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Anopheles gambiae
cluster # 8168 cluster # 8168       Sequences # 9       consensus # 7


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8168#0 length = 973 sequences # 2  
consensus_8168#1 length = 886 sequences # 2  
consensus_8168#2 length = 667 sequences # 1  
consensus_8168#3 length = 635 sequences # 1  
consensus_8168#4 length = 562 sequences # 1  
consensus_8168#5 length = 538 sequences # 1  
consensus_8168#6 length = 357 sequences # 1  

consensusID : consensus_8168#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 973
fasta sequence
                              [GAACGGGGCCGCCATCGACGTGACGAACGAGAACAAGGACGAGTACATCCGGCTGGTCATCCAGTGGCGGTTCGTGTCGCGCGTCCAGGTGCAGATGCAAGCGTTCCTGGACGGGTTCGGTTCGCTGGTGCCGCTCAACCTGCTCAAGATCTTCGACGAGCACGAGCTGGAGCTGCTGATGTGCGGCATCCAGAACATTGACCTGCGGGACTGGAAGCGCAACACGCTGTACAAGGGCGACTACTACCCGAACCACGTCGTCATCCAGTGGTTCTGGCGGGCGGTGCTGTCCTTCTCGAACGAGATGCGCGCCCGACTGCTGCAGTTCGTGACCGGCACGTCCCGCGTCCCGATGAACGGCTTCAAGGAGCTGTACGGCTCGAACGGCCCGCAAATGTTCACGATCGAGAAGTGGGGCACGCCGGAAAACTACCCCCGGGCACACACGTGCTTCAATCGATTAGACTTGCCACCGTACGAAAGCTACCAGCAGCTGAAGGATCGTCTCATTCAGGCCGTCGAGGGCAGTCAGGGTTTCGCCGGCGTCGATTAGATATGTTTGCGATACTCACGGTGTGTGTCTGTGTTTTGGTGTGGTCGCTTACTGCAACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGACACAGAACATACACACGCCCCGTCCACACACAGTATGCCATCACACGTTCAATAAGAAGAAACGAAACAACAATACGGTTAGAGAAATTTCTTAGCTTCGCAAGCAACACATGGGCTCGCTCCCTTCTCCGAACCCCTCCCACTGTACGCCGTCAGCCGGGGCTGCGCGATCCCAGTCCGATAGATCGGCCAAGCCAAGCCAAGAAGATGCCGACGGTGGGACGGCTCATGACAATCAAGTGTACACACGCTCGGGTCGGGGGTTTGCTCGAACATGTGTGGGTAGTTAGGGTAGGCGTAATAGAAATAGCTAGGC]

[+] EMBL BX609399             [GAACGGGGCCGCCATCGACGTGACGAACGAGAACAAGGACGAGTACATCCGGCTGGTCATCCAGTGGCGGTTCGTGTCGCGCGTCCAGGTGCAGATGCAAGCGTTCCTGGACGGGTTCGGTTCGCTGGTGCCGCTCAACCTGCTCAAGATCTTCGACGAGCACGAGCTGGAGCTGCTGATGTGCGGCATCCAGAACATTGACCTGCGGGACTGGAAGCGCAACACGCTGTACAAGGGCGACTACTACCCGAACCACGTCGTCATCCAGTGGTTCTGGCGGGCGGTGCTGTCCTTCTCGAACGAGATGCGCGCCCGACTGCTGCAGTTCGTGACCGGCACGTCCCGCGTCCCGATGAACGGCTTCAAGGAGCTGTACGGCTCGAACGGCCCGCAAATGTTCACGATCGAGAAGTGGGGCACGCCGGAAAACTACCCCCGGGCACACACGTGCTTCAATCGATTAGACTTGCCACCGTACGAAAGCTACCAGCAGCTGAAGGATCGTCTCATTCAGGCCGTCGAGGGCAGTCAGGGTTTCGCCGGCGTCGATTAGATATGTTTGCGATACTCACGGTGTGTGTCTGTGTTTTGGTGTGGTCGCTTACTGCAACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX627138             [                                                                                                                                                                                                                                                                                                            CGAGATGCGCGCCCGACTGCTGCAGTTCGTGACCGGCACGTCCCGCGTCCCGATGAACGGCTTCAAGGAGCTGTACGGCTCGAACGGCCCGCAAATGTTCACGATCGAGAAGTGGGGCACGCCGGAAAACTACCCCCGGGCACACACGTGCTTCAATCGATTAGACTTGCCACCGTACGAAAGCTACCAGCAGCTGAAGGATCGTCTCATTCAGGCCGTCGAGGGCAGTCAGGGTTTCGCCGGCGTCGATTAGATATGTTTGCGATACTCACGGTGTGTGTCTGTGTTTTGGTGTGGTCGCTTACTGCAACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGACACAGAACATACACACGCCCCGTCCACACACAGTATGCCATCACACGTTCAATAAGAAGAAACGAAACAACAATACGGTTAGAGAAATTTCTTAGCTTCGCAAGCAACACATGGGCTCGCTCCCTTCTCCGAACCCCTCCCACTGTACGCCGTCAGCCGGGGCTGCGCGATCCCAGTCCGATAGATCGGCCAAGCCAAGCCAAGAAGATGCCGACGGTGGGACGGCTCATGACAATCAAGTGTACACACGCTCGGGTCGGGGGTTTGCTCGAACATGTGTGGGTAGTTAGGGTAGGCGTAATAGAAATAGCTAGGC]


