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Anopheles gambiae
cluster # 8273 cluster # 8273       Sequences # 9       consensus # 8


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8273#0 length = 766 sequences # 1  
consensus_8273#1 length = 702 sequences # 1  
consensus_8273#2 length = 656 sequences # 1  
consensus_8273#3 length = 635 sequences # 2  
consensus_8273#4 length = 430 sequences # 1  
consensus_8273#5 length = 355 sequences # 1  
consensus_8273#6 length = 207 sequences # 1  
consensus_8273#7 length = 86 sequences # 1  

consensusID : consensus_8273#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 766
fasta sequence
                              [ACAGTGGTAATTGACTTCGTGGGTGCTTTCAAGTTCGGTCTGTATGAGGTGTTCAAAATCAAGTACGCTGACATGATCGGCGAGGAGAATGCCTACCTGTACCGTACCTGGGTGTATCTGGGCGCTTCCGCCTCGGCCGAATTCTTCGCCGACATTGCGCTGGCCCCGCTGGAGGCGGCCAAGGTCAAGATCCAGACCATGCCCGGATACGCCAACACGATGCGACAGGCCATGCCGAAGATGATGGGCGAGGAGGGCGTTATGGCGTTCTACAAGGGGCTGGTTCCGCTGTGGTGCCGTCAGATCCCGTACACCATGATGAAGTTCGCCTGCTTCGAGAAGACCGTCGAGCTGTTGTACAAGCATGTCGTGCCGAAGCCACGCGACCAGTGCTCGAATGGTGAGCAGCTGATTGTGACGTTCGCTGCCGGCTACATTGCCGGTGTGTTCTGTGCCGTGGTGTCCCATCCGGCCGATGTGGTGGTGTCCAAGCTGAACCAGGCCAAGGGATCGTCCGCGATCGATGTGGCCAAGCAGCTGGGCTTCATGGGCATGTGGAACGGTCTGACGCCGCGTATCATCATGATCGGTACGCTGACCGCCCTGCAGTGGTTCATCTACGACGGTGTGAAGGTTGCCCTCTCCATCCCCCGCCCACCCCCGCCAGAGATGCCGGAGTCGCTGAAGAAGAAGCTGAACGTAGAGTAATTCTAGCGCCACGGATGAAAGGAAGTCGAAGCATTTGTTTGTGATGATGGTGTGCAGC]

[+] EMBL BX615908             [ACAGTGGTAATTGACTTCGTGGGTGCTTTCAAGTTCGGTCTGTATGAGGTGTTCAAAATCAAGTACGCTGACATGATCGGCGAGGAGAATGCCTACCTGTACCGTACCTGGGTGTATCTGGGCGCTTCCGCCTCGGCCGAATTCTTCGCCGACATTGCGCTGGCCCCGCTGGAGGCGGCCAAGGTCAAGATCCAGACCATGCCCGGATACGCCAACACGATGCGACAGGCCATGCCGAAGATGATGGGCGAGGAGGGCGTTATGGCGTTCTACAAGGGGCTGGTTCCGCTGTGGTGCCGTCAGATCCCGTACACCATGATGAAGTTCGCCTGCTTCGAGAAGACCGTCGAGCTGTTGTACAAGCATGTCGTGCCGAAGCCACGCGACCAGTGCTCGAATGGTGAGCAGCTGATTGTGACGTTCGCTGCCGGCTACATTGCCGGTGTGTTCTGTGCCGTGGTGTCCCATCCGGCCGATGTGGTGGTGTCCAAGCTGAACCAGGCCAAGGGATCGTCCGCGATCGATGTGGCCAAGCAGCTGGGCTTCATGGGCATGTGGAACGGTCTGACGCCGCGTATCATCATGATCGGTACGCTGACCGCCCTGCAGTGGTTCATCTACGACGGTGTGAAGGTTGCCCTCTCCATCCCCCGCCCACCCCCGCCAGAGATGCCGGAGTCGCTGAAGAAGAAGCTGAACGTAGAGTAATTCTAGCGCCACGGATGAAAGGAAGTCGAAGCATTTGTTTGTGATGATGGTGTGCAGC]


>consensus_8273#0 ACAGTGGTAATTGACTTCGTGGGTGCTTTCAAGTTCGGTCTGTATGAGGTGTTCAAAATC AAGTACGCTGACATGATCGGCGAGGAGAATGCCTACCTGTACCGTACCTGGGTGTATCTG GGCGCTTCCGCCTCGGCCGAATTCTTCGCCGACATTGCGCTGGCCCCGCTGGAGGCGGCC AAGGTCAAGATCCAGACCATGCCCGGATACGCCAACACGATGCGACAGGCCATGCCGAAG ATGATGGGCGAGGAGGGCGTTATGGCGTTCTACAAGGGGCTGGTTCCGCTGTGGTGCCGT CAGATCCCGTACACCATGATGAAGTTCGCCTGCTTCGAGAAGACCGTCGAGCTGTTGTAC AAGCATGTCGTGCCGAAGCCACGCGACCAGTGCTCGAATGGTGAGCAGCTGATTGTGACG TTCGCTGCCGGCTACATTGCCGGTGTGTTCTGTGCCGTGGTGTCCCATCCGGCCGATGTG GTGGTGTCCAAGCTGAACCAGGCCAAGGGATCGTCCGCGATCGATGTGGCCAAGCAGCTG GGCTTCATGGGCATGTGGAACGGTCTGACGCCGCGTATCATCATGATCGGTACGCTGACC GCCCTGCAGTGGTTCATCTACGACGGTGTGAAGGTTGCCCTCTCCATCCCCCGCCCACCC CCGCCAGAGATGCCGGAGTCGCTGAAGAAGAAGCTGAACGTAGAGTAATTCTAGCGCCAC GGATGAAAGGAAGTCGAAGCATTTGTTTGTGATGATGGTGTGCAGC



