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Anopheles gambiae
cluster # 8367 cluster # 8367       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8367#0 length = 1337 sequences # 6  
consensus_8367#1 length = 688 sequences # 2  
consensus_8367#2 length = 600 sequences # 1  
consensus_8367#3 length = 511 sequences # 1  

consensusID : consensus_8367#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1337
fasta sequence
                              [CCGGCGGAAAGTTTCAATTTGTCGTCGTTAAGTGAGGAAAGAATTCATTCTCCTCCCAGCACGAAGTATTAGGACGGTTCGCCCGGGAAGCTACAGGCGCTAGACATCGCAAACGAACGGAGCGCAATCATTTGTGATATTAATATTTACCTATTTATTACTACTGCAAAGCTCTACTGGTCTAACTGGCCTTTAGTGAGACGCGACGGTGTTTGATTATTGGCAGTGTGTTGTGAAGTTAGCGTGAAGTGATATTGAACGCAATCGGTGACTAATTGTGTGACTAATAAACAAACAAAAAACCATTCCAAAATCATGGAGTTCCGCTTCAACATGCATCCCCTGTTCCGGGCACGGATTGTACGGATAAATAACTCGCTGCTCCCGACCGGCTTCGTTGCACAGTCCCGCCGTGTTGCACTCGATGCCACGGCACAGATTTCGGAGATCATTAACACGATCGGCTCGATGTCGGCACAGGCACAGGGCCTTTCCGTTCCGGTAACGACCGCCCAAAAGCTGCGCAACTCGGACCATCACATCTATCTGATGTTTGAATCGAACGACAGAAATGGTCTCGTCGTCGGCATACTGAAGGTGGGCCGCAAATCGCTGTACGTGTTTGATCCGTCCGGCGAAACGGTCAACGTGACGGCACCGTGTGTGCTCGACTTTTACGTGCACGAGTCCCGCCAGCGCGGCGGTCTTGGCCGCGAGCTGTTCGAGCATATGCTGCGGGAGGAAAACATACAGCCGGACGAGCTGGCGATCGATCGGCCGTCCGAGAAGTTGCTCGGTTTCCTGCAGAAGCATTACGGACTGTCCAAGAAGATTCCACAGATGAACAACTTTGTCGTGTACGAAGGCTTCTTTGCCAGCAAGGCCCAAAACTCGACCGACATCGATGGTCGTCGCATGCACATCACTGCTAGATAATTCACAACAGCCCCACAACAGTTTCAACGGAACCGAACAGCAATTTTACCT-AAAAAAACTCTCACCCAAAGGCCGGAGGTCACACTGATTGGCTTTGTAATGNATGTCTTTGGGTTGTCCCTACCC-NCCCCGATGATGGTTCGTGTATTTAAAATTCGTCTAGGTCTTTGCGAAATCTAGCCACACTGCGATACCTGCGTACTCTAATATCGTGTTAAGCACCAGTAGCAATTAATGTACCGTGTCTAAATTAAATCTTCCCCGGTCGAAGCAGGTTTTACTATAAGTTTGTACGGCCCTTTGCCCCTAATATTAAGCTCACTGTATTCGTTCGTCGTCTTCGGATCTTCTTTCAAGAAAGTTTATAAAATTGTTGAAAGTAATTTATTAAACTCCCAAGT]