>consensus_8168#0 GAACGGGGCCGCCATCGACGTGACGAACGAGAACAAGGACGAGTACATCCGGCTGGTCAT CCAGTGGCGGTTCGTGTCGCGCGTCCAGGTGCAGATGCAAGCGTTCCTGGACGGGTTCGG TTCGCTGGTGCCGCTCAACCTGCTCAAGATCTTCGACGAGCACGAGCTGGAGCTGCTGAT GTGCGGCATCCAGAACATTGACCTGCGGGACTGGAAGCGCAACACGCTGTACAAGGGCGA CTACTACCCGAACCACGTCGTCATCCAGTGGTTCTGGCGGGCGGTGCTGTCCTTCTCGAA CGAGATGCGCGCCCGACTGCTGCAGTTCGTGACCGGCACGTCCCGCGTCCCGATGAACGG CTTCAAGGAGCTGTACGGCTCGAACGGCCCGCAAATGTTCACGATCGAGAAGTGGGGCAC GCCGGAAAACTACCCCCGGGCACACACGTGCTTCAATCGATTAGACTTGCCACCGTACGA AAGCTACCAGCAGCTGAAGGATCGTCTCATTCAGGCCGTCGAGGGCAGTCAGGGTTTCGC CGGCGTCGATTAGATATGTTTGCGATACTCACGGTGTGTGTCTGTGTTTTGGTGTGGTCG CTTACTGCAACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGACAC AGAACATACACACGCCCCGTCCACACACAGTATGCCATCACACGTTCAATAAGAAGAAAC GAAACAACAATACGGTTAGAGAAATTTCTTAGCTTCGCAAGCAACACATGGGCTCGCTCC CTTCTCCGAACCCCTCCCACTGTACGCCGTCAGCCGGGGCTGCGCGATCCCAGTCCGATA GATCGGCCAAGCCAAGCCAAGAAGATGCCGACGGTGGGACGGCTCATGACAATCAAGTGT ACACACGCTCGGGTCGGGGGTTTGCTCGAACATGTGTGGGTAGTTAGGGTAGGCGTAATA GAAATAGCTAGGC



consensusID : consensus_8168#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 886
fasta sequence
                              [CCGCGCAGTGGGACGATCCGCGGCTGTCCAATCCAAAGATCGCTGGTCAGGCGGTACCGTACTCGCGCGACTACAAGCAGAAGTACGAGTACTTCAAGAGCCAGCTGCAGAAACCGAGCAACGTGCCAAATAAGATCGACATCAAGGTGCGGCGGGCGTCCATACTGGAGGATTCGTATCGCGTCATCAACTCGGTCACGCGGCTCGACCTGCTCAAGACGAAGCTGTGGGTCGAGTTCGAGGGCGAGACGGGGCTGGATTATGGGGGGCTGGCGCGCGAGTGGTTCTACCTGCTGTCGAAGGAGATGTTCAACCCGTACTACGGCCTGTTTGAGTACTCGGCGATGGACAACTACACACTGCAGATCAACCCCAACAGTGGGCTGTGCAATGAGGAGCATTTGAACTACTTCCGGTTTATCGGGCGCATTGCGGGCATGGCAATCTACCACGGTAAGCTGCTGGATGCGTTCTTCATCCGACCGTTCTACAAGATGATGCTGCAGAAGTCGATCGACCTGAAGGACATGGGAGGCGGTCGACACGGAGTACTACAACTCGCTGCTCTACATCAAGGAGAACGATCCGAGCACGCTGATGCTCACGTTCAGCGTGGACGAGGAAAGCTTCGGCACGACGAACCAGCGCGAGCTGAAACCGAACGGGGCCGATCTGGAGGTGAGCAACGAGAACAAGGACGAGTACATTCTGCTCGTGATCGACTGGCGGTTCGAGGCGCGCGTCAAGGACCAGATGCAAGCGTTCCTGGAGGGCGTCAGCTCGCTGGTGCCGCTGCATTTGCTCAAGATTTTCGACGAGAACGAGCTGGAGCTGCTGATGTGCGGCATCCAGAGCATCGACGTGAACGACTGGAAGAAGAACACGA]

[+] EMBL BM604479             [CCGCGCAGTGGGACGATCCGCGGCTGTCCAATCCAAAGATCGCTGGTCAGGCGGTACCGTACTCGCGCGACTACAAGCAGAAGTACGAGTACTTCAAGAGCCAGCTGCAGAAACCGAGCAACGTGCCAAATAAGATCGACATCAAGGTGCGGCGGGCGTCCATACTGGAGGATTCGTATCGCGTCATCAACTCGGTCACGCGGCTCGACCTGCTCAAGACGAAGCTGTGGGTCGAGTTCGAGGGCGAGACGGGGCTGGATTATGGGGGGCTGGCGCGCGAGTGGTTCTACCTGCTGTCGAAGGAGATGTTCAACCCGTACTACGGCCTGTTTGAGTACTCGGCGATGGACAACTACACACTGCAGATCAACCCCAACAGTGGGCTGTGCAATGAGGAGCATTTGAACTACTTCCGGTTTATCGGGCGCATTGCGGGCATGGCAATCTACCACGGTAAGCTGCTGGATGCGTTCTTCATCCGACCGTTCTACAAGATGATGCTGCAGAAGTCGATCGACCTGAAGGACATGGGAGGCGGTCGACACGGAGTACTACAACTCGCTGCTCTACATCAAGGAGAACGATCCGAGCACGCTGATGCTCACGTTCAGCGTGGACGAGGAAAGCTTCGGCACGACGAACCAGCGCGAGCTGAAACCGAACGGGGCCGATCTGGAGGT                                                                                                                                                                                                              ]
[+] EMBL BM620490             [                                                                                                                                                                                                                                                                                                                                                                   CACACTGCAGATCAACCCCAACAGTGGGCTGTGCAATGAGGAGCATTTGAACTACTTCCGGTTTATCGGGCGCATTGCGGGCATGGCAATCTACCACGGCAAGCTGCTGGATGCGTTCTTCATCCGACCGTTCTACAAGATGATGCTGCAGAAGTCGATCGACCTGAAGGACAT GGAGGCGGTCGACACGGAGTACTACAACTCGCTGCTCTACATCAAGGAGAACGATCCCAGCACGCTGATGCTTACGTTCAGCGTGGACGAGGAAAGTTTCGGCACGACGAACCAGCGCGAGCTGAAACCAAGCGGGGCCTATCTGGAGGGGAGCAACGAGAACAAGGACGAGTACATTCTGCTCGTGATCGACTGGCGGTTCGAGGCGCGCGTCAAGGACCAGATGCAAGCGTTCCTGGAGGGCGTCAGCTCGCTGGTGCCGCTGCATTTGCTCAAGATTTTCGACGAGAACGAGCTGGAGCTGCTGATGTGCGGCATCCAGAGCATCGACGTGAACGACTGGAAGAAGAACACGA]