consensusID : consensus_8273#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 702
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTGATGTTGCTACAGCAACCGCAGCATCCGCCACAGCAGAAACAGAACCATCTTGAACAGCAACGGACAGCGAAGGCACAGCAGCAGCAGCAGCAGCAGCAACAACAGTTGGCCGCGTTGTTCCGACAAGCCAGTGGTGGTGCGGTGGACGGTAGCCCGGTTCTAGCGAAAGTGGATGTGACGAACAGTGATGCAGCTAGTGCGCTGCTGTTGGGCGGCAAGCAGGACAATCGAAAGGGACGGACCGTGCAGGCGAACGGGGCACCGGGAGCAAATGTAACGCTGGGCATACCGACGGGTGTGAGCGGGCCAGTGAGTGCGGGCGTACTAGAGCCTTGTCCGTTCGATTTCGACAGTGACAGTTTGGACGAAGCGTGCCGGAGCTTGATCCGGGATATGAACGAGTACGGTGTCTGTGTGCTGGACAATTTCCTTGGCCAGGAGCGGGGCCAGCAAGTGCTGGACGAGGTGACCGGAATGTATTCGTCTGGAGTGTTTCGGGACGGCCAGCTAGTGTCGAACCGAGGCGCTAACAATTTACGCCATATACGAGGAGACAAAATCACGTGGATAGGCGGCAAGGAACCGGGATGCAGCAGTATCGGCTACCTTATCAATTGTGTGGATGCAGTGATTACCAACTGCAAACGGATGGAGAACAAC]

[+] EMBL BM647384             [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTGATGTTGCTACAGCAACCGCAGCATCCGCCACAGCAGAAACAGAACCATCTTGAACAGCAACGGACAGCGAAGGCACAGCAGCAGCAGCAGCAGCAGCAACAACAGTTGGCCGCGTTGTTCCGACAAGCCAGTGGTGGTGCGGTGGACGGTAGCCCGGTTCTAGCGAAAGTGGATGTGACGAACAGTGATGCAGCTAGTGCGCTGCTGTTGGGCGGCAAGCAGGACAATCGAAAGGGACGGACCGTGCAGGCGAACGGGGCACCGGGAGCAAATGTAACGCTGGGCATACCGACGGGTGTGAGCGGGCCAGTGAGTGCGGGCGTACTAGAGCCTTGTCCGTTCGATTTCGACAGTGACAGTTTGGACGAAGCGTGCCGGAGCTTGATCCGGGATATGAACGAGTACGGTGTCTGTGTGCTGGACAATTTCCTTGGCCAGGAGCGGGGCCAGCAAGTGCTGGACGAGGTGACCGGAATGTATTCGTCTGGAGTGTTTCGGGACGGCCAGCTAGTGTCGAACCGAGGCGCTAACAATTTACGCCATATACGAGGAGACAAAATCACGTGGATAGGCGGCAAGGAACCGGGATGCAGCAGTATCGGCTACCTTATCAATTGTGTGGATGCAGTGATTACCAACTGCAAACGGATGGAGAACAAC]


>consensus_8273#1 CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTGATGTTGCTACAGCAACCG CAGCATCCGCCACAGCAGAAACAGAACCATCTTGAACAGCAACGGACAGCGAAGGCACAG CAGCAGCAGCAGCAGCAGCAACAACAGTTGGCCGCGTTGTTCCGACAAGCCAGTGGTGGT GCGGTGGACGGTAGCCCGGTTCTAGCGAAAGTGGATGTGACGAACAGTGATGCAGCTAGT GCGCTGCTGTTGGGCGGCAAGCAGGACAATCGAAAGGGACGGACCGTGCAGGCGAACGGG GCACCGGGAGCAAATGTAACGCTGGGCATACCGACGGGTGTGAGCGGGCCAGTGAGTGCG GGCGTACTAGAGCCTTGTCCGTTCGATTTCGACAGTGACAGTTTGGACGAAGCGTGCCGG AGCTTGATCCGGGATATGAACGAGTACGGTGTCTGTGTGCTGGACAATTTCCTTGGCCAG GAGCGGGGCCAGCAAGTGCTGGACGAGGTGACCGGAATGTATTCGTCTGGAGTGTTTCGG GACGGCCAGCTAGTGTCGAACCGAGGCGCTAACAATTTACGCCATATACGAGGAGACAAA ATCACGTGGATAGGCGGCAAGGAACCGGGATGCAGCAGTATCGGCTACCTTATCAATTGT GTGGATGCAGTGATTACCAACTGCAAACGGATGGAGAACAAC



