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Anopheles gambiae
cluster # 8194 cluster # 8194       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8194#0 length = 1397 sequences # 6  
consensus_8194#1 length = 595 sequences # 1  
consensus_8194#2 length = 535 sequences # 2  

consensusID : consensus_8194#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1397
fasta sequence
                              [TTGCCCGAGGTTAATATAACAAAAAACACACACCACCCCAGAATCTGCTTATTACGCCGGTACGAACAGTCAACCTAGAAAGGAAAAAAACTAGAAAGCGAGTGTGCAAATATAAGCCGGATAAACTACTAAAAACTCTTCTAACTGTTAAGCGCAAATTCGACCACTCCGTTTCTTTTGGTCGCACACAAGAAAGGAATGAGAAATGCTACAATAGAGAAAACCTATCCCA---GGTTAAGATACACAAAAAAGCTAACAT-AAAAAAACGATGAAAAATCAATGATAATGTATATCAATAGATGTGCATAATTCGGATAAAAAACACACACAAACACACGCTCACACCTTTACTCGATTGTAAAATAGACTATTAAACTACAATGTAACAGACAGATGGCGAAACAATTGAAAGCGCAACTGAGAAGACTATAGGGAAGAAACAGCTAT---AGCAGCAGCAGTGCGCTTTACAAACCCAATTGGTGTGTAGCATCGAGTATGAAAGTAAAAGCGATCCAATGGAGGAGAAGGATACGTTGTGTAGGGCTTTTCACATTGATTAGTGCTAGGAGTATACACATACACACACAAAACAGCAAACCAACGGTGCGGAAGTTCAGTAAAAGATCCAACTATTTGTGTAGTGTGCGAGCATAAATTGACGCGCTGCAGCTAAAACGAATGTGCGCGCGCGCGCCCTCTTCCCGTTTTCCCGAATCTTACTGCTTTTCGCGGGAGCTAGCGATGTTAGCGAAACATACTAACTAGTAGCGATAGCAATGGCAGGAAAGGACACTTTTTTCTACAGAGAAATGCAAAACCAATTTCTTAGATACACACACACATACAGACACGCACACATACATGCACGTGATATGGATTGATAGTTTTGTGTGGTGCAATATTTTACCTACTACATTCAAACACGACTTTCTCATTGTGTTGTGTTAAAAATTGAAAA-TTGGTTTGACCTTTAATATTACTTATTTCCATGGAAAATTCCTTAAATTGTAAAAAAAATAGT-CTCTGATACGTAACTATCAGCCGAAGATGGTTAAGTAAAATGCAATGAAGCTGAATATGTTAACAACACCATAATTATAAGGGGAACAAAAAAACACACAAAAACAGCAAATTTAAATAAGTGGTTCAATCATTATTTTCCGTTTGTCACTTTCATCGACTTGCTTGTTGCTACACGTGGTAAACGATGCGTTGCGTAACTGCGCAGCAACACTAGTAGCGCAAACTTAAGAATGTAGTACAGGATACAGGTTAGTAGGCGAAATGCAAAAACAAACCCATCAAACAGCCAGGATCCTTCTGTTAAATTGCATTCACTGTGTGTATGTGNGTGTGTGCGCGTCTATTTGTGTGGCTGTGTGTACGGGTTGTCTCGT]