>consensus_8168#1 CCGCGCAGTGGGACGATCCGCGGCTGTCCAATCCAAAGATCGCTGGTCAGGCGGTACCGT ACTCGCGCGACTACAAGCAGAAGTACGAGTACTTCAAGAGCCAGCTGCAGAAACCGAGCA ACGTGCCAAATAAGATCGACATCAAGGTGCGGCGGGCGTCCATACTGGAGGATTCGTATC GCGTCATCAACTCGGTCACGCGGCTCGACCTGCTCAAGACGAAGCTGTGGGTCGAGTTCG AGGGCGAGACGGGGCTGGATTATGGGGGGCTGGCGCGCGAGTGGTTCTACCTGCTGTCGA AGGAGATGTTCAACCCGTACTACGGCCTGTTTGAGTACTCGGCGATGGACAACTACACAC TGCAGATCAACCCCAACAGTGGGCTGTGCAATGAGGAGCATTTGAACTACTTCCGGTTTA TCGGGCGCATTGCGGGCATGGCAATCTACCACGGTAAGCTGCTGGATGCGTTCTTCATCC GACCGTTCTACAAGATGATGCTGCAGAAGTCGATCGACCTGAAGGACATGGGAGGCGGTC GACACGGAGTACTACAACTCGCTGCTCTACATCAAGGAGAACGATCCGAGCACGCTGATG CTCACGTTCAGCGTGGACGAGGAAAGCTTCGGCACGACGAACCAGCGCGAGCTGAAACCG AACGGGGCCGATCTGGAGGTGAGCAACGAGAACAAGGACGAGTACATTCTGCTCGTGATC GACTGGCGGTTCGAGGCGCGCGTCAAGGACCAGATGCAAGCGTTCCTGGAGGGCGTCAGC TCGCTGGTGCCGCTGCATTTGCTCAAGATTTTCGACGAGAACGAGCTGGAGCTGCTGATG TGCGGCATCCAGAGCATCGACGTGAACGACTGGAAGAAGAACACGA



consensusID : consensus_8168#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 667
fasta sequence
                              [CCGTATATGCGTGTGTGGGGCCGATTCCCGTAAAAAGGATTTGCGGAGTGTTGCAAACCGGATAGGGGTTTTTTTTTTCGTGTGGGGGTGAAGAGTTGTGCAAAGAGTTGTCTGTTTTTGGCTCAGCTCTTATCTCTCTTGCATCCCCCACTCCCCCTCCTGCCGCCGTCGCCGTTGTATTTTTCATCCTAATCCAATCCAAACGTTTCTGTGTACTATGTTTGCTCGTTGTTACTTAATTCGTTGTTCGTGGCTGTTTGGGCCACAGGCGTAGCGTGTGATGCTTGTTATATCCCTGCAAGGCTACAAAGGCTAGGTGAGAAACTTAACAACAAGAGAAAAAAAGGAGAGAAGACATAAACAAAACAGAATATTTATATACGATAATCCATCCCTCGTGCTTTACCATTGCGAGCTGCAGAAGAATAATGTTACAAGGCTATATTTATTGATTCCTCTGCCAGTGCGACTGTGTGGGGCCCGTGTTTGTGAAGGGCCGGAACAGGAGCGGCAAATAAAAACCAACAGATACTACACTAAAACGGGAAGGGGATTGTAATAAAGGCGGTTTGTTTTTACGAAGCGCGAACGAAATCAATTTGTTAGAGAAGAAGAGAAAGTGATGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCACGGAT]

[+] EMBL BM623443             [CCGTATATGCGTGTGTGGGGCCGATTCCCGTAAAAAGGATTTGCGGAGTGTTGCAAACCGGATAGGGGTTTTTTTTTTCGTGTGGGGGTGAAGAGTTGTGCAAAGAGTTGTCTGTTTTTGGCTCAGCTCTTATCTCTCTTGCATCCCCCACTCCCCCTCCTGCCGCCGTCGCCGTTGTATTTTTCATCCTAATCCAATCCAAACGTTTCTGTGTACTATGTTTGCTCGTTGTTACTTAATTCGTTGTTCGTGGCTGTTTGGGCCACAGGCGTAGCGTGTGATGCTTGTTATATCCCTGCAAGGCTACAAAGGCTAGGTGAGAAACTTAACAACAAGAGAAAAAAAGGAGAGAAGACATAAACAAAACAGAATATTTATATACGATAATCCATCCCTCGTGCTTTACCATTGCGAGCTGCAGAAGAATAATGTTACAAGGCTATATTTATTGATTCCTCTGCCAGTGCGACTGTGTGGGGCCCGTGTTTGTGAAGGGCCGGAACAGGAGCGGCAAATAAAAACCAACAGATACTACACTAAAACGGGAAGGGGATTGTAATAAAGGCGGTTTGTTTTTACGAAGCGCGAACGAAATCAATTTGTTAGAGAAGAAGAGAAAGTGATGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCACGGAT]