consensusID : consensus_8273#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 656
fasta sequence
                              [GAGAAAGCTCACCCTGTCTGCGCTCCATTTGTGTTCCACAATTTCGCACAAAAAGCACCAGCACAGCACCGGCATCCTGCAAAATGTCGCTAAATCTTGGTGATCCTTTCCCCAACTTTACCGCCGAAACCACTATCGGGCCGATCGATTTCCACCAGTGGATCGGCGACGGCTGGGCAATCCTGTTTTCGCACCCCGCCGACTACACGCCCGTCTGCACGACGGAACTGGCGGCGGTGGCTAAGCTGGTGCCCGAGTTCACCAAGCGCAACGTGAAACCGATTGCCCTGTCGTGCGATTCGGTCGAGTCGCACCGTGGCTGGATCGAGGACATCAAAGCGTACGGCCAGCTGGCGCGGCCGACCCATTTCCCTTCCCGATCATTGACGATTCGAAGCGCGAGTGGGCGGTCAAGCTGAACATGCTGGACCGGGACGAGATAGGATCGGCTGGTCTTCCCCTAACCTGCCGGGCTGTGTTTGTGATCGATGCGGGCAAAAAGCTGCGCCTGTCCATCCTCTACCCAGCGACGACCGGGCGCAACTTTGCCGAAATTCTGCGCACCATCGACTCGATGCAGCTGACGGAAAAACGTCGGGTGGCAACGCAAGCCGATTGGATGCCGGGCGATAGCTGCATGGTACAGCCGACGGTTC]

[+] EMBL CNS09G4V             [GAGAAAGCTCACCCTGTCTGCGCTCCATTTGTGTTCCACAATTTCGCACAAAAAGCACCAGCACAGCACCGGCATCCTGCAAAATGTCGCTAAATCTTGGTGATCCTTTCCCCAACTTTACCGCCGAAACCACTATCGGGCCGATCGATTTCCACCAGTGGATCGGCGACGGCTGGGCAATCCTGTTTTCGCACCCCGCCGACTACACGCCCGTCTGCACGACGGAACTGGCGGCGGTGGCTAAGCTGGTGCCCGAGTTCACCAAGCGCAACGTGAAACCGATTGCCCTGTCGTGCGATTCGGTCGAGTCGCACCGTGGCTGGATCGAGGACATCAAAGCGTACGGCCAGCTGGCGCGGCCGACCCATTTCCCTTCCCGATCATTGACGATTCGAAGCGCGAGTGGGCGGTCAAGCTGAACATGCTGGACCGGGACGAGATAGGATCGGCTGGTCTTCCCCTAACCTGCCGGGCTGTGTTTGTGATCGATGCGGGCAAAAAGCTGCGCCTGTCCATCCTCTACCCAGCGACGACCGGGCGCAACTTTGCCGAAATTCTGCGCACCATCGACTCGATGCAGCTGACGGAAAAACGTCGGGTGGCAACGCAAGCCGATTGGATGCCGGGCGATAGCTGCATGGTACAGCCGACGGTTC]


>consensus_8273#2 GAGAAAGCTCACCCTGTCTGCGCTCCATTTGTGTTCCACAATTTCGCACAAAAAGCACCA GCACAGCACCGGCATCCTGCAAAATGTCGCTAAATCTTGGTGATCCTTTCCCCAACTTTA CCGCCGAAACCACTATCGGGCCGATCGATTTCCACCAGTGGATCGGCGACGGCTGGGCAA TCCTGTTTTCGCACCCCGCCGACTACACGCCCGTCTGCACGACGGAACTGGCGGCGGTGG CTAAGCTGGTGCCCGAGTTCACCAAGCGCAACGTGAAACCGATTGCCCTGTCGTGCGATT CGGTCGAGTCGCACCGTGGCTGGATCGAGGACATCAAAGCGTACGGCCAGCTGGCGCGGC CGACCCATTTCCCTTCCCGATCATTGACGATTCGAAGCGCGAGTGGGCGGTCAAGCTGAA CATGCTGGACCGGGACGAGATAGGATCGGCTGGTCTTCCCCTAACCTGCCGGGCTGTGTT TGTGATCGATGCGGGCAAAAAGCTGCGCCTGTCCATCCTCTACCCAGCGACGACCGGGCG CAACTTTGCCGAAATTCTGCGCACCATCGACTCGATGCAGCTGACGGAAAAACGTCGGGT GGCAACGCAAGCCGATTGGATGCCGGGCGATAGCTGCATGGTACAGCCGACGGTTC