[+] EMBL BM586358             [CCGGCGGAAAGTTTCAATTTGTCGTCGTTAAGTGAGGAAAGAATTCATTCTCCTCCCAGCACGAAGTATTAGGACGGTTCGCCCGGGAAGCTACAGGCGCTAGACATCGCAAACGAACGGAGCGCAATCATTTGTGATATTAATATTTACCTATTTATTACTACTGCAAAGCTCTACTGGTCTAACTGGCCTTTAGTGAGACGCGACGGTGTTTGATTATTGGCAGTGTGTTGTGAAGTTAGCGTGAAGTGATATTGAACGCAATCGGTGACTAATTGTGTGACTAATAAACAAACAAAAAACCATTCCAAAATCATGGAGTTCCGCTTCAACATGCATCCCCTGTTCCGGGCACGGATTGTACGGATAAATAACTCGCTGCTCCCGACCGGCTTCGTTGCACAGTCCCGCCGTGTTGCACTCGATGCCACGGCACAGATTTCGGAGATCATTAACACGATCGGCTCGATGTCGGCACAGGCACAGGGCCTTTCCGTTCCGGTAACGACCGCCCAAAAGCTGCGCAACTCGGACCATCACATCTATCTGATGTTTGAATCGAACGACAGAAATGGTCTCGTCGTCGGCATACTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX626899             [         AGTTTCAATTTGTCGTCGTTAAGTGAGGAAAGAATTCATTCTCCTCCCAGCACGAAGTATTAGGACGGTTCGCCCGGGAAGCTACAGGCGCTAGACATCGCAAACGAACGGAGCGCAATCATTTGTGATATTAATATTTACCTATTTATTACTACTGCAAAGCTCTACTGGTCTAACTGGCCTTTAGTGAGACGCGACGGTGTTTGATTATTGGCAGTGTGTTGTGAAGTTAGCGTGAAGTGATATTGAACGCAATCGGTGACTAATTGTGTGACTAATAAACAAACAAAAAACCATTCCAAAATCATGGAGTTCCGCTTCAACATGCATCCCCTGTTCCGGGCACGGATTGTACGGATAAATAACTCGCTGCTCCCGACCGGCTTCGTTGCACAGTCCCGCCGTGTTGCACTCGATGCCACGGCACAGATTTCGGAGATCATTAACACGATCGGCTCGATGTCGGCACAGGCACAGGGCCTTTCCGTTCCGGTAACGACCGCCCAAAAGCTGCGCAACTCGGACCATCACATCTATCTGATGTTTGAATCGAACGACAGAAATGGTCTCGTCGTCGGCATACTGAAGGTGGGCCGCAAATCGCTGTACGTGTTTGATCCGTCCNGCGAAACGGTCAACGTGACGGCACCGTGTGTGCTCGACTTTTACGTGCACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX621403             [                                                                                                                                                                                                                                                      AAGTGATATTGAACGCAATCGGTGACTAATTGTGTGACTAATAAACAAACAAAAAACCATTCCAAAATCATGGAGTTCCGCTTCAACATGCATCCCCTGTTCCGGGCACGGATTGTACGGATAAATAACTCGCTGCTCCCGACCGGCTTCGTTGCACAGTCCCGCCGTGTTGCACTCGATGCCACGGCACAGATTTCGGAGATCATTAACACGATCGGCTCGATGTCGGCACAGGCACAGGGCCTTTCCGTTCCGGTAACGACCGCCCAAAAGCTGCGCAACTCGGACCATCACATCTATCTGATGTTTGAATCGAACGACAGAAATGGTCTCGTCGTCGGCATACTGAAGGTGGGCCGCAAATCGCTGTACGTG TTGATCCGTCCGGCGAAACGGTCAACGTGACGGCACCGTGTGTGCTCGACTTTTACGTGCACGAGTCCCGCCAGCGCGGCGGTCTTGGCCGCGAGCTGTTCGAGCATATGCTGCGGGAGGAAAACATACAGCCGGACGAGCTGGCGATCGATCGGCCGTCCGAGAAGTTGCTCGGTTTCCTGCAGAAGCATTACGGACTGTCCAAGAAGATTCCACAGATGAACAACTTTGTCGTGTACGAAGGCTTCTTTGCCAGCAAGGCCCAAAACTCGACCGACATCGATGGTCGTCGCATGCACATCACTGCTAGATAATTCACAACAGCCCCACAACAGTTTCAACGGAACCGAACAGCAATTTTACCTAAAAAAAACTCTCACCCAAAGGCCGGAGGTCACACTGATTGGCTTTGTAATGNATGTCTTTGGGTTGTCCCTACCC NCCCCGATGAT                                                                                                                                                                                                                                                                        ]
[+] EMBL BX628206             [                                                                                                                                                                                                                                                                                                                         TCATGGAGTTCCGCTTCAACATGCATCCCCTGTTCCGGGCACGGATTGTACGGATAAATAACTCGCTGCTCCCGACCGGCTTCGTTGCACAGTCCCGCCGTGTTGCACTCGATGCCACGGCACAGATTTCGGAGATCATTAACACGATCGGCTCGATGTCGGCACAGGCACAGGGCCTTTCCGTTCCGGTAACGACCGCCCAAAAGCTGCGCAACTCGGACCATCACATCTATCTGATGTTTGAATCGAACGACAGAAATGGTCTCGTCGTCGGCATACTGAAGGTGGGCCGCAAATCGCTGTACGTGTTTGATCCGTCCGGCGAAACGGTCAACGTGACGGCACCGTGTGTGCTCGACTTTTACGTGCACGAGTCCCGCCAGCGCGGCGGTCTTGGCCGCGAGCTGTTCGAGCATATGCTGCGGGAGGAAAACATACAGCCGGACGAGCTGGCGATCGATCGGCCGTCCGAGAAGTTGCTCGGTTTCCTGCAGAAGCATTACGGACTGTCCAAGAAGATTCCACAGATGAACAACTTTGTCGTGTACGAAGGCTTCTTTGCCAGCAAGGCCCAAAACTCGACCGACATCGATGGTCGTCGCATGCACATCACTGCTAGtcctaaca                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM596007             [                                                                                                                                                                                                                                                                                                                                                                                            ccgCCCGACCGGCTTCGTTGCACAGTCCCGCCGTGTTGCACTCGATGCCACGGCACAGATTTCGGAGATCATTAACACGATCGGCTCGATGTCGGCACAGGCACAGGGCCTTTCCGTTCCGGTAACGACCGCCCAAAAGCTGCGCAACTCGGACCATCACATCTATCTGATGTTTGAATCGAACGACAGAAATGGTCTCGTCGTCGGCATACTGAAGGTGGGCCGCAAATCGCTGTACGTGTTTGATCCGTCCGGCGAAACGGTCAACGTGACGGCACCGTGTGTGCTCGACTTTTACGTGCACGAGTCCCGCCAGCGCGGCGGTCTTGGCCGCGAGCTGTTCGAGCATATGCTGCGGGAGGAAAACATACAGCCGGACGAGCTGGCGATCGATCGGCCGTCCGAGAAGTTGCTCGGTTTCCTGCAGAAGCATTACGGACTGTCCAAGAAGATTCCACAGATGAACAACTTTGTCGTGTACGAAGGCTTCTTTGCCAGCAAGGCCCAAAACTCGACCGACATCGATGGTCGTCGCATGCACATCACTGCTAGATAATTCACAACAGCCCCACAACAGTTTCAACGGAACCGAACAGCAATTTTACCT AAAAAAACTCTCACCCAAAGGCCGGAGGTCACACTGATTGGCTTTGTAATG                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX622644             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTGTGCTCGACTTTTACGTGCACGAGTCCCGCCAGCGCGGCGGTCTTGGCCGCGAGCTGTTCGAGCATATGCTGCGGGAGGAAAACATACAGCCGGACGAGCTGGCGATCGATCGGCCGTCCGAGAAGTTGCTCGGTTTCCTGCAGAAGCATTACGGACTGTCCAAGAAGATTCCACAGATGAACAACTTTGTCGTGTACGAAGGCTTCTTTGCCAGCAAGGCCCAAAACTCGACCGACATCGATGGTCGTCGCATGCACATCACTGCTAGATAATTCACAACAGCCCCACAACAGTTTCAACGGAACCGAACAGCAATTTTACCT AAAAAAACTCTCACCCAAAGGCCGGAGGTCACACTGATTGGCTTTGTAATGTATGTCTTTGGTTTGTCCCTACCCACCCCCGATGATGGTTCGTGTATTTAAAATTCGTCTAGGTCTTTGCGAAATCTAGCCACACTGCGATACCTGCGTACTCTAATATCGTGTTAAGCACCAGTAGCAATTAATGTACCGTGTCTAAATTAAATCTTCCCCGGTCGAAGCAGGTTTTACTATAAGTTTGTACGGCCCTTTGCCCCTAATATTAAGCTCACTGTATTCGTTCGTCGTCTTCGGATCTTCTTTCAAGAAAGTTTATAAAATTGTTGAAAGTAATTTATTAAACTCCCAAGT]


