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Anopheles gambiae
cluster # 8308 cluster # 8308       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8308#0 length = 1502 sequences # 7  
consensus_8308#1 length = 691 sequences # 1  
consensus_8308#2 length = 587 sequences # 1  
consensus_8308#3 length = 341 sequences # 1  

consensusID : consensus_8308#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1502
fasta sequence
                              [CCCGGCTCTGGCGACCGGAACGCGCGCTGGTCCAGTGTCTGAGTGTCGGTGGAACGTTTGTTAAAAAGCTCGCGAGTGCTCCCACCCTCGTTGTTTGTCGAATGCGTTTTGTGGGTCGCAATAACGGAGGTGGAATAATAGTACGAAAAGGGAACGTAAAGGGAAACAAAATAGTGCCAAACAGCAAGTGCGAACGCCGCGCTGTGTCCGCGTGTGTACTCTTCTGACCCTTCGTGTGTGTGTGTGGTTTGCTGGTGTATCGTGCTGCAAAAGGTGTACAGCGAAAAAACAAAAAAATAATTCGTTCTGAAAGATCAACTCAAGGATAAGGAGTTTCCTTCACCATGCTACCTCTACTTTGCTTGGCACTCGTGCTGAGCACGCTAGTGCCATCGTACGGATTGCCGAACGGTGCGCCAACGTCGGTCTGCGACAACATGCTGCCGTTCCACGGTGGAGGCATCCCACCGCTCACCACCAAGACGCCGTTCCTGATCACGCCCCAAACGTCGGTGGTCGGTAGCGGGCAGATGCTCAAGATCGATATCGAGTCCTTCCCCGCCAACATTGTGTTCAAGGGCTACATGATACAGGCCCGTGCTGCCGACCCGCCGAACAACATTGTCGGCCGGTTTGTCGACTCGGATGCGAGCGCGATCAAGCTGATCGATTGTCAGGCCGGAGGAGATACGGCCACACACACCAACACCAGCCCGAAGCAGGAGCTGACGCTTGAGTGGACCGCTCCGG-ACAACTTCGTTGGCGATGTGATCTTCAACGCTACGATCGCGCAGGACTACGACAAGTTCTGGGTTGGCATTCCGTCGGAGCGGGTGCGCGTGGTAGCTAGCTCGACGACGGTGGCGCCCGGTACGGCGCCGACCAAGCGCCCAACCACGACGACAACCGTGCCACCTTACCGGCCGGCACAAACAGAAGCGCCGGTAGCGGCCGACCCGATCTACGAGGAGTGTGGACAGAGCAAGGGATGCTTCGGATTTCCGGAGGGATGTGTCGATAGCAAGAACTGCCGGGCGGTGGTCACGATCGCGGTGCTGGGAGCGCGTTACGTATTTGAAATGAAGGCAGGATACAATCGTCCTGCTTACGTTG-CTTCGGACTGTCCAGTGACGCCAAGATGGGTGAAGACTCCGTGATTGAATGTGTCCCGGAACAGGGTACGGTAAACGCTTACGCCTCGTGGACCACGGTTGGTCCATATGGATCTACACGTTTGGGAGTGCCGCAAAACATCTTCCAAGTGCTGGAGAAGTCGTACAAT-ATGGTGTGATTTACTGCAAAGTGGAACGCGACGCTGTCAGCACGGTCAAGGGCCAGAAGTTTGATCTGCTGAACGATAAGTTCCATCTGCTGCTTGCGGCCGGATCATCGGTGGAATCAACCAACGTCAACTATCACGACATCGGCCGTCACGTGTCGGGCAGCCCGCAGTCACTGGCGGAGGTTGGCCCGGTGCAGGGATCTTCGAAGCTGTTTCCGCC]