consensusID : consensus_8273#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 635
fasta sequence
                              [CCGCGGACGCGTGGGCAGCATCTTGCGCTGTGTCGAACAAATTCGTCAACACCTTCGATGGAAAGACCTACGACTATGAGCTTGGCAACTGCTGGCATGTTGTGCTGCACACCGTCAAGCCTGACTACTATTTCTACGCCCAGGACTCGCACTTCATGAACTCGGACTACGAATACAACTGGAAGAACGGCTTCGGAGAGGATGAGCAGATCACCATCCTGGCCCGTCACGGCGAGGACAACCAGCTCTTCTTGAAGGCTATCCTTGGCCAGTACAAGCAGAACGACTACAACATCGATATCATCCCCCACGGACACGAGCTCCCGATGGTCTACATCAATGGCAAGCCCCAGCAGATCCACGAGAAGTACGCCGTCGAAATGTACACCAATGATGATGGTGGCGATCAGCCGCTGATCCGCGTCTATGCCCTGCCTGGCAACGAGCTGGAGATCAGCTTCCGCGATGACGACATCAAGATCGTGTTCGACGGATACCGTGCCCGTTTCTTCGCCGACCAGTCGTACTTCAACAACTTCGTCGGTCTTTGCGGTACCAACAATGGCGAAGGAGAGGACGACTTCATCACCCCCGACCAGTGCGTCATGCGCAAGCCTGAATACTTTGCCGCTTCG]

[+] EMBL BM590534             [CCGCGGACGCGTGGGCAGCATCTTGCGCTGTGTCGAACAAATTCGTCAACACCTTCGATGGAAAGACCTACGACTATGAGCTTGGCAACTGCTGGCATGTTGTGCTGCACACCGTCAAGCCTGACTACTATTTCTACGCCCAGGACTCGCACTTCATGAACTCGGACTACGAATACAACTGGAAGAACGGCTTCGGAGAGGATGAGCAGATCACCATCCTGGCCCGTCACGGCGAGGACAACCAGCTCTTCTTGAAGGCTATCCTTGGCCAGTACAAGCAGAACGACTACAACATCGATATCATCCCCCACGGACACGAGCTCCCGATGGTCTACATCAATGGCAAGCCCCAGCAGATCCACGAGAAGTACGCCGTCGAAATGTACACCAATGATGATGGTGGCGATCAGCCGCTGATCCGCGTCTATGCCCTGCCTGGCAACGAGCTGGAGATCAGCTTCCGCGATGACGACATCAAGATCGTGTTCGACGGATACCGTGCCCGTTTCTTCGCCGACCAGTCGTACTTCAACAACTTCGTCGGTCTTTGCGGTACCAACAATGGCGAAGGAGAGGACGACTTCATCACCCCCGACCAGTGCGTCATGCGCAAGCCTGAATACTTTGCCGCTTCG]
[+] EMBL BM611420             [CCGCGGACGCGTGGG        TGCGCTGTGTCGAACAAATTCGTCAACACCTTCGATGGAAAGACCTACGACTATGAGCTTGGCAACTGCTGGCATGTTGTGCTGCACACCGTCAAGCCTGACTACTATTTCTACGCCCAGGACTCGCACTTCATGAACTCGGACTACGAATACAACTGGAAGAACGGCTTCGGAGAGGATGAGCAGATCACCATCCTGGCCCGTCACGGCGAGGACAACCAGCTCTTCTTGAAGGCTATCCTTGGCCAGTACAAGCAGAACGACTACAACATCGATATCATCCCCCACGGACACGAGCTCCCGATGGTCTACATCAATGGCAAGCCCCAGCAGATCCACGAGAAGTACGCCGTCGAAATGTACACCAATGATGATGGTGGCGATCAGCCGCTGATCCGCGTCTATGCCCTGCCTGGCAACGAGCTGGAGATCAGCTTCCGCGATGACGACATCAAGATCGTGTTCGACGGATACCGTGCCCGTTTCTTCGCCGACCAGTCGTACTTCAACAACTTCGTCGGTCTTTGCGGTACCAACAATGGCGAAGGAGA                                                             ]


>consensus_8273#3 CCGCGGACGCGTGGGCAGCATCTTGCGCTGTGTCGAACAAATTCGTCAACACCTTCGATG GAAAGACCTACGACTATGAGCTTGGCAACTGCTGGCATGTTGTGCTGCACACCGTCAAGC CTGACTACTATTTCTACGCCCAGGACTCGCACTTCATGAACTCGGACTACGAATACAACT GGAAGAACGGCTTCGGAGAGGATGAGCAGATCACCATCCTGGCCCGTCACGGCGAGGACA ACCAGCTCTTCTTGAAGGCTATCCTTGGCCAGTACAAGCAGAACGACTACAACATCGATA TCATCCCCCACGGACACGAGCTCCCGATGGTCTACATCAATGGCAAGCCCCAGCAGATCC ACGAGAAGTACGCCGTCGAAATGTACACCAATGATGATGGTGGCGATCAGCCGCTGATCC GCGTCTATGCCCTGCCTGGCAACGAGCTGGAGATCAGCTTCCGCGATGACGACATCAAGA TCGTGTTCGACGGATACCGTGCCCGTTTCTTCGCCGACCAGTCGTACTTCAACAACTTCG TCGGTCTTTGCGGTACCAACAATGGCGAAGGAGAGGACGACTTCATCACCCCCGACCAGT GCGTCATGCGCAAGCCTGAATACTTTGCCGCTTCG



