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Anopheles gambiae
cluster # 8383 cluster # 8383       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8383#0 length = 1777 sequences # 8  
consensus_8383#1 length = 699 sequences # 1  
consensus_8383#2 length = 663 sequences # 1  

consensusID : consensus_8383#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1777
fasta sequence
                              [CAGATCGCCCGAGTGNACGAGGGACATACTGTGTCGTCGTTATTGACAGTAAGAAAGATCCTGTGATTTCTTGTACAGCATCCCATCGGATCAGGACACGGCGGCAGATAAAGCCAGCTTGGGTAGCGGACGATCATTCCGCAGCTCTGAGCGTTCGTTCCGTGATGACTTCGATTCTACCAGTGTGTCTTCAGCGCACAAGCGCATCAATTTCGG-AAACTGATTCCGAAGCTCAACTCCAGCCAGCATCGTAATCTGTCGG-GGATAGTGCAACCGGATCGTACAACATCCCAGAGAACGTCAGