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Anopheles gambiae
cluster # 8323 cluster # 8323       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8323#0 length = 1094 sequences # 6  
consensus_8323#1 length = 1061 sequences # 2  
consensus_8323#2 length = 588 sequences # 1  
consensus_8323#3 length = 493 sequences # 1  

consensusID : consensus_8323#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1094
fasta sequence
                              [CCGATGAACACAGCAAAACCTAATGTACGAGGAAATATTATATATATACAATTATATATATATATATGAAACTGGAAACATAAAATGAGGAGATTAAAAAAAAACACAAGAAAAATTCTAAATAAATATAAATTTTTTATATAGAAATGTAATATCTTAAACAAACAAACAAAAAAAAAGCACACAGGTGAATGGGGAATGGAGGTAGCTGATGACCGCAAGCAGCATTGATTCAGTTTGCGCACAGAGCTGTGAAAATATGTGGAACAGAACAGAAGATAACGGAGCAAAACTAGAAAACTAATAGACAAACAAAAAATAACTGGCGAAACTGGAGTGGCGAAACAAACTAACATAAATCGGTACACGGTAAACAGATACATACACTACACAGGCATACATCCATACAACACA-G-AAAAGGTCACAAGAGCGTTGAACACAAGAGTTTGTAAATAGACATAAACCTGTTTTAGGTTGTTTGTTTTTTTTTCGCAAATCGATCCGTAAACAGGGCACACAAACCAATCCACACAAACACACATCCTGTTCTATCGCCTGTGAGAGTCCGATAACGAACAACACGCACTGTGTTACACAAAATTCGAAAAATCAAACCCCCTAATTCTGGCTATCACGCGTCACAACCGTACACAATGTAAGGTGGAAGTGTCCGTGCTGGTGGCCGCACTCAAGCTCAATTTTCGCGACACACACACACACAGCGGGGACTAAGCGGGGATCATAAGGGTAAAGGGTGATGAAACCCCTTCTTGCTGGGTTTTGATTTCTGTTATCAAAGTTACGCTCACTGACCGAGTATTATAGACCCGAGTTCTACTCGCGAAGATTATAATCAAGCATTAGTAGGTGAGGAAAAAAACACAGCGATAGAGACGATAGAAACAGTAAAAAATCAAATTGCATACATATTCCAGTTTTTATTACCAAACTCTTG--CTA-AACAGAAACACAA--CCCCCAACCA---CCCCCCCCCCCCCCCCTCTTCCCCGACAAACGTAAGTAGTGAAACAAAAAACACAAACAAAACTATAAATATATACATAGAAATACTAACGCAACACAACACAGTACGAAGCA]