consensusID : consensus_8273#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 430
fasta sequence
                              [TCGCCACGAGGTGTACACGCCTTTTGAGAAGGCCACCTCTCGGAATNGGGGGTGCTTTTGGGGATGTGACTCGCTCTTTGGCTGCCACCAAAGGAGTTCTGCGGACACGTGTAGCGATGCGGGAAGCTCTACCGAGTCGCCGGCCTATAAAAGATGGGAGATCACACGGAAGTCATCGAAATTGACTTATGATCCTCAAACGATCCAGTTACATCGATCTGCTGGATTTTGTTTTGGAACAAGCCACGAGTACGGTCTGAACCACTCGGCATGAAGGCGCGCAGTACATGTCGCTGAATTTTTGGTATCCAGTAAGCGAGCAAACAACCGGCACAATTTGCCGGGAAGCCGAGCCGGGCCAGAGGAAGCAGGTTGGAAGCAGTGCTCCGTGGAGACCAGATCCATACACCGAAATTGCACCACGNCCGAG]

[+] EMBL BX469387             [TCGCCACGAGGTGTACACGCCTTTTGAGAAGGCCACCTCTCGGAATNGGGGGTGCTTTTGGGGATGTGACTCGCTCTTTGGCTGCCACCAAAGGAGTTCTGCGGACACGTGTAGCGATGCGGGAAGCTCTACCGAGTCGCCGGCCTATAAAAGATGGGAGATCACACGGAAGTCATCGAAATTGACTTATGATCCTCAAACGATCCAGTTACATCGATCTGCTGGATTTTGTTTTGGAACAAGCCACGAGTACGGTCTGAACCACTCGGCATGAAGGCGCGCAGTACATGTCGCTGAATTTTTGGTATCCAGTAAGCGAGCAAACAACCGGCACAATTTGCCGGGAAGCCGAGCCGGGCCAGAGGAAGCAGGTTGGAAGCAGTGCTCCGTGGAGACCAGATCCATACACCGAAATTGCACCACGNCCGAG]


>consensus_8273#4 TCGCCACGAGGTGTACACGCCTTTTGAGAAGGCCACCTCTCGGAATNGGGGGTGCTTTTG GGGATGTGACTCGCTCTTTGGCTGCCACCAAAGGAGTTCTGCGGACACGTGTAGCGATGC GGGAAGCTCTACCGAGTCGCCGGCCTATAAAAGATGGGAGATCACACGGAAGTCATCGAA ATTGACTTATGATCCTCAAACGATCCAGTTACATCGATCTGCTGGATTTTGTTTTGGAAC AAGCCACGAGTACGGTCTGAACCACTCGGCATGAAGGCGCGCAGTACATGTCGCTGAATT TTTGGTATCCAGTAAGCGAGCAAACAACCGGCACAATTTGCCGGGAAGCCGAGCCGGGCC AGAGGAAGCAGGTTGGAAGCAGTGCTCCGTGGAGACCAGATCCATACACCGAAATTGCAC CACGNCCGAG



consensusID : consensus_8273#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 355
fasta sequence
                              [CGACCCACGCGTCCGGCCGCAGCTGCGTGATCTGTACATCACCCGCGCGCGTGAGGTCGAGTTCAACAACAAGAAGGCGATCATCATCTACGTGCCGGGGGCGAAACAGAAGGCCTTCCAGAAGGTACAGACCCGTCTGGTGCGCGAGTTGGAGAAGAAGTTCTCCGGCAAGCACGTCGTGTTCATTGCCGAGCGCCGCATTCTGCCCAAACCGATGCGTGGACGCCGCGACCCCAACAAGCAGAAGAGACCGCGTTCCCGAACGCTCACCGCCGTGTACGATGCCATCCTGGAGGATCTGGTATTCCCGGCGGAGGTGGTCGGCAAGCGTATCCGCGTCAAGCTCGACGGATCC]

[+] EMBL BM637447             [CGACCCACGCGTCCGGCCGCAGCTGCGTGATCTGTACATCACCCGCGCGCGTGAGGTCGAGTTCAACAACAAGAAGGCGATCATCATCTACGTGCCGGGGGCGAAACAGAAGGCCTTCCAGAAGGTACAGACCCGTCTGGTGCGCGAGTTGGAGAAGAAGTTCTCCGGCAAGCACGTCGTGTTCATTGCCGAGCGCCGCATTCTGCCCAAACCGATGCGTGGACGCCGCGACCCCAACAAGCAGAAGAGACCGCGTTCCCGAACGCTCACCGCCGTGTACGATGCCATCCTGGAGGATCTGGTATTCCCGGCGGAGGTGGTCGGCAAGCGTATCCGCGTCAAGCTCGACGGATCC]