[+] EMBL AL932762             [TTGCCCGAGGTTAATATAACAAAAAACACACACCACCCCAGAATCTGCTTATTACGCCGGTACGAACAGTCAACCTAGAAAGGAAAAAAACTAGAAAGCGAGTGTGCAAATATAAGCCGGATAAACTACTAAAAACTCTTCTAACTGTTAAGCGCAAATTCGACCACTCCGTTTCTTTTGGTCGCACACAAGAAAGGAATGAGAAATGCTACAATAGAGAAAACCTATCCCA   GGTTAAGATACACAAAAAAGCTAACAT AAAAAAACGATGAAAAATCAATGATAATGTATATCAATAGATGTGCATAATTCGGATAAAAAACACACACAAACACACGCTCACACCTTTACTCGATTGTAAAATAGACTATTAAACTACAATGTAACAGACAGATGGCGAAACAATTGAAAGCGCAACTGAGAAGACTATAGGGAAGAAACAGCTAT   AGCAGCAGCAGTGCGCTTTACAAACCCAATTGGTGTGTAGCATCGAGTATGAAAGTAAAAGCGATCCAATGGAGGAGAAGGATACGTTGTGTAGGGCTTTTCACATTGATTAGTGCTAGGAGTATACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM592696             [                                                                                                                                                                                 ccGGTCGCACACAAGAAAGGAATGAGAAATGCTAAAATAGAGAAAACCTATCCCAGGGGGTTAAGATACACAAAAAAGCTAACATAAAAAAAACGATGAAAAATCAATGATAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX628862             [                                                                                                                                                                                                                                                                                                                                                                                                                                           AGACTATAGGGAAGAAACAGCTATAGCAGCAGCAGCAGTGCGCTTTACAAACCCAATTGGTGTGTAGCATCGAGTATGAAAGTAAAAGCGATCCAATGGAGGAGAAGGATACGTTGTGTAGGGCTTTTCACATTGATTAGTGCTAGGAGTATACACATACACACACAAAACAGCAAACCAACGGTGCGGAAGTTCAGTAAAAGATCCAACTATTTGTGTAGTGTGCGAGCATAAATTGACGCGCTGCAGCTAAAACGAATGTGCGCGCGCGCGCCCTCTTCCCGTTTTCCCGAATCTTACTGCTTTTCGCGGGAGCTAGCGATGTTAGCGAAACATACTAACTAGTAGCGATAGCAATGGCAGGAAAGGACACTTTTTTCTACAGAGAAATGCAAAACCAATTTCTTAGATACACACACACATACAGACACGCACACATACATGCACGTGATATGGATTGATAGTTTTGTGTGGTGCAATATTTTACCTACTACATTCAAACACGACTTTCTCATTGTGTTGTGTTAAAAATTGAAAA TTGGTTTGACCTTTAATATTACTTATTTCCATGGAAAATTCCTTAAATTGTAAAAAAAATAGT CTCTGATACGTAACTATCAGCCGAAGATGGTTAAGTAAAATGCAATGAAGCTGAATATGTTAACAACACCATAATT                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX619265             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTCAGTAAAAGATCCAACTATTTGTGTAGTGTGCGAGCATAAATTGACGCGCTGCAGCTAAAACGAATGTGCGCGCGCGCGCCCTCTTCCCGTTTTCCCGAATCTTACTGCTTTTCGCGGGAGCTAGCGATGTTAGCGAAACATACTAACTAGTAGCGATAGCAATGGCAGGAAAGGACACTTTTTTCTACAGAGAAATGCAAAACCAATTTCTTAGATACACACACACATACAGACACGCACACATACATGCACGTGATATGGATTGATAGTTTTGTGTGGTGCAATATTTTACCTACTACATTCAAACACGACTTTCTCATTGTGTTGTGTTAAAAATTGAAAA TTGGTTTGACCTTTAATATTACTTATTTCCATGGAAAATTCCTTAAATNGTAAAAAAAATAGT CTCTGATACGTAACTATCAGCCGAAGATGGTTAAGTAAAATGCAATGAAGCTGAATATGTTAACAACACCATAATTATAANNGGAAC AAAAAACACACAAA                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX629288             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATTTGTGTAGTGTGCGAGCATAAATTGACGCGCTGCAGCTAAAACGAATGT  GCGCGCGCGCCCTCTTCCCGTTTTCCCGAATCTTACTGCTTTTCGCGGGAGCTAGCGATGTTAGCGAAACATACTAACTAGTAGCGATAGCAATGGCAGGAAAGGACACTTTTTTCTACGGAGAAATGCAAACCCAATTTCTTAGATACACACACACATACAGACACGCACACATACATGCACGTGATATGGATTGATAGTTTTGTGTGGTGCAATATTTTACCTACTACATTCAAACACGACTTTCGCATTGTGTTGTGTTAAAAATTGAAAAGTTGGTTTGACTTTTAATATTACTTATTTCCATGGAAAATTCCTTAAATTGT GAAAAAATCGTAGTCTGATACGTAAATATCAGCAGGAGATGGTTAAGTAAAATGCAATGAAGCTGAATATACTAACAACACCATAATTATAAGGGGAACAAAAAAACACACAAAAACAGCAAATTTAAATAAGTGGTTCAATCATTATTTTCCGTTTGTCACTTTCATCGACTTGCTTGTTGCTACACGTGGTAAACGATGCGTTGCGTAACTGCGCAGCAACACTAGTAGCGCAAACTTAAGAATGTAGTACAGGATACAGGTTAGTAGGCGAAATGCAAAAACAAACCCATCAAACAGCCAGGATCCTTCTGTTAAATTGCATTCACTGTGTGTATGTGNGTGTGTGCGCGTCTATTTGTGTGGCTGTGTGTACGGGTTGTCTCGT]
[+] EMBL BX629181             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATTTGTGTAGTGTGCGAGCATAAATTGACGCGCTGCAGCTAAAACGAATGT  GCGCGCGCGCCCTCTTCCCGTTTTCCCGAATCTTACTGCTTTTCGCGGGAGCTAGCGATGTTAGCGAAACATACTAACTAGTAGCGATAGCAATGGCAGGAAAGGACACTTTTTTCTACGGAGAAATGCAAACCCAATTTCTTAGATACACACACACATACAGACACGCACACATACATGCACGTGATATGGATTGATAGTTTTGTGTGGTGCAATATTTTACCTACTACATTCAAACACGACTTTCGCATTGTGTTGTGTTAAAAATTGAAAAGTTGGTTTGACTTTTAATATTACTTATTTCCATGGAAAATTCCTTAAATTGT GAAAAAATCGTAGTCTGATACGTAAATATCAGCAGGAGATGGTTAAGTAAAATGCAATGAAGCTGAATATACTAACAACACCATAATTATAAGGGGAACAAAAAAACACACAAAAACAGCAAATTTAAATAAGTGGTTCAATCATTATTTTCCGTTTGTCACTTTCATCGACTTGCTTGTTGCTACACGTGGTAAACGATGCGTTGCGTAACTGCGCAGCAACACTAGTAGCGCAAACTTAAGAATGTAGTACAGGATACAGGTTAGTAGGCGAAATGCAAAAACAAACCCATCAAACAGCCAGGATCCTTCTGTTAAATTGCATTCACTGTGTGTATGTGNGTGTGTGCGCGTCTATTTGTGTGGCTGTGTGTACG           ]