[+] EMBL BM638179             [CCGATGAACACAGCAAAACCTAATGTACGAGGAAATATTATATATATACAATTATATATATATATATGAAACTGGAAACATAAAATGAGGAGATTAAAAAAAAACACAAGAAAAATTCTAAATAAATATAAATTTTTTATATAGAAATGTAATATCTTAAACAAACAAACAAAAAAAAAGCACACAGGTGAATGGGGAATGGAGGTAGCTGATGACCGCAAGCAGCATTGATTCAGTTTGCGCACAGAGCTGTGAAAATATGTGGAACAGAACAGAAGATAACGGAGCAAAACTAGAAAACTAATAGACAAACAAAAAATAACTGGCGAAACTGGAGTGGCGAAACAAACTAACATAAATCGGTACACGGTAAACAGATACATACACTACACAGGCATACATCCATACAACACACA AAAAGGTCACAAGAGCGTTGAACACAATAGTTTGTAAATAGACATAAACCTGTTTTAGGTTGTTTGTTTTTTTTTCGCAAATCGATCCGTAAACAGGACACACAAA AAGTCCACACAAACACACATCCTTTTCTATCGCCTGTGAGAGTCCGATAACGAACAACACGCACTGTGTTACACAAAATTCGAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX617421             [                                                                                                                                                                                    CACACAGGTGAATGGGGAATGGAGGTAGCTGATGACCGCAGGCAGCATTGATTCAGTTTGCGCACAGAGCTGTGAAAATATGTGGAACAGAACAGAAGATAACGGAGCAAAACTAG AAACTAATAGACAAACAAAAAATAACTGGCGAAACTGGAGTGGCGAAACAAACTAACATAAATCGGTACACGGTAAACAGATACATACACTACACAGGCATACATCCATACAACACA G AAAAGGTCACAAGAGCGTTGAACACAAGAGTTTGTAAATAGACATAAACCTGTTTTAGGTTGTTTGTTTTTTTTTCGCAAATCGATCCGTAAACAGGGCACACAAACCAATCCACACAAACACACATCCTGTTCTATCGCCTGTGAGAGTCCGATAACGAACAACTCGCACTGTGTTACACAAAATTCGAAAAATCAAACCCCCTAATTCTGGCTATCACGCGTCACAACCGTACACAATGTAAGGTGGAAGTGTCCGTGCTGGTGGCCGCACTCAAGCTCAATTTTCGCGACACACACACACACAGCGGGGACTAAGCGGGGATCATAAGGGTAAAGGGTGATGAAACCCCTTCTTGCTGGGTTTTGAT                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX610193             [                                                                                                                                                                                                                                                                                                                                                                       TCGGTACACGGTAAACAGATACATACACTACACAGGCATACATCCATACAACACA G AAAAGGTCACAAGAGCGTTGAACACAAGAGTTTGTAAATAGACATAAACCTGTTTTAGGTTGTTTGTTTTTTTTTCGCAAATCGATCCGTAAACAGGGCACACAAACCAATCCACACAAACACACATCCTGTTCTATCGCCTGTGAGAGTCCGATAACGAACAACACGCACTGTGTTACACAAAATTCGAAAAATCAAACCCCCTAATTCTGGCTATCACGCGTCACAACCGTACACAATGTAAGGTGGAAGTGTCCGTGCTGGTGGCCGCACTCAAGCTCAATTTTCGCGACACACACACACACAGCGGGGACTAAGCGGGGATCATAAGGGTAAAGGGTGATGAAACCCCTTCTTGCTGGGTTTTGATTTCTGTTATCAAAGTTACGCTCACTGACCGAGTATTATAGACCCGAGTTCTACTCGCGAAGATTATAATCAAGCATTAGTAGGTGAGGAAAAAAACACAGCGATAGAGACGATAGAAACAGTAAAAAATCAAATTGCATACATATTCCAGTTTTTATTACCAAACTCTT                                                                                                                                                    ]
[+] EMBL BX608016             [                                                                                                                                                                                                                                                                                                                                                                                                            ATACATCCATACAACACA GAAAAAGGTCACAAGAGCGTTGAACACAAGAGTTTGTAAATAGACATAAACCTGTTTTAGGTTGTTTGTTTTTTTTTCGCAAATCGATCCGTAAACAGGGCACACAAACCAATCCACACAAACACACATCCTGTTCTATCGCCTGTGAGAGTCCGATAACGAACAACACGCACTGTGTTACACAAAATTCGAAAAATCAAACCCCCTAATTCTGGCTATCACGCGTCACAACCGTACACAATGTAAGGTGGAAGTGTCCGTGCTGGTGGCCGCACTCAAGCTCAATTTTCGCGACACACACACACACAGCGGGGACTAAGCGGGGATCATAAGGGTAAAGGGTGATGAAACCCCTTCTTGCTGGGTTTTGATTTCTGTTATCAAAGTTACGCTCACTGACCGAGTATTATAGACCCGAGTTCTACTCGCGAAGATTATAATCAAGCATTAGTAGGTGAGGAAAAAAACACAGCGATAGAGACGATAGAAACAGTAAAAAATCAAATTGCATACATATTCCAGTTTTTATTACCAAACTCTTG  CTA AACAGAAACACAA  CCCCCAACCA   CCC                                                                                                              ]
[+] EMBL BX609356             [                                                                                                                                                                                                                                                                                                                                                                                                                           ACA G AAAAGGTCACAAGAGCGTTGAACACAAGAGTTTGTAAATAGACATAAACCTGTTTTAGGTTGTTTGTTTTTTTTTCGCAAATCGATCCGTAAACAGGGCACACAAACCAATCCACACAAACACACATCCTGTTCTATCGCCTGTGAGAGTCCGATAACGAACAACACGCACTGTGTTACACAAAATTCGAAAAATCAAACCCCCTAATTCTGGCTATCACGCGTCACAACCGTACACAATGTAAGGTGGAAGTGTCCGTGCTGGTGGCCGCACTCAAGCTCAATTTTCGCGACACACACACACACAGCGGGGACTAAGCGGGGATCATAAGGGTAAAGGGTGATGAAACCCCTTCTTGCTGGGTTTTGATTTCTGTTATCAAAGTTACGCTCACTGACCGAGTATTATAGACCCGAGTTCTACTCGCGAAGATTATAATCAAGCATTAGTAGGTGAGGAAAAAAACACAGCGATAGAGACGATAGAAACAGTAAAAAATCAAATTGCATACATATTCCAGTTTTTATTACCAAACTCTTG  CTA AACAGAAACACAA  CCCCCAACCA   CCCCCCCCCCCCCCCCTCTTCC                                                                                           ]
[+] EMBL BM610251             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCGGTGAGAGTCCGATAACGAACAACACGCACTGTGTTACACAAAATTCGAAAAATCAAACCCCCTAATTCTGGCTATCACGCGTCACAACCGTACACAATGTAAGGTGGAAGTGTCCGTGCTGGTGGCCGCACTCAAGCTCAATTTTCGCGACACATACACACACAGCGGGGACTAAGCGGGGATCATAAGGGTAAAGGGTGATGAAACCCCTTCTTGCTGGGTTTTGATTTCTGTTATCAAAGTTACGCTCACTGACCGAGTATTATAGACCCGAGTTCTACTCGCGAAGATTATAATCAAGCATTAGTAGGTGAGGAAAAAAACACAGCGATAGAGACGATAGAAACAGTAAAAAATCAAATTGCATACATATTCCAGTTTTTATTACCAAACTCTTGTACAAGAAAAAAAAC CAACCCCCCCAACCACCCCCCCCCCCCCCCCCCCTCTTCCCCGACAAACGTAAGTAGTGAAACAAAAAACACAAACAAAACTATAAATATATACATAGAAATACTAACGCAACACAACACAGTACGAAGCA]