[+] EMBL BM614626             [ CCGGCTCTGGCGACCGGAACGCGCGCTGGTCCAGTGTCTGAGTGTCGGTGGAACGTTTGTTAAAAAGCTCGCGAGTGCTCCCACCCTCGTTGTTTGTCGAATGCGTTTTGTGGGTCGCAATAACGGAGGTGGAATAATAGTACGAAAAGGGAACGTAAAGGGAAACAAAATAGTGCCAAACAGCAAGTGCGAACGCCGCGCTGTGTCCGCGTGTGTACTCTTCTGACCCTTCGTGTGTGTGTGTGGTTTGCTGGTGTATCGTGCTGCAAAAGGTGTACAGCGAAAAAACAAAAAAATAATTCGTTCTGAAAGATCAACTCAAGGATAAGGAGTTTCCTTCACCATGCTACCTCTACTTTGCTTGGCACTCGTGCTGAGCACGCTAGTGCCATCGTACGGATTGCCGAACGGTGCGCCAACGTCGGTCTGCGACAACATGCTGCCGTTCCACGGTGGAGGCATCCCACCGCTCACCACCAAGACGCCGTTCCTGATCACGCCCCAAACGTCGGTGGTCGGTAGCGGGCAGATGCTCAAGATCGATATCGAGTCCTTCCCCGCCAACATTGTGTTCAAGGGCTACATGATACAGGCCCGTGCTGCCGACCCGCCGAACAACATTGTCGGCCGGTTTGTCGACTCGGATGCGAGCGCGATCAAGCTGATCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS08JUH             [caggagcCTGGCGA CGGAACGCGCGCTGGTCCAGTGTCTGAGTGTCGGTGGAACGTTTGTTAAAAAGCTCGCGAGTGCTCCCACCCTCGTTGTTTGTCGAATGCGTTTTGTGGGTCGCAATAACGGAGGTGGAATAATAGTACGAAAAGGGAACGTAAAGGGAAACAAAATAGTGCCAAACAGCAAGTGCGAACGCCGCGCTGTGTCCGCGTGTGTACTCTTCTGACCCTTC  GTGTGTGTGTGGTTTGCTGGTGTATCGTGCTGCAAAAGGTGTACAGTGAAAAAACAAAAAAATAATTCGTTCTGAAAGATCAACTCAAGGATAAGGAGTTTCCTTCACCATGCTACCTCTACTTTGCTTGGCACTCGTGCTGAGCACGCTAGT CCATCGTACGGATTGCCGAACGGTGCGCCAACGTCGGTCTGCGACAACATGCTGCCGTTCCACGGTGGAGGCATCCCACCGCTCACCACCAAGACGCCGTTCCTGATCACGCCCCAAACGTCGGTGGTCGGTAGCGGGCAGATGCTCAAGATCGATATCGAGTCCTTCCCCGCCAACATTGTGTTCAAGGGCTACATGATACAGGCCCGTGCTGCCGACCCGCCGAACAACATTGTCGGCCGGTTTGTCGACTCGGATGCGAGCGCGATCAAGCTGATTTTTTTTCAGGCCGGAGGAGATACGGCCACACACACCAACACCAGCCCGAAGCAGGAGCTGACGCTTGAGTGGACCGCTCCGG ACAACTTCGTTGGCGATGTGATCTTCAACGCTACGATCGCGCAGGACTACGACAAGTTCTGGGTTGGCATTCCGTCGGAGCGGGTGCGCGTGGTAGCTAGCTCGACGACGGTGGCGCCCGGTAC GCGCGGACCAAGCGCCCAACCACGACGACAACCGTGCCACCTTACCGGCCGGCACAAACAGAAGCGCCGGTAGCGGCCGACCCGATCTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM642129             [                                                                                                                                                                                                                                                                                                                                                                                                                          ccgGCGCCAACGTCGGTCTGCGACAACATGCTGCCGTTCCACGGTGGAGGCATCCCACCGCTCACCACCAAGACGCCGTTCCTGATCACGCCCCAAACGTCGGTGGTCGGTAGCGGGCAGATGCTCAAGATCGATATCGAATCCTTCCCCGCCAACATTGTGTTCAAGGGCTACATGATACAGGCCCGTGCTGCCGACCCGCCGAACAACATTGTCGGCCGGTTTGTCGACTCGGATGCGAGCGCGATCAAGCTGATCGACTGTCAGGCCGGAGGCGATACGGCCACACACACCAACACCAGTCCGAAGCAGGAGCTGACGCTTGAGTGGACCGCTCCGG ACAACTTCGTTGGCGATGTGATCTTCAACGCTACGATCGCGCAGGACTACGACAAGTTCTGGGTTGGCATTCCGTCGGAGCGGGTGCGCGTGGTAGCTAGCTCGACGACGGTGGCGCCCGGTACGGCGCCGACCAAGCGCCCAACCACGACGACAACCGTGCCACCTTACCGGCCGGCACAAACAGAAGCGCCGGTAGCGGCCGACCCGATCTACGAGGAGTGCGGACAGAGCAAGGGATGCTTCGGATTTCCGGAGGGATGCGTCGATAGCAAGAACTGCCGGGCGGTGGTCACTATCGCGGTGCTGGGAGCGCGTTACGTATTTGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CNS08JUI             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGTCAGGCCGGAGGAGATACGGCCACAAAAACCAACACCAGCCCGAAGCAGGGGGTGACGCTTGAGTGGACCGCTCCGGAACAA TTCGTTGGCGATGTGATCTTCAACGCTACGATCGCGCAGGACTACGACAAGTTCTGGGTTGGCATTCCGTCGGAGCGGGTGCGCGTGGTAGCTAGCTCGACGACGGTGGCGCCCGGTACGGCGCCGACCAAGCGCCCAACCACGACGAAAACCGTGCCACCTTACCGGCCGGCACAAACAGAAGCGCCGGTAGCGGCCGACCCGATCTACGAGGAGTGTGGACAGAGCAAGGGATGCTTCGGATTTCCGGAGGGATGTGTCGATAGCAAGAACTGCCGGGCGGTGGTCACGATCGCGGTGCTGGGAGCGCGTTACGTATTTGAAATGAAGGCAGGATACAATCGTCCTGCTTACGTTG CTTCGGACTGTCCAGTGACGCCAAGATGGGTGAAGACTCCGTGATTGAATGTGTCCCGGAACAGGGTACG                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS09DCH             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AAGTTCCGGGTTGGCATTCCGTCGGAGCGGGT CGCGTGGTAGCTAGCTCGACGACGGTGGCGCCCGGTAC GCGCGTACCAAGCGCCCAACCACGACGACAACCGTGCCACCTTACCGGCCGGCACAAACAGAAGCGCCGGTAGCGGCCGACCCGATCTACGAGGAGTGTGGACAGAGCAAGGGATGCTTCGGATTTCCGGAGGGATGTGTCGATAGCAAGAACTGCCGGGCGGTGGTCACGATCGCGGTGCTGGGAGCGCGTTACGTATTTGAAATGAAGGCAGGATACAATCGTCCTGCTTACGTTGCCTTCGGACTGTCCAGTGACGCCAAGATGGGTGAAGACTCCGTGATTGAATGTGTCCCGGAACAGGGTACGGTAAACGCTTACGCCTCGTGG                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM615746             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ccgTGGCATTCCGTCGGAGCGGGTGCGCGTGGTAGCTAGCTCGACGACGGTGGCGCCCGGTACGGCGCCGACCAAGCGCCCAACCACGACGACAACCGTGCCACCTTACCGGCCGGCACAAACAGAAGCGCCGGTAGCGGCCGACCCGATCTACGAGGAGTGCGGACAGAGCAAGGGATGCTTCGGATTTCCGGAGGGATGCGTCGATAGCAAGAACTGCCGGGCGGTGGTCACGATCGCGGTGCTGGGAGCGCGTTACGTATTTGAAATGAAGGCAGGATACAATCGTCCTGCTTACGTTGCCTTCGGACTGTCCAGTGACGCCAAGATGGGTGAAGACTCCGTGATTGAATGTGTCCCGGAACAGGGTACGGTAAACGCTTACGCCTCGTGGACCACGGTTGGTCCATATGGATCTACACGTTTGGGAGTGCCGCAAAACATCTTCCAAGTGCTGGAGAAGTCGTACAATGATGGTGTGATTTACTGCAAAGTGGAACGCGACGCTGTCAGCACGGTCAAGGGCCAGAAGTTTGATCTGCTGAACGATAAGTTCCATCTGCTGCTTGCGGCCGGATCATCGGTGGAATCAACCAACGTCAACTATCACGACATCGGCCGTCACGTGTCGGGCAGCCCGCAGTCACTGGCGGAGGT                                    ]
[-] EMBL CNS09DCI             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAAGCGCCCAACCACGACGACAACCGTGCCACCTTACCGGCCGGCACAAACAGAAGCGCCGGTAGCGGCCGACCCGATCTACGAGGAGTGTGGACAGAGCAAGGGATGCTTCGGATTTCCGGAGGGATGTGTCGATAGCAAGAACTGCCGGGCGGTGGTCACGATCGCGGTGCTGGGAGCGCGTTACGTATTTGAAATGAAGGCAGGATACAATCGTCCTGCTTACGTTG CTTCGGACTGTCCAGTGACGCCAAGATGGGTGAAGACTCCGTGATTGAATGTGTCCCGGAACAGGGTACGGTAAACGCTTACGCCTCGTGGACCACGGTTGGTCCATATGGATCCACACGTTTGGGAGTGCCACAAAACATCTTCCAAGTACTGGAGAAGTCGTACAAT ATGGTGTGATTTACTGCAAAGTGGAACGCGACGCTGTCAGCACGGTCAAGGGCCAGAAGTTTGATCTGCTGAACGATAAGTTCCATCTGCTGCTTGCTGCCGGATCATCGGTGGAATCAACCAACGTCAACTATCACGACATCGGCCGTCACGTGTCGGGCAGCCCGCAGTCACTGGCGGAGGTTGGCCCGGTGCAGGGATCTTCGAAGCTGTTTCCGCC]