>consensus_8194#0 TTGCCCGAGGTTAATATAACAAAAAACACACACCACCCCAGAATCTGCTTATTACGCCGG TACGAACAGTCAACCTAGAAAGGAAAAAAACTAGAAAGCGAGTGTGCAAATATAAGCCGG ATAAACTACTAAAAACTCTTCTAACTGTTAAGCGCAAATTCGACCACTCCGTTTCTTTTG GTCGCACACAAGAAAGGAATGAGAAATGCTACAATAGAGAAAACCTATCCCAGGTTAAGA TACACAAAAAAGCTAACATAAAAAAACGATGAAAAATCAATGATAATGTATATCAATAGA TGTGCATAATTCGGATAAAAAACACACACAAACACACGCTCACACCTTTACTCGATTGTA AAATAGACTATTAAACTACAATGTAACAGACAGATGGCGAAACAATTGAAAGCGCAACTG AGAAGACTATAGGGAAGAAACAGCTATAGCAGCAGCAGTGCGCTTTACAAACCCAATTGG TGTGTAGCATCGAGTATGAAAGTAAAAGCGATCCAATGGAGGAGAAGGATACGTTGTGTA GGGCTTTTCACATTGATTAGTGCTAGGAGTATACACATACACACACAAAACAGCAAACCA ACGGTGCGGAAGTTCAGTAAAAGATCCAACTATTTGTGTAGTGTGCGAGCATAAATTGAC GCGCTGCAGCTAAAACGAATGTGCGCGCGCGCGCCCTCTTCCCGTTTTCCCGAATCTTAC TGCTTTTCGCGGGAGCTAGCGATGTTAGCGAAACATACTAACTAGTAGCGATAGCAATGG CAGGAAAGGACACTTTTTTCTACAGAGAAATGCAAAACCAATTTCTTAGATACACACACA CATACAGACACGCACACATACATGCACGTGATATGGATTGATAGTTTTGTGTGGTGCAAT ATTTTACCTACTACATTCAAACACGACTTTCTCATTGTGTTGTGTTAAAAATTGAAAATT GGTTTGACCTTTAATATTACTTATTTCCATGGAAAATTCCTTAAATTGTAAAAAAAATAG TCTCTGATACGTAACTATCAGCCGAAGATGGTTAAGTAAAATGCAATGAAGCTGAATATG TTAACAACACCATAATTATAAGGGGAACAAAAAAACACACAAAAACAGCAAATTTAAATA AGTGGTTCAATCATTATTTTCCGTTTGTCACTTTCATCGACTTGCTTGTTGCTACACGTG GTAAACGATGCGTTGCGTAACTGCGCAGCAACACTAGTAGCGCAAACTTAAGAATGTAGT ACAGGATACAGGTTAGTAGGCGAAATGCAAAAACAAACCCATCAAACAGCCAGGATCCTT CTGTTAAATTGCATTCACTGTGTGTATGTGNGTGTGTGCGCGTCTATTTGTGTGGCTGTG TGTACGGGTTGTCTCGT