>consensus_8323#0 CCGATGAACACAGCAAAACCTAATGTACGAGGAAATATTATATATATACAATTATATATA TATATATGAAACTGGAAACATAAAATGAGGAGATTAAAAAAAAACACAAGAAAAATTCTA AATAAATATAAATTTTTTATATAGAAATGTAATATCTTAAACAAACAAACAAAAAAAAAG CACACAGGTGAATGGGGAATGGAGGTAGCTGATGACCGCAAGCAGCATTGATTCAGTTTG CGCACAGAGCTGTGAAAATATGTGGAACAGAACAGAAGATAACGGAGCAAAACTAGAAAA CTAATAGACAAACAAAAAATAACTGGCGAAACTGGAGTGGCGAAACAAACTAACATAAAT CGGTACACGGTAAACAGATACATACACTACACAGGCATACATCCATACAACACAGAAAAG GTCACAAGAGCGTTGAACACAAGAGTTTGTAAATAGACATAAACCTGTTTTAGGTTGTTT GTTTTTTTTTCGCAAATCGATCCGTAAACAGGGCACACAAACCAATCCACACAAACACAC ATCCTGTTCTATCGCCTGTGAGAGTCCGATAACGAACAACACGCACTGTGTTACACAAAA TTCGAAAAATCAAACCCCCTAATTCTGGCTATCACGCGTCACAACCGTACACAATGTAAG GTGGAAGTGTCCGTGCTGGTGGCCGCACTCAAGCTCAATTTTCGCGACACACACACACAC AGCGGGGACTAAGCGGGGATCATAAGGGTAAAGGGTGATGAAACCCCTTCTTGCTGGGTT TTGATTTCTGTTATCAAAGTTACGCTCACTGACCGAGTATTATAGACCCGAGTTCTACTC GCGAAGATTATAATCAAGCATTAGTAGGTGAGGAAAAAAACACAGCGATAGAGACGATAG AAACAGTAAAAAATCAAATTGCATACATATTCCAGTTTTTATTACCAAACTCTTGCTAAA CAGAAACACAACCCCCAACCACCCCCCCCCCCCCCCCTCTTCCCCGACAAACGTAAGTAG TGAAACAAAAAACACAAACAAAACTATAAATATATACATAGAAATACTAACGCAACACAA CACAGTACGAAGCA



consensusID : consensus_8323#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1061
fasta sequence
                              [CCGCGGACGCGTGGGCTAGAACGCTTTAAACCTGTATGTCATTTCGTCGTCGTTTAAGCTGTGATTAAGTGTATATGATATATGAACGTTAAAATAGGGATGTGAGCATTAAAATAGGGATAATGCAGTGTAGTAAGTTGTATAGTGTAATGCAAAAAGACACAGGGAAACGAAGGTGTAGCGCCCGTTTTTTTTTGTTTTCTGTTCTTCTGTCTCGCTGCTGTATGCATTCGGCTGTCGCAATTTGGTTCCCACATTGAACCCATTAGAACGTTCTGGTTTTTGTGCGGTTTTTTGTGTTTGCACACGCTTTAGAACCTAAAACTGTGCATCGAAACACACACACACACACATATTCAAAGGACATTTGGGGAAAGGGCATCTACTTAAGGCTTCATCTAGTTGAAACGCTAAAGTAGAACACGAACACCTAC-TCACCCACATACACACATACACACATCCACACGAAAAATTGTAAAGAATCAGACGAATTCGATTGTAGGGCTTTAGTAGTAGTGAGTAGTACTTAAGTGCAAGCGGTAGCTCAAACTTGCTTGTTGCGGTTAAAAGATTTACACTTCGTTCGTTTGTTGCCGTTGAAGCCGCTTGTGAGTGTGTGCGTGTGTGAATGTGTGTTTTCCTGTCACATTGTAGATACCTTCTGAACAAGACGCACATCTGTATAGCAGACCGAATTGAAGCCGATATTTAGGACCCATTTTTAAACACCAAATAATCCCACCCGCTGCTACGATATCCCGGATAGCCTAGAGAGCTGGACTCTTCTCCACTTAACCATCAGGCCCTAGTAAACGAAGGATCCAGCATCTGGCATGATTGTGTACAGACAGGAAGACACATACACACATAGAACCCAGGATACGATTAAAAGATGAAAGAAAAAAAACGAAGATTATCTCGATACTTAACATTAAGTTAAACGCAGACTAAACATTGTGGAAATAGTTTGATCAATTGTGTAGTAGTATCAGTGAATATTAAGTTATAAATGTGTTTTTTTATACTATATGCTAGTATTTCGCCTTTTCCGGCTAAGCGAA]