>consensus_8308#0 CCCGGCTCTGGCGACCGGAACGCGCGCTGGTCCAGTGTCTGAGTGTCGGTGGAACGTTTG TTAAAAAGCTCGCGAGTGCTCCCACCCTCGTTGTTTGTCGAATGCGTTTTGTGGGTCGCA ATAACGGAGGTGGAATAATAGTACGAAAAGGGAACGTAAAGGGAAACAAAATAGTGCCAA ACAGCAAGTGCGAACGCCGCGCTGTGTCCGCGTGTGTACTCTTCTGACCCTTCGTGTGTG TGTGTGGTTTGCTGGTGTATCGTGCTGCAAAAGGTGTACAGCGAAAAAACAAAAAAATAA TTCGTTCTGAAAGATCAACTCAAGGATAAGGAGTTTCCTTCACCATGCTACCTCTACTTT GCTTGGCACTCGTGCTGAGCACGCTAGTGCCATCGTACGGATTGCCGAACGGTGCGCCAA CGTCGGTCTGCGACAACATGCTGCCGTTCCACGGTGGAGGCATCCCACCGCTCACCACCA AGACGCCGTTCCTGATCACGCCCCAAACGTCGGTGGTCGGTAGCGGGCAGATGCTCAAGA TCGATATCGAGTCCTTCCCCGCCAACATTGTGTTCAAGGGCTACATGATACAGGCCCGTG CTGCCGACCCGCCGAACAACATTGTCGGCCGGTTTGTCGACTCGGATGCGAGCGCGATCA AGCTGATCGATTGTCAGGCCGGAGGAGATACGGCCACACACACCAACACCAGCCCGAAGC AGGAGCTGACGCTTGAGTGGACCGCTCCGGACAACTTCGTTGGCGATGTGATCTTCAACG CTACGATCGCGCAGGACTACGACAAGTTCTGGGTTGGCATTCCGTCGGAGCGGGTGCGCG TGGTAGCTAGCTCGACGACGGTGGCGCCCGGTACGGCGCCGACCAAGCGCCCAACCACGA CGACAACCGTGCCACCTTACCGGCCGGCACAAACAGAAGCGCCGGTAGCGGCCGACCCGA TCTACGAGGAGTGTGGACAGAGCAAGGGATGCTTCGGATTTCCGGAGGGATGTGTCGATA GCAAGAACTGCCGGGCGGTGGTCACGATCGCGGTGCTGGGAGCGCGTTACGTATTTGAAA TGAAGGCAGGATACAATCGTCCTGCTTACGTTGCTTCGGACTGTCCAGTGACGCCAAGAT GGGTGAAGACTCCGTGATTGAATGTGTCCCGGAACAGGGTACGGTAAACGCTTACGCCTC GTGGACCACGGTTGGTCCATATGGATCTACACGTTTGGGAGTGCCGCAAAACATCTTCCA AGTGCTGGAGAAGTCGTACAATATGGTGTGATTTACTGCAAAGTGGAACGCGACGCTGTC AGCACGGTCAAGGGCCAGAAGTTTGATCTGCTGAACGATAAGTTCCATCTGCTGCTTGCG GCCGGATCATCGGTGGAATCAACCAACGTCAACTATCACGACATCGGCCGTCACGTGTCG GGCAGCCCGCAGTCACTGGCGGAGGTTGGCCCGGTGCAGGGATCTTCGAAGCTGTTTCCG CC



