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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8339#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2344 fasta sequence
[CTCTAGCCCCACCAAAAGATTTATTTGTATATTCCCAGCATCCGTTCACCTTTCGGATCAAACGGACTTCTCAAATGGCAATCGGCATCGTACAGCTTGCCCATCACCTCGATCTGGTAGTGGCCCGACTGCAGGAACTGGTTCGTGATTGGGCTACTGTCTGCGCGTTGCACGTACGCCTGGCCGATCGGTTTCTGGAGCGTGTAACCATACTCTCCGCGCCGCAGATGTCCCACAATCTCTCCGTCCCGATAGACCGCTTCCAATCCCCAGATTGGTACCTGTTCCCGCAGCGTAAAGAATGCCAACCGCCGACTGACGCCATTTTCGCGCTGTCGTTCCACAATTTCCTTGCCCTGATACTCGCCCTCCTTTCGGCACACAAAGCCCAGGAAGGCCTCGATCGGCGTGTCGTCCGACCGGAGATCCGATCCCCACAGATGGTAGGACTTCTCGCTGCTGAGCGAGTACAGTGCCCGGTAGCCCGCGTTTCGCAGACTCTCCTTATATCCAGCCTTCATTAGCGCGTTGTACACATCGTTACAGCTTTCCTCGGGAATGTGCAGCTCGTAGCCCAGCTCGCCGACGAAGCTGACGCGCAACACACGCACATGGCAGCTGTAGTGCGGATTGATCTTAATCGTCAGTATGGCGGTAGAGTTCATCGGCAACAGCTTCTCGTTCGATAGATCAAAGTCGGTGATCTTCTGCAGAATTTCGCGGCTTTTCGGTCCCTGGAGTGATAGTACGCCCAGCTCCTCCGTGTGATCGCTCACCACTGCACGGAACGCTTTCTCCTGAATGGCAGCCAGGATGTGACATTTGGTGTGGTAAGCGGAAGCACCTCCCGCAACGATGTAGTATCCACGACCCTGTTTTGGAGATGGAAGCAAAAGAGTCACTTGCCGAGTACACCATTATAAGACTCTTGACACTTACCTTGAAGATCGGATCATGCAGTCCACCCAGTCCCGACTCTACGATGCTAACCGTGACATCTCCTTCCACGCCACCCCGTTTGTTTAGAGCGCAAGTATAGATGGTCTTGTTAATCGGTTTATCCAAGTTGGCGGTGAAGATCCATTCGGCGGCCTCCTTTGCCTGGCTGCCGGTAAGGAAGAGTTTGCAGAAGTAGCTCAAATTGAACAGTGCAGCATCATGGCGGCAGGTGAGTGCTTCCTCGCCGATCAAGTCGTGATGCTCCGAAAATCCAAACGTGTAGTCTCCCTTCAGTGCTTCCTCGTAGTGTGTGTTGGCGTTCTTGGGATGATCGTAGTAGCCATACCAATCGTACGGTTGCACCACAACCGTCTCATCCGGTAGGAAGTATCCCGGCCGTTCCCAGCCATGTCTTTCCTCCATAACTGCCCCATATTGTATCATTTGCTTGTGGAATGGATCGACGGTAAAGTTTCGCCCGGCCAGTGGCTCATCGTGCGGGAAAACGATGCT-ATAGTTCTTCGTGTACGCCTC-GT-GCTTCGCTCCGTCGCCCAGTTCAGTGCCTTCTTCTGTTTGGGTGTGAAACGTCGCACA-TCGTACGCAAACATGTGCCGGTCGGGCCGATCGTGTATGATCCACTGTGCCAGCTGTTCCGCACAGCCGCCACCCAGCATCATGCCGGCCGAGTTGTACCCAACGCTGTGAAACAGCCCACTGACCGTCGGGTCCGGTCCCATCAGCGGTTTGTGGTCGGGCGTGAACGATTCCGGTCCGCAGATCGTGCTCTTGATCCCCGCACTGCCAAACGCCGGGCACAGCTTCACCGCACCCTGGATGTGCGTATCGAACACCGAGTAGTCGAGGTCGTACAGCCCAAAGTGGAAGTCACCCGGCACCCGGTTCAGCATGATCGGATTGTTCTCGTACCCGCCCATGCAGATCGATTTGCCCTGGATGCGGAAGTACAGCGAAAAGTCGTGATCGCGCACATTTGGCAGCATCTGATGGATGGTGTCCATCGTTTCCGACACGACGTACGCGTGCTTCATCGGTATCAGGGGCAGAAAGACGCCGAGCGGTTCGATCAGATCCCGGCCGGACACGCCCGTCGCGTTCACGACCGTGTTCGTGCGGATCGTACCCTTGTTCGTGAGCACACCGCGCACGTCCTTCATGCCGAGCAGGTTCTCGCCGGTAATGATCTGCGACACGGTACAGTCCTCGACCACGAGCCCCCCATTAGCGGTGGCACCCTTCGTCAGGGCGGTACACATCATGGCCGGATCGACGACACCGTCACCGGGCGAGTAGAGGGCACCGGTGAAGGAGGTCGGGTCTAGCGGTGGGAACAGCTTCTGGGCCTGTTCCGGCCCGACGATGTGTGACTCGACCCACGCGTCCGCGG]
