------
                                                                                  

consensus_8144#0      AAACCGTTCCTGGTGCCAAGTACCTGTCACCAATCACTGGGTGGTCCGCTAGAGCGTGAA 540
consensus_8144#2      ------------------------------------------------------------
consensus_8144#1      ---------------------------------------TNGCCCGAGGTTAAGCGTGAG 21
                                                                                  

consensus_8144#0      GTGGGGCGTTTTGGTCGTAGCCTACCGTACGTGTACGCGCTGAACCTTGCAGGCCGTGAC 600
consensus_8144#2      ------------------------------------------------------------
consensus_8144#1      GTGTGGCGTTTTGGTCGTAGCCTACCGTACGTGTACGCGCTGAACCTAGCAGGCCGTGAC 81
                                                                                  

consensus_8144#0      TGTGGTTACGGTGAATCGGCACTCGGCGTTCGGTTAGCGTCCCATCTGGCGTGGTT-CAA 659
consensus_8144#2      ------------------------------------------------------------
consensus_8144#1      TGTGGCTACGGTGAATCGGCACTCGGCGTTCGGTTAGCTTCCCATCTGACGTGGTTACAA 141
                                                                                  

consensus_8144#0      TTCGATCCTGTTTCCGAAGAGGGTCGAAGAAGATCCCGCGGAAGCTTTCATCTTCCTGAA 719
consensus_8144#2      ---------------GCAGAATACCCNCGTTA--TCTGGGGAAGCGT-CATCTTCCTGAA 42
consensus_8144#1      TTCGATCCTGTTTCCGCAGAGGGTCGAAAAGA-TCCTGGGGAAGCGTTCATCTTCCTGAA 200
                                     * ***    *          * * ****** * ************

consensus_8144#0      CAATGATTTGGAAGAGGGTGACACGTGTGCGGTGGACGGCGTTGGGATGGGTGTGTGCAC 779
consensus_8144#2      CA-TGATTTTGAAGAGGGTGACACGTGTGCGGTGGACGGCGTTGGGATGGGTGTGTGCAC 101
consensus_8144#1      CAATGATTTGGAAGAGGGTGACACGTGTGCGGTGGACGGCGTTGGGATGGGTGTGTGCAC 260
                      ** ****** **************************************************

consensus_8144#0      AAGTGCAGTGAATTGTCCGAGAATGTTGTACCGCTTTCAGCAAAATCAACCGGTGCAGTT 839
consensus_8144#2      AAGTGCCGTGAATTGTCCGAGAATGTTATACCACTTTCGTCAAAATCAACCGGTGCGGTT 161
consensus_8144#1      AAGTGCCGTGAATTGTCCGAGAATGTTGTACCGCTTTCAGCAAAATCAACCGGTGCGGTT 320
                      ****** ******************** **** *****  **************** ***

consensus_8144#0      CTGTGGCAGTGGAACGGTGTTGTGCTGTCCGCGGGAGGACGTACGGAGTGCGCTAGATGC 899
consensus_8144#2      CTGCGGCAGTGGATCGGAATTGTGCTGTCCGCAGGATGACGTACGGAGTGCGCCAGATGC 221
consensus_8144#1      CTGCGGCAGTGGATCGGAATTGTGCTGTCCGCAGGATGACGTACGGAGTGCGCCAGATGC 380
                      *** ********* ***  ************* *** **************** ******

consensus_8144#0      -AGAATGGCGAGAAATCGACAGCTGTGCCACGAGACGGAATAGCGAGGAGGATGATTTCG 958
consensus_8144#2      CACAATGGCGAGAAATCGACAGCTGTGCCACGAGACGGAATAGCGAGGAGGAAGATTTCG 281
consensus_8144#1      -AGAATGGCGAGAAATCGACAGCTGTGCCACGAGACGGAATAGCGAGGAGGAAGATTTCG 439
                       * ************************************************* *******

consensus_8144#0      ATCCAAGGCACCATAT-GGTAGGTAAATGTTGATATCCTCTTT---ACGGA-TCCTTATT 1013
consensus_8144#2      ATCCAAGGNAACATATTGGTAGGTAAATGTTGATATCCTCTTTTACACGGAATCCTTATT 341
consensus_8144#1      ATCCAAGGCGTCATAT-----GGTGTCCTTAGATTTGAGCGAAGGTATAGAAACGCAGAC 494
                      ********   *****     ***     * *** *   *      *  **  *      

