cluster # 8249

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8249 cluster # 8249 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8249#0 length = 2408 sequences # 7

consensus_8249#1 length = 469 sequences # 1
consensus_8249#2 length = 467 sequences # 1

consensusID : consensus_8249#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2408
fasta sequence

                              [GCGATTTACAGCACATCTATTGTACAACAGGCGGGCCCGAAAATGTTACGTACATTTGCGCTTACGGCAAGAATATTTGCGAAAACCTCGTTTCCCGCCTCGCTCGGTGGACGCCACCTGCAGCAACCGGCCTGCGGTGCCGCATTATGGAAACAGTACACGAATCTTCCCCACAGCAAAGAGCTACCGGAGCAGAAAGCCGATGGTAGCGAAACGGCCAAACCCAATAGCACCACCACACCCGGGTTCGATGCGGAGAAGCGTAGAAAAGTGCTCGAGCTATATGTTGACGGTGATGCGGCAGGAGGGTAAAAAGGTGCCCTCCGTGCCCACCATCAAGCCGGACCAGTGGGAGCATCTGTTAGGTTTATCGTCCCGAAACCAGCGCCGTCAGTACTACCTCTACCTGTGGAACATTGAAATGGTTCGATTGGGACAGAAGCTGAAAAAGGAGCGCAACAGGAAGAGATCGCCAAGCGGCGGGAAGAGCTAATGAAGACGACGGCGGCAAACGATCACATCGTGTACGGGCTGTTTCACAACACAATGTTCCTGCGGATATACGACTCGAAGATGGATCACTTTCACAACAACCGGCTCGTTCAAGCGATGCAGTTCGGGTGCAATCTGGTGATCGATTGCTCGTACGATGATTACATGAACGATAAGGAGATGCGCAACACGGCGAAGAGCCTGATGCTGTGTTTCGCGCTCAACCGGTCCCACGAGGAACCGTTCAACATTCATCACTGCAATGCAAACTATGGCAAGACGACGATGAAACAGCTCGAAAAGCATCTGGTGCAGATCCACCAGCCCGAGTTTCCGTTCAACGTTACCGATCGGAGTTATACGGAGCTTTTCCCCAAGGAGCGGCTGGTCTACCTGACGCCGCACTGCAAGAACGATCTGACCGAGTTTAACCCAGACGATGTGTACATAATCGGCGCCATGGTGGACAAATCCTCCCAGGAGGCCGTTTCGCTCGGCAAGGCCAAGAAGCTTGGTCTGCGGATGGCACGGCTCCCGCTGGATCGGTACTTTCA-GTTTA-AGAGCGGC-AA-ATC-GCTTACCCTCG-ATCAGATGGTAGCGATCATGCTGGAGCTGAAAA-CG-AG-CAACAACTTCGAGAAAGCGTTCCAGCACGTACCCCGCCGCAAGATAACGACGGTGGATGAGGCGGCAGCCAAAGAGCAGGAGATGCGAGAGGTGGCGAAATTT-AAATTTAACTTCAACAACAAACGGGCGGGCGATAAGCGAAACAATAGTAAACAAAGTTCCCATCCCAAGTTAGGGAAAGGTAGGTATTAAATGAGAGGCGTGAGTGAGAGGAAGCCATTGCGTGGCAGTTCTATATTGTAAGTTTAAAAGATAGTCCAACCCGTCGTTGTACGGTAGACGGGTACAGTCTCCCCAGTCACAAGCGAAGATAGATGATGGTCGTTGCCTTTTGGTGTGCTTAATTGCGACGCCTTCGGGTTCTGCTGATACGCCACGCGTTCGGTTCCTCGTACTTGTTGTACAGCGGTTCCAGCCGTTGGTTCTTTTTGAACTTGCTGAGCTTCGTGGGGTCCGAGAAGCGGAAGAAGGCCGGTGCAAACTCTACCAACCATTTCGGATCGATCGTGGTCACCTCGCGCATGTACTCCTTCGTCGTCTGGACGAGCTCGTGATAGACNACCCATTCCGGTTG-CCGGTTGAACAGTGC-ACTGGATGGATGAATGTAAACGACCTGCGAATCCACCAACGTTCGGTAGCCCTCCTGCGGGTCCTT-CTTGGCCGCATTGCGGAAGAACCCAGAGCAGATCGCTTTCTGCACGCGTACCGTATTCTTGCCCGCCGAAACCACGTCCAGCTTGTGTCGATCCATAATGCCCAGCAGCTGCTTGCGCACGTCCTGTGCCCGCTTCAGCGTACGAATCTGGACAAAGTTCTCGTAACACCAGGCGTTCGAGAACTTATTATTCTTCCAGCTATTGTAAACGGCCAGCAGCGTCAAATGGTCACCCTCGATTTGGTTAAACTTTGCCTTCTTCTGATCGGCCAGTGCTTGTTTGTCCTTTGGCCGGTAGAACACGTTCTGCACCGAAAGCATGGAAACGATCGTCAGCACTTCGTCGGAGCACTGGAGCGCTACGGACATGATCAGCAGCTTAGAAAGGTTCGGCTCGAGCGGAAACTCTGCCATCCTTCGGCCGAGCCGCGTGAGCAAACCTTCATTGTCGAGGGCTGATAGCGAGTGGAGCTGTTCCAGCGCCATCACCAGCGATTCCACCGGCGGCGCATCCATGAAATCAAAGTGCAGCAGATCGTTAATGCCCATCGTTTTCAGCTGCAGTACCGTGGTGGCTAGATTGGTTCGCTGATTTCCGGCACCGGGGTGGGCAACATTTCATCCCGTCGGGATTCTGCCT]