>consensus_8273#5 CGACCCACGCGTCCGGCCGCAGCTGCGTGATCTGTACATCACCCGCGCGCGTGAGGTCGA GTTCAACAACAAGAAGGCGATCATCATCTACGTGCCGGGGGCGAAACAGAAGGCCTTCCA GAAGGTACAGACCCGTCTGGTGCGCGAGTTGGAGAAGAAGTTCTCCGGCAAGCACGTCGT GTTCATTGCCGAGCGCCGCATTCTGCCCAAACCGATGCGTGGACGCCGCGACCCCAACAA GCAGAAGAGACCGCGTTCCCGAACGCTCACCGCCGTGTACGATGCCATCCTGGAGGATCT GGTATTCCCGGCGGAGGTGGTCGGCAAGCGTATCCGCGTCAAGCTCGACGGATCC



consensusID : consensus_8273#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 207
fasta sequence
                              [TTTCGATGCCTGGACGCAGGGATCCGGGAACATGTCGGTGGCGGACAAGGTCCCACCAGAGATGCTCCACATGGGGCATCCCCACTGGAACCAGATCCCGCCCATGAACCCGCTGCGACACTCGATCCTAGGTTTTGCCATCTTCATGCTCGGAATGATCTCGATGACCGGGAACGGCTGTGTGATGTACATCTTCACCAACACCAA]

[+] EMBL BM631668             [TTTCGATGCCTGGACGCAGGGATCCGGGAACATGTCGGTGGCGGACAAGGTCCCACCAGAGATGCTCCACATGGGGCATCCCCACTGGAACCAGATCCCGCCCATGAACCCGCTGCGACACTCGATCCTAGGTTTTGCCATCTTCATGCTCGGAATGATCTCGATGACCGGGAACGGCTGTGTGATGTACATCTTCACCAACACCAA]


>consensus_8273#6 TTTCGATGCCTGGACGCAGGGATCCGGGAACATGTCGGTGGCGGACAAGGTCCCACCAGA GATGCTCCACATGGGGCATCCCCACTGGAACCAGATCCCGCCCATGAACCCGCTGCGACA CTCGATCCTAGGTTTTGCCATCTTCATGCTCGGAATGATCTCGATGACCGGGAACGGCTG TGTGATGTACATCTTCACCAACACCAA



consensusID : consensus_8273#7
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 86
fasta sequence
                              [ACGAAAACGGCCGTAGCACCGAACGAACGCGACAAGCAGCCGCCCCAGGCCCAGGCTGCCTCCAAGCAGATCGCCGTCGACAAGCA]

[+] EMBL CNS08XSP             [ACGAAAACGGCCGTAGCACCGAACGAACGCGACAAGCAGCCGCCCCAGGCCCAGGCTGCCTCCAAGCAGATCGCCGTCGACAAGCA]


>consensus_8273#7 ACGAAAACGGCCGTAGCACCGAACGAACGCGACAAGCAGCCGCCCCAGGCCCAGGCTGCC TCCAAGCAGATCGCCGTCGACAAGCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8273#0      ACAGTGGTAATTGACTTCGTGGGTGCTTTCAAGTTCGGTCTGTATGAGGTGTTCAAAATC 60
consensus_8273#7      ------------------------------------------------------------
consensus_8273#4      ------------------------------------------------------------
consensus_8273#5      ------------------------------------------------------------
consensus_8273#6      ------------------------------------------------------------
consensus_8273#2      ------------------------------------------------------------
consensus_8273#1      ------------------------------------------------------------
consensus_8273#3      ------------------------------------------------------------
                                                                                  

consensus_8273#0      AAGTACGCTGACATGATCGGCGAGGAGAATGCCTACCTGTACCGTACCTGGGTGTATCTG 120
consensus_8273#7      ------------------------------------------------------------
consensus_8273#4      ------------------------------------------------------------
consensus_8273#5      ------------------------------------------------------------
consensus_8273#6      ------------------------------------------------------------
consensus_8273#2      ---GAGAAAGCTCACCCTGTCTGCGCTCCATTTGTGTTCCACAATTTCGCACAAAAAGCA 57
consensus_8273#1      ----CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTGATGTTGCTACAGCA 56
consensus_8273#3      ---------------------------------------CCGCGGACGCGTGGGCAGCAT 21
                                                                                  

consensus_8273#0      GGCGCTTCCGCCTCGGCCGAATTCTTCGCCGACATTGCGCTGGCCCCGCTGGAGGCGGCC 180
consensus_8273#7      ------------------------------------------------------------
consensus_8273#4      -------------------------------------------TCGCCACGAGGTGTACA 17
consensus_8273#5      ------------------------------------------------------------
consensus_8273#6      ------------------------------------------------------------
consensus_8273#2      CCAGCACAGCACCGGCATCCTGCAAAATGTCGCTAAATCTTGGTGATCCTTTCCCCAACT 117
consensus_8273#1      ACCGCAGCATCCGCCACAGCAGAAACAGAACCATCTTGAACAGCAACGGACAGCGAAGGC 116
consensus_8273#3      CTTGCGCTGTGTCGAACAAATTCGTCAACACCTTCGATGGAAAGACCTACGACTATGAGC 81
                                                                                  

consensus_8273#0      AAGGTCAAGATCCAGACCATGCCCGGATACGCCAACACGATGCGACAGGCCATGCCGAAG 240
consensus_8273#7      ------------------------------------------------------------
consensus_8273#4      CGCCTTTTGAGAAGGCCACCTCTCGGAATNGGGGGTGCTTTTGGGGATGTGACTCGCTCT 77
consensus_8273#5      -------------------------------------------------CGACCCACGCG 11
consensus_8273#6      ------------------------------------------------------------
consensus_8273#2      TTACCGCCGAAACCACTATCGGGCCGATCGATTTCCACCAGTGGATCGGCGACGGCTGGG 177
consensus_8273#1      ACAGCAGCAGCAGCAGCAGCAGCAACAACAGTTGGCCGCGTTGTTCCGACAAGCCAGTGG 176
consensus_8273#3      TTGGCAACTGCTGGCATGTTGTGCTGCACACCGTCAAGCCTGACTACTATTTCTACGCCC 141
                                                                                  