consensusID : consensus_8194#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 595
fasta sequence
                              [CCGGGTTAAAAAAAATGCAATGAAGCTGAATATACTAACAACACCATCATTATAAGGGGAACAAAAAAACACACAAAAACAGCAAATTTAAATAAGTGGTTCAATCATTATTTTCCGTTAATCACTTTCTTCGACTTGCTTGCTACACGTGGTTAACGATGCGTTGCGTAACTGCGCAGCAACACTAGTGGCGCAAACTTAAGAATGTAGTACAGGATACGGTTAGTAGGCGAAGTACAAAAACAAACCCATTAAACAGCCAGGTTCCTTCTGTTAAAATGCATTCACTGTGTGTATGTGTGTGAGTGTGTGTGCGTGTCTATTTGTGTGGCTGTGTGTACGGTTTGTCTCGTAACATTGTACGATCGGTGTTACATTTAAGTTCATGGGACAATAAGTGCACATTTCCTTTCAGAATCGGGGGCGGCAGTGTGAGTTTAGTTTTCAAAACGATTCTTTCTTTTTGTGTAGCATTTAGTTATCAACAATATTATGCGTTTGTGTTTACTCTTGACAACACTTCTTACTTTTTAAGAGGCAGGGGCAGGACTTGGCAGTAGAGTGCGCTATGCATGAATGTGGAAACAAGGGATGA]