[+] EMBL CNS08R0M             [GCGATTTACAGCACATCTATTGTACAACAGGCGGGCCCGAAAATGTTACGTACATTTGCGCTTACGGCAAGAATATTTGCGAAAACCTCGTTTCCCGCCTCGCTCGGTGGACGCCACCTGCAGCAACCGGCCTGCGGTGCCGCATTATGGAAACAGTACACGAATCTTCCCCACAGCAAAGAGCTACCGGAGCAGAAAGCCGATGGTAGCGAAACGGCCAAACCCAATAGCACCACCACACCCGGGTTCGATGCGGAGAAGCGTAGAAAAGTGCTCGAGCTATATGTTGACGGTGATGCGGCAGGAGGGTAAAAAGGTGCCCTCCGTGCCCACCATCAAGCCGGACCAGTGGGAGCATCTGTTAGGTTTATCGTCCCGAAACCAGCGCCGTCAGTACTACCTCTACCTGTGGAACATTGAAATGGTTCGATTGGGACAGAAGCTGAAAAAGGAGCGCAACAGGAAGAGATCGCCAAGCGGCGGGAAGAGCTAATGAAGACGACGGCGGCAAACGATCACATCGTGTACGGGCTGTTTCACAACACAATGTTCCTGCGGATATACGACTCGAAGATGGATCACTTTCACAACAACCGGCTCGTTCAAGCGATGCAGTTCGGGTGCAATCTGGTGATCGATTGCTCGTACGATGATTACATGAACGATAAGGAGATGCGCAACACGGCGAAGAGCCTGATGCTGTGTTTCGCGCTCAACCGGTCCCACGAGGAACCGTTCAACATTCATCACTGCAATGCAAACTATGGCAAGACGACGATGAAACAGCTCGAAAAGCATCTGGTGCAGATCCACCAGCCCGAGTTTCCGTTCAACGTTACCGATCGGAGTTATACGGAGCTTTTCCCCAAGGAGCGGCTGGTCTACCTGACGCCGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CNS08R0N             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACCGTTCAACATTCATCACTGCAATGCAAACTATGGCAAGACGACGATGAAACAGCTCGAAAAGCATCTGGTGCAGATCCACCAGCCCGAGTTTCCGTTCAACGTTACCGATCGGAGTTATACGGAGCTTTTCCCCAAGGAGCGGCTGGTCTACCTGACGCCGCACTGCAAGAACGATCTGACCGAGTTTAACCCAGACGATGTGTACATAATCGGCGCCATGGTGGACAAATCCTCCCAGGAGGCCGTTTCGCTCGGCAAGGCCAAGAAGCTTGGTCTGCGGATGGCACGGCTCCCGCTGGATCGGTACTTTCA GTTTA AGAGCGGC AA ATC GCTTACCCTCG ATCAGATGGTAGCGATCATGCTGGAGCTGAAAA CG AG CAACAACTTCGAGAAAGCGTTCCAGCACGTACCCCGCCGCAAGATAACGACGGTGGATGAGGCGGCAGCCAAAGAGCAGGAGATGCGAGAGGTGGCGAAATTT AAATTTAACTTCAACAACAAACGGGCGGGCGATAAGCGAAACATTAGTAAACAAAGTTCCCATCCCAAGTTAGGGAAAGGTAGGTATTAAATGAGAGGCGTGAGTGAGAGGAAGCCATTGCGTGGCAGTTCTGTATTGTGGGTTTAAAAGATGGTCCAACCCGTCGTTGTACGGTAGACGGGTACAGTCTCCCCAGTCACACTTCAAAAAAGATGATGGTCGTTGCCTTTTGGTGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX624850             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GTGGACAAATCCTCCCAGGAGGCCGTTTCGCTCGGCAAGGCCAAGAAGCTTGGTCTGCGGATGGCACGGCTCCCGCTGGATCGGTACTTTCA GTTTA AGAGCGGC AA ATC GCTTACCCTCG ATCAGATGGTAGCGATCATGCTGGAGCTGAAAA CG AG CAACAACTTCGAGAAAGCGTTCCAGCACGTACCCCGCCGCAAGATAACGACGGTGGATGAGGCGGCAGCCAAAGAGCAGGAGATGCGAGAGGTGGCGAAATTT AAATTTAACTTCAACAACAAACGGGCGGGCGATAAGCGAAACAATAGTAAACAAAGTTCCCATCCCAAGTTAGGGAAAGGTAGGTATTAAATGAGAGGCGTGAGTGAGAGGAAGCCATTGCGTGGCAGTTCTATATTGTAAGTTTAAAAGATAGTCCAACCCGTCGTTGTACGGTAGACGGGTACAGTCTCCCCAGTCACAAGCGAAGATAGATGATGGTCGTTGCCTTTTGGTGTGCTTAATTGCGACGCCTTCGGGTTCTGCTGATACGCCACGCGTTCGGTTCCTCGTACTTGTTGTACAGCGGTTCCAGCCGTTGGTTCTTTTTGAACTTGCTGAGCTTCGTGGGGTCCGAGAAGCGGAAGAAGGCCGGTGCAAACTCTACCAACCATTTCGGATCGATCGTGGTCACCTCGCGCATGTACTCCTTCGTCGTCTGGACGAGCTCGTGATAGACNACCCtag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX624229             