>consensus_8367#0 CCGGCGGAAAGTTTCAATTTGTCGTCGTTAAGTGAGGAAAGAATTCATTCTCCTCCCAGC ACGAAGTATTAGGACGGTTCGCCCGGGAAGCTACAGGCGCTAGACATCGCAAACGAACGG AGCGCAATCATTTGTGATATTAATATTTACCTATTTATTACTACTGCAAAGCTCTACTGG TCTAACTGGCCTTTAGTGAGACGCGACGGTGTTTGATTATTGGCAGTGTGTTGTGAAGTT AGCGTGAAGTGATATTGAACGCAATCGGTGACTAATTGTGTGACTAATAAACAAACAAAA AACCATTCCAAAATCATGGAGTTCCGCTTCAACATGCATCCCCTGTTCCGGGCACGGATT GTACGGATAAATAACTCGCTGCTCCCGACCGGCTTCGTTGCACAGTCCCGCCGTGTTGCA CTCGATGCCACGGCACAGATTTCGGAGATCATTAACACGATCGGCTCGATGTCGGCACAG GCACAGGGCCTTTCCGTTCCGGTAACGACCGCCCAAAAGCTGCGCAACTCGGACCATCAC ATCTATCTGATGTTTGAATCGAACGACAGAAATGGTCTCGTCGTCGGCATACTGAAGGTG GGCCGCAAATCGCTGTACGTGTTTGATCCGTCCGGCGAAACGGTCAACGTGACGGCACCG TGTGTGCTCGACTTTTACGTGCACGAGTCCCGCCAGCGCGGCGGTCTTGGCCGCGAGCTG TTCGAGCATATGCTGCGGGAGGAAAACATACAGCCGGACGAGCTGGCGATCGATCGGCCG TCCGAGAAGTTGCTCGGTTTCCTGCAGAAGCATTACGGACTGTCCAAGAAGATTCCACAG ATGAACAACTTTGTCGTGTACGAAGGCTTCTTTGCCAGCAAGGCCCAAAACTCGACCGAC ATCGATGGTCGTCGCATGCACATCACTGCTAGATAATTCACAACAGCCCCACAACAGTTT CAACGGAACCGAACAGCAATTTTACCTAAAAAAACTCTCACCCAAAGGCCGGAGGTCACA CTGATTGGCTTTGTAATGNATGTCTTTGGGTTGTCCCTACCCNCCCCGATGATGGTTCGT GTATTTAAAATTCGTCTAGGTCTTTGCGAAATCTAGCCACACTGCGATACCTGCGTACTC TAATATCGTGTTAAGCACCAGTAGCAATTAATGTACCGTGTCTAAATTAAATCTTCCCCG GTCGAAGCAGGTTTTACTATAAGTTTGTACGGCCCTTTGCCCCTAATATTAAGCTCACTG TATTCGTTCGTCGTCTTCGGATCTTCTTTCAAGAAAGTTTATAAAATTGTTGAAAGTAAT TTATTAAACTCCCAAGT