[+] EMBL BM622465             [CCGGGTTAAAAAAAATGCAATGAAGCTGAATATACTAACAACACCATCATTATAAGGGGAACAAAAAAACACACAAAAACAGCAAATTTAAATAAGTGGTTCAATCATTATTTTCCGTTAATCACTTTCTTCGACTTGCTTGCTACACGTGGTTAACGATGCGTTGCGTAACTGCGCAGCAACACTAGTGGCGCAAACTTAAGAATGTAGTACAGGATACGGTTAGTAGGCGAAGTACAAAAACAAACCCATTAAACAGCCAGGTTCCTTCTGTTAAAATGCATTCACTGTGTGTATGTGTGTGAGTGTGTGTGCGTGTCTATTTGTGTGGCTGTGTGTACGGTTTGTCTCGTAACATTGTACGATCGGTGTTACATTTAAGTTCATGGGACAATAAGTGCACATTTCCTTTCAGAATCGGGGGCGGCAGTGTGAGTTTAGTTTTCAAAACGATTCTTTCTTTTTGTGTAGCATTTAGTTATCAACAATATTATGCGTTTGTGTTTACTCTTGACAACACTTCTTACTTTTTAAGAGGCAGGGGCAGGACTTGGCAGTAGAGTGCGCTATGCATGAATGTGGAAACAAGGGATGA]


>consensus_8194#1 CCGGGTTAAAAAAAATGCAATGAAGCTGAATATACTAACAACACCATCATTATAAGGGGA ACAAAAAAACACACAAAAACAGCAAATTTAAATAAGTGGTTCAATCATTATTTTCCGTTA ATCACTTTCTTCGACTTGCTTGCTACACGTGGTTAACGATGCGTTGCGTAACTGCGCAGC AACACTAGTGGCGCAAACTTAAGAATGTAGTACAGGATACGGTTAGTAGGCGAAGTACAA AAACAAACCCATTAAACAGCCAGGTTCCTTCTGTTAAAATGCATTCACTGTGTGTATGTG TGTGAGTGTGTGTGCGTGTCTATTTGTGTGGCTGTGTGTACGGTTTGTCTCGTAACATTG TACGATCGGTGTTACATTTAAGTTCATGGGACAATAAGTGCACATTTCCTTTCAGAATCG GGGGCGGCAGTGTGAGTTTAGTTTTCAAAACGATTCTTTCTTTTTGTGTAGCATTTAGTT ATCAACAATATTATGCGTTTGTGTTTACTCTTGACAACACTTCTTACTTTTTAAGAGGCA GGGGCAGGACTTGGCAGTAGAGTGCGCTATGCATGAATGTGGAAACAAGGGATGA



consensusID : consensus_8194#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 535
fasta sequence
                              [CAGAATCGCCACGAGGTNTATTTTCTACAGAGAAATGCAAAACCAATTTCTTAGATACACACACACATACAGACACGCACACATACATGCACGTGATATGGATTGATAGTTTTGTGTGGTGCAATATTTTACCTACTACATTCAAACACGACTTTCTCATTGTGTTGTGTTAAAAATTGAAAATTGGTTTGACCTTTAATATTACTTATTTCCATGGAAAATTCCTTAAATTGTAAAAAAAATAGTCTCTGATACGTAACTATCAGCCGAAGATGGTTAAGTAAAATGCAATGAAGCTGAATATGTTAACAACACCATAATTATAAGGGGAACAAAAAACACACAAAAACAGCAAATTTCAACATAAGTGGTTTCAATCATTATGTTGTCCCGTGTTGTCACGTTTTCATCGGACTTTGCTTTGGCTAACACGTGGGTTAAACCGATGGCGGTTGCGTAAACCTNGCGCCAGGCAAACCAACCTAGTTGGGCGCAAAACTTTCACGCACATCGTTGTTCACACAGGGAATNACCG]