[+] EMBL BM637238             [CCGCGGACGCGTGGGCTAGAACGCTTTAAACCTGTATGTCATTTCGTCGTCGTTTAAGCTGTGATTAAGTGTATATGATATATGAACGTTAAAATAGGGATGTGAGCATTAAAATAGGGATAATGCAGTGTAGTAAGTTGTATAGTGTAATGCAAAAAGACACAGGGAAACGAAGGTGTAGCGCCCGTTTTTTTTTGTTTTCTGTTCTTCTGTCTCGCTGCTGTATGCATTCGGCTGTCGCAATTTGGTTCCCACATTGAACCCATTAGAACGTTCTGGTTTTTGTGCGGTTTTTTGTGTTTGCACACGCTTTAGAACCTAAAACTGTGCATCGAAACACACACACACACACATATTCAAAGGACATTTGGGGAAAGGGCATCTACTTAAGGCTTCATCTAGTTGAAACGCTAAAGTAGAACACGAACACCTAC TCACCCACATACACACATACACACATCCACACGAAAAATTGTAAAGAATCAGACGAATTCGATTGTAGGGCTTTAGTAGTAGTGAGTAGTACTTAAGTGCAAGCGGTAGCTCAAACTTGCTTGTTGCGGTTAAAAGATTTACACTTCGTTCGTTTGTTGCCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX618259             [                                                                                                                                                                                                                                                                                                                                                                 cATTCAAAGGACATTTGGGGAAAGGGCATCTACTTAAGGCTTCATCTAGTTGAAACGCAAAAGTAGAACACGAACACCTGCATCACCCACATACACACATACACACATCCACACGAAAAATTGTAAACTATCAGACGAATTCGATTGAAGGGCTTTAGTAGTAGTGAGTAGTACTTAAGTGCAAGCGGTAGCTCAAACTTGCTTGTTGCGGTTAAAAGATTTACACTTCGTTCGTTTGCTGCCGTTGAAGCCGCTTGTGAGTGTGTGCGTGTGTGAATGTGTGTTTTCCTGTCACATTGTAGATACCTTCTGAACAAGACGCACATCTGTATAGCAGACCGAATTGAAGCCGATATTTAGGACCCATTTTTAAACACCAAATAATCCCACCCGCTGCTACGATATCCCGGATAGCCTAGAGAGCTGGACTCTTCTCCACTTAACCATCAGGCCCTAGTAAACGAAGGATCCAGCATCTGGCATGATTGTGTACAGACAGGAAGACACATACACACATAGAACCCAGGATACGATTAAAAGATGAAAGAAAAAAAACGAAGATTATCTCGATACTTAACATTAAGTTAAACGCAGACTAAACATTGTGGAAATAGTTTGATCAATTGTGTAGTAGTATCAGTGAATATTAAGTTATAAATGTGTTTTTTTATACTATATGCTAGTATTTCGCCTTTTCCGGCTAAGCGAA]