consensusID : consensus_8367#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 688
fasta sequence
                              [CCGCGTGAACCGTGCGGACGCAAAGCTAATTCGCTCCCCGAAGAAAACCGCTCAAACATTTCTTGGGAAAATTGTAACTGGTGACTTCCCTTTTCTCTTCTCGTGTGTGTGTGTGTGTTTGTGCTCTGCTAGCCAACACAGTGTGTGGTACTAAGGAAAATTCGTTCAGTGCGTAAGGCGTGAAAAATCATTCCATTGCCGTTGGGCTTACTCGCTCCCAGCGCTTTGTGGTGCGTTCACGCTCTCGTGTGTCTGTGCTTCGTGACATCATCATCATCGTCATCGCCATCATCACCAGCAGCAACAGCAGCATCATCTGGGCGCGTTTGCATACATCGGTGGTGGTGTAAAAGAGTAGTAGGCCGTGCCGAAGTGACCGGGTTGATCAAATCGTGCAAAAGCGTTACTGTGAAGAATTTTGTGAAAAGTTTGTATTTTAGAAAAACTGTTTTCAACCACCAATAAACTACTCACGGGTGAACAAGTGAAGAAGCTGCCGCAGACAAGCGAATCATCTGTTTCAATTTGTCGTCGTTAAGTGAGGAAAGAATTCATTCTCCTCCCAGCACGAAGTATTAGGACGGTTCGCCCGGGAAGCTACAGGCGCTAGACATCGCAAACGAACGGAGCGCA-ATCATTTGTGATATTAATATTTACCTATTTATTACTACTGCAAAGCTCTACTGGT]

[+] EMBL BM650493             [CCGCGTGAACCGTGCGGACGCAAAGCTAATTCGCTCCCCGAAGAAAACCGCTCAAACATTTCTTGGGAAAATTGTAACTGGTGACTTCCCTTTTCTCTTCTCGTGTGTGTGTGTGTGTTTGTGCTCTGCTAGCCAACACAGTGTGTGGTACTAAGGAAAATTCGTTCAGTGCGTAAGGCGTGAAAAATCATTCCATTGCCGTTGGGCTTACTCGCTCCCAGCGCTTTGTGGTGCGTTCACGCTCTCGTGTGTCTGTGCTTCGTGACATCATCATCATCGTCATCGCCATCATCACCAGCAGCAACAGCAGCATCATCTGGGCGCGTTTGCATACATCGGTGGTGGTGTAAAAGAGTAGTAGGCCGTGCCGAAGTGACCGGGTTGATCAAATCGTGCAAAAGCGTTACTGTGAAGAATTTTGTGAAAAGTTTGTATTTTAGAAAAACTGTTTTCAACCACCAATAAACTACTCACGGGTGAACAAGTGAAGAAGCTGCCGCAGACAAGCGAATCATCTGTTTCAATTTGTCGTCGTTAAGTGAGGAAAGAATTCATTCTCCTCCCAGCACGAAGTATTAGGACGGTTCGCCCGGGAAGCTACAGGCGCTAGACATCGCAAACGAACGGAGCGCA ATCATTTGTGATATTAATATTTACCTATTTATTACTACTGCAAAGCTCTACTGGT]
[+] EMBL BX622357             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCTAGACATCGCAAACNAACGGANCGCAGATCATTTGTGATATTAATATTTACCTATTTA                        ]


>consensus_8367#1 CCGCGTGAACCGTGCGGACGCAAAGCTAATTCGCTCCCCGAAGAAAACCGCTCAAACATT TCTTGGGAAAATTGTAACTGGTGACTTCCCTTTTCTCTTCTCGTGTGTGTGTGTGTGTTT GTGCTCTGCTAGCCAACACAGTGTGTGGTACTAAGGAAAATTCGTTCAGTGCGTAAGGCG TGAAAAATCATTCCATTGCCGTTGGGCTTACTCGCTCCCAGCGCTTTGTGGTGCGTTCAC GCTCTCGTGTGTCTGTGCTTCGTGACATCATCATCATCGTCATCGCCATCATCACCAGCA GCAACAGCAGCATCATCTGGGCGCGTTTGCATACATCGGTGGTGGTGTAAAAGAGTAGTA GGCCGTGCCGAAGTGACCGGGTTGATCAAATCGTGCAAAAGCGTTACTGTGAAGAATTTT GTGAAAAGTTTGTATTTTAGAAAAACTGTTTTCAACCACCAATAAACTACTCACGGGTGA ACAAGTGAAGAAGCTGCCGCAGACAAGCGAATCATCTGTTTCAATTTGTCGTCGTTAAGT GAGGAAAGAATTCATTCTCCTCCCAGCACGAAGTATTAGGACGGTTCGCCCGGGAAGCTA CAGGCGCTAGACATCGCAAACGAACGGAGCGCAATCATTTGTGATATTAATATTTACCTA TTTATTACTACTGCAAAGCTCTACTGGT