>consensus_8168#2 CCGTATATGCGTGTGTGGGGCCGATTCCCGTAAAAAGGATTTGCGGAGTGTTGCAAACCG GATAGGGGTTTTTTTTTTCGTGTGGGGGTGAAGAGTTGTGCAAAGAGTTGTCTGTTTTTG GCTCAGCTCTTATCTCTCTTGCATCCCCCACTCCCCCTCCTGCCGCCGTCGCCGTTGTAT TTTTCATCCTAATCCAATCCAAACGTTTCTGTGTACTATGTTTGCTCGTTGTTACTTAAT TCGTTGTTCGTGGCTGTTTGGGCCACAGGCGTAGCGTGTGATGCTTGTTATATCCCTGCA AGGCTACAAAGGCTAGGTGAGAAACTTAACAACAAGAGAAAAAAAGGAGAGAAGACATAA ACAAAACAGAATATTTATATACGATAATCCATCCCTCGTGCTTTACCATTGCGAGCTGCA GAAGAATAATGTTACAAGGCTATATTTATTGATTCCTCTGCCAGTGCGACTGTGTGGGGC CCGTGTTTGTGAAGGGCCGGAACAGGAGCGGCAAATAAAAACCAACAGATACTACACTAA AACGGGAAGGGGATTGTAATAAAGGCGGTTTGTTTTTACGAAGCGCGAACGAAATCAATT TGTTAGAGAAGAAGAGAAAGTGATGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAC CACGGAT



consensusID : consensus_8168#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 635
fasta sequence
                              [TACCAAGGTACGCTAAATCGTTGCTATTTTTAACTAACGAAGCAAAGCTAAAAGGATGTACTATATTTAAACGAAACCACTCAATACCCCATTGTAGCGTGGAAAAGAGAGAGAACATGGAGCAGGCTGGAAAACAACAAGGAAAAACAAAAAAAAAACAAATGGCTGTTATATATATATATATATGCGTGTGTGGGGCCGATTCCCGTAAAAAGGATTTGCGGAGTGTTGCAAACCGGATAGGGGTTTTTTTTTCGTGTGGGGGTGAAGAGTTGTGCAAAGAGTTGTCTGTTTTTGGCTCAGCTCTTATCTCTCTTGCATCCCCCACTCCCCCTCCTGCCGCCGTCGCCGTTGTATTTTTCATCCTAATCCAATCCAAACGTTTCTGTGTACTATGTTTGCTCGAACATGTGTGGTTAGTTAGGTTAGGCGTAATAGAAATAGCTAGGCTCTAGGGATAGGAGAAGACGGGTGCGGCAGGCCAACACAGCAACACAGGCCCGGTGAGCGAAACTTAAACAACGTGATATTTGATACCAGCTGCCAAAAAAAGGAAGGAAAACAAGGATAAAGAAACATAATCGAAGGGTAGAAACTCTTGTGCGCGATAACCAAACGGCAACAAACCGTGCAAA]

[+] EMBL BX616136             [TACCAAGGTACGCTAAATCGTTGCTATTTTTAACTAACGAAGCAAAGCTAAAAGGATGTACTATATTTAAACGAAACCACTCAATACCCCATTGTAGCGTGGAAAAGAGAGAGAACATGGAGCAGGCTGGAAAACAACAAGGAAAAACAAAAAAAAAACAAATGGCTGTTATATATATATATATATGCGTGTGTGGGGCCGATTCCCGTAAAAAGGATTTGCGGAGTGTTGCAAACCGGATAGGGGTTTTTTTTTCGTGTGGGGGTGAAGAGTTGTGCAAAGAGTTGTCTGTTTTTGGCTCAGCTCTTATCTCTCTTGCATCCCCCACTCCCCCTCCTGCCGCCGTCGCCGTTGTATTTTTCATCCTAATCCAATCCAAACGTTTCTGTGTACTATGTTTGCTCGAACATGTGTGGTTAGTTAGGTTAGGCGTAATAGAAATAGCTAGGCTCTAGGGATAGGAGAAGACGGGTGCGGCAGGCCAACACAGCAACACAGGCCCGGTGAGCGAAACTTAAACAACGTGATATTTGATACCAGCTGCCAAAAAAAGGAAGGAAAACAAGGATAAAGAAACATAATCGAAGGGTAGAAACTCTTGTGCGCGATAACCAAACGGCAACAAACCGTGCAAA]


>consensus_8168#3 TACCAAGGTACGCTAAATCGTTGCTATTTTTAACTAACGAAGCAAAGCTAAAAGGATGTA CTATATTTAAACGAAACCACTCAATACCCCATTGTAGCGTGGAAAAGAGAGAGAACATGG AGCAGGCTGGAAAACAACAAGGAAAAACAAAAAAAAAACAAATGGCTGTTATATATATAT ATATATGCGTGTGTGGGGCCGATTCCCGTAAAAAGGATTTGCGGAGTGTTGCAAACCGGA TAGGGGTTTTTTTTTCGTGTGGGGGTGAAGAGTTGTGCAAAGAGTTGTCTGTTTTTGGCT CAGCTCTTATCTCTCTTGCATCCCCCACTCCCCCTCCTGCCGCCGTCGCCGTTGTATTTT TCATCCTAATCCAATCCAAACGTTTCTGTGTACTATGTTTGCTCGAACATGTGTGGTTAG TTAGGTTAGGCGTAATAGAAATAGCTAGGCTCTAGGGATAGGAGAAGACGGGTGCGGCAG GCCAACACAGCAACACAGGCCCGGTGAGCGAAACTTAAACAACGTGATATTTGATACCAG CTGCCAAAAAAAGGAAGGAAAACAAGGATAAAGAAACATAATCGAAGGGTAGAAACTCTT GTGCGCGATAACCAAACGGCAACAAACCGTGCAAA



consensusID : consensus_8168#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 562
fasta sequence
                              [CCGCCCACGCGTCCGGAGCAACGTGCCAAATAAGATCGACATCAAGGTGCGGCGGGCGTCCATACTGGAGGATTCCTATCGCGTCATCAGCTCGGTCACGCTGCTCAACCTGCTCAAGACGAAGCTGTGGGTCGAGTTCGAGGGCGAGACGGGGCTGGATTATGGGGGGCTGGCGCGCGAGTGGTTCTACCTGCTGTCGAAGGAGATGTTCAACCCGTACTACGGCCTGTTTGAGTACTCGGAGATGGACAACTACACACTGCAGATCAACCCCAACAGTGGGCTGTGCAATGAGGAGCATTTGAACTACTTCCGGTTTATCGGGCGCATTGCGGGCATGGCAATCTACCACGGTAAGCTGCTGGATGCGTTCTTCATCCGACCGATCTACAAGATGATGCTGCAGAAGTCGATCGACCTGAAGGACATGGAGGCGGACGACACGGAGTACTACAACTCGCTGCTCTACATCAAGGAGAACGATCCCAGCACGCTGATGCTTACGTTCAGCGTGGACGAGGAAAGTTTCGGCACGACGAACCAGCGCGAGCTGAAACCAAAC]