>consensus_8323#1 CCGCGGACGCGTGGGCTAGAACGCTTTAAACCTGTATGTCATTTCGTCGTCGTTTAAGCT GTGATTAAGTGTATATGATATATGAACGTTAAAATAGGGATGTGAGCATTAAAATAGGGA TAATGCAGTGTAGTAAGTTGTATAGTGTAATGCAAAAAGACACAGGGAAACGAAGGTGTA GCGCCCGTTTTTTTTTGTTTTCTGTTCTTCTGTCTCGCTGCTGTATGCATTCGGCTGTCG CAATTTGGTTCCCACATTGAACCCATTAGAACGTTCTGGTTTTTGTGCGGTTTTTTGTGT TTGCACACGCTTTAGAACCTAAAACTGTGCATCGAAACACACACACACACACATATTCAA AGGACATTTGGGGAAAGGGCATCTACTTAAGGCTTCATCTAGTTGAAACGCTAAAGTAGA ACACGAACACCTACTCACCCACATACACACATACACACATCCACACGAAAAATTGTAAAG AATCAGACGAATTCGATTGTAGGGCTTTAGTAGTAGTGAGTAGTACTTAAGTGCAAGCGG TAGCTCAAACTTGCTTGTTGCGGTTAAAAGATTTACACTTCGTTCGTTTGTTGCCGTTGA AGCCGCTTGTGAGTGTGTGCGTGTGTGAATGTGTGTTTTCCTGTCACATTGTAGATACCT TCTGAACAAGACGCACATCTGTATAGCAGACCGAATTGAAGCCGATATTTAGGACCCATT TTTAAACACCAAATAATCCCACCCGCTGCTACGATATCCCGGATAGCCTAGAGAGCTGGA CTCTTCTCCACTTAACCATCAGGCCCTAGTAAACGAAGGATCCAGCATCTGGCATGATTG TGTACAGACAGGAAGACACATACACACATAGAACCCAGGATACGATTAAAAGATGAAAGA AAAAAAACGAAGATTATCTCGATACTTAACATTAAGTTAAACGCAGACTAAACATTGTGG AAATAGTTTGATCAATTGTGTAGTAGTATCAGTGAATATTAAGTTATAAATGTGTTTTTT TATACTATATGCTAGTATTTCGCCTTTTCCGGCTAAGCGAA



consensusID : consensus_8323#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 588
fasta sequence
                              [ACATACACACATACACACATCCACACGAAAAATTGTAAACTATCAGACGAATTCGATTGAAGGGCTTTAGTAGTAGTGAGTAGTACTTAAGTGCAAGCGGTAGCTCAAACTTGCTTGTTGCGGTTAAAAGATTTACACTTCGTTCGTTTGCTGCCGTTGAAGCCGCTTGTGAGTGTGTGCGTGTGTGAATGTGTGTTTTCCGGTCACATTGTAGATACCTTCTGAACAAGACGCACATCTGTATAGCAGACCGAATTGAAGCCGATATTTAGGACCCATTTTTAAACACCAAATAATCCCACCCGCTGCTACGATATCCCGGATAGCCTAGAGAGCTGGACTCTTCTCCACTTAACCATCAGGCCCTAGTAAACGAAGGATCCAGCATCTGGCATGATTGTGTACAGACAGGAAGACACAAGTGTGTGTGTGTGTGTGTGTGAATGAATGAGTGTGCATGTGTGTGTATGCGTGATGCCAAACAATCAATATGCGAAGCAATCTGGTACAACGGCGGTGTCAGTACAACGGTTGTCCAGAAGCTCCTACGGCTACAACGGTGCAGACGCTTGATGTGGACCCGGTTGT]

[+] EMBL BX614700             [ACATACACACATACACACATCCACACGAAAAATTGTAAACTATCAGACGAATTCGATTGAAGGGCTTTAGTAGTAGTGAGTAGTACTTAAGTGCAAGCGGTAGCTCAAACTTGCTTGTTGCGGTTAAAAGATTTACACTTCGTTCGTTTGCTGCCGTTGAAGCCGCTTGTGAGTGTGTGCGTGTGTGAATGTGTGTTTTCCGGTCACATTGTAGATACCTTCTGAACAAGACGCACATCTGTATAGCAGACCGAATTGAAGCCGATATTTAGGACCCATTTTTAAACACCAAATAATCCCACCCGCTGCTACGATATCCCGGATAGCCTAGAGAGCTGGACTCTTCTCCACTTAACCATCAGGCCCTAGTAAACGAAGGATCCAGCATCTGGCATGATTGTGTACAGACAGGAAGACACAAGTGTGTGTGTGTGTGTGTGTGAATGAATGAGTGTGCATGTGTGTGTATGCGTGATGCCAAACAATCAATATGCGAAGCAATCTGGTACAACGGCGGTGTCAGTACAACGGTTGTCCAGAAGCTCCTACGGCTACAACGGTGCAGACGCTTGATGTGGACCCGGTTGT]


>consensus_8323#2 ACATACACACATACACACATCCACACGAAAAATTGTAAACTATCAGACGAATTCGATTGA AGGGCTTTAGTAGTAGTGAGTAGTACTTAAGTGCAAGCGGTAGCTCAAACTTGCTTGTTG CGGTTAAAAGATTTACACTTCGTTCGTTTGCTGCCGTTGAAGCCGCTTGTGAGTGTGTGC GTGTGTGAATGTGTGTTTTCCGGTCACATTGTAGATACCTTCTGAACAAGACGCACATCT GTATAGCAGACCGAATTGAAGCCGATATTTAGGACCCATTTTTAAACACCAAATAATCCC ACCCGCTGCTACGATATCCCGGATAGCCTAGAGAGCTGGACTCTTCTCCACTTAACCATC AGGCCCTAGTAAACGAAGGATCCAGCATCTGGCATGATTGTGTACAGACAGGAAGACACA AGTGTGTGTGTGTGTGTGTGTGAATGAATGAGTGTGCATGTGTGTGTATGCGTGATGCCA AACAATCAATATGCGAAGCAATCTGGTACAACGGCGGTGTCAGTACAACGGTTGTCCAGA AGCTCCTACGGCTACAACGGTGCAGACGCTTGATGTGGACCCGGTTGT