consensusID : consensus_8308#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 691
fasta sequence
                              [CCGCGGACGCGTGGGCGGACGCGTGGGTACGGCCACACACACCAACACCAGCCCGAAGCAGGAGCTGACGCTTGAGTGGACCGCTCCGGACAACTTCGTTGGCGATGTGATCTTCAACGCTACGATCGCGCAGGACTACGACAAGTTCTGGGTTGGCATTCCGTCGGAGCGGGTGCGCGTGGTCGCTAGCTCGACGACGGTGGCGCCCGGTACGGCACCGACCAAGCGCCCGACCACGACGACAACAGTGCCACCTTACCGGCCGGCACAAACAGAAGCGCCGGTAGCGGCCGACCCGATCTACGAGGAGTGCGGACAGAGCAAGGGATGCTTCGGATTTCCGGAGGGATGCGTCGATAGCAAGAACTGCCGGGCGGTGGTCACGATCGCGGTGCTGGGAGCGCGTTACGTATTTGAAATGAAGGCAGGATACAATCGTCCTGCTTACGTTGCCTTCGGACTGTCCAGTGACGCCAAGATGGGTGAAGACTCCGTGATTGAATGTGTCCCGGAACAGGGTACGGTAAACGCTTACGCCTCGTGGACCACGGTTGGTCCATATGGATCCACACGTTTGGGAGTGCCACAAAACATCTTCCAAGTGCTGGAGAAGTCGTACAATGATGGTGTGATTTACTGCAAAGTGGAACGCGACGCTGTCAGCACGGTCAAGGGCCAGAAGTTTGATCTG]

[+] EMBL BM608054             [CCGCGGACGCGTGGGCGGACGCGTGGGTACGGCCACACACACCAACACCAGCCCGAAGCAGGAGCTGACGCTTGAGTGGACCGCTCCGGACAACTTCGTTGGCGATGTGATCTTCAACGCTACGATCGCGCAGGACTACGACAAGTTCTGGGTTGGCATTCCGTCGGAGCGGGTGCGCGTGGTCGCTAGCTCGACGACGGTGGCGCCCGGTACGGCACCGACCAAGCGCCCGACCACGACGACAACAGTGCCACCTTACCGGCCGGCACAAACAGAAGCGCCGGTAGCGGCCGACCCGATCTACGAGGAGTGCGGACAGAGCAAGGGATGCTTCGGATTTCCGGAGGGATGCGTCGATAGCAAGAACTGCCGGGCGGTGGTCACGATCGCGGTGCTGGGAGCGCGTTACGTATTTGAAATGAAGGCAGGATACAATCGTCCTGCTTACGTTGCCTTCGGACTGTCCAGTGACGCCAAGATGGGTGAAGACTCCGTGATTGAATGTGTCCCGGAACAGGGTACGGTAAACGCTTACGCCTCGTGGACCACGGTTGGTCCATATGGATCCACACGTTTGGGAGTGCCACAAAACATCTTCCAAGTGCTGGAGAAGTCGTACAATGATGGTGTGATTTACTGCAAAGTGGAACGCGACGCTGTCAGCACGGTCAAGGGCCAGAAGTTTGATCTG]