[+] EMBL BM608365             [CCGCCCACGCGTCCGGAGCAACGTGCCAAATAAGATCGACATCAAGGTGCGGCGGGCGTCCATACTGGAGGATTCCTATCGCGTCATCAGCTCGGTCACGCTGCTCAACCTGCTCAAGACGAAGCTGTGGGTCGAGTTCGAGGGCGAGACGGGGCTGGATTATGGGGGGCTGGCGCGCGAGTGGTTCTACCTGCTGTCGAAGGAGATGTTCAACCCGTACTACGGCCTGTTTGAGTACTCGGAGATGGACAACTACACACTGCAGATCAACCCCAACAGTGGGCTGTGCAATGAGGAGCATTTGAACTACTTCCGGTTTATCGGGCGCATTGCGGGCATGGCAATCTACCACGGTAAGCTGCTGGATGCGTTCTTCATCCGACCGATCTACAAGATGATGCTGCAGAAGTCGATCGACCTGAAGGACATGGAGGCGGACGACACGGAGTACTACAACTCGCTGCTCTACATCAAGGAGAACGATCCCAGCACGCTGATGCTTACGTTCAGCGTGGACGAGGAAAGTTTCGGCACGACGAACCAGCGCGAGCTGAAACCAAAC]


>consensus_8168#4 CCGCCCACGCGTCCGGAGCAACGTGCCAAATAAGATCGACATCAAGGTGCGGCGGGCGTC CATACTGGAGGATTCCTATCGCGTCATCAGCTCGGTCACGCTGCTCAACCTGCTCAAGAC GAAGCTGTGGGTCGAGTTCGAGGGCGAGACGGGGCTGGATTATGGGGGGCTGGCGCGCGA GTGGTTCTACCTGCTGTCGAAGGAGATGTTCAACCCGTACTACGGCCTGTTTGAGTACTC GGAGATGGACAACTACACACTGCAGATCAACCCCAACAGTGGGCTGTGCAATGAGGAGCA TTTGAACTACTTCCGGTTTATCGGGCGCATTGCGGGCATGGCAATCTACCACGGTAAGCT GCTGGATGCGTTCTTCATCCGACCGATCTACAAGATGATGCTGCAGAAGTCGATCGACCT GAAGGACATGGAGGCGGACGACACGGAGTACTACAACTCGCTGCTCTACATCAAGGAGAA CGATCCCAGCACGCTGATGCTTACGTTCAGCGTGGACGAGGAAAGTTTCGGCACGACGAA CCAGCGCGAGCTGAAACCAAAC



consensusID : consensus_8168#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 538
fasta sequence
                              [GCCTCAGGCAGAATCGCCACGAGGTGTNANGACACGGAGTTACTACAAACTCGCTGCTCTACATCAAGGGAGAACGATCCGAGCACGCTGATGCTTACGTTCAGCGTGGACGAGGAAAGCTTCGGCACGACGAACCAGCGCGAGCTGAAACCGAACGGGGCCGATCTGGAGGTGAGCAACGAGAACAAGGACGAGTACATCCGGCGTCGTGATCGACTGGCGGTTCGAGGCGCGCGTCAAGGACCAGATGCAAGCGTTCCTGGAGGGCGTCAGCTCGCTGGTGCCCGCTNCATTTGCTCAAGGATTTTCGACGAGAACGAGCTGGACGCTGCCTGATGTGCGGCCATCCAGAGCATCGACGTGAACGACGTGGGAAGGAAGAAACACCGATAGTTACAAACGGGCGGACTACTTAGCGGCGAAACCATAGCGGNTGGGTGCAAGATTGGTTCCTGGGCAGACGCCCGGTTTCGTAGTCCTTTCAACCAACTGNAAAACTTGCCGCNTCCCCAGGGGNATTGCTTTGNCAGGAGATCTN]

[+] EMBL BX469083             [GCCTCAGGCAGAATCGCCACGAGGTGTNANGACACGGAGTTACTACAAACTCGCTGCTCTACATCAAGGGAGAACGATCCGAGCACGCTGATGCTTACGTTCAGCGTGGACGAGGAAAGCTTCGGCACGACGAACCAGCGCGAGCTGAAACCGAACGGGGCCGATCTGGAGGTGAGCAACGAGAACAAGGACGAGTACATCCGGCGTCGTGATCGACTGGCGGTTCGAGGCGCGCGTCAAGGACCAGATGCAAGCGTTCCTGGAGGGCGTCAGCTCGCTGGTGCCCGCTNCATTTGCTCAAGGATTTTCGACGAGAACGAGCTGGACGCTGCCTGATGTGCGGCCATCCAGAGCATCGACGTGAACGACGTGGGAAGGAAGAAACACCGATAGTTACAAACGGGCGGACTACTTAGCGGCGAAACCATAGCGGNTGGGTGCAAGATTGGTTCCTGGGCAGACGCCCGGTTTCGTAGTCCTTTCAACCAACTGNAAAACTTGCCGCNTCCCCAGGGGNATTGCTTTGNCAGGAGATCTN]