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     nTGGATCGGTACTTTCAGGTTTATAGAGCGGCTAATATCGGCTTACCCTCGTATCAGATGGTAGCGATCATGCTGGAGCTGAAAANCGTAGTCAACAACTTCGAGAAAGCGTTCCAGCACGTACCCCGCCGCAAGATAACGACGGTGGATGAGGCGGCAGCCAAAGAGCAGGAGATGCGAGAGGTGGCGAAATTTGAAATTTAACTTCAACAACAAACGGGCGGGCGATAAGCGAAACAATAGTAAACAAAGTTCCCATCCCAAGTTAGGGAAAGGTAGGTATAAAATGAGAGGCGTGAGTGAGAGGAAGCCATTGCGTGGCAGTTCTATATNGTAAGTTTANAAGATAGTCCAACCCGTCGTTGTACGGTAGACGGGTACAGTCTCCCCAGTCACAAGCGANGATAGATGATGGTCGTTGCCTTTTGGTGTGCTTANTTGCGACGCNTTCGGGTTCTGATGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL BX617350             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CATTGCGTGGCAGTTCTATATTGTAAGTTTAAAAGATAGTCCAACCCGTCGTTGTACGGTAGACGGGTACAGTCTCCCCAGTCACAAGCGAAGATAGATGATGGTCGTTGCCTTTTGGTGTGCTTAATTGCGACGCCTTCGGGTTCTGCTGATACGCCACGCGTTCGGTTCCTCGTACTTGTTGTACAGCGGTTCCAGCCGTTGGTTCTTTTTGAACTTGCTGAGCTTCGTGGGGTCCGAGAAGCGGAAGAAGGCCGGTGCAAACTCTACCAACCATTTCGGATCGATCGTGGTCACCTCGCGCATGTACTCCTTCGTCGTCTGGACGAGCTCGTGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AGA282463            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTACGGTAGACGGGTACAGTCTCCCCAGTCACAAGCGAAGATAGATGATGGTCGTTGCCTTTTGGTGTGCTTAATTGCGACGCCTTCGGGTTCTGCTGATACGCCACGCGTTCGGTTCCTCGTACTTGTTGTACAGCGGTTCCAGCCGTTGGTTCTTTTTGAACTTGCTGAGCTTCGTGGGGTCCGAGAAGCGGAAGAAGGCCGGTGCAAACTCTACCAACCATTTCGGATCGATCGTGGTCACCTCGCGCATGTACTCCTTCGTCGTCTGGACGAGCTCGTGATAGACAACCCATTCCGGTTG CCGGTTGAACAGTGC ACTGGATGGATGAATGTAAACGACCTGCGAATCCACCAACGTTCGGTAGCCCTCCTGCGGGTCCTT CTTGGCCGCATTGCGGAAGAACCCAGAGCAGATCGCTTTCTGCACGCGTACCGTATTCTTGCCCGCCGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL BX467474             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                acCGAGCTCGTGATAGACCACCCATTCCGGTTGCCCGGTTGAACAGTGCAACTGGATGGATGAATGTAAACGACCTGCGAATCCACCNACGTTCGGTAGCCCTCCTGCGGGTCCTTCCTTGGCCGCATTGCGGAAGAACCCAGAGCA ATCGCTTTCTGCACGCGTACCGTATTCTTGCCCGCCGAAACCACGTCCAGCTTGTGTCGATCCATAATGCCCAGCAGCTGCTTGCGCACGTCCTGTGCCCGCTTCAGCGTACGAATCTGGACAAAGTTCTCGTAACACCAGGCGTTCGAGAACTTATTATTCTTCCAGCTATTGTAAACGGCCAGCAGCGTCAAATGGTCACCCTCGATTTGGTTAAACTTTGCCTTCTTCTGATCGGCCAGTGCTTGTTTGTCCTTTGGCCGGTAGAACACGTTCTGCACCGAAAGCATGGAAACGATCGTCAGCACTTCGTCGGAGCACTGGAGCGCTACGGACATGATCAGCAGCTTAGAAAGGTTCGGCTCGAGCGGAAACTCTGCCATCCTTCGGCCGAGCCGCGTGAGCAAACCTTCATTGTCGAGGGCTGATAGCGAGTGGAGCTGTTCCAGCGCCATCACCAGCGATTCCACCGGCGGCGCATCCATGAAATCAAAGTGCAGCAGATCGTTAATGCCCATCGTTTTCAGCTGCAGTACCGTGGTGGCTAGATTGGTTCGCTGATTTCCGGCACCGGGGTGGGCAACATTTCATCCCGTCGGGATTCTGCCT]