>consensus_8308#1 CCGCGGACGCGTGGGCGGACGCGTGGGTACGGCCACACACACCAACACCAGCCCGAAGCA GGAGCTGACGCTTGAGTGGACCGCTCCGGACAACTTCGTTGGCGATGTGATCTTCAACGC TACGATCGCGCAGGACTACGACAAGTTCTGGGTTGGCATTCCGTCGGAGCGGGTGCGCGT GGTCGCTAGCTCGACGACGGTGGCGCCCGGTACGGCACCGACCAAGCGCCCGACCACGAC GACAACAGTGCCACCTTACCGGCCGGCACAAACAGAAGCGCCGGTAGCGGCCGACCCGAT CTACGAGGAGTGCGGACAGAGCAAGGGATGCTTCGGATTTCCGGAGGGATGCGTCGATAG CAAGAACTGCCGGGCGGTGGTCACGATCGCGGTGCTGGGAGCGCGTTACGTATTTGAAAT GAAGGCAGGATACAATCGTCCTGCTTACGTTGCCTTCGGACTGTCCAGTGACGCCAAGAT GGGTGAAGACTCCGTGATTGAATGTGTCCCGGAACAGGGTACGGTAAACGCTTACGCCTC GTGGACCACGGTTGGTCCATATGGATCCACACGTTTGGGAGTGCCACAAAACATCTTCCA AGTGCTGGAGAAGTCGTACAATGATGGTGTGATTTACTGCAAAGTGGAACGCGACGCTGT CAGCACGGTCAAGGGCCAGAAGTTTGATCTG



consensusID : consensus_8308#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 587
fasta sequence
                              [CCGGCTCTGGCGACCGGAACGCGCGCTGGTCCAGTGTCTGAGTGTCGTTGGAACGTTTGTTAAAAAGCTCGCGAGTGCTCCCACCCTCGTTGTCTGTCGAATGCGTTTTGTGGGTCGCAATAACGGAGGTGGAATAATAGTACGAAAAGGGAACGTAAAGAGAAACAAAATAGTGCCAAACAGCAAGTGCGAACGCCGCGCTGTGTCCGCGTGTGTACTCTTCTGACCCTTCGTGTGTGTGTGTGGTTTGCTGGTGTATCGTGCTGCAAAAGGTGTACGGCAAACAAAAAAAAAAAACAAAAAAAATAATTCGTTCTGAAAGATCAACTCAAGGATAAGGGATTTCCTTCACCATGCTACCTCTACTTTGCTTGGCACTCGTGCTGAGCACGCTAGTGCCATCGTACGGATTGCCGAACGGTGCGCCAACGTCGGTCTGCGACAATATGCTTCCGTTCCACGGTGGAGGCATCCCACCGCTCACCACCAAGACGCCGTTCCTGATCACGCCCCAAAACGTCGGTGGTCGGTAGCGGGCAGATGCTCAAGATCGATATCGAGTCCTTCCCCGCCAACATTGTGTTCAA]

[+] EMBL BM635527             [CCGGCTCTGGCGACCGGAACGCGCGCTGGTCCAGTGTCTGAGTGTCGTTGGAACGTTTGTTAAAAAGCTCGCGAGTGCTCCCACCCTCGTTGTCTGTCGAATGCGTTTTGTGGGTCGCAATAACGGAGGTGGAATAATAGTACGAAAAGGGAACGTAAAGAGAAACAAAATAGTGCCAAACAGCAAGTGCGAACGCCGCGCTGTGTCCGCGTGTGTACTCTTCTGACCCTTCGTGTGTGTGTGTGGTTTGCTGGTGTATCGTGCTGCAAAAGGTGTACGGCAAACAAAAAAAAAAAACAAAAAAAATAATTCGTTCTGAAAGATCAACTCAAGGATAAGGGATTTCCTTCACCATGCTACCTCTACTTTGCTTGGCACTCGTGCTGAGCACGCTAGTGCCATCGTACGGATTGCCGAACGGTGCGCCAACGTCGGTCTGCGACAATATGCTTCCGTTCCACGGTGGAGGCATCCCACCGCTCACCACCAAGACGCCGTTCCTGATCACGCCCCAAAACGTCGGTGGTCGGTAGCGGGCAGATGCTCAAGATCGATATCGAGTCCTTCCCCGCCAACATTGTGTTCAA]