>consensus_8168#5 GCCTCAGGCAGAATCGCCACGAGGTGTNANGACACGGAGTTACTACAAACTCGCTGCTCT ACATCAAGGGAGAACGATCCGAGCACGCTGATGCTTACGTTCAGCGTGGACGAGGAAAGC TTCGGCACGACGAACCAGCGCGAGCTGAAACCGAACGGGGCCGATCTGGAGGTGAGCAAC GAGAACAAGGACGAGTACATCCGGCGTCGTGATCGACTGGCGGTTCGAGGCGCGCGTCAA GGACCAGATGCAAGCGTTCCTGGAGGGCGTCAGCTCGCTGGTGCCCGCTNCATTTGCTCA AGGATTTTCGACGAGAACGAGCTGGACGCTGCCTGATGTGCGGCCATCCAGAGCATCGAC GTGAACGACGTGGGAAGGAAGAAACACCGATAGTTACAAACGGGCGGACTACTTAGCGGC GAAACCATAGCGGNTGGGTGCAAGATTGGTTCCTGGGCAGACGCCCGGTTTCGTAGTCCT TTCAACCAACTGNAAAACTTGCCGCNTCCCCAGGGGNATTGCTTTGNCAGGAGATCTN



consensusID : consensus_8168#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 357
fasta sequence
                              [AGGCAGATTCGGCACGAGGGCGACTACTACCGAACACGTCGTCATCCAGTGGTTCTGGCGGGCGGTGCTGTCCTTCTCGAACGAGATGCGCGCCCGACTGCTGCAGTTCGTGACCGGCACGTCCCGCGTCCGATGAACGGCTTCAAGGAGCTGTACGGCTCGAACGGCCCGCAAATGTTCACGATCGAGAAGTGGGGCACGCCGGAAAACTACCCCCGGGCACACACGTGCTTCAATCGATTAGACTTGCCACCGTACGAAAGCTACCAGCAGCTGAAGGATCGTCTCATTCAGGCCGTCGAGGGCAGTCAGGGTTTCGCCGGCGTCGATTAGATATGTTTGCGATACTCACGGGTG]

[+] EMBL BX468525             [AGGCAGATTCGGCACGAGGGCGACTACTACCGAACACGTCGTCATCCAGTGGTTCTGGCGGGCGGTGCTGTCCTTCTCGAACGAGATGCGCGCCCGACTGCTGCAGTTCGTGACCGGCACGTCCCGCGTCCGATGAACGGCTTCAAGGAGCTGTACGGCTCGAACGGCCCGCAAATGTTCACGATCGAGAAGTGGGGCACGCCGGAAAACTACCCCCGGGCACACACGTGCTTCAATCGATTAGACTTGCCACCGTACGAAAGCTACCAGCAGCTGAAGGATCGTCTCATTCAGGCCGTCGAGGGCAGTCAGGGTTTCGCCGGCGTCGATTAGATATGTTTGCGATACTCACGGGTG]


>consensus_8168#6 AGGCAGATTCGGCACGAGGGCGACTACTACCGAACACGTCGTCATCCAGTGGTTCTGGCG GGCGGTGCTGTCCTTCTCGAACGAGATGCGCGCCCGACTGCTGCAGTTCGTGACCGGCAC GTCCCGCGTCCGATGAACGGCTTCAAGGAGCTGTACGGCTCGAACGGCCCGCAAATGTTC ACGATCGAGAAGTGGGGCACGCCGGAAAACTACCCCCGGGCACACACGTGCTTCAATCGA TTAGACTTGCCACCGTACGAAAGCTACCAGCAGCTGAAGGATCGTCTCATTCAGGCCGTC GAGGGCAGTCAGGGTTTCGCCGGCGTCGATTAGATATGTTTGCGATACTCACGGGTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8168#0      GAACGGGGCCGCCATCGACGTGACGAACGAGAACAAGGACGAGTACATCCGGCTGGTCAT 60
consensus_8168#6      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
consensus_8168#4      ------------------------------------------------------------
consensus_8168#5      ------------------------------------------------------------
consensus_8168#2      ------------------------------------------------------------
consensus_8168#3      ------------------------------------------------------------
                                                                                  

consensus_8168#0      CCAGTGGCGGTTCGTGTCGCGCGTCCAGGTGCAGATGCAAGCGTTCCTGGACGGGTTCGG 120
consensus_8168#6      ------------------------------------------------------------
consensus_8168#1      --------CCGCGCAGTGGGACGATCCGCGGCTGTCCAATCCAAAGATCGCTGGTCAGGC 52
consensus_8168#4      ------------------------------------------------------------
consensus_8168#5      ------------------------------------------------------------
consensus_8168#2      ------------------------------------------------------------
consensus_8168#3      --------------------------------------------TACCAAGGTACGCTAA 16
                                                                                  

consensus_8168#0      TTCGCTGGTGCCGCTCAACCTGCTCAAGATCTTCGACGAGCACGAGCTGGAGCTGCTGAT 180
consensus_8168#6      ------------------------------------------------------------
consensus_8168#1      GGTACCGTACTCGCGCGACTACAAGCAGAAGTACGAGTACTTCAAGAGCCAGCTGCAGAA 112
consensus_8168#4      ------------------------------------------------CCGCCCACGCGT 12
consensus_8168#5      -----------------------------------------------GCCTCAGGCAGAA 13
consensus_8168#2      ------------------------------------------------------------
consensus_8168#3      ATCGTTGCTATTTTTAACTAACGAAGCAAAGCTAAAAGGATGTACTATATTTAAACGAAA 76
                                                                                  

consensus_8168#0      GTGCGGCATCCAGAACATTGACCTGCGGGACTGGAAG-CGCAACACGCTGTACAAGGGCG 239
consensus_8168#6      ------------------------------------A-GGCAG-ATTCGGCACGAGGGCG 22
consensus_8168#1      ACCGAGCAACGTGCCAAATAAGATCGACATCAAGGTGCGGCGGGCGTCCATACTGGAG-G 171
consensus_8168#4      CCGGAGCAACGTGCCAAATAAGATCGACATCAAGGTGCGGCGGGCGTCCATACTGGAG-G 71
consensus_8168#5      TCGCCACGAGGTGTNANGACACGGAGTTACTACAAACTCGCTGC--TCTACATCAAGG-G 70
consensus_8168#2      ------------------------------------------------------------
consensus_8168#3      CCACTCAATACCCCATTGTAGCGTGGAAAAGAGAGAGAACATGGAGCAGGCTGGAAAACA 136
                                                                                  