[+] EMBL CNS0958V [CTCTAGCCCCACCAAAAGATTTATTTGTATATTCCCAGCATCCGTTCACCTTTCGGATCAAACGGACTTCTCAAATGGCAATCGGCATCGTACAGCTTGCCCATCACCTCGATCTGGTAGTGGCCCGACTGCAGGAACTGGTTCGTGATTGGGCTACTGTCTGCGCGTTGCACGTACGCCTGGCCGATCGGTTTCTGGAGCGTGTAACCATACTCTCCGCGCCGCAGATGTCCCACAATCTCTCCGTCCCGATAGACCGCTTCCAATCCCCAGATTGGTACCTGTTCCCGCAGCGTAAAGAATGCCAACCGCCGACTGACGCCATTTTCGCGCTGTCGTTCCACAATTTCCTTGCCCTGATACTCGCCCTCCTTTCGGCACACAAAGCCCAGGAAGGCCTCGATCGGCGTGTCGTCCGACCGGAGATCCGATCCCCACAGATGGTAGGACTTCTCGCTGCTGAGCGAGTACAGTGCCCGGTAGCCCGCGTTTCGCAGACTCTCCTTATATCCAGCCTTCATTAGCGCGTTGTACACATCGTTACAGCTTTCCTCGGGAATGTGCAGCTCGTAGCCCAGCTCGCCGACGAAGCTGACGCGCAACACACGCACATGGCAGCTGTAGTGCGGATTGATCTTAATCGTCAGTATGGCGGTAGAGTTCATCGGCAACAGCTTCTCGTTCGATAGATCAAAGTCGGTGATCTTCTGCAGAATTTCGCGGCTTTTCGGTCCCTGGAGTGATAGTACGCCCAGCTCCTCCGTGTGATCGCTCACCACTGCACGGAACGCTTTCTCCTGAATGGCAGCCAGGATGTGACATTTGGTGTGGTAAGCGGAAGCACCTCCCGCAACGATGTAGTATCCACGACCCTGTTTTGGAGATGGAAGCAAAAGAGTCACTTGCCGAGTACA ]
[+] EMBL CNS09ES8 [ AAAAGATTTATTTGTATATTCCCAGCATCCGTTCACCTTTCGGATCAAACGGACTTCTCAAATGGCAATCGGCATCGTACAGCTTGCCCATCACCTCGATCTGGTAGTGGCCCGACTGCAGGAACTGGTTCGTGATTGGGCTACTGTCTGCGCGTTGCACGTACGCCTGGCCGATCGGTTTCTGGAGCGTGTAACCATACTCTCCGCGCCGCAGATGTCCCACAATCTCTCCGTCCCGATAGACCGCTTCCAATCCCCAGATTGGTACCTGTTCCCGCAGCGTAAAGAATGCCAACCGCCGACTGACGCCATTTTCGCGCTGTCGTTCCACAATTTCCTTGCCCTGATACTCGCCCTCCTTTCGGCACACAAAGCCCAGGTTGGCCTCGATCGGCGTGTCGTCCGACCGGAGATCCGATCCCCACAGATGGTAGGACTTCTCGCTGCTGAGCGAGTACAGTGCCCGGTAGCCCGCGTTTCGCAGACTCTCCTTATATCCAGCCTTCATTAGCGCGTTGTACACATCGTTACAGCTTTCCTCGGGAATGTGCAGCTCGTAGCCCAGCTCGCCGACGAAGCTGACGCGCAACACACGCACATGGCAGCTGTAGTGCGGATTGATCTTAATCGTCAGTATGGCGGTAGAGTTCATCGGCAACAGCTTCTCGTTCGATAGATCAAAGTCGGTGATCTTCTGCAGAATTTCGCGGCTTTTCGGTCCCTGGAGTTATAGTACGCCCAGCTCCTCCGTGTGATCGCTCACCACTGCACGGAACGCTTTCTCCTGAATGGCAGCCAGGATGTGACACTGGGTGTGGTAAGCGGAA CACCTCCCGCAACGATGTAG ]
[-] EMBL CNS09ES7 [ TTCGCGGCTTTTCGGTCCCTGGAGTGATAGTACGCCCAGCTCCTCCGTGTGATCGCTCACCACTGCACGGAACGCTTTCTCCTGAATGGCAGCCAGGATGTGACATTTGGTGTGGTAAGCGGAAGCACCTCCCGCAACGATGTAGTATCCACGACCCTGTTTTGGAGATGGAAGCAAAAGAGTCACTTGCCGAGTACACCATTATAAGACTCTTGACACTTACCTTGAAGATCGGATCATGCAGTCCACCCAGTCCCGACTCTACGATGCTAACCGTGACATCTCCTTCCACGCCACCCCGTTTGTTTAGAGCGCAAGTATAGATGGTCTTGTTAATCGGTTTATCCAAGTTGGCGGTGAAGATCCATTCGGCGGCCTCCTTTGCCTGGCTGCCGGTAAGGAAGAGTTTGCAGAAGTAGCTCAAATTGAACAGTGCAGCATCATGGCGGCAGGTGAGTGCTTCCTCGCCGATCAAGTCGTGATGCTCCGAAAATCCAAACGTGTAGTCTCCCTTCAGTGCTTCCTCGTAGTGTGTGTTGGCGTTCTTGGGATGATCGTAGTAGCCATACCAATCGTACGGTTGCACCACAACCGTCTCATCCGGTAGGAAGTATCCCGGCCGTTCCCAGCCATGTCTTTCCTCCATAACTGCCCCATATTGTATCATTTGCTTGTGGAATGGATCGACGGTAAAGTTTCGCCCGGCCAGTGGCTCATCGTGCGGGAAAACGATGCT ATAGTTCTTCGTGTACGCCTC GT GCTTCGCTCCGTCGCCCAGTTCAGTGCCTTCTTCTGTTTGGGTGTGAAACGTCGCACA TCGTACGCAAACATGTGCCGGTCGGGCCGATCGTGTATGATCCACTGTGCC ]
[-] EMBL CNS0958U [ ATGCTAACGGTGACATCTCCTTCCACGCCACCCCGTTTGTTTAGAGCGCAAGTATAGATGGTCTTGTTAATCGGTTTATCCAAGTTGGCGGTGAAGATCCATTCGGCGGCCTCCTTTGCCTGGCTGCCGGTAAGGAAGAGTTTGCAGAAGTAGCTCAAATTGAACAGTGCAGCATCATGGCGGCAGGTGAGTGCTGCCTCGCCGATCAAGTCGTGATGTTTTTAAAATCCAAACGTGTAGTCTCCCTTCAGTGCTTCCTCGTAGTGTGTGTTGGCGTTCTTGGGATGATCGTAGTAGCCATACCAATCGTACGGTTGCACCACAACCGTCTCATCCGGTAGGAAGTATCCCGGCCGTTCCCAGCCATGTCTTTCCTCCATAACTGCCCCATATTGTATCATTTGCTTGTGGAATGGATCGACGGTAAAGTTTCGCCCGGCCAGTGGCTCATCGTGCGGGAAAACGATGCT ATAGTTCTTCGTGTACGCCTCGGT GCTTCGCTCCGTCGCCCAGTTCAGTGCCTTCTTCTGTTTGGGTGTGAAACGTCGCACA TCGTACGCAAACATGTCCCGGTCGGGCC ]