>consensus_8308#2 CCGGCTCTGGCGACCGGAACGCGCGCTGGTCCAGTGTCTGAGTGTCGTTGGAACGTTTGT TAAAAAGCTCGCGAGTGCTCCCACCCTCGTTGTCTGTCGAATGCGTTTTGTGGGTCGCAA TAACGGAGGTGGAATAATAGTACGAAAAGGGAACGTAAAGAGAAACAAAATAGTGCCAAA CAGCAAGTGCGAACGCCGCGCTGTGTCCGCGTGTGTACTCTTCTGACCCTTCGTGTGTGT GTGTGGTTTGCTGGTGTATCGTGCTGCAAAAGGTGTACGGCAAACAAAAAAAAAAAACAA AAAAAATAATTCGTTCTGAAAGATCAACTCAAGGATAAGGGATTTCCTTCACCATGCTAC CTCTACTTTGCTTGGCACTCGTGCTGAGCACGCTAGTGCCATCGTACGGATTGCCGAACG GTGCGCCAACGTCGGTCTGCGACAATATGCTTCCGTTCCACGGTGGAGGCATCCCACCGC TCACCACCAAGACGCCGTTCCTGATCACGCCCCAAAACGTCGGTGGTCGGTAGCGGGCAG ATGCTCAAGATCGATATCGAGTCCTTCCCCGCCAACATTGTGTTCAA



consensusID : consensus_8308#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 341
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGACGTCCGGCGCGCTGGTCCAGTGTCTGAGTGTCGGTGGAACGTTTGTTAAAAAGCTCGCGAGTGCTCCCACCCTCGTTGTCTGTCAAATGCGTTTTGTGGGTCGCAATAACGGAGGTGGAATAATAGTACGAAAAGGGAACGTAAAGAGAAACAAAATAGTGCCAAACAGCAAGTGCGAACGCCGCGCTGTGTCCGCGTGTGTACTCTTCTGACCCTTCGTGTGTGTGTGTGGTTTGCTGGTGTATCGTGCTGCAAAAGGTGTACGGCAAACAAGAGAATGAAC]

[+] EMBL BM596685             [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGACGTCCGGCGCGCTGGTCCAGTGTCTGAGTGTCGGTGGAACGTTTGTTAAAAAGCTCGCGAGTGCTCCCACCCTCGTTGTCTGTCAAATGCGTTTTGTGGGTCGCAATAACGGAGGTGGAATAATAGTACGAAAAGGGAACGTAAAGAGAAACAAAATAGTGCCAAACAGCAAGTGCGAACGCCGCGCTGTGTCCGCGTGTGTACTCTTCTGACCCTTCGTGTGTGTGTGTGGTTTGCTGGTGTATCGTGCTGCAAAAGGTGTACGGCAAACAAGAGAATGAAC]


>consensus_8308#3 CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGACG TCCGGCGCGCTGGTCCAGTGTCTGAGTGTCGGTGGAACGTTTGTTAAAAAGCTCGCGAGT GCTCCCACCCTCGTTGTCTGTCAAATGCGTTTTGTGGGTCGCAATAACGGAGGTGGAATA ATAGTACGAAAAGGGAACGTAAAGAGAAACAAAATAGTGCCAAACAGCAAGTGCGAACGC CGCGCTGTGTCCGCGTGTGTACTCTTCTGACCCTTCGTGTGTGTGTGTGGTTTGCTGGTG TATCGTGCTGCAAAAGGTGTACGGCAAACAAGAGAATGAAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8308#2      ------------------------------------------------CCGGCTCTGGCG 12
consensus_8308#3      CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGACG 60
consensus_8308#0      -----------------------------------------------CCCGGCTCTGGCG 13
consensus_8308#1      CCGCGGACGCGTGGGCGGACGCGTGGGTACGGCCACACACACCAACACCAGCCCGAAGCA 60
                                                                      * * *     * 

consensus_8308#2      A---CCGGAAC----GCGCGCTGGTCCAGT--GTCTGAGTGTCGTTGGAACGTTTGTTAA 63
consensus_8308#3      T---CCGG--------CGCGCTGGTCCAGT--GTCTGAGTGTCGGTGGAACGTTTGTTAA 107
consensus_8308#0      A---CCGGAAC----GCGCGCTGGTCCAGT--GTCTGAGTGTCGGTGGAACGTTTGTTAA 64
consensus_8308#1      GGAGCTGACGCTTGAGTGGACCGCTCCGGACAACTTCGTTGGCGATGTGATCTTCAACGC 120
                          * *          *  * * *** *      *   ** ** **  *  **      