consensus_8168#0      ACTACTACCCGAACCACGTCGTCATCCAGTGGTTCTGGCGGGCGGTG-CTGTCCTTCTCG 298
consensus_8168#6      ACTACTACC--GAACACGTCGTCATCCAGTGGTTCTGGCGGGCGGTG-CTGTCCTTCTCG 79
consensus_8168#1      ATTCGTATCGCGTCATCAACTCGGTCACGCGGCTCGACCTGCTCAAG-ACGAAGCTGTGG 230
consensus_8168#4      ATTCCTATCGCGTCATCAGCTCGGTCACGCTGCTCAACCTGCTCAAG-ACGAAGCTGTGG 130
consensus_8168#5      AGAACGATCCGAGCACGCTGATGCTTACG---TTCAGCGTGGACGAG-G-AAAGCTTCGG 125
consensus_8168#2      ------------------------------------------CCGTATATGCGTGTGTGG 18
consensus_8168#3      ACAAGGAAAAACAAAAAAAAAACAAATGGCTGTTATATATATATATATATGCGTGTGTGG 196
                                                                             *   *

consensus_8168#0      AACGAGATGCGCGCCCGA-CTGCTGCAGTTCGTGACCGGCACGTCCCGCGTCCCGATGAA 357
consensus_8168#6      AACGAGATGCGCGCCCGA-CTGCTGCAGTTCGTGACCGGCACGTCCCGCGTCC-GATGAA 137
consensus_8168#1      GTCGA-GTTCGAGGGCGAGACGGGGCTGGATTATGGGGGGCTGGCGCGCGAGTGGTTCTA 289
consensus_8168#4      GTCGA-GTTCGAGGGCGAGACGGGGCTGGATTATGGGGGGCTGGCGCGCGAGTGGTTCTA 189
consensus_8168#5      CACGACGAACCAGCGCGAGCTGAAACCGAACGGGGCCGATCTGGAG-GTGAGCAACGAGA 184
consensus_8168#2      GGCCGATTCCCGTAAAAAGGATTTGCGGAGTGTTGCAAACCGGATAGGGGTTTTTTTTTT 78
consensus_8168#3      GGCCGATTCCCGTAAAAAGGATTTGCGGAGTGTTGCAAACCGGATAGGGGTTTTTTTTT- 255
                        *      *       *       * *              *    * *          

consensus_8168#0      CGGC---TTCAAGGAGCTGTACGGCTCGA---ACGGCCCGCAAA-TGTTCACGATCGAGA 410
consensus_8168#6      CGGC---TTCAAGGAGCTGTACGGCTCGA---ACGGCCCGCAAA-TGTTCACGATCGAGA 190
consensus_8168#1      CCTGCTGTCGAAGGAGATGTTCAACCCGTACTACGGCCTGTTTG-AGTACTCGGCGATGG 348
consensus_8168#4      CCTGCTGTCGAAGGAGATGTTCAACCCGTACTACGGCCTGTTTG-AGTACTCGGAGATGG 248
consensus_8168#5      AC--------AAGGACGAGTACATCCGGCGTCGTGATCGACTGGCGGTTCGAGGCGCGCG 236
consensus_8168#2      CGTG----TGGGGGTGAAGAGTTGTGCAAAGAGTTGTCTGTTTTTGGCTCAGCTCTTATC 134
consensus_8168#3      CGTG----TGGGGGTGAAGAGTTGTGCAAAGAGTTGTCTGTTTTTGGCTCAGCTCTTATC 311
                                  **    *                  *        *  *          

consensus_8168#0      AGTGGGGCACGCCGGAAAACTACCCC--CGGGCACACACGTGCTTCAATCGATTAGACTT 468
consensus_8168#6      AGTGGGGCACGCCGGAAAACTACCCC--CGGGCACACACGTGCTTCAATCGATTAGACTT 248
consensus_8168#1      ACAACTACACACTGCAGATCAACCCCAACAGTGGGCTGTGCAATGAGGAGCATTTGAACT 408
consensus_8168#4      ACAACTACACACTGCAGATCAACCCCAACAGTGGGCTGTGCAATGAGGAGCATTTGAACT 308
consensus_8168#5      TCAAGGACCAGATGCAAG-CGTTCCTGGAGGGCGTCAGCTCGCTGGTGCCCGCTNCATTT 295
consensus_8168#2      TCTCTTGCATCCCCCACTCCCCCTCCTGCCGCCGTCGCCGTTGTATTTTTCATCCTAATC 194
consensus_8168#3      TCTCTTGCATCCCCCACTCCCCCTCCTGCCGCCGTCGCCGTTGTATTTTTCATCCTAATC 371
                             *       *   *    *     *            *            *   

consensus_8168#0      GCCACCG---TACGAAAGCTACCAGCAGCTGAAGGATCGTCTCATTCAGGCC--GTCGAG 523
consensus_8168#6      GCCACCG---TACGAAAGCTACCAGCAGCTGAAGGATCGTCTCATTCAGGCC--GTCGAG 303
consensus_8168#1      ACTTCCGGTTTATCGGGCGCATTGCGGGCATGGCAATCTACCACGGTAAGCT--GCTGGA 466
consensus_8168#4      ACTTCCGGTTTATCGGGCGCATTGCGGGCATGGCAATCTACCACGGTAAGCT--GCTGGA 366
consensus_8168#5      GCTCAAGGATTTTCGACGAGA--ACGAGCTGGACG--CTGCC-TGATGTGCG--GCCATC 348
consensus_8168#2      CAATCCAAACGTTTCTGTGTACTAT-GTTTGCTCGTTGTTACTTAATTCGTT--GTT--- 248
consensus_8168#3      CAATCCAAACGTTTCTGTGTACTAT-GTTTGCTCGAACATGTGTGGTTAGTTAGGTTAGG 430
                                          *                            *    *     