consensus_8144#0      TGT--GCACAA--ACC--ATTCGTA-CAGG--TATCCTTA---GATTTG---AGCCAAGG 1058
consensus_8144#2      TGGTGGCACAACAACCCANTTTGTAACAGGGTTGTCCGTNTACGANTTTTGCAGCCGNAG 401
consensus_8144#1      CTGTATCGCAACAATG--ATTAGCAACAGAA-CGTTTTTGACCGCTGCC---AGCTGTCT 548
                            * ***  *     ** * * ***     *   *    *        ***     

consensus_8144#0      GATAGAAACGCAGACTTGTATCGCAACAATGATTA------GCAACAGAACGTTT---TT 1109
consensus_8144#2      GGTACTTACGAACACAGGCAGAACACTTGTAATTACGCAACGCCACAATGAGTTT---AN 458
consensus_8144#1      GGAAGGGAAGGGCACGCTCA-AATACGTAACGCTAG-----ACAATAGAGAGATTCAAAT 602
                      *  *   * *   **    *    *        **       * * *    * **     

consensus_8144#0      GACCGCT--GCCAGCTGTCTGGACGGGAAAAGCACGCTCAAATACGTAACA-TTAGACAA 1166
consensus_8144#2      GGCCACAAGGCAAACGGATCGATNGACACNGGCGTGGCCANNT-CATGGTACTTGGANAA 517
consensus_8144#1      GGTTGTCTGGATGGTGGTTGAGAAGGTAACAGTCCATCCAGAG-TACGACAGTACTACGA 661
                      *        *      *       *  *   *      **          * *   *  *

consensus_8144#0      TAGA--GAGATTCAATGGTTGTCTTGAT-------------------------------- 1192
consensus_8144#2      ANGG--GAAACGGGGNNAAGCGCTCCAAAACGTACGTAAACGGCNANGCACAACATAAGG 575
consensus_8144#1      AACGCCACAACATTGCACTGGTAACGTTAACGCACCGCACCGAAATAGCGTTCGGTAAGA 721
                               *                                                  

consensus_8144#0      ------------------------------------------------------------
consensus_8144#2      ACACAGAGCTTCACACAANTCGNGTTCNCANCNTCTGCGNATTCGNGATGNTANAGAGAA 635
consensus_8144#1      GT-CCGATCTGTTTGTGGAGCAACCACACGCACACCCCGTTTTACCTGGAGCAAGTTGGG 780
                                                                                  

consensus_8144#0      ------------------------------------------------------------
consensus_8144#2      CAAACGGNTAACCCGAGACCCATTCCACGAC----------------------------- 666
consensus_8144#1      CTAACGGAAGAATCAACGCTTGGTCCAGCCCTTGCATTCACAAAGTTTAACAGTGATTGT 840
                                                                                  

consensus_8144#0      ------------------------------------------------------------
consensus_8144#2      ------------------------------------------------------------
consensus_8144#1      GACCGGACGTTTCGGAGGACGTTGGACGAACACGAACTATGCGTAGATGTGGAACAACTA 900
                                                                                  

consensus_8144#0      ------------------------------------------------------------
consensus_8144#2      ------------------------------------------------------------
consensus_8144#1      CCATACATGGACACGGTTGAGGTAGATGAAGGCATGCCGGCTTTCTGGAAAGGACGCGGT 960
                                                                                  

consensus_8144#0      ------------------------------------------------------------
consensus_8144#2      ------------------------------------------------------------
consensus_8144#1      ACGGGAAACTATCTCGTTGGAATAGCGAGCCACAGTGCACCGAACGATAGTAGTGTGTTT 1020
                                                                                  

consensus_8144#0      ------------------------------------------------------------
consensus_8144#2      ------------------------------------------------------------
consensus_8144#1      CTGCACACGCGCATTGCACCGTACGTGGGATGGATTAAGAGTGTTTTGTGATACAACATA 1080
                                                                                  

consensus_8144#0      ------------------------------------------------------------
consensus_8144#2      ------------------------------------------------------------
consensus_8144#1      CTGAATAAAAGCAAAACAGCAACAACCAATTTGTTAGCAACGTTTTTGAAATAAAACATT 1140
                                                                                  

consensus_8144#0      ----------
consensus_8144#2      ----------
consensus_8144#1      ATCGATATGT 1150
                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)