consensus_8308#2      AAAGCTCGCG-AGTGCTCCCAC-----CCTCGTTG----TCTGTCGAATGCGTTTTGTG- 112
consensus_8308#3      AAAGCTCGCG-AGTGCTCCCAC-----CCTCGTTG----TCTGTCAAATGCGTTTTGTG- 156
consensus_8308#0      AAAGCTCGCG-AGTGCTCCCAC-----CCTCGTTG----TTTGTCGAATGCGTTTTGTG- 113
consensus_8308#1      TACGATCGCGCAGGACTACGACAAGTTCTGGGTTGGCATTCCGTCGGAGCGGGTGCGCGT 180
                       * * ***** **  ** * **     *   ****    *  ***  *   * *  * * 

consensus_8308#2      GGTCGCAA---TAACGGAGGTGGAATA----ATAGTACGAAAAGGGAACGTAAAGAGAAA 165
consensus_8308#3      GGTCGCAA---TAACGGAGGTGGAATA----ATAGTACGAAAAGGGAACGTAAAGAGAAA 209
consensus_8308#0      GGTCGCAA---TAACGGAGGTGGAATA----ATAGTACGAAAAGGGAACGTAAAGGGAAA 166
consensus_8308#1      GGTCGCTAGCTCGACGACGGTGGCGCCCGGTACGGCACCGACCAAGCGCCCGACCACGAC 240
                      ****** *     ***  *****        *  * **  *    *  *   *     * 

consensus_8308#2      CAAAATAGTGCCA----AACAGCAAGTGCGAAC-GCCGCGCTG-TGTCCGCGTGTGTACT 219
consensus_8308#3      CAAAATAGTGCCA----AACAGCAAGTGCGAAC-GCCGCGCTG-TGTCCGCGTGTGTACT 263
consensus_8308#0      CAAAATAGTGCCA----AACAGCAAGTGCGAAC-GCCGCGCTG-TGTCCGCGTGTGTACT 220
consensus_8308#1      GACAACAGTGCCACCTTACCGGCCGGCACAAACAGAAGCGCCGGTAGCGGCCGACCCGAT 300
                       * ** *******    * * **  *  * *** *  **** * *  * **        *

consensus_8308#2      CTTCTGACCCTTCGTGT--------GTGTGTGT-GGTTTGCTGGTGTATCGTGCTG---- 266
consensus_8308#3      CTTCTGACCCTTCGTGT--------GTGTGTGT-GGTTTGCTGGTGTATCGTGCTG---- 310
consensus_8308#0      CTTCTGACCCTTCGTGT--------GTGTGTGT-GGTTTGCTGGTGTATCGTGCTG---- 267
consensus_8308#1      CTACGAGGAGTGCGGACAGAGCAAGGGATGCTTCGGATTTCCGGAGGGATGCGTCGATAG 360
                      ** *      * **           *  **  * ** ** * ** *    * *  *    

consensus_8308#2      CAAAAGGTGT---ACGGCAAACAAAAAAAAAAAACAAAAAAAATAATTCGTTCTGAAAGA 323
consensus_8308#3      CAAAAGGTGT---ACGGCAAACAAGAGAATGAAC-------------------------- 341
consensus_8308#0      CAAAAGGTGT---ACAGCGAAAAAACAAAAAAA----------TAATTCGTTCTGAAAGA 314
consensus_8308#1      CAAGAACTGCCGGGCGGTGGTCACGATCGCGGTGCTGGGAGCGCGTTACGTATTTGAA-A 419
                      *** *  **     * *     *                                     

consensus_8308#2      TCAACTCAAGGATAAGGGATTTCCTTCACCATGCTACCTCTACTTTGCTTGGCACTCGTG 383
consensus_8308#3      ------------------------------------------------------------
consensus_8308#0      TCAACTCAAGGATAAGGAGTTTCCTTCACCATGCTACCTCTACTTTGCTTGGCACTCGTG 374
consensus_8308#1      TGAAGGCAGGATACAATCGTCCTGCTTACGTTGCCTTCGGACTGTCCAGTGACGCCAAGA 479
                                                                                  

consensus_8308#2      CTGAGCACGCTAGTGCCATCGTACGGATTGCCGAACGGTGCGCCAACGTCGGTCTGCGAC 443
consensus_8308#3      ------------------------------------------------------------
consensus_8308#0      CTGAGCACGCTAGTGCCATCGTACGGATTGCCGAACGGTGCGCCAACGTCGGTCTGCGAC 434
consensus_8308#1      TGGGTGAAGACTCCGTGATTGAATGTGTCCCGGAACAGGGTACGGTAAACGCTTACGCCT 539
                                                                                  

consensus_8308#2      AATATGCTTCCGTTCCACGGTGGAGGCATCCCACCGCTCACCACCAAGACGCCGTTCCTG 503
consensus_8308#3      ------------------------------------------------------------
consensus_8308#0      AACATGCTGCCGTTCCACGGTGGAGGCATCCCACCGCTCACCACCAAGACGCCGTTCCTG 494
consensus_8308#1      CGTGGACCACGGTTGGTCCAT--ATGGATCCACACGTTTGGGAGTGCCACAAAACATCTT 597
                                                                                  