consensusID : consensus_8367#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 600
fasta sequence
                              [CAGATCGCCACGAGGTGACATGCCTGTTTTTTTTTTTGACTTATTGGCAGTGTGTTGTGAAGTTAGCGTGAAGTGATATTGAACGCAATCGGTGACTAATTGTGTGACTAATAAACAAACAATCAAAACCATTCCAAAATCATGGAGTTCCGCTTCAACATGGCATCCCCTGTTCCGGGCACGGATTGTACGGATAAATAACTCGCTGCTCCCGACCGGCTTCGTTGCACAGTCCCGCCGTGTTGCACTCGATGCCACGGCACAGATTTCGGAGATCATTTAACACGATCGGCTCGATGTCGGCACAGGCACAGGGCCTTTCCGTTCCGGTAACGACNCGCCCAAAAGCTGCGCAACTCGGACCATCGACATCTAGTCTGATGTTGAAATCGGAACGAGCAGAAATGGTTCTCGCTCGTCNGGCATACTTGAAAGTTGGGNCCGGTCAAAATCGCTCNGTACGGTGTCTGGCATCCGGTCCGGGGAAAACGGGTCCAAACGGTTNNACAGGGNCACCCGGGTTGTTGGCTCCGAACTTTTGTACGGTNGCAACGANAAGTTACCCNGNCAAGAACAGGAGGGTGCTTGGGACCGANGAAG]

[+] EMBL BX469304             [CAGATCGCCACGAGGTGACATGCCTGTTTTTTTTTTTGACTTATTGGCAGTGTGTTGTGAAGTTAGCGTGAAGTGATATTGAACGCAATCGGTGACTAATTGTGTGACTAATAAACAAACAATCAAAACCATTCCAAAATCATGGAGTTCCGCTTCAACATGGCATCCCCTGTTCCGGGCACGGATTGTACGGATAAATAACTCGCTGCTCCCGACCGGCTTCGTTGCACAGTCCCGCCGTGTTGCACTCGATGCCACGGCACAGATTTCGGAGATCATTTAACACGATCGGCTCGATGTCGGCACAGGCACAGGGCCTTTCCGTTCCGGTAACGACNCGCCCAAAAGCTGCGCAACTCGGACCATCGACATCTAGTCTGATGTTGAAATCGGAACGAGCAGAAATGGTTCTCGCTCGTCNGGCATACTTGAAAGTTGGGNCCGGTCAAAATCGCTCNGTACGGTGTCTGGCATCCGGTCCGGGGAAAACGGGTCCAAACGGTTNNACAGGGNCACCCGGGTTGTTGGCTCCGAACTTTTGTACGGTNGCAACGANAAGTTACCCNGNCAAGAACAGGAGGGTGCTTGGGACCGANGAAG]


>consensus_8367#2 CAGATCGCCACGAGGTGACATGCCTGTTTTTTTTTTTGACTTATTGGCAGTGTGTTGTGA AGTTAGCGTGAAGTGATATTGAACGCAATCGGTGACTAATTGTGTGACTAATAAACAAAC AATCAAAACCATTCCAAAATCATGGAGTTCCGCTTCAACATGGCATCCCCTGTTCCGGGC ACGGATTGTACGGATAAATAACTCGCTGCTCCCGACCGGCTTCGTTGCACAGTCCCGCCG TGTTGCACTCGATGCCACGGCACAGATTTCGGAGATCATTTAACACGATCGGCTCGATGT CGGCACAGGCACAGGGCCTTTCCGTTCCGGTAACGACNCGCCCAAAAGCTGCGCAACTCG GACCATCGACATCTAGTCTGATGTTGAAATCGGAACGAGCAGAAATGGTTCTCGCTCGTC NGGCATACTTGAAAGTTGGGNCCGGTCAAAATCGCTCNGTACGGTGTCTGGCATCCGGTC CGGGGAAAACGGGTCCAAACGGTTNNACAGGGNCACCCGGGTTGTTGGCTCCGAACTTTT GTACGGTNGCAACGANAAGTTACCCNGNCAAGAACAGGAGGGTGCTTGGGACCGANGAAG