[+] EMBL BX469071             [CAGAATCGCCACGAGGTNTATTTTCTACAGAGAAATGCAAAACCAATTTCTTAGATACACACACACATACAGACACGCACACATACATGCACGTGATATGGATTGATAGTTTTGTGTGGTGCAATATTTTACCTACTACATTCAAACACGACTTTCTCATTGTGTTGTGTTAAAAATTGAAAATTGGTTTGACCTTTAATATTACTTATTTCCATGGAAAATTCCTTAAATTGTAAAAAAAATAGTCTCTGATACGTAACTATCAGCCGAAGATGGTTAAGTAAAATGCAATGAAGCTGAATATGTTAACAACACCATAATTATAAGGGGAACAAAAAACACACAAAAACAGCAAATTTCAACATAAGTGGTTTCAATCATTATGTTGTCCCGTGTTGTCACGTTTTCATCGGACTTTGCTTTGGCTAACACGTGGGTTAAACCGATGGCGGTTGCGTAAACCTNGCGCCAGGCAAACCAACCTAGTTGGGCGCAAAACTTTCACGCACATCGTTGTTCACACAGGGAATNACCG]
[+] EMBL AGAA13347            [                                                 cgcgtccgCACACACACATACAGACACGCACACATACATGCACGTGATATGGATTGATAGTTTTGTGTGGTGCAATATTTTACCTACTACATTCAAACACGACTTTCTCATTGTGTTGTGTTAAAAATTGAAAATTGGTTTGACCTTTAATATTACTTATTTCCATGGAAAATTCCTTAAATTGTAAAAAAAATAGTCTCTGATACGTAACTATCAGCCGAAGATGGTTAAGTAAAATGCAATGAAGCTGAATATGTTAACAACACCATAATTAT                                                                                                                                                                                                                   ]


>consensus_8194#2 CAGAATCGCCACGAGGTNTATTTTCTACAGAGAAATGCAAAACCAATTTCTTAGATACAC ACACACATACAGACACGCACACATACATGCACGTGATATGGATTGATAGTTTTGTGTGGT GCAATATTTTACCTACTACATTCAAACACGACTTTCTCATTGTGTTGTGTTAAAAATTGA AAATTGGTTTGACCTTTAATATTACTTATTTCCATGGAAAATTCCTTAAATTGTAAAAAA AATAGTCTCTGATACGTAACTATCAGCCGAAGATGGTTAAGTAAAATGCAATGAAGCTGA ATATGTTAACAACACCATAATTATAAGGGGAACAAAAAACACACAAAAACAGCAAATTTC AACATAAGTGGTTTCAATCATTATGTTGTCCCGTGTTGTCACGTTTTCATCGGACTTTGC TTTGGCTAACACGTGGGTTAAACCGATGGCGGTTGCGTAAACCTNGCGCCAGGCAAACCA ACCTAGTTGGGCGCAAAACTTTCACGCACATCGTTGTTCACACAGGGAATNACCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8194#0      TTGCCCGAGGTTAATATAACAAAAAACACACACCACCCCAGAATCTGCTTATTACGCCGG 60
consensus_8194#2      ------------------------------------------------------------
consensus_8194#1      ------------------------------------------------------------
                                                                                  

consensus_8194#0      TACGAACAGTCAACCTAGAAAGGAAAAAAACTAGAAAGCGAGTGTGCAAATATAAGCCGG 120
consensus_8194#2      ------------------------------------------------------------
consensus_8194#1      ------------------------------------------------------------
                                                                                  

consensus_8194#0      ATAAACTACTAAAAACTCTTCTAACTGTTAAGCGCAAATTCGACCACTCCGTTTCTTTTG 180
consensus_8194#2      ------------------------------------------------------------
consensus_8194#1      ------------------------------------------------------------
                                                                                  

consensus_8194#0      GTCGCACACAAGAAAGGAATGAGAAATGCTACAATAGAGAAAACCTATCCCAGGTTAAGA 240
consensus_8194#2      ------------------------------------------------------------
consensus_8194#1      ------------------------------------------------------------
                                                                                  

consensus_8194#0      TACACAAAAAAGCTAACATAAAAAAACGATGAAAAATCAATGATAATGTATATCAATAGA 300
consensus_8194#2      ------------------------------------------------------------
consensus_8194#1      ------------------------------------------------------------
                                                                                  