consensusID : consensus_8323#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 493
fasta sequence
                              [CAGATACATACACTACACAGGCATACATCCATACAACACACAAAAGGTCACAAGAGCGTTGAACACAAGAGTTTGTAAATAGACATAAACCTGTTTTAGGTTGTTTGTTTTTTTTTCGCAAATCGATCCGTAAACAGGTCACACAAACCAATCCACACAAACACACATCCTGTTCTATCGCCTGTGAGAGTCCGATAACGAACAACACGCACTGTGTGTGTGTGTGAATGAATGAGTGTGCATGTGTGTGTATGCGTGATGCCAAACAATCAATATGCGAAGCAATCTGGTACAACGGCGGTGTCAGTACAACGGTTGTCCAGAAGCTCCTACGGCTACAACGGTGCAGACGCTTGATGTGGACCCGGTTGTACATTAGTGAACGAAGGTGTGTGTGTGTGTGTGTGTGTTGGTTTTGCAATGTCAATTGCAAGCAGAAAAGAAACACAACAACAAAGAAGCAACCAAAACAAATTGCAAAACAGTGGAGCTA]

[+] EMBL BX609827             [CAGATACATACACTACACAGGCATACATCCATACAACACACAAAAGGTCACAAGAGCGTTGAACACAAGAGTTTGTAAATAGACATAAACCTGTTTTAGGTTGTTTGTTTTTTTTTCGCAAATCGATCCGTAAACAGGTCACACAAACCAATCCACACAAACACACATCCTGTTCTATCGCCTGTGAGAGTCCGATAACGAACAACACGCACTGTGTGTGTGTGTGAATGAATGAGTGTGCATGTGTGTGTATGCGTGATGCCAAACAATCAATATGCGAAGCAATCTGGTACAACGGCGGTGTCAGTACAACGGTTGTCCAGAAGCTCCTACGGCTACAACGGTGCAGACGCTTGATGTGGACCCGGTTGTACATTAGTGAACGAAGGTGTGTGTGTGTGTGTGTGTGTTGGTTTTGCAATGTCAATTGCAAGCAGAAAAGAAACACAACAACAAAGAAGCAACCAAAACAAATTGCAAAACAGTGGAGCTA]


>consensus_8323#3 CAGATACATACACTACACAGGCATACATCCATACAACACACAAAAGGTCACAAGAGCGTT GAACACAAGAGTTTGTAAATAGACATAAACCTGTTTTAGGTTGTTTGTTTTTTTTTCGCA AATCGATCCGTAAACAGGTCACACAAACCAATCCACACAAACACACATCCTGTTCTATCG CCTGTGAGAGTCCGATAACGAACAACACGCACTGTGTGTGTGTGTGAATGAATGAGTGTG CATGTGTGTGTATGCGTGATGCCAAACAATCAATATGCGAAGCAATCTGGTACAACGGCG GTGTCAGTACAACGGTTGTCCAGAAGCTCCTACGGCTACAACGGTGCAGACGCTTGATGT GGACCCGGTTGTACATTAGTGAACGAAGGTGTGTGTGTGTGTGTGTGTGTTGGTTTTGCA ATGTCAATTGCAAGCAGAAAAGAAACACAACAACAAAGAAGCAACCAAAACAAATTGCAA AACAGTGGAGCTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8323#0      ------------------------------------------------CCGATGAACACA 12
consensus_8323#3      ------------------------------------------------------------
consensus_8323#1      CCGCGGACGCGTGGGCTAGAACGCTTTAAACCTGTATGTCATTTCGTCGTCGTTTAAGCT 60
consensus_8323#2      ------------------------------------------------------------
                                                                                  

consensus_8323#0      GCAAAACCTAATGTACGAGGAAATATTATATATATACAATTATATATATATATATGAAAC 72
consensus_8323#3      ------------------------------------------------------------
consensus_8323#1      GTGATTAAGTGTATATGATATATGAACGTTAAAATAGGGATGTGAGCATTAAAATAGGGA 120
consensus_8323#2      ------------------------------------------------------------
                                                                                  

consensus_8323#0      TGGAAACATAAAATGAGGAGATTAAAAAAAAACACAAGAAAAATTCTAAATAAATATAAA 132
consensus_8323#3      ------------------------------------------------------------
consensus_8323#1      TAATGCAGTGTAGTAAGTTGTATAGTGTAATGCAAAAAGACACAGGGAAACGAAGGTGTA 180
consensus_8323#2      ------------------------------------------------------------
                                                                                  