[-] EMBL BM610120 [ CAGTGGCTCATCGTGCGGGAAAACGATGCTAATAGTTCTTCGTGTACGCCTC GTGGCTTCGCTCCGTCGCCCAGTTCAGTGCCTTCTTCTGTTTGGGTGTGAAACGTCGCACATTCGTACGCAAACATGTGCCGGTCGGGCCGATCGTGTATGATCCACTGTGCCAGCTGTTCCGCACAGCCGCCACCCAGCATCATGCCGGCCGAGTTGTACCCAACGCTGTGAAACAGCCCACTGACCGTCGGGTCCGGTCCCATCAGCGGTTTGTGGTCGGGCGTGAACGATTCCGGTCCGCAGATCGTGCTCTTGATCCCCGCACTGCCAAACGCCGGGCACAGCTTCACCGCACCCTGGATGTGCGTATCGAACACCGAGTAGTCGAGGTCGTACAGCCCAAAGTGGAAGTCACCCGGCACCCGGTTCAGCATGATCGGATTGTTCTCGTACCCGCCCATGCAGATCGATTTGCCCTGGATGCGGAAGTACAGCGAAAAGTCGTGATCGCGCACATTTGGCAGCATCTGATGGATGGTGTCCATCGTTTCCGACACGACGTACGCGTGCTTCATCGGTATCAGGGGCAGAAAGACGCCGAGCGGTTCGATCAGATCCCGGCCGG ]
[-] EMBL BM623143 [ TGATCGGATTGTTCTCGTACCCGCCCATGCAGATCGATTTGCCCTGGATGCGGAAGTACAGCGAAAAGTCGTGATCGCGCACATTTGGCAGCATCTGATGGATGGTGTCCATCGTTTCCGACACGACGTACGCGTGCTTCATCGGTATCAGGGGCAGAAAGACGCCGAGCGGTTCGATCAGATCCCGGCCCCACACGCCCGTCGCGTTCACGACCGTGTTCGTGCGGATCGTACCCTTGTTCGTGAGCACACCGCGCACGTCCTTCATGCCGAGCAGGTTCTCGCCGGTAATGATCTGCGACACGGTACAGTCCTCGACCACGAGCCCCCCATTAGCGGTGGCACCCTTCGTCAGGGCGGTACACATCATGGCCGGATCGACGACACCGTCACCGGGCGAGTAGAGGGCACCGGTGAAGGAGGTCGGGTCTAGCGGTGGGAACAGCTTCTGGGCCTGTTCCGGCCCGACGATGTGTGACTCGACCCACGCGTCCGCGG]
consensusID : consensus_8339#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 898 fasta sequence
[TTATGGCGTGCGTNTATCTGAGCAGCTGGGCCTNGACCCCCTAGGGGGGGTAAATGCCTTTAGTCCCCGGTGGGGGGGNTATTGAGATCCGCGCCGTCACTGNTTTGTGGATTGTGTGTGCTGCTGGCCCGTCGCCGGGGCTGTTTGATCGTGGGCGCGCTCGGGTGACTTGTATATGNAGGAATGNGGGGAGAACAGTTAGCTGGNTGNGAGGCGTCCNTCTACCAATAGGTGTGCNCGCCACCACTCCGTGGGTNCNTCCGTCTCGCGGGNGGTATGGTTATCCCCTTNTGGGGTAAGTGGCTCTTTAGCCGCACCAAGTGTTGNGGTTGGGCGNTCGTNTTCGANCGGGGGGTGNNCGGGCGTAGTGCGCGTGGTGTCGGNGGTCATCTTGGCACGTGGGGAAAAGGTGTTGCGTCGTCGTGTTGAAGCGCCCCCGATATAAAGTGTTTGGCCTGGTTGCCGTNCGCTGTGTNTAAGGGCGGCCCAGTGTACGTTTGGGGAAAGCTTAANGCCTTGCCGGGCNCAGCGTCCACANTGTTGGGCAGCTAACCAAAGGCCCCAGGGTTGGGCACTCCGATCCGGCAGTGTTCGTGCCGTACACAGGAGGATCACGAATCAGCCCACACCAAGGAATGGTGTAGCCCGTGTGCGTCGCNTGCTGAAGCAGAGGTACAAGGTGCACCAGGTAGCCCGCAGTTTCAGCAAGACTCGTCCCTTGTAGTCACATGCACGTGTCATCAGCAGCGTTGTACACATCGTTACAGCTTTCCTCGGGAATGTGCAGCTCGTAGCCCAGCTCGCGCGACGAAGCTGACGCGCAACACACGCACATGGCAGCTGTAGTGCGGATNATCTTAATCGTCAGTATGCGTATAAACTCGTGGGGATTCTGCCT]
[-] EMBL AL930885 [TTATGGCGTGCGTNTATCTGAGCAGCTGGGCCTNGACCCCCTAGGGGGGGTAAATGCCTTTAGTCCCCGGTGGGGGGGNTATTGAGATCCGCGCCGTCACTGNTTTGTGGATTGTGTGTGCTGCTGGCCCGTCGCCGGGGCTGTTTGATCGTGGGCGCGCTCGGGTGACTTGTATATGNAGGAATGNGGGGAGAACAGTTAGCTGGNTGNGAGGCGTCCNTCTACCAATAGGTGTGCNCGCCACCACTCCGTGGGTNCNTCCGTCTCGCGGGNGGTATGGTTATCCCCTTNTGGGGTAAGTGGCTCTTTAGCCGCACCAAGTGTTGNGGTTGGGCGNTCGTNTTCGANCGGGGGGTGNNCGGGCGTAGTGCGCGTGGTGTCGGNGGTCATCTTGGCACGTGGGGAAAAGGTGTTGCGTCGTCGTGTTGAAGCGCCCCCGATATAAAGTGTTTGGCCTGGTTGCCGTNCGCTGTGTNTAAGGGCGGCCCAGTGTACGTTTGGGGAAAGCTTAANGCCTTGCCGGGCNCAGCGTCCACANTGTTGGGCAGCTAACCAAAGGCCCCAGGGTTGGGCACTCCGATCCGGCAGTGTTCGTGCCGTACACAGGAGGATCACGAATCAGCCCACACCAAGGAATGGTGTAGCCCGTGTGCGTCGCNTGCTGAAGCAGAGGTACAAGGTGCACCAGGTAGCCCGCAGTTTCAGCAAGACTCGTCCCTTGTAGTCACATGCACGTGTCATCAGCAGCGTTGTACACATCGTTACAGCTTTCCTCGGGAATGTGCAGCTCGTAGCCCAGCTCGCGCGACGAAGCTGACGCGCAACACACGCACATGGCAGCTGTAGTGCGGATNATCTTAATCGTCAGTATGCGTATAAACTCGTGGGGATTCTGCCT]
consensusID : consensus_8339#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 667 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGTCTGGAACGGGCCGGTCGCAACGAAGAATTGTGTGGCACACAGCATTGAGATTCATTCAATCATAATTAAGCGTAAAAAGAGTAAGAGTTGAAAGTTCAGCAAACACATTTGGTTTGGTGAAGTTCAAATTGTGAAGCAAGCGTGAAAATGTTACGACTGAGAGCGAACGCGGTGGCAAAGTTTAAAAGTCACATTGCGGGTGGCGAGCAACGTGCCATCACTGCAGCGACCTCTGCACGCAAATATTCCACTGAAAGCCCACTGCCCGAAAGTGCCGATGTAGTGATCATAGGTGGCGGTTCGGCCGGTTGCAACACACTGTACCAGCTGGCAAAGCGTGGCGTCCGGGCGGTGCTGCTCGAAAAGTCCAAACTAACGGCCGGTACGACCTGGCACACGGCCGGCTTAGTATGGCGCCTACGACCGAACGATGTCGAAATTCGGCTGCTAGCGGCAACGCGCGATCTGCTCATGAGCCTCGAGGAGGAGACGGGCCACAATTCGGGCTGGATTAACAACGGCGGGCTGTTCATTTCGCACTCCCCCGAGCGGTTGGATGAGTACAGCCGGTTGGCTACGCTCGGCAAATGCTTTGGCATCGAGTCACACATCGTCGGGCCGGAACAGGCCCAGAAGCT]
[+] EMBL BM622759 [CCGCCCACGCGTCCGCCCACGCGTCCGGTCTGGAACGGGCCGGTCGCAACGAAGAATTGTGTGGCACACAGCATTGAGATTCATTCAATCATAATTAAGCGTAAAAAGAGTAAGAGTTGAAAGTTCAGCAAACACATTTGGTTTGGTGAAGTTCAAATTGTGAAGCAAGCGTGAAAATGTTACGACTGAGAGCGAACGCGGTGGCAAAGTTTAAAAGTCACATTGCGGGTGGCGAGCAACGTGCCATCACTGCAGCGACCTCTGCACGCAAATATTCCACTGAAAGCCCACTGCCCGAAAGTGCCGATGTAGTGATCATAGGTGGCGGTTCGGCCGGTTGCAACACACTGTACCAGCTGGCAAAGCGTGGCGTCCGGGCGGTGCTGCTCGAAAAGTCCAAACTAACGGCCGGTACGACCTGGCACACGGCCGGCTTAGTATGGCGCCTACGACCGAACGATGTCGAAATTCGGCTGCTAGCGGCAACGCGCGATCTGCTCATGAGCCTCGAGGAGGAGACGGGCCACAATTCGGGCTGGATTAACAACGGCGGGCTGTTCATTTCGCACTCCCCCGAGCGGTTGGATGAGTACAGCCGGTTGGCTACGCTCGGCAAATGCTTTGGCATCGAGTCACACATCGTCGGGCCGGAACAGGCCCAGAAGCT]
consensusID : consensus_8339#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 656 fasta sequence
[TCNGATCCCCACAGATGGTAGCCCTTCTCGCTGCTGAGCGAGTACAGTGCCCGGTAGCCCGCGTTTCGCAGACTCTCCTNGTATCCTGCCTTCATCAGCGCATTGTACACATCATTACAGCTTTCCTCGGGTATGTGCAGCTCGTAGCCCAGCTCGCCGACGAAGCTGACGCGCAACACACGCACATGGCAGCTGTAGTGCGGATTGATCTTAATCGTCAGTATGGCGGTAGAGTTCATCGGCAACAGCTTCTCGTTCGATAGATCAAAGTCGGTGATCTTCTGCAGAATTTCGCGGCTTTTCGGTCCCTGAAGTGATAGTACGCCCAGCTCCTCCGTGTGATCGCTCACCACTGCCCGGAACGCTTTCTCCTGAATGGCGGCCAGGATGTGACATTTAGTGTGGTAAGCGGAAGCACCACCCGCAACGATGTAGTACCCACGACCCTTGAAGATCGGATCATGCAGTCCACCCAGTCCCGACTCTACGATGCTAACCGTGACATCTCCTTCCACGCCACCCCGCTTGTTTAGAGCGCAAGTATAGATGGTCTTGTTGATCGGTTTATCCAAGTTGGCGGTGAAGATCCATTCGGCGGCCTCCTTTGCCTGACTGCCGGTAAGGAAGAGTTTGCAGAAGTAGCTCAAATTGAACAG]