consensus_8273#0      ATGATGGGCGAGGAGGGCGTTATGGCGTTCTACAAGGGGCTG-GTTCCGCTGTGGTGCCG 299
consensus_8273#7      ------------------------------------------------------------
consensus_8273#4      TTGGCTGCCACCAAAGGAGTTCTGCGGACACGTGTAGCGATGCGGGAAGCTCTACCGAGT 137
consensus_8273#5      TCCGGCCGCAGCTGCGTGATCTGTACATCACCCGCGCGCGTGAGGTCGAGTTCAACAACA 71
consensus_8273#6      ------------------------------------------------------------
consensus_8273#2      CAATCCTGTTTTCGCACCCCGCCGACTACACGCCCGTCTGCACGACGGAACTGGCGGCGG 237
consensus_8273#1      TGGTGCGGTGGACG-GTAGCCCGGTTCTAGCGAAAGTGGATGTGACGAACAGTGATGCAG 235
consensus_8273#3      AGGACTCGCACTTCATGAACTCGGACTACGAATACAACTGGAAGAACGGCTTCGGAGAGG 201
                                                                                  

consensus_8273#0      TCAGATCCCGTACACCATGATGAAGTTCGCCTGCTTCGAGAAGACCGTCGAGCTGTTGTA 359
consensus_8273#7      ------------------------------------------------------------
consensus_8273#4      CGCCGGCCTATAAAAGATGGGAGATCACACGGAAGTCATCGAAATTGACTTATGATCCTC 197
consensus_8273#5      AGAAGGCGATCATCATCTACGTGCCGGGGGCGAAAC--AGAAGGCCTTCCAGAAGGTACA 129
consensus_8273#6      ------------------------------------------------------------
consensus_8273#2      TGGCTAAGCTGGTGCCCGAGTTCACCAAGCGCAACGTGAAACCGATTGCCCTGTCGTGCG 297
consensus_8273#1      CTAGTGCGCTGCTGTTGGGCGGCAAGCAGGACAATC-GAAAGGGACGGACCGTGCAGGCG 294
consensus_8273#3      ATGAGCAGATCACCATCCTGGCCCGTCACGGCGAGGACAACCAGCTCTTCTTGAAGGCTA 261
                                                                                  

consensus_8273#0      CAAGCATGTCGTGCCGAAGCCACGCGACCAGTGCTCGAATGGTGAGCAGCTGATTGTGAC 419
consensus_8273#7      ------------------------------------------------------------
consensus_8273#4      AAACGATCCAGTTACATCGATCTGCTGGATTTTGTTTTGGAACAAGCCACGAGTACGGTC 257
consensus_8273#5      GACCCGTCTGGTGCGCGAGTTGGAGAAGAAGTTCTCCGGCAA-GCACGTCGTGTTCATTG 188
consensus_8273#6      ------------TTTCGATGCCTGGACGCAGGGATCCGGGAACATGTCGGTGGCGGACAA 48
consensus_8273#2      ATTCGGTCGAGTCGCACCGTGGCTGGATCGAGGACATCAAAGCGTACGGCCAGCTGGCGC 357
consensus_8273#1      AACGGGGCACCGGGAGCAAATGTAACGCTGGGCATACCGACGGGTGTGAGCGGGCCAGTG 354
consensus_8273#3      TCCTTGGCCAGT--ACAAGCAGAACGACTACAACATCGATATCATCCCCCACGGACACGA 319
                                                                                  

consensus_8273#0      GTTCGCTGCCGGCTACATTGCCGGTGTGT-----TCTGTGCCGTGGTGTCCCATCCGGCC 474
consensus_8273#7      ---------------------------------------------------------ACG 3
consensus_8273#4      TGAACCACTCGGCATGAAGGCGCGCAGTA-----CATGTCGCTGAATTTTTGGTATCCAG 312
consensus_8273#5      CCGAGCGCCGCATTCTGCCCAAACCGATG-----CGTGGACGCCGCGACCCCAACAAGCA 243
consensus_8273#6      GGTCCCACCAGA-GATGCTCCACATGGGG-----CATCCCCACTGGAACCAGATCCCGCC 102
consensus_8273#2      GGCCGACCCATTTCCCTTCCCGATCATTGACGATTCGAAGCGCGAGTGGGCGGTCAAGCT 417
consensus_8273#1      AGTGCGGGCGTACTAGAGCCTTGTCCGTT-----CGATTTCGACAGTGACAGTTTGGACG 409
consensus_8273#3      GCTCCCGATGGTCTACATCAATGGCAAGCCCCAGCAGATCCACGAGAAGTACGCCGTCGA 379
                                                                                  