>consensus_8249#0
GCGATTTACAGCACATCTATTGTACAACAGGCGGGCCCGAAAATGTTACGTACATTTGCG
CTTACGGCAAGAATATTTGCGAAAACCTCGTTTCCCGCCTCGCTCGGTGGACGCCACCTG
CAGCAACCGGCCTGCGGTGCCGCATTATGGAAACAGTACACGAATCTTCCCCACAGCAAA
GAGCTACCGGAGCAGAAAGCCGATGGTAGCGAAACGGCCAAACCCAATAGCACCACCACA
CCCGGGTTCGATGCGGAGAAGCGTAGAAAAGTGCTCGAGCTATATGTTGACGGTGATGCG
GCAGGAGGGTAAAAAGGTGCCCTCCGTGCCCACCATCAAGCCGGACCAGTGGGAGCATCT
GTTAGGTTTATCGTCCCGAAACCAGCGCCGTCAGTACTACCTCTACCTGTGGAACATTGA
AATGGTTCGATTGGGACAGAAGCTGAAAAAGGAGCGCAACAGGAAGAGATCGCCAAGCGG
CGGGAAGAGCTAATGAAGACGACGGCGGCAAACGATCACATCGTGTACGGGCTGTTTCAC
AACACAATGTTCCTGCGGATATACGACTCGAAGATGGATCACTTTCACAACAACCGGCTC
GTTCAAGCGATGCAGTTCGGGTGCAATCTGGTGATCGATTGCTCGTACGATGATTACATG
AACGATAAGGAGATGCGCAACACGGCGAAGAGCCTGATGCTGTGTTTCGCGCTCAACCGG
TCCCACGAGGAACCGTTCAACATTCATCACTGCAATGCAAACTATGGCAAGACGACGATG
AAACAGCTCGAAAAGCATCTGGTGCAGATCCACCAGCCCGAGTTTCCGTTCAACGTTACC
GATCGGAGTTATACGGAGCTTTTCCCCAAGGAGCGGCTGGTCTACCTGACGCCGCACTGC
AAGAACGATCTGACCGAGTTTAACCCAGACGATGTGTACATAATCGGCGCCATGGTGGAC
AAATCCTCCCAGGAGGCCGTTTCGCTCGGCAAGGCCAAGAAGCTTGGTCTGCGGATGGCA
CGGCTCCCGCTGGATCGGTACTTTCAGTTTAAGAGCGGCAAATCGCTTACCCTCGATCAG
ATGGTAGCGATCATGCTGGAGCTGAAAACGAGCAACAACTTCGAGAAAGCGTTCCAGCAC
GTACCCCGCCGCAAGATAACGACGGTGGATGAGGCGGCAGCCAAAGAGCAGGAGATGCGA
GAGGTGGCGAAATTTAAATTTAACTTCAACAACAAACGGGCGGGCGATAAGCGAAACAAT
AGTAAACAAAGTTCCCATCCCAAGTTAGGGAAAGGTAGGTATTAAATGAGAGGCGTGAGT
GAGAGGAAGCCATTGCGTGGCAGTTCTATATTGTAAGTTTAAAAGATAGTCCAACCCGTC
GTTGTACGGTAGACGGGTACAGTCTCCCCAGTCACAAGCGAAGATAGATGATGGTCGTTG
CCTTTTGGTGTGCTTAATTGCGACGCCTTCGGGTTCTGCTGATACGCCACGCGTTCGGTT
CCTCGTACTTGTTGTACAGCGGTTCCAGCCGTTGGTTCTTTTTGAACTTGCTGAGCTTCG
TGGGGTCCGAGAAGCGGAAGAAGGCCGGTGCAAACTCTACCAACCATTTCGGATCGATCG
TGGTCACCTCGCGCATGTACTCCTTCGTCGTCTGGACGAGCTCGTGATAGACNACCCATT
CCGGTTGCCGGTTGAACAGTGCACTGGATGGATGAATGTAAACGACCTGCGAATCCACCA
ACGTTCGGTAGCCCTCCTGCGGGTCCTTCTTGGCCGCATTGCGGAAGAACCCAGAGCAGA
TCGCTTTCTGCACGCGTACCGTATTCTTGCCCGCCGAAACCACGTCCAGCTTGTGTCGAT
CCATAATGCCCAGCAGCTGCTTGCGCACGTCCTGTGCCCGCTTCAGCGTACGAATCTGGA
CAAAGTTCTCGTAACACCAGGCGTTCGAGAACTTATTATTCTTCCAGCTATTGTAAACGG
CCAGCAGCGTCAAATGGTCACCCTCGATTTGGTTAAACTTTGCCTTCTTCTGATCGGCCA
GTGCTTGTTTGTCCTTTGGCCGGTAGAACACGTTCTGCACCGAAAGCATGGAAACGATCG
TCAGCACTTCGTCGGAGCACTGGAGCGCTACGGACATGATCAGCAGCTTAGAAAGGTTCG
GCTCGAGCGGAAACTCTGCCATCCTTCGGCCGAGCCGCGTGAGCAAACCTTCATTGTCGA
GGGCTGATAGCGAGTGGAGCTGTTCCAGCGCCATCACCAGCGATTCCACCGGCGGCGCAT
CCATGAAATCAAAGTGCAGCAGATCGTTAATGCCCATCGTTTTCAGCTGCAGTACCGTGG
TGGCTAGATTGGTTCGCTGATTTCCGGCACCGGGGTGGGCAACATTTCATCCCGTCGGGA
TTCTGCCT