consensus_8194#0      TGTGCATAATTCGGATAAAAAACACACACAAACACACGCTCACACCTTTACTCGATTGTA 360
consensus_8194#2      ------------------------------------------------------------
consensus_8194#1      ------------------------------------------------------------
                                                                                  

consensus_8194#0      AAATAGACTATTAAACTACAATGTAACAGACAGATGGCGAAACAATTGAAAGCGCAACTG 420
consensus_8194#2      ------------------------------------------------------------
consensus_8194#1      ------------------------------------------------------------
                                                                                  

consensus_8194#0      AGAAGACTATAGGGAAGAAACAGCTATAGCAGCAGCAGTGCGCTTTACAAACCCAATTGG 480
consensus_8194#2      ------------------------------------------------------------
consensus_8194#1      ------------------------------------------------------------
                                                                                  

consensus_8194#0      TGTGTAGCATCGAGTATGAAAGTAAAAGCGATCCAATGGAGGAGAAGGATACGTTGTGTA 540
consensus_8194#2      ------------------------------------------------------------
consensus_8194#1      ------------------------------------------------------------
                                                                                  

consensus_8194#0      GGGCTTTTCACATTGATTAGTGCTAGGAGTATACACATACACACACAAAACAGCAAACCA 600
consensus_8194#2      ------------------------------------------------------------
consensus_8194#1      ------------------------------------------------------------
                                                                                  

consensus_8194#0      ACGGTGCGGAAGTTCAGTAAAAGATCCAACTATTTGTGTAGTGTGCGAGCATAAATTGAC 660
consensus_8194#2      ------------------------------------------------------------
consensus_8194#1      ------------------------------------------------------------
                                                                                  

consensus_8194#0      GCGCTGCAGCTAAAACGAATGTGCGCGCGCGCGCCCTCTTCCCGTTTTCCCGAATCTTAC 720
consensus_8194#2      ------------------------------------------------------------
consensus_8194#1      ------------------------------------------------------------
                                                                                  

consensus_8194#0      TGCTTTTCGCGGGAGCTAGCGATGTTAGCGAAACATACTAACTAGTAGCGATAGCAATGG 780
consensus_8194#2      ---------------------------------------------------CAGAATCGC 9
consensus_8194#1      ----------CCGGGTTAAAAAAAATGCAATGAAGCTGAATATACTAACAACACCATCAT 50
                                                                          *  *    

consensus_8194#0      CAGGAAAGGACACTTTTTTCTACAGAGAAAT-GCAAAACCAATTTCTTAGATACACACAC 839
consensus_8194#2      CACGAGGTN----TATTTTCTACAGAGAAAT-GCAAAACCAATTTCTTAGATACACACAC 64
consensus_8194#1      TATAAGGGGA-ACAAAAAAACACACAAAAACAGCAAATTTAAATAAGTGGTTCAATCATT 109
                       *  *                *** * ***  *****   ** *   * * *  *     

consensus_8194#0      ACATACAGACACGCACA--CATACATGCACGTGATATGGATTGATAGTTTTGTGTGGTGC 897
consensus_8194#2      ACATACAGACACGCACA--CATACATGCACGTGATATGGATTGATAGTTTTGTGTGGTGC 122
consensus_8194#1      ATTTTCCGTTAATCACTTTCTTCGACTTGCTTGCTACACGTGGTTAACGATGCGTTGCGT 169
                      *  * * *  *  ***   * *  *    * ** **    * * **    ** ** * * 

consensus_8194#0      AATATTTTACCTACTACATTCAAACACGACTTTCTCATTGTGTTGTGTTAAAAATTGAAA 957
consensus_8194#2      AATATTTTACCTACTACATTCAAACACGACTTTCTCATTGTGTTGTGTTAAAAATTGAAA 182
consensus_8194#1      AACTGCGCAGCAACACTAGTGGCGCA-AACTTA---AGAATGTAGTACAGGATACGGTTA 225
                      **      * * **   * *    **  ****    *   *** **     * *  *  *