consensus_8168#0      GGCAGTCAGGGTTTCGCCGGCGTCGATTAGATATGTTTGCGATACTCA------CGGTGT 577
consensus_8168#6      GGCAGTCAGGGTTTCGCCGGCGTCGATTAGATATGTTTGCGATACTCA------CGG-GT 356
consensus_8168#1      TGCGTTCTTCATCCGACCGTTCTACAA--GATGATGCTGCAGAAGTCGATCGACCTGAAG 524
consensus_8168#4      TGCGTTCTTCATCCGACCGATCTACAA--GATGATGCTGCAGAAGTCGATCGACCTGAAG 424
consensus_8168#5      CAGAGCATCGACGTGAACGACGTGGGAAGGAAGAAACACCGATAGTTA--CAAACGGGCG 406
consensus_8168#2      CGTGGC-----TGTTTGGGCCACAGGC-GTAGCGTGTGATGCTTGTTATATCCCTGCAAG 302
consensus_8168#3      CGTAATAGAAATAGCTAGGCTCTAGGG-ATAGGAGAAGACGGGTGCGGCAGGCCAACACA 489
                                        *           *                             

consensus_8168#0      GTGTCTGTGTTTTGGTGTGGTCGCTTACTGCAACACAGAGAGAGAGAGAGAGAGAGAGAG 637
consensus_8168#6      G----------------------------------------------------------- 357
consensus_8168#1      GACATGGGAGGCGGTCGACACGGAGTACTACAACTCGCTGCTCTACATCAAGGAGAACGA 584
consensus_8168#4      GACATGG-AGGCGGACGACACGGAGTACTACAACTCGCTGCTCTACATCAAGGAGAACGA 483
consensus_8168#5      GAC-TACTTAGCGGCGAAACCATAGCGGNTGGGTGCAA-GATTGGTTCCTGGGCAGACG- 463
consensus_8168#2      GCTACAAAGGCTAGGTGAG--AAACTTAA-CAACAAGAGAAAAAAAGGAGAGAAGACATA 359
consensus_8168#3      GCAACACAGGCCCGGTGAGCGAAACTTAAACAACGTGATATTTGATACC-AGCTGCCAAA 548
                      *                                                           

consensus_8168#0      AGAGAGAGAGAGAGAGAAGACACAGAACATACACACGCCCCGTCCACACACAGTATGCCA 697
consensus_8168#6      ------------------------------------------------------------
consensus_8168#1      TCCGAGCACGCTGATGCTCACGTTCAGCGTGGACGAGGAAAGCTTCGGCACGACGAACCA 644
consensus_8168#4      TCCCAGCACGCTGATGCTTACGTTCAGCGTGGACGAGGAAAGTTTCGGCACGACGAACCA 543
consensus_8168#5      -CCCGGTTTCGTAGTCCTTTCAACCAACTGNAAAACTTGCCGCNTCCCCA-GGGGNATTG 521
consensus_8168#2      AACAAAACAGAATATTTATATACGATAATCCATCCCTCGTGCTTTA-CCATTGCGAGCTG 418
consensus_8168#3      AAAAGGAAGGAAAACAAGGATAAAGAAACATAATCGAAGGGTAGAAACTCTTGTGCGCGA 608
                                                                                  

consensus_8168#0      TCACACGTTCAATAAGAAGAAACGAAACAACAATACGGTTAGAGAAATTTCTTAGCTTCG 757
consensus_8168#6      ------------------------------------------------------------
consensus_8168#1      GCGCGAGCTGAAACCGAACGGGGCCGATCTGGAGGTGAGCAACGAGAACAAGGACGAGTA 704
consensus_8168#4      GCGCGAGCTGAAACCAAAC----------------------------------------- 562
consensus_8168#5      CTTTGNCAGGAGATCTN------------------------------------------- 538
consensus_8168#2      CAGAAGAATAATGTTACAAGGCTATATTTATTGATTCCTCTGCCAGTGCGACTGTGTGGG 478
consensus_8168#3      TAACCAAACGGCA--ACAAA-CCGTGCAAA------------------------------ 635
                                                                                  

consensus_8168#0      CAAGCAACACATGGGCTCGCTCCCTTCTCCGAACCCCTCCCACTGTACGCCGTCAGCCGG 817
consensus_8168#6      ------------------------------------------------------------
consensus_8168#1      CATTCTGCTCGTGATCGACTGGCGGTTCGAGGCGCGCGTCAAGGACCAGATGCAAGCGTT 764
consensus_8168#4      ------------------------------------------------------------
consensus_8168#5      ------------------------------------------------------------
consensus_8168#2      GCCCGTGTTTGTGAAGGGCCGGAACAGGAGCGGCAAATAAAAACCAACAGATACTACACT 538
consensus_8168#3      ------------------------------------------------------------
                                                                                  

consensus_8168#0      GGCTGCGCGATCCCAGTCCGATAGATCGGCCAAGCCAAGCCAAGAAGATGCCGACGGTGG 877
consensus_8168#6      ------------------------------------------------------------
consensus_8168#1      CCTGGAGGGCGTCAGCTCGCTGGTGCCGCTGCATTTGCTCAAGATTTTCGACGAGAACGA 824
consensus_8168#4      ------------------------------------------------------------
consensus_8168#5      ------------------------------------------------------------
consensus_8168#2      AAAACGGGAAGGGGATTGTAATAAAGGCGGTTTGTTTTTACGAAGCGCGAACGAAATCAA 598
consensus_8168#3      ------------------------------------------------------------
                                                                                  

consensus_8168#0      GACGGCTCATGACAATCAAGTGTACACACGCTCGGGTCGGGGGTTTGCTCGAACATGTGT 937
consensus_8168#6      ------------------------------------------------------------
consensus_8168#1      GCTGGAGCTGCTGATGTGCGGCATCCAGAGCATCGACGTGAACGACTGGAAGAAGAACAC 884
consensus_8168#4      ------------------------------------------------------------
consensus_8168#5      ------------------------------------------------------------
consensus_8168#2      TTTGTTAGAGAAGAAGAGAAAGTGATGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 658
consensus_8168#3      ------------------------------------------------------------
                                                                                  

consensus_8168#0      GGGTAGTTAGGGTAGGCGTAATAGAAATAGCTAGGC 973
consensus_8168#6      ------------------------------------
consensus_8168#1      GA---------------------------------- 886
consensus_8168#4      ------------------------------------
consensus_8168#5      ------------------------------------
consensus_8168#2      ACCACGGAT--------------------------- 667
consensus_8168#3      ------------------------------------
                                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)