consensusID : consensus_8249#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 469
fasta sequence

                              [CAAATGGTCACCCTCGATTTGGTTAAACTTTGCCTTCTTCTGATCGGCCAGTGCTTGTTTGTCCTTTGGCCGGTAGAACACGTTCTGCACCGAAAGCATGGAAACGATCGTCAGCACTTCGTCGGAGCACTGGAGCGCTACGGACATGATCAGCAGCTTAGAAAGGTTCGGCTCGAGCGGAAACTCTGCCATCCTTCGGCCGAGCCGCGTGAGCAAACCTTCATTGTCGAGGGCTGATAGCGAGTGGAGCTGTTCCAGCGCCATCACCAGCGATTCCACCGGCGGCGCATCCATGAAATCAAAGTGCAGCAGATCGTTAATGCCCATCGTTTTCAGCTGCAGTAGCGTGGTGGCTAGATTGGTTCGCTGAATTTCCGGCACCGGGGTGGGCAACATTTCATCCCGATAGGCGCGCTCCGTGTAGAGCCGGTAGGCTTTGCCCGGCCCGGTACGACCGGCACGGCCCGCC]

[-] EMBL AGA280832            [CAAATGGTCACCCTCGATTTGGTTAAACTTTGCCTTCTTCTGATCGGCCAGTGCTTGTTTGTCCTTTGGCCGGTAGAACACGTTCTGCACCGAAAGCATGGAAACGATCGTCAGCACTTCGTCGGAGCACTGGAGCGCTACGGACATGATCAGCAGCTTAGAAAGGTTCGGCTCGAGCGGAAACTCTGCCATCCTTCGGCCGAGCCGCGTGAGCAAACCTTCATTGTCGAGGGCTGATAGCGAGTGGAGCTGTTCCAGCGCCATCACCAGCGATTCCACCGGCGGCGCATCCATGAAATCAAAGTGCAGCAGATCGTTAATGCCCATCGTTTTCAGCTGCAGTAGCGTGGTGGCTAGATTGGTTCGCTGAATTTCCGGCACCGGGGTGGGCAACATTTCATCCCGATAGGCGCGCTCCGTGTAGAGCCGGTAGGCTTTGCCCGGCCCGGTACGACCGGCACGGCCCGCC]