[-] EMBL BX620330 [TCNGATCCCCACAGATGGTAGCCCTTCTCGCTGCTGAGCGAGTACAGTGCCCGGTAGCCCGCGTTTCGCAGACTCTCCTNGTATCCTGCCTTCATCAGCGCATTGTACACATCATTACAGCTTTCCTCGGGTATGTGCAGCTCGTAGCCCAGCTCGCCGACGAAGCTGACGCGCAACACACGCACATGGCAGCTGTAGTGCGGATTGATCTTAATCGTCAGTATGGCGGTAGAGTTCATCGGCAACAGCTTCTCGTTCGATAGATCAAAGTCGGTGATCTTCTGCAGAATTTCGCGGCTTTTCGGTCCCTGAAGTGATAGTACGCCCAGCTCCTCCGTGTGATCGCTCACCACTGCCCGGAACGCTTTCTCCTGAATGGCGGCCAGGATGTGACATTTAGTGTGGTAAGCGGAAGCACCACCCGCAACGATGTAGTACCCACGACCCTTGAAGATCGGATCATGCAGTCCACCCAGTCCCGACTCTACGATGCTAACCGTGACATCTCCTTCCACGCCACCCCGCTTGTTTAGAGCGCAAGTATAGATGGTCTTGTTGATCGGTTTATCCAAGTTGGCGGTGAAGATCCATTCGGCGGCCTCCTTTGCCTGACTGCCGGTAAGGAAGAGTTTGCAGAAGTAGCTCAAATTGAACAG]
consensusID : consensus_8339#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 515 fasta sequence
[TGCGCGCTGCACGTACGCCTGGCCGATCGGTTTCTGGAGCGTGTAACCATACTCTCCGCGCCGCAGATGTCCCACAATCTCTCCGTCCCGATAGACCGCTTCCAAGCCCCAGATCGGTACCTGTTCCCGTAGCGTAAAGAATGCCAACCGCCGACTGACTCCATTTTCGCGCTGCCGATCTACAATCTCCTTACCCTGATACTCGCCCTCCTTTCGGCAACAGCTTCTCGTTCGATAGATCAAAGTCGGTGATCTTCTGCAGAATTTCGCGGCTTTTCGGTCCCTGGAGTGATAGTACGCCCAGCTCCTCCGTGTGATCGCTCACCACTGCCCGGAACGCTTTCTCCTGAATGGCGGCCAGGATGTGACATTTAGTGTGGTAAGCGGAAGCACCACCCGCAACGATGTAGGACCCACGACCCTTGAAGATCGGATCATGCAGTCCACCCAGTCCCGACTCTACGATGCTAACCGTGACATCTCCTTCCACGCCACCCCGCTTGTTTAGAGCGCAA]
[-] EMBL BX610212 [TGCGCGCTGCACGTACGCCTGGCCGATCGGTTTCTGGAGCGTGTAACCATACTCTCCGCGCCGCAGATGTCCCACAATCTCTCCGTCCCGATAGACCGCTTCCAAGCCCCAGATCGGTACCTGTTCCCGTAGCGTAAAGAATGCCAACCGCCGACTGACTCCATTTTCGCGCTGCCGATCTACAATCTCCTTACCCTGATACTCGCCCTCCTTTCGGCAACAGCTTCTCGTTCGATAGATCAAAGTCGGTGATCTTCTGCAGAATTTCGCGGCTTTTCGGTCCCTGGAGTGATAGTACGCCCAGCTCCTCCGTGTGATCGCTCACCACTGCCCGGAACGCTTTCTCCTGAATGGCGGCCAGGATGTGACATTTAGTGTGGTAAGCGGAAGCACCACCCGCAACGATGTAGGACCCACGACCCTTGAAGATCGGATCATGCAGTCCACCCAGTCCCGACTCTACGATGCTAACCGTGACATCTCCTTCCACGCCACCCCGCTTGTTTAGAGCGCAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8339#0 CTCTAGCCCCACCAAAAGATTTATTTGTATATTCCCAGCATCCGTTCACCTTTCGGATCA 60
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 AACGGACTTCTCAAATGGCAATCGGCATCGTACAGCTTGCCCATCACCTCGATCTGGTAG 120
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 TGGCCCGACTGCAGGAACTGGTTCGTGATTGGGCTACTGTCTGCGCGTTGCACGTACGCC 180
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 TGGCCGATCGGTTTCTGGAGCGTGTAACCATACTCTCCGCGCCGCAGATGTCCCACAATC 240
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 TCTCCGTCCCGATAGACCGCTTCCAATCCCCAGATTGGTACCTGTTCCCGCAGCGTAAAG 300
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 AATGCCAACCGCCGACTGACGCCATTTTCGCGCTGTCGTTCCACAATTTCCTTGCCCTGA 360
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 TACTCGCCCTCCTTTCGGCACACAAAGCCCAGGAAGGCCTCGATCGGCGTGTCGTCCGAC 420
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ----------------------------------------------------------TT 2
consensus_8339#2 -----------------------------------------------------------C 1
consensus_8339#0 CGGAGATCCGATCCCCACAGATGGTAGGACTTCTCGCTGCTGAGCGAGTACAGTGCCCGG 480