consensus_8323#0      TTTTTTATATAGAAATGTAATATCTTAAACAAACAAACAAAAAAAAAGCACACAGGTGAA 192
consensus_8323#3      ------------------------------------------------------------
consensus_8323#1      GCGCCCGTTTTTTTTTGTTTTCTGTTCTTCTGTCTCGCTGCTGTA---TGCATTCGGCTG 237
consensus_8323#2      ------------------------------------------------------------
                                                                                  

consensus_8323#0      TGGGGAATGGAGGTAGCTGATGACCGCAAGCAGCATTGATTCAGTTTGCGCACAGAGCTG 252
consensus_8323#3      ------------------------------------------------------------
consensus_8323#1      TCGCAATTTGGTTCCCACATTGAACCCATTAGAACGTTCTGGTTTTTGTGCGGTTTTTTG 297
consensus_8323#2      ------------------------------------------------------------
                                                                                  

consensus_8323#0      TGAAAATATGTGGAACAGAACAGAAGATAACGGAGCAAAACTAGAAAACTAATAGACAAA 312
consensus_8323#3      ------------------------------------------------------------
consensus_8323#1      TGTTTGCACACGCTTTAGAACCTAAAACTGTGCATCGAAACACACACACACACACATATT 357
consensus_8323#2      ------------------------------------------------------------
                                                                                  

consensus_8323#0      CAAAAAATAACTGGCGAAACTGGAGTGGCGAAACA----AACTAACATAAATCGGTACAC 368
consensus_8323#3      ------------------------------------------------------------
consensus_8323#1      CAAAGGACATTTGGGGAAAGGGCATCTACTTAAGGCTTCATCTAGTTGAAACGCTAAAGT 417
consensus_8323#2      ------------------------------------------------------------
                                                                                  

consensus_8323#0      GGTAAACAGATACATACAC-TACACAGGCATACATCCATACAAC-ACAGAAAAGGTCACA 426
consensus_8323#3      ------CAGATACATACAC-TACACAGGCATACATCCATACAAC-ACACAAAAGGTCACA 52
consensus_8323#1      AGAACACGAACACCTACTCACCCACATACACACATACACACATCCACACGAAAAATTGTA 477
consensus_8323#2      -----------------------ACATACACACATACACACATCCACACGAAAAATTGTA 37
                                             ***  ** **** ** *** * ***  ***  *   *

consensus_8323#0      AGAGCGTTGAACACAAGAGTTTGTAAATAGACATAAACCTGTTTTAGGTTGTTTGTTTTT 486
consensus_8323#3      AGAGCGTTGAACACAAGAGTTTGTAAATAGACATAAACCTGTTTTAGGTTGTTTGTTTTT 112
consensus_8323#1      A-AGAATCAGAC----GAATTCGATTGTAGGGCTTTAGTAGTAGTGAGTAG-----TACT 527
consensus_8323#2      A-ACTATCAGAC----GAATTCGATTGAAGGGCTTTAGTAGTAGTGAGTAG-----TACT 87
                      * *   *   **    ** ** *     **   *  *   **  *  ** *     *  *

consensus_8323#0      TTTTCGCAAATCGATCCGTAAACAGGGCACACAAACCAATCCACACAAACACACATCCTG 546
consensus_8323#3      TTTTCGCAAATCGATCCGTAAACAGGTCACACAAACCAATCCACACAAACACACATCCTG 172
consensus_8323#1      TAAGTGCAAGCGGTAGCTCAAAC---TTGCTTGTTGCGGTTAAAAGATTTACACTTCGTT 584
consensus_8323#2      TAAGTGCAAGCGGTAGCTCAAAC---TTGCTTGTTGCGGTTAAAAGATTTACACTTCGTT 144
                      *    ****   *   *  ****      *      *  *  * * *   **** ** * 

consensus_8323#0      T-TCTATCGCCTGTGAGAGTCCGATAACGAACA-ACACGCACTGTGT-TACACAAAATTC 603
consensus_8323#3      T-TCTATCGCCTGTGAGAGTCCGATAACGAACA-ACACGCACTGTGTGTGTGTGTGAATG 230
consensus_8323#1      CGTTTGTTGCCGTTGAAG--CCGCTTGTGAGTGTGTGCGTG-TGTGAATGTGTGTTTTCC 641
consensus_8323#2      CGTTTGCTGCCGTTGAAG--CCGCTTGTGAGTGTGTGCGTG-TGTGAATGTGTGTTTTCC 201
                        * *   ***  ***    *** *   **       **   ****  *           