>consensus_8249#1
CAAATGGTCACCCTCGATTTGGTTAAACTTTGCCTTCTTCTGATCGGCCAGTGCTTGTTT
GTCCTTTGGCCGGTAGAACACGTTCTGCACCGAAAGCATGGAAACGATCGTCAGCACTTC
GTCGGAGCACTGGAGCGCTACGGACATGATCAGCAGCTTAGAAAGGTTCGGCTCGAGCGG
AAACTCTGCCATCCTTCGGCCGAGCCGCGTGAGCAAACCTTCATTGTCGAGGGCTGATAG
CGAGTGGAGCTGTTCCAGCGCCATCACCAGCGATTCCACCGGCGGCGCATCCATGAAATC
AAAGTGCAGCAGATCGTTAATGCCCATCGTTTTCAGCTGCAGTAGCGTGGTGGCTAGATT
GGTTCGCTGAATTTCCGGCACCGGGGTGGGCAACATTTCATCCCGATAGGCGCGCTCCGT
GTAGAGCCGGTAGGCTTTGCCCGGCCCGGTACGACCGGCACGGCCCGCC

consensusID : consensus_8249#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 467
fasta sequence

                              [GAATCCCCGAGGTTTATATACGACTCGAAGATGGATCACTTTCATCAACAACCGGCTCGTTCAAGCGATGCAGTTCGGGTGCAATCTGGTGATCGATTGCTCGTACGATGATTACATGAACGATAAGGAGATGCGCAACACGGCGAAGCAGCTGATGCTGTGCTTCGCGCTCAACCGGTCCCACGAGGAACCGTTCAACATTCACCACTGCAATGCAAACTATGGCAAGACGACGATGAAACAGCTCGAAAAGCATCTGGTGCAGATCCACCAGCCCGAGTTCCCGTTCAACGTTACCGATCGGAGCTATACGGAGCTTTTCCCCAAAGAGCGGCTGGTCTACCTGACGCCCCACTGNAAGAACGATCTGACCGAGTTTAACCCAGACGATGTGTACATAATCGGCGCGATGGTGGACAAATCCTCCCAGGAGGCTGTTTCGCTCGGCAAGGCCAAGAAGCTTGGTC]

[+] EMBL AL694605             [GAATCCCCGAGGTTTATATACGACTCGAAGATGGATCACTTTCATCAACAACCGGCTCGTTCAAGCGATGCAGTTCGGGTGCAATCTGGTGATCGATTGCTCGTACGATGATTACATGAACGATAAGGAGATGCGCAACACGGCGAAGCAGCTGATGCTGTGCTTCGCGCTCAACCGGTCCCACGAGGAACCGTTCAACATTCACCACTGCAATGCAAACTATGGCAAGACGACGATGAAACAGCTCGAAAAGCATCTGGTGCAGATCCACCAGCCCGAGTTCCCGTTCAACGTTACCGATCGGAGCTATACGGAGCTTTTCCCCAAAGAGCGGCTGGTCTACCTGACGCCCCACTGNAAGAACGATCTGACCGAGTTTAACCCAGACGATGTGTACATAATCGGCGCGATGGTGGACAAATCCTCCCAGGAGGCTGTTTCGCTCGGCAAGGCCAAGAAGCTTGGTC]




>consensus_8249#2
GAATCCCCGAGGTTTATATACGACTCGAAGATGGATCACTTTCATCAACAACCGGCTCGT
TCAAGCGATGCAGTTCGGGTGCAATCTGGTGATCGATTGCTCGTACGATGATTACATGAA
CGATAAGGAGATGCGCAACACGGCGAAGCAGCTGATGCTGTGCTTCGCGCTCAACCGGTC
CCACGAGGAACCGTTCAACATTCACCACTGCAATGCAAACTATGGCAAGACGACGATGAA
ACAGCTCGAAAAGCATCTGGTGCAGATCCACCAGCCCGAGTTCCCGTTCAACGTTACCGA
TCGGAGCTATACGGAGCTTTTCCCCAAAGAGCGGCTGGTCTACCTGACGCCCCACTGNAA
GAACGATCTGACCGAGTTTAACCCAGACGATGTGTACATAATCGGCGCGATGGTGGACAA
ATCCTCCCAGGAGGCTGTTTCGCTCGGCAAGGCCAAGAAGCTTGGTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8249#0      GCGATTTACAGCACATCTATTGTACAACAGGCGGGCCCGAAAATGTTACGTACATTTGCG 60
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      CTTACGGCAAGAATATTTGCGAAAACCTCGTTTCCCGCCTCGCTCGGTGGACGCCACCTG 120
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      CAGCAACCGGCCTGCGGTGCCGCATTATGGAAACAGTACACGAATCTTCCCCACAGCAAA 180
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      GAGCTACCGGAGCAGAAAGCCGATGGTAGCGAAACGGCCAAACCCAATAGCACCACCACA 240
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      CCCGGGTTCGATGCGGAGAAGCGTAGAAAAGTGCTCGAGCTATATGTTGACGGTGATGCG 300
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      GCAGGAGGGTAAAAAGGTGCCCTCCGTGCCCACCATCAAGCCGGACCAGTGGGAGCATCT 360
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      GTTAGGTTTATCGTCCCGAAACCAGCGCCGTCAGTACTACCTCTACCTGTGGAACATTGA 420
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      AATGGTTCGATTGGGACAGAAGCTGAAAAAGGAGCGCAACAGGAAGAGATCGCCAAGCGG 480
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      CGGGAAGAGCTAATGAAGACGACGGCGGCAAACGATCACATCGTGTACGGGCTGTTTCAC 540
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      AACACAATGTTCCTGCGG---ATATACGACTCGAAGATGGATCACTTTCA-C--AACAAC 594
consensus_8249#2      ------GAATCCCCGAGGTTTATATACGACTCGAAGATGGATCACTTTCATC--AACAAC 52
consensus_8249#1      ------------CAAATGGTCACCCTCGATTTGGTTAAACTTTGCCTTCTTCTGATCGGC 48
                                  *    *   *    *** * *   *    *  * ***  *  * *  *