consensusID : consensus_8367#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 511
fasta sequence
                              [AATCCCCGAGGTTATCGCCATCATCACCAGCAGCAACAGCAGCATCATCTGGGCGCGTTTGCATACATCGGTGGTGGTGTAAAAGAGTAGTAGGCCGTGCCGAAGTGACCGGGTTGATCAAATCGTGCAAAAGCGTTACTGTGAAGAATTTTGTGAAAAGTTTGTATTTTAGACAAAACTGTTTTCAACCACCCAATAAACTACTCACGGGTGAACAAGTGAAGAAGCTGCCGCAGACAAGCGAATCCATCTGTTTCAATATTGTCGTCGTTAAGTGAGGAACAGAATTCATTCTCCTCCCAGCACGAAGTATTAGGACGGTTCGCCCGGGAAGCTACAGGCGCTAGACATCGCTAAACGAACGGAGCGCAATCATTTGTGATATTAATATTTACCTATTTATTACTACTGGCAAAGCTCTACTGGCTCTAACTGGGCCTTTAGTGAGACGCGACGGTGTTTGATTATTGGCAGTGTGTAGTGAAGTTAGCGTGAAGTGATATTGAACGCA]

[+] EMBL AL697373             [AATCCCCGAGGTTATCGCCATCATCACCAGCAGCAACAGCAGCATCATCTGGGCGCGTTTGCATACATCGGTGGTGGTGTAAAAGAGTAGTAGGCCGTGCCGAAGTGACCGGGTTGATCAAATCGTGCAAAAGCGTTACTGTGAAGAATTTTGTGAAAAGTTTGTATTTTAGACAAAACTGTTTTCAACCACCCAATAAACTACTCACGGGTGAACAAGTGAAGAAGCTGCCGCAGACAAGCGAATCCATCTGTTTCAATATTGTCGTCGTTAAGTGAGGAACAGAATTCATTCTCCTCCCAGCACGAAGTATTAGGACGGTTCGCCCGGGAAGCTACAGGCGCTAGACATCGCTAAACGAACGGAGCGCAATCATTTGTGATATTAATATTTACCTATTTATTACTACTGGCAAAGCTCTACTGGCTCTAACTGGGCCTTTAGTGAGACGCGACGGTGTTTGATTATTGGCAGTGTGTAGTGAAGTTAGCGTGAAGTGATATTGAACGCA]


>consensus_8367#3 AATCCCCGAGGTTATCGCCATCATCACCAGCAGCAACAGCAGCATCATCTGGGCGCGTTT GCATACATCGGTGGTGGTGTAAAAGAGTAGTAGGCCGTGCCGAAGTGACCGGGTTGATCA AATCGTGCAAAAGCGTTACTGTGAAGAATTTTGTGAAAAGTTTGTATTTTAGACAAAACT GTTTTCAACCACCCAATAAACTACTCACGGGTGAACAAGTGAAGAAGCTGCCGCAGACAA GCGAATCCATCTGTTTCAATATTGTCGTCGTTAAGTGAGGAACAGAATTCATTCTCCTCC CAGCACGAAGTATTAGGACGGTTCGCCCGGGAAGCTACAGGCGCTAGACATCGCTAAACG AACGGAGCGCAATCATTTGTGATATTAATATTTACCTATTTATTACTACTGGCAAAGCTC TACTGGCTCTAACTGGGCCTTTAGTGAGACGCGACGGTGTTTGATTATTGGCAGTGTGTA GTGAAGTTAGCGTGAAGTGATATTGAACGCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8367#1      ------------------------------------------------------------
consensus_8367#3      ------------------------------------------------------------
consensus_8367#0      CCGGCGGAAAGTTTCAATTTGTCGTCGTTAAGTGAGGAAAGAATTCATTCTCCTCCCAGC 60
consensus_8367#2      ------------------------------------------------------------
                                                                                  

consensus_8367#1      ---------------------------------------CCGCGTGAACCGTGCGGACGC 21
consensus_8367#3      ------------------------------------------------------------
consensus_8367#0      ACGAAGTATTAGGACGGTTCGCCCGGGAAGCTACAGGCGCTAGACATCGCAAACGAACGG 120
consensus_8367#2      ------------------------------------------------------------
                                                                                  

consensus_8367#1      AAAGCTAATTCGCTCCCCGAAGAAAACCGCTCAAACATTTCTTGGGAAAATTGTAAC--T 79
consensus_8367#3      ------------------------------------------------------------
consensus_8367#0      AGCGCAATCATTTGTGATATTAATATTTACCTATTTATTACTACTGCAAAGCTCTACTGG 180
consensus_8367#2      ----------------------------------------------CAGATCGCCAC-GA 13
                                                                                  

consensus_8367#1      GGTGACTTCCCTTTTCTCTTCTCGTGTGTGTGTGTGTGTTTGTGCTCTGCTAGCCAACAC 139
consensus_8367#3      ------------------------------------------------------------
consensus_8367#0      TCTAACTGGCCTTTAGTGAGACGCGACGGTGTTTGATTATTGGCAGTGTGTTGTGAAGTT 240
consensus_8367#2      GGTGACATGCCTGTTTT---------TTTTTTTGACTTATTGGCAGTGTGTTGTGAAGTT 64
                                                                                  