consensus_8323#0      GAAAAAT---CAAACCCCCTAATTCTGGCTATCACGCG-TCACAACCGTACACAAT---G 656
consensus_8323#3      AATGAGTGTGCATGTGTGTGTATGCGTGATGCCAAACAATCAATATGCGAAGCAATCTGG 290
consensus_8323#1      TGTCACATTGTAGATACCTTCTGAACAAGACGCACATCTGTATAGCAGACCGAATTGAAG 701
consensus_8323#2      GGTCACATTGTAGATACCTTCTGAACAAGACGCACATCTGTATAGCAGACCGAATTGAAG 261
                          *      *                    **       *           * *   *

consensus_8323#0      TAAGGTGGAAGTGTCCGTGCTGGTGGCCGCACTCAAGCTCAATTTTCGCGACACACACAC 716
consensus_8323#3      TACAACGGCGGTGTCAGTAC-AACGGTTGTCCAGAAGCTC--CTACGGCTACAACGGTGC 347
consensus_8323#1      CCGATATTTAGGACCCATTTTTA-AACACCAAATAATCCCACCCGCTGCTACGATATCCC 760
consensus_8323#2      CCGATATTTAGGACCCATTTTTA-AACACCAAATAATCCCACCCGCTGCTACGATATCCC 320
                                *   *  *                ** * *       ** **       *

consensus_8323#0      ACACAGCGGGGACTAAGCGGGGATCATAAGGGTAAAGGGTGATGAAACCCCTTCTTGCTG 776
consensus_8323#3      AGACGCTTGATGTGGACCCGGTTGTACATTAGTGAACGAAGGTGTG--TGTGTGTGTGTG 405
consensus_8323#1      GGATAGCCTAGA-GAGCTGGACTCTTCTCCACTTAACCATCAGGCC--CTAGTAAACGAA 817
consensus_8323#2      GGATAGCCTAGA-GAGCTGGACTCTTCTCCACTTAACCATCAGGCC--CTAGTAAACGAA 377
                        *                *            * **       *        *       

consensus_8323#0      GGTTTTGATTTCTGTTATCAAAGTTACGCTCACTGACCGAGTATTATAGACCCGAGTTCT 836
consensus_8323#3      TGTGTTGGTTT-TGCAATGTCAATTGCAAGCAGAAAAGAAACACAACA-ACAAAGAAGCA 463
consensus_8323#1      GGATCCAGCATCTGGCATGATTGT-GTACAGACAGGAAGACACATACACACATAGAACCC 876
consensus_8323#2      GGATCCAGCATCTGGCATGATTGT-GTACAGACAGGAAGACACAAGTGTGTGTGTGT--- 433
                       *        * **  **     *       *       *                    

consensus_8323#0      ACTCGCGAAGATTATAATCAAGCATTAGTAGGTGAGGAAAAAAACACAGCGATAGAGACG 896
consensus_8323#3      ACCAAAACAAATTGCAAAACAGTGGAGCTA------------------------------ 493
consensus_8323#1      A-GGATACGATTAAAAGATGAAAGAAAAAAAACGAAGATTATCTCGATACTTAACATTAA 935
consensus_8323#2      --GTGTGTG-TGAATGAATGAGTGTGCATGTGTGTGTATG--CGTGATGCCAAACAATCA 488
                                          *                                       

consensus_8323#0      ATAGAAACAGTAAAAAATCAAATTGCATACATATTCCAGTTTTTATTACCAAACTCTTGC 956
consensus_8323#3      ------------------------------------------------------------
consensus_8323#1      GTTAA--ACGCAGACTAA-ACATTGTGGAAATAGTTTGATCAATTGTGTAGTAGTATCAG 992
consensus_8323#2      ATATGCGAAGCAATCTGGTACAACGGCGGTGTCAGTACAACGGTTGTCCAGAAGCTCCTA 548
                                                                                  

consensus_8323#0      TAAACAGAAACACAACCCCCAACCACCCCCCCCCCCCCCCCTCTTCCCCGACAAACGTAA 1016
consensus_8323#3      ------------------------------------------------------------
consensus_8323#1      TGAATATTAAGTTATAAATGTGTTTTTTTATACTATATGCTAGTATTTCGCCTTTTCCGG 1052
consensus_8323#2      CGGCTACAACGGTGCAGACGCTTGATGTGGACCCGGTTGT-------------------- 588
                                                                                  

consensus_8323#0      GTAGTGAAACAAAAAACACAAACAAAACTATAAATATATACATAGAAATACTAACGCAAC 1076
consensus_8323#3      ------------------------------------------------------------
consensus_8323#1      CTAAGCGAA--------------------------------------------------- 1061
consensus_8323#2      ------------------------------------------------------------
                                                                                  

consensus_8323#0      ACAACACAGTACGAAGCA 1094
consensus_8323#3      ------------------
consensus_8323#1      ------------------
consensus_8323#2      ------------------
                                        




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)