consensus_8339#3 ------TCNGATCCCCACAGATGGTAGCCCTTCTCGCTGCTGAGCGAGTACAGTGCCCGG 54
consensus_8339#4 ------TGCGCGCTGCACGTACGCCTGGCCGATCGGTTTCTG---GAGCGTGTAACC--A 49
consensus_8339#1 ATGGCGTGCGTNTATCTGAGCAGCTGGGCCTNGACCCCCTAGGGGGGGTAAATGCCTT-- 60
consensus_8339#2 CGCCCACGCGTCCGCCCACGCGTCCGGTCTGGAACGGGCCGGTCGCAACGAAGAATTGTG 61
* * * *
consensus_8339#0 TAGCCCGCGTTTCGCAGACTCTCCTTATATCCAGCCTTCATTAGCGCGTTGTACACATCG 540
consensus_8339#3 TAGCCCGCGTTTCGCAGACTCTCCTNGTATCCTGCCTTCATCAGCGCATTGTACACATCA 114
consensus_8339#4 TACTCTCCGCGCCGCAGATGTCCCACA-ATCTCTCCGTCCCGA--------TAGACCGCT 100
consensus_8339#1 TAGTCCCCGGTGGGGGGGNTATTGAGA-TCCGCGCCGTCACTGN-----TTTGTGGATTG 114
consensus_8339#2 TGGCACACAGCATTGAGATTC-------ATTCAATCATAATTAAG----CGTAAAAAGAG 110
* * * * * *
consensus_8339#0 TTACAGCTTTC-CTCGGGAATGTGCAGCTCGTAGCCCA--GCTCGCCGA-CGAAGCTGAC 596
consensus_8339#3 TTACAGCTTTC-CTCGGGTATGTGCAGCTCGTAGCCCA--GCTCGCCGA-CGAAGCTGAC 170
consensus_8339#4 TCCAAGCCCCA-GATCGGTACCTGTT-CCCGTAGCGTAAAGAATGCCAA-CC--GCCGAC 155
consensus_8339#1 TGTGTGCTGCT-GGCCCGTCGCCGGGGCTGTTTGATCGT-GGGCGCGCT-CG--GGTGAC 169
consensus_8339#2 TAAGAGTTGAAAGTTCAGCAAACACATTTGGTTTGGTGAAGTTCAAATTGTGAAGCAAGC 170
* * * * * * *
consensus_8339#0 GCGCAACACACGCACATGGCAGCTGTAGTGCGGATTGATCTTAAT-CGTCAGTATGGCGG 655
consensus_8339#3 GCGCAACACACGCACATGGCAGCTGTAGTGCGGATTGATCTTAAT-CGTCAGTATGGCGG 229
consensus_8339#4 TGACTCCATTTTCGCGCTGCCGATCTACAATCTCCTTACCCTGAT-ACTCGCCCT----- 209
consensus_8339#1 TTGTA-TATGNAGGAATGNGGGGAGAACAGTTAGCTGGNTGNGAGGCGTCCNTCTACCAA 228
consensus_8339#2 GTGAAAATGTTACGACTGAGAGCGAACGCGGTGGCAAAGTTTAAA-AGTCACATTGC--- 226
* * ** *
consensus_8339#0 TAGAGTTCATCGGCAACAGCTTCTCGTTCGATAGATCAAAGT-CGGTGATCTTCTGCAGA 714
consensus_8339#3 TAGAGTTCATCGGCAACAGCTTCTCGTTCGATAGATCAAAGT-CGGTGATCTTCTGCAGA 288
consensus_8339#4 -----CCTTTCGGCAACAGCTTCTCGTTCGATAGATCAAAGT-CGGTGATCTTCTGCAGA 263
consensus_8339#1 TAGGTGTGCNCGCCACCA----CTCCGTGGGTNCNTCCGTCT-CGCGGGNG----GTATG 279
consensus_8339#2 ---GGGTGGCGAGCAACGTGCCATCACTGCAGCGACCTCTGCACGCAAATATTCCACTGA 283
** * ** * * **
consensus_8339#0 ATTTCGCGGCTTTTCGGTCCCTGGAGTGATAGTACGCCCAGCTCCTCCGTGTGATCGCTC 774
consensus_8339#3 ATTTCGCGGCTTTTCGGTCCCTGAAGTGATAGTACGCCCAGCTCCTCCGTGTGATCGCTC 348
consensus_8339#4 ATTTCGCGGCTTTTCGGTCCCTGGAGTGATAGTACGCCCAGCTCCTCCGTGTGATCGCTC 323
consensus_8339#1 GTTATCCCCTTNTGGGGTAAGTGGCTCTTTAGCCGCACCAAGTGTTGNGGTTGGGCGNTC 339
consensus_8339#2 A--AGCCCACTGCCCGA-AAGTGCCGATGTAGTGATCATAGGTGG-CGGTTCGGCCGGTT 339
* * * ** *** * * * * ** *
consensus_8339#0 ACCACTGCACGGAACGCTTTCTCCTGAATGGCAGCCAGGATGT-GACATTTGGTGTGGTA 833
consensus_8339#3 ACCACTGCCCGGAACGCTTTCTCCTGAATGGCGGCCAGGATGT-GACATTTAGTGTGGTA 407
consensus_8339#4 ACCACTGCCCGGAACGCTTTCTCCTGAATGGCGGCCAGGATGT-GACATTTAGTGTGGTA 382
consensus_8339#1 GTNTTCGANCGGGGGG--TGNNCGGGCGTAGTGCGCGTGGTGTCGGNGGTCATCTTGGCA 397