consensus_8273#0      GATG--TGGTGGTGTCCAAGCTGA--ACCAGGCCAAGGGATCGTCCGCGATC----GATG 526
consensus_8273#7      AAAA--CGGCCGTAGCACCGAACG--AACGCGACAAGCAGCCGCCCCAGGCC----CAGG 55
consensus_8273#4      TAAG--CGAGCAAACAACCGGCAC--AATTTGCCGGGAAGCCGAGCCGGGCCAGAGGAAG 368
consensus_8273#5      GAAG--AGACCGCGTTCCCGAACG--CTCACCGCCGTGTACGATGCCATCCTGGAGGATC 299
consensus_8273#6      CATG--AACCCGCTGCGACACTCG--ATCCTAGGTTTTGCCATCTTCATGCTCGGAATGA 158
consensus_8273#2      GAAC--ATGCTGGACCGGGACGAG--ATAGGATCGGCTGGTCTTCCCCTAACCTGCCGGG 473
consensus_8273#1      AAGC--GTGCCGGAGCTTGATCCGGGATATGAACGAGTACGGTGTCTGTGTGCTGGACAA 467
consensus_8273#3      AATGTACACCAATGATGATGGTGGCGATCAGCCGCTGATCCGCGTCTATGCCCTGCCTGG 439
                       *                                                          

consensus_8273#0      TGGCC--AAGCAGCTGGGCTTCATGGGCATGTGGAACGGTCTGACGCCGCGTATCATCAT 584
consensus_8273#7      CTGCC--TCCAAGCAGATCGCCGTCGACAAGCA--------------------------- 86
consensus_8273#4      CAGGT--TGGAAGCAGTGCTCCGTGGAGACCAGATCCATACACCGAAATTGCACCACGNC 426
consensus_8273#5      TGGTA--TTCCCGGCGGAGGTGGTCGGCAAGCGTATCCGCGTCAAGCTCGACGGATCC-- 355
consensus_8273#6      TCTCG--ATGACCGGGAACGGCTGTGTGATGTACATCTTCACCAACACCAA--------- 207
consensus_8273#2      CTGTG--TTTGTGATCGATGCGGGCAAAAAGCTGCGCCTGTCCATCCTCTACCCAGCGAC 531
consensus_8273#1      TTTCC--TTGGCCAGGAGCGGGGCCAGCAAGTGCTGGACGAGGTGACCGGAATGTATTCG 525
consensus_8273#3      CAACGAGCTGGAGATCAGCTTCCGCGATGACGACATCAAGATCGTGTTCGACGGATACCG 499
                                                                                  

consensus_8273#0      GATCGGTACGCTGACCGCCCTGCAGTGGTTCATCTACGACGGTGTGAAGGTTGCCCTCTC 644
consensus_8273#7      ------------------------------------------------------------
consensus_8273#4      CGAG-------------------------------------------------------- 430
consensus_8273#5      ------------------------------------------------------------
consensus_8273#6      ------------------------------------------------------------
consensus_8273#2      GACCGGGCGCAACTTTGCCGAAATTCTGCGCACCATCGACTCGATGCAGCTGACGGAAAA 591
consensus_8273#1      TCTGGAGTGTTTCGGGACGGCCAGCTAGTGTCGAACCGAGGCGCTAACAATTTACGCCAT 585
consensus_8273#3      TGCCCGTTTCTTCGCCGACCAGTCGTACTTCAACAACTTCGTCGGTCTTTGCGGTACCAA 559
                                                                                  

consensus_8273#0      CATCCCCCGCCCACCCCCGCCAGAGATGCCGGAGTCGCTGAAGAAGAAGCTGAACGTAGA 704
consensus_8273#7      ------------------------------------------------------------
consensus_8273#4      ------------------------------------------------------------
consensus_8273#5      ------------------------------------------------------------
consensus_8273#6      ------------------------------------------------------------
consensus_8273#2      ACGTCGGGTGGCAACGCAAGCCGATTGGATGCCGGGCGATAGCTGCATGGTACAGCCGAC 651
consensus_8273#1      ATACGAGGAGACAAAATCACGTGGATAGGCGGCAAGGAACCGGGATGCAGCAGTATCGGC 645
consensus_8273#3      CAATGGCGAAGGAGAGGACGACTTCATCACCCCCGACCAGTGCGTCATGCGCAAGCCTGA 619
                                                                                  

consensus_8273#0      GTAATTCTAGCGCCACGGATGAAAGGAAGTCGAAGCATTTGTTTGTGATGATGGTGTGCA 764
consensus_8273#7      ------------------------------------------------------------
consensus_8273#4      ------------------------------------------------------------
consensus_8273#5      ------------------------------------------------------------
consensus_8273#6      ------------------------------------------------------------
consensus_8273#2      GGTTC------------------------------------------------------- 656
consensus_8273#1      TACCTTATCAATTGTGTGGATGCAGTGATTACCAACTGCAAACGGATGGAGAACAAC--- 702
consensus_8273#3      ATACTTTGCCGCTTCG-------------------------------------------- 635
                                                                                  

consensus_8273#0      GC 766
consensus_8273#7      --
consensus_8273#4      --
consensus_8273#5      --
consensus_8273#6      --
consensus_8273#2      --
consensus_8273#1      --
consensus_8273#3      --
                        




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)