consensus_8249#0      CGG--CTCGTTCAAGCGATG-CAGTTCGGGTGCAATCTGGTGATCGATTGCTCGTACGAT 651
consensus_8249#2      CGG--CTCGTTCAAGCGATG-CAGTTCGGGTGCAATCTGGTGATCGATTGCTCGTACGAT 109
consensus_8249#1      CAGTGCTTGTTTGTCCTTTGGCCGGTAGAACACGTTCTGC--ACCGAAAGCATGGA-AAC 105
                      * *  ** ***    *  ** * * * *    *  ****   * ***  **  * *  * 

consensus_8249#0      GATTACATGAACGATAAGGAGATGCGCAACACGGCGAAGAGCCTGATGCTGTGTTTCGCG 711
consensus_8249#2      GATTACATGAACGATAAGGAGATGCGCAACACGGCGAAGCAGCTGATGCTGTGCTTCGCG 169
consensus_8249#1      GAT--CGTCAGCACTTCGTCGGAGCACTGGAGCGCTACGGACATGATCAGCAGCTTAGAA 163
                      ***  * * * *  *  *  *  ** *   *  ** * *    ****     * ** *  

consensus_8249#0      CTCAACCGGTCCCACGAGGAACCGTTCAACATTCATCACTGCAATGCAAACTATGGCAAG 771
consensus_8249#2      CTCAACCGGTCCCACGAGGAACCGTTCAACATTCACCACTGCAATGCAAACTATGGCAAG 229
consensus_8249#1      AGGTTCGGCTCGAGCGGAAACTCTGCCATCCTTCGGCCGAGCCGCGTGAGCAAACCTTCA 223
                           * * **   **   *  *   ** * ***  *   **   *  * * *       

consensus_8249#0      ACGACGATGAAACAGCTCGAAAAGCATCTGGTGCAGATCCACCAGCC-CGAGTTTCCGTT 830
consensus_8249#2      ACGACGATGAAACAGCTCGAAAAGCATCTGGTGCAGATCCACCAGCC-CGAGTTCCCGTT 288
consensus_8249#1      TTGTCGAGGGCTGATAGCGAGTGG-AGCTGTTCCAGCGCCATCACCAGCGATTCCACCGG 282
                        * *** *    *   ***   * * *** * ***  *** ** *  *** *   *   

consensus_8249#0      CAACGTTACCGATCGGAGTTATACGGAGCTTTTCCCCAAGGAGCGGCTGGTCTACCTGAC 890
consensus_8249#2      CAACGTTACCGATCGGAGCTATACGGAGCTTTTCCCCAAAGAGCGGCTGGTCTACCTGAC 348
consensus_8249#1      CGGCGC-ATCCATGAAATCAAAGTGCAGCAGATCGTTAATGCCCATCGTTTTCAGCTGCA 341
                      *  **  * * **   *   *   * ***   **   ** *  *  *   *  * ***  

consensus_8249#0      GCCGCACTGCA---AGAACGATCTGACCGAGTTTAACCCAGACGATGTGTACATAATCGG 947
consensus_8249#2      GCCCCACTGNA---AGAACGATCTGACCGAGTTTAACCCAGACGATGTGTACATAATCGG 405
consensus_8249#1      GTAGCGTGGTGGCTAGATTGGTTCGCTGAATTTCCGGCACCGGGGTGGGCAACATTTCAT 401
                      *   *   *     ***  * *  *    * **    *     * ** * *     **  