consensus_8339#2 GCAACACACTGTACCAGCTGGCAAAGCGTGGCGTCCGGGCGGT-----GCTGCTCGAAAA 394
* * * * * * * ** *
consensus_8339#0 AGCGGAAGCACCTCCCGCAACGATGTAGTATCCACGACCCTGTTTTGGAGATGGAAGCAA 893
consensus_8339#3 AGCGGAAGCACCACCCGCAACGATGTAGTACCCACGACCCT------------------- 448
consensus_8339#4 AGCGGAAGCACCACCCGCAACGATGTAGGACCCACGACCCT------------------- 423
consensus_8339#1 CGTGGGGAAA--AGGTGTTGCGTCGTCGTGTTGAAGCGCCCCCGATATAAAGTGTTTGGC 455
consensus_8339#2 GTCCAAACTAACGGCCGGTACGACCTGGCACACGGCCGGCTTAG---------------- 438
* * ** * * *
consensus_8339#0 AAGAGTCACTTGCCGAGTACACCATTATAAGACTCTTGACACTTACCTTGAAGATCGGAT 953
consensus_8339#3 ------------------------------------------------TGAAGATCGGAT 460
consensus_8339#4 ------------------------------------------------TGAAGATCGGAT 435
consensus_8339#1 CTGGTTGCCGTNCGCTGTGTNTAAGGGCGGCCCAGTGTACGTTTGGGGAAAGCTTAANGC 515
consensus_8339#2 -------------------------------------TATGGCGCCTACGACCGAACGAT 461
*
consensus_8339#0 CATGCAGTCCACCCAGTCCCGACTCTACGAT-GCTAACCGTGACATCTCCTTCCACGCCA 1012
consensus_8339#3 CATGCAGTCCACCCAGTCCCGACTCTACGAT-GCTAACCGTGACATCTCCTTCCACGCCA 519
consensus_8339#4 CATGCAGTCCACCCAGTCCCGACTCTACGAT-GCTAACCGTGACATCTCCTTCCACGCCA 494
consensus_8339#1 CTTGCCGGGCNCAGCGTCCACANTGTTGGGCAGCTAACCA-AAGGCCCCAGGGTTGGGCA 574
consensus_8339#2 GTCGAAATTCGGCTGCTAGCGGCAACGCGCGATCTGCTCATGAGCCTCGAGGAGGAGACG 521
* * * * ** * * * *
consensus_8339#0 CCCCGTTTGTTTAGAGCGCAAG---TATAGATG-GTCTTGTTAATCGGTTTATCCAAGTT 1068
consensus_8339#3 CCCCGCTTGTTTAGAGCGCAAG---TATAGATG-GTCTTGTTGATCGGTTTATCCAAGTT 575
consensus_8339#4 CCCCGCTTGTTTAGAGCGCAA--------------------------------------- 515
consensus_8339#1 CTCCGATCCGGCAGTGTTCGTGCCGTACACAGGAGGATCACGAATCAGCCCACACCAAGG 634
consensus_8339#2 GGCCA--CAATTCGGGCTGGATTAACAACGGCGGGCTGTTCATTTCGCACTCCCCCGAGC 579
** * *
consensus_8339#0 GGCGGTGAAGATCCATTCGGCGGCCTCCTTTGCCTGGCTGCCGGTAAGGAAGAGTTTGCA 1128
consensus_8339#3 GGCGGTGAAGATCCATTCGGCGGCCTCCTTTGCCTGACTGCCGGTAAGGAAGAGTTTGCA 635
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 AATGGTGTAGCCCGTGTGCGTCGCNTGCTGAAGCAGAGGTACAAGGTGCACCAGGTAGCC 694
consensus_8339#2 GGTTGGATGAGTACAGCCGGTTGGCTACGCTCGGCAAATGCT--TTGGCATCGAGTCACA 637
consensus_8339#0 GAAGTAGCTCAAATTGAACAGTGCAGCATCATGGCGGCAGGTGAGTGCTTCCTCGCCGAT 1188
consensus_8339#3 GAAGTAGCTCAAATTGAACAG--------------------------------------- 656
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 C--GCAGTTTCAGCAAGACTCGTCCCTTGTAGTCACATGCACGTGTCATCAGCAGCGTTG 752
consensus_8339#2 C--ATCGTCGGGCCGGAACAGGCCCAGAAGCT---------------------------- 667
consensus_8339#0 CAAGTCGTGATGCTCCGAAAATCCAAACGTGTAGTCTCCCTTCAGTGCTTCCTCGTAGTG 1248
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 TACACATCGTTACAGCTTTCCTCGGGAATGTGCAGCTCGTAGCCCAGCTCGCGCGACGAA 812
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 TGTGTTGGCGTTCTTGGGATGATCGTAGTAGCCATACCAATCGTACGGTTGCACCACAAC 1308