consensus_8308#2      ATCACGCCCCAAAACGTCGGTGGTCGGTAGCGGGCAGATGCTCAAGATCGATATCGAGTC 563
consensus_8308#3      ------------------------------------------------------------
consensus_8308#0      ATCACGCCCCAAA-CGTCGGTGGTCGGTAGCGGGCAGATGCTCAAGATCGATATCGAGTC 553
consensus_8308#1      CCAAGTGCTGGAGAAGTCGTACAATGATGGTGTGATTTACTGCAAAGTGGAACGCGACGC 657
                                                                                  

consensus_8308#2      CTTCCCCGCCAACATTGTGTTCAA------------------------------------ 587
consensus_8308#3      ------------------------------------------------------------
consensus_8308#0      CTTCCCCGCCAACATTGTGTTCAAGGGCTACATGATACAGGCCCGTGCTGCCGACCCGCC 613
consensus_8308#1      TGTCAGCACGGTCAAGGGCCAGAAGTTTGATCTG-------------------------- 691
                                                                                  

consensus_8308#2      ------------------------------------------------------------
consensus_8308#3      ------------------------------------------------------------
consensus_8308#0      GAACAACATTGTCGGCCGGTTTGTCGACTCGGATGCGAGCGCGATCAAGCTGATCGATTG 673
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#2      ------------------------------------------------------------
consensus_8308#3      ------------------------------------------------------------
consensus_8308#0      TCAGGCCGGAGGAGATACGGCCACACACACCAACACCAGCCCGAAGCAGGAGCTGACGCT 733
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#2      ------------------------------------------------------------
consensus_8308#3      ------------------------------------------------------------
consensus_8308#0      TGAGTGGACCGCTCCGGACAACTTCGTTGGCGATGTGATCTTCAACGCTACGATCGCGCA 793
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#2      ------------------------------------------------------------
consensus_8308#3      ------------------------------------------------------------
consensus_8308#0      GGACTACGACAAGTTCTGGGTTGGCATTCCGTCGGAGCGGGTGCGCGTGGTAGCTAGCTC 853
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#2      ------------------------------------------------------------
consensus_8308#3      ------------------------------------------------------------
consensus_8308#0      GACGACGGTGGCGCCCGGTACGGCGCCGACCAAGCGCCCAACCACGACGACAACCGTGCC 913
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#2      ------------------------------------------------------------
consensus_8308#3      ------------------------------------------------------------
consensus_8308#0      ACCTTACCGGCCGGCACAAACAGAAGCGCCGGTAGCGGCCGACCCGATCTACGAGGAGTG 973
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#2      ------------------------------------------------------------
consensus_8308#3      ------------------------------------------------------------
consensus_8308#0      TGGACAGAGCAAGGGATGCTTCGGATTTCCGGAGGGATGTGTCGATAGCAAGAACTGCCG 1033
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#2      ------------------------------------------------------------
consensus_8308#3      ------------------------------------------------------------
consensus_8308#0      GGCGGTGGTCACGATCGCGGTGCTGGGAGCGCGTTACGTATTTGAAATGAAGGCAGGATA 1093
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#2      ------------------------------------------------------------
consensus_8308#3      ------------------------------------------------------------
consensus_8308#0      CAATCGTCCTGCTTACGTTGCTTCGGACTGTCCAGTGACGCCAAGATGGGTGAAGACTCC 1153
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#2      ------------------------------------------------------------
consensus_8308#3      ------------------------------------------------------------
consensus_8308#0      GTGATTGAATGTGTCCCGGAACAGGGTACGGTAAACGCTTACGCCTCGTGGACCACGGTT 1213
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#2      ------------------------------------------------------------
consensus_8308#3      ------------------------------------------------------------
consensus_8308#0      GGTCCATATGGATCTACACGTTTGGGAGTGCCGCAAAACATCTTCCAAGTGCTGGAGAAG 1273
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#2      ------------------------------------------------------------
consensus_8308#3      ------------------------------------------------------------
consensus_8308#0      TCGTACAATATGGTGTGATTTACTGCAAAGTGGAACGCGACGCTGTCAGCACGGTCAAGG 1333
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#2      ------------------------------------------------------------
consensus_8308#3      ------------------------------------------------------------
consensus_8308#0      GCCAGAAGTTTGATCTGCTGAACGATAAGTTCCATCTGCTGCTTGCGGCCGGATCATCGG 1393
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#2      ------------------------------------------------------------
consensus_8308#3      ------------------------------------------------------------
consensus_8308#0      TGGAATCAACCAACGTCAACTATCACGACATCGGCCGTCACGTGTCGGGCAGCCCGCAGT 1453
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#2      -------------------------------------------------
consensus_8308#3      -------------------------------------------------
consensus_8308#0      CACTGGCGGAGGTTGGCCCGGTGCAGGGATCTTCGAAGCTGTTTCCGCC 1502
consensus_8308#1      -------------------------------------------------
                                                                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)