consensus_8367#1      AGTGTGTGGTACTAAGGAAAATTCGTTCAGTGCGTAAG-GCGTGAAAAATCATTCCATTG 198
consensus_8367#3      ------------------------------------------------------------
consensus_8367#0      AGCGTGAAGTGATATTGAACG--CAATCGGTGACTAATTGTGTGACTAATAAACAAACAA 298
consensus_8367#2      AGCGTGAAGTGATATTGAACG--CAATCGGTGACTAATTGTGTGACTAATAAACAAACAA 122
                                                                                  

consensus_8367#1      CCGTTGGGCTTACTCGCTCCCAGCGCTTTGTGGTGCGTTCACGCTCTCGTGTGTCTGTGC 258
consensus_8367#3      ------------------------------------------------------------
consensus_8367#0      --AAAACCATTCCAAAATCATGGAGTTCCGCTTCAACATG-CATCCCCTGTTCCGGGCAC 355
consensus_8367#2      TCAAAACCATTCCAAAATCATGGAGTTCCGCTTCAACATGGCATCCCCTGTTCCGGGCAC 182
                                                                                  

consensus_8367#1      TTCGTGACATCATCATCATCGTCATCGCCATCATCACCAGCAGCAACA-GCAGCATCATC 317
consensus_8367#3      ----------AATCCCCGAGGTTATCGCCATCATCACCAGCAGCAACA-GCAGCATCATC 49
consensus_8367#0      GGATTGTACGGATAAATAAC-TCGCTGCTCCCG--ACCGGCTTCGTTGCACAGTCCCGCC 412
consensus_8367#2      GGATTGTACGGATAAATAAC-TCGCTGCTCCCG--ACCGGCTTCGTTGCACAGTCCCGCC 239
                                 **        *    **   *   *** **  *      ***   *  *

consensus_8367#1      TGGGCGCGTTTGCATACATCGGTGGTGGTGTAAAAGAGTAGTAGGCCGTGCCGAAGTGAC 377
consensus_8367#3      TGGGCGCGTTTGCATACATCGGTGGTGGTGTAAAAGAGTAGTAGGCCGTGCCGAAGTGAC 109
consensus_8367#0      GTGTTGCACTCG-ATGCCACGGCACAGATTTCGGAGATCATT-AACACGATCGGCTCGAT 470
consensus_8367#2      GTGTTGCACTCG-ATGCCACGGCACAGATTTCGGAGATCATTTAACACGATCGGCTCGAT 298
                        *  **  * * ** *  ***    * * *   ***  * *   *     **    ** 

consensus_8367#1      CGGGTTGATCAAATCGTGCAAAAGCGTTACTGTGAAGAATTTTGTGAAAAGTTTGTATTT 437
consensus_8367#3      CGGGTTGATCAAATCGTGCAAAAGCGTTACTGTGAAGAATTTTGTGAAAAGTTTGTATTT 169
consensus_8367#0      GTCGGCACAGGCACAGGGCCTTTCCGTTCCGGTAACGACC-GCCCAAAAGCTGCGCAACT 529
consensus_8367#2      GTCGGCACAGGCACAGGGCCTTTCCGTTCCGGTAACGACNCGCCCAAAAGCTGCGCAACT 358
                         *        *  * **     **** * ** * **        ***  *  * *  *

consensus_8367#1      TAGA-AAAACTGTTTTCAACCACC-AATAAACTACTCACGGGTGAACAAGTGAAGAAGCT 495
consensus_8367#3      TAGACAAAACTGTTTTCAACCACCCAATAAACTACTCACGGGTGAACAAGTGAAGAAGCT 229
consensus_8367#0      CGGA-CCATC-ACATCTA-TCTGATGTTTGAATCG-AACGA-CAGAAATGGT-CTCG-TC 582
consensus_8367#2      CGGA-CCATCGACATCTAGTCTGATGTTGAAATCGGAACGAGCAGAAATGGTTCTCGCTC 417
                        **   * *    *  *  *      *  * *    ***     * * *          

consensus_8367#1      GCCG--CAGACAAGCGAATC-ATCT---GTTTCAAT-TTGTCGTCGTTAAGTGAGGAA-A 547
consensus_8367#3      GCCG--CAGACAAGCGAATCCATCT---GTTTCAATATTGTCGTCGTTAAGTGAGGAACA 284
consensus_8367#0      GTCGG-CATACT-GAAGGTGGGCCGCAAATCGCTGT-ACGTGTTTGATCCGTCCGGCGAA 639
consensus_8367#2      GTCNGGCATACTTGAAAGTTGGGN--------CCGG-TCAAAATCGCTCNGTACGGTGT- 467
                      * *   ** **  *    *             *          * * *  **  **    