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 GCTGACGCGCAACACACGCACATGGCAGCTGTAGTGCGGATNATCTTAATCGTCAGTATG 872
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 CGTCTCATCCGGTAGGAAGTATCCCGGCCGTTCCCAGCCATGTCTTTCCTCCATAACTGC 1368
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 CGTATAAACTCGTGGGGATTCTGCCT---------------------------------- 898
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 CCCATATTGTATCATTTGCTTGTGGAATGGATCGACGGTAAAGTTTCGCCCGGCCAGTGG 1428
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 CTCATCGTGCGGGAAAACGATGCTATAGTTCTTCGTGTACGCCTCGTGCTTCGCTCCGTC 1488
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 GCCCAGTTCAGTGCCTTCTTCTGTTTGGGTGTGAAACGTCGCACATCGTACGCAAACATG 1548
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 TGCCGGTCGGGCCGATCGTGTATGATCCACTGTGCCAGCTGTTCCGCACAGCCGCCACCC 1608
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 AGCATCATGCCGGCCGAGTTGTACCCAACGCTGTGAAACAGCCCACTGACCGTCGGGTCC 1668
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 GGTCCCATCAGCGGTTTGTGGTCGGGCGTGAACGATTCCGGTCCGCAGATCGTGCTCTTG 1728
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 ATCCCCGCACTGCCAAACGCCGGGCACAGCTTCACCGCACCCTGGATGTGCGTATCGAAC 1788
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 ACCGAGTAGTCGAGGTCGTACAGCCCAAAGTGGAAGTCACCCGGCACCCGGTTCAGCATG 1848
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 ATCGGATTGTTCTCGTACCCGCCCATGCAGATCGATTTGCCCTGGATGCGGAAGTACAGC 1908
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 GAAAAGTCGTGATCGCGCACATTTGGCAGCATCTGATGGATGGTGTCCATCGTTTCCGAC 1968
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 ACGACGTACGCGTGCTTCATCGGTATCAGGGGCAGAAAGACGCCGAGCGGTTCGATCAGA 2028
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 TCCCGGCCGGACACGCCCGTCGCGTTCACGACCGTGTTCGTGCGGATCGTACCCTTGTTC 2088
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 GTGAGCACACCGCGCACGTCCTTCATGCCGAGCAGGTTCTCGCCGGTAATGATCTGCGAC 2148
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 ACGGTACAGTCCTCGACCACGAGCCCCCCATTAGCGGTGGCACCCTTCGTCAGGGCGGTA 2208
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 CACATCATGGCCGGATCGACGACACCGTCACCGGGCGAGTAGAGGGCACCGGTGAAGGAG 2268
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 GTCGGGTCTAGCGGTGGGAACAGCTTCTGGGCCTGTTCCGGCCCGACGATGTGTGACTCG 2328
consensus_8339#3 ------------------------------------------------------------
consensus_8339#4 ------------------------------------------------------------
consensus_8339#1 ------------------------------------------------------------
consensus_8339#2 ------------------------------------------------------------
consensus_8339#0 ACCCACGCGTCCGCGG 2344
consensus_8339#3 ----------------
consensus_8339#4 ----------------
consensus_8339#1 ----------------
consensus_8339#2 ----------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||