consensus_8249#0      CGCCATGGTGGA----CAAATCCTCCCAGGAGGCCGTTTC--GCTCGGCAAGGCCAAGAA 1001
consensus_8249#2      CGCGATGGTGGA----CAAATCCTCCCAGGAGGCTGTTTC--GCTCGGCAAGGCCAAGAA 459
consensus_8249#1      CCCGATAGGCGCGCTCCGTGTAGAGCCGGTAGGCTTTGCCCGGCCCGGTACGACCGGCAC 461
                      * * ** *  *     *   *    ** * ****  *  *  ** *** * * **   * 

consensus_8249#0      GCTTGGTCTGCGGATGGCACGGCTCCCGCTGGATCGGTACTTTCAGTTTAAGAGCGGCAA 1061
consensus_8249#2      GCTTGGTC---------------------------------------------------- 467
consensus_8249#1      GGCCCGCC---------------------------------------------------- 469
                      *    * *                                                    

consensus_8249#0      ATCGCTTACCCTCGATCAGATGGTAGCGATCATGCTGGAGCTGAAAACGAGCAACAACTT 1121
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      CGAGAAAGCGTTCCAGCACGTACCCCGCCGCAAGATAACGACGGTGGATGAGGCGGCAGC 1181
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      CAAAGAGCAGGAGATGCGAGAGGTGGCGAAATTTAAATTTAACTTCAACAACAAACGGGC 1241
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      GGGCGATAAGCGAAACAATAGTAAACAAAGTTCCCATCCCAAGTTAGGGAAAGGTAGGTA 1301
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      TTAAATGAGAGGCGTGAGTGAGAGGAAGCCATTGCGTGGCAGTTCTATATTGTAAGTTTA 1361
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      AAAGATAGTCCAACCCGTCGTTGTACGGTAGACGGGTACAGTCTCCCCAGTCACAAGCGA 1421
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      AGATAGATGATGGTCGTTGCCTTTTGGTGTGCTTAATTGCGACGCCTTCGGGTTCTGCTG 1481
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      ATACGCCACGCGTTCGGTTCCTCGTACTTGTTGTACAGCGGTTCCAGCCGTTGGTTCTTT 1541
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      TTGAACTTGCTGAGCTTCGTGGGGTCCGAGAAGCGGAAGAAGGCCGGTGCAAACTCTACC 1601
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      AACCATTTCGGATCGATCGTGGTCACCTCGCGCATGTACTCCTTCGTCGTCTGGACGAGC 1661
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      TCGTGATAGACNACCCATTCCGGTTGCCGGTTGAACAGTGCACTGGATGGATGAATGTAA 1721
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      ACGACCTGCGAATCCACCAACGTTCGGTAGCCCTCCTGCGGGTCCTTCTTGGCCGCATTG 1781
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      CGGAAGAACCCAGAGCAGATCGCTTTCTGCACGCGTACCGTATTCTTGCCCGCCGAAACC 1841
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      ACGTCCAGCTTGTGTCGATCCATAATGCCCAGCAGCTGCTTGCGCACGTCCTGTGCCCGC 1901
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      TTCAGCGTACGAATCTGGACAAAGTTCTCGTAACACCAGGCGTTCGAGAACTTATTATTC 1961
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      TTCCAGCTATTGTAAACGGCCAGCAGCGTCAAATGGTCACCCTCGATTTGGTTAAACTTT 2021
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      GCCTTCTTCTGATCGGCCAGTGCTTGTTTGTCCTTTGGCCGGTAGAACACGTTCTGCACC 2081
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      GAAAGCATGGAAACGATCGTCAGCACTTCGTCGGAGCACTGGAGCGCTACGGACATGATC 2141
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      AGCAGCTTAGAAAGGTTCGGCTCGAGCGGAAACTCTGCCATCCTTCGGCCGAGCCGCGTG 2201
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      AGCAAACCTTCATTGTCGAGGGCTGATAGCGAGTGGAGCTGTTCCAGCGCCATCACCAGC 2261
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      GATTCCACCGGCGGCGCATCCATGAAATCAAAGTGCAGCAGATCGTTAATGCCCATCGTT 2321
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      TTCAGCTGCAGTACCGTGGTGGCTAGATTGGTTCGCTGATTTCCGGCACCGGGGTGGGCA 2381
consensus_8249#2      ------------------------------------------------------------
consensus_8249#1      ------------------------------------------------------------
                                                                                  

consensus_8249#0      ACATTTCATCCCGTCGGGATTCTGCCT 2408
consensus_8249#2      ---------------------------
consensus_8249#1      ---------------------------