consensus_8367#1      GAATTCATTCTCCTCCCAGCACGAAGTATTAGGACGGTTCGCCCGGGAAGCTACAGGCGC 607
consensus_8367#3      GAATTCATTCTCCTCCCAGCACGAAGTATTAGGACGGTTCGCCCGGGAAGCTACAGGCGC 344
consensus_8367#0      ACGGTCAA-CGTGACGGCACCGTGTGTGCTCGACTTTTACGTGCACGAGTCCCGCCA-GC 697
consensus_8367#2      -CTGGCAT-CCGGTCCGGGGAAAACGGGTCCAAACGGT---TNNACAGGGNCACCCG-G- 520
                           **  *    *          *           *                    * 

consensus_8367#1      TAGACATCGC-AAACGAACGGAGCGCAATCATTTGTGATATTAATAT-TTACCTATTTAT 665
consensus_8367#3      TAGACATCGCTAAACGAACGGAGCGCAATCATTTGTGATATTAATAT-TTACCTATTTAT 403
consensus_8367#0      GCGGCGGTCTTGGCCGCGAGCTGTTCGAGCATATGCTGCGGGAGGAAAACATACAGCCGG 757
consensus_8367#2      -----GTTGTTGGCTCCGAACTTTT---GTACG-GTNGCAACGANAAGTTACCCNGNCAA 571
                                                    *   *          *    *         

consensus_8367#1      TACTACTG-CAAA-GCTCTACTGGT----------------------------------- 688
consensus_8367#3      TACTACTGGCAAA-GCTCTACTGGCTCTAACTGGGCCTTTAGTGAGACGCGACGGTGTTT 462
consensus_8367#0      ACGAGCTGGCGATCGATCGGCCGTCCGAGAAGTTGCTCGGTTTCCTGCAGAAGCATTACG 817
consensus_8367#2      --GAACAGGAGGGTGCTTGG--GACCGANGAAG--------------------------- 600
                           * *      * *     *                                     

consensus_8367#1      ------------------------------------------------------------
consensus_8367#3      GATTATTGGCAGTGTGTAGTGAAGTTAGCGTGAAGTGATATTGAACGCA----------- 511
consensus_8367#0      GACTGTCCAAGAAGATTCCACAGATGAACAACTTTGTCGTGTACGAAGGCTTCTTTGCCA 877
consensus_8367#2      ------------------------------------------------------------
                                                                                  

consensus_8367#1      ------------------------------------------------------------
consensus_8367#3      ------------------------------------------------------------
consensus_8367#0      GCAAGGCCCAAAACTCGACCGACATCGATGGTCGTCGCATGCACATCACTGCTAGATAAT 937
consensus_8367#2      ------------------------------------------------------------
                                                                                  

consensus_8367#1      ------------------------------------------------------------
consensus_8367#3      ------------------------------------------------------------
consensus_8367#0      TCACAACAGCCCCACAACAGTTTCAACGGAACCGAACAGCAATTTTACCTAAAAAAACTC 997
consensus_8367#2      ------------------------------------------------------------
                                                                                  

consensus_8367#1      ------------------------------------------------------------
consensus_8367#3      ------------------------------------------------------------
consensus_8367#0      TCACCCAAAGGCCGGAGGTCACACTGATTGGCTTTGTAATGNATGTCTTTGGGTTGTCCC 1057
consensus_8367#2      ------------------------------------------------------------
                                                                                  

consensus_8367#1      ------------------------------------------------------------
consensus_8367#3      ------------------------------------------------------------
consensus_8367#0      TACCCNCCCCGATGATGGTTCGTGTATTTAAAATTCGTCTAGGTCTTTGCGAAATCTAGC 1117
consensus_8367#2      ------------------------------------------------------------
                                                                                  

consensus_8367#1      ------------------------------------------------------------
consensus_8367#3      ------------------------------------------------------------
consensus_8367#0      CACACTGCGATACCTGCGTACTCTAATATCGTGTTAAGCACCAGTAGCAATTAATGTACC 1177
consensus_8367#2      ------------------------------------------------------------
                                                                                  

consensus_8367#1      ------------------------------------------------------------
consensus_8367#3      ------------------------------------------------------------
consensus_8367#0      GTGTCTAAATTAAATCTTCCCCGGTCGAAGCAGGTTTTACTATAAGTTTGTACGGCCCTT 1237
consensus_8367#2      ------------------------------------------------------------
                                                                                  

consensus_8367#1      ------------------------------------------------------------
consensus_8367#3      ------------------------------------------------------------
consensus_8367#0      TGCCCCTAATATTAAGCTCACTGTATTCGTTCGTCGTCTTCGGATCTTCTTTCAAGAAAG 1297
consensus_8367#2      ------------------------------------------------------------
                                                                                  

consensus_8367#1      ----------------------------------------
consensus_8367#3      ----------------------------------------
consensus_8367#0      TTTATAAAATTGTTGAAAGTAATTTATTAAACTCCCAAGT 1337
consensus_8367#2      ----------------------------------------
                                                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)