consensus_8194#0      ATTGGTTTGACCTTTAATATTACTTATTTCCATGGAAAATTCCTTAAATTGTAAAAAAAA 1017
consensus_8194#2      ATTGGTTTGACCTTTAATATTACTTATTTCCATGGAAAATTCCTTAAATTGTAAAAAAAA 242
consensus_8194#1      GTAGGCGAAGTACAAAAACAAACCCATTAAACAGCCAGGTTCCTTCTGTTAAAATGCATT 285
                       * **          **    **  ***     *  *  ******   **  **   *  

consensus_8194#0      TAGTCTCTG---ATACGTAACTATCAGCCGAAGATGGTTAAGTAAAATGCAATGAAGCTG 1074
consensus_8194#2      TAGTCTCTG---ATACGTAACTATCAGCCGAAGATGGTTAAGTAAAATGCAATGAAGCTG 299
consensus_8194#1      CACTGTGTGTATGTGTGTGAGTGTGTGTGCGTGTCTATTTGTGTGGCTGTGTGTACGGTT 345
                       * * * **    *  ** * * *  *     *    **        **     * * * 

consensus_8194#0      AATATGTTAACA--ACACCATAATTATAAGG----GGAACAAAAAAACACACAAAAACAG 1128
consensus_8194#2      AATATGTTAACA--ACACCATAATTATAAGG----GGAACAAAAAA-CACACAAAAACAG 352
consensus_8194#1      TGTCTCGTAACATTGTACGATCGGTGTTACATTTAAGTTCATGGGACAATAAGTGCACAT 405
                        * *  *****    ** **   * * *       *  **    *  * *     *** 

consensus_8194#0      CAAATTTAAA--TAAGTGGTT-CAATCATTATTTTCCGTTTGTCACTTTCATCGACTTGC 1185
consensus_8194#2      CAAATTTCAACATAAGTGGTTTCAATCATTATGTT------GTCCCGTGTTGTCACGTTT 406
consensus_8194#1      TTCCTTTCAGAATCGGGGGCGGCAGTGTGAGTTTAGTTTTCAAAACGATTCTTTCTTTTT 465
                          *** *   *  * **   ** *     * *           *           *  

consensus_8194#0      TTGTTGCTACACGTGGTAAACGATGCGTTGCGTAACTGCGCAGCAACACTAGTAGCGCAA 1245
consensus_8194#2      TCATCGGACTTTGCTTTGGCTAACACGTGGGTTAA------ACCGATGGCGGTTGCGTAA 460
consensus_8194#1      GTGTAGCATTTAGTTATCAACAATATTATGCGTTTGTGTTTACTCTTGACAACACTTCTT 525
                         * *      *   *     *      *  *        *                  

consensus_8194#0      ACTTAAGAATGTAGTACAGGATACAGGTTAGTAGGCGAAATGCAAAAACAAACCCATCAA 1305
consensus_8194#2      ACCTN-GCGCCAGGCAAACCAACCTAGTTGG-GCGCAAAACTTTCACGCACATC-GTTGT 517
consensus_8194#1      ACTTT-TTAAGAGGCAGG--GGCAGGACTTGGCAGTAGAGTGCGC-TATGCATG-AATGT 580
                      ** *         * *            * *   *   *            *        

consensus_8194#0      ACAGCCAGGATCCTTCTGTTAAATTGCATTCACTGTGTGTATGTGNGTGTGTGCGCGTCT 1365
consensus_8194#2      TCACACAGGGAATNACCG------------------------------------------ 535
consensus_8194#1      GGAAACAAGGGATGA--------------------------------------------- 595
                        *  ** *                                                   

consensus_8194#0      ATTTGTGTGGCTGTGTGTACGGGTTGTCTCGT 1397
consensus_8194#2      --------------------------------
consensus_8194#1      --------------------------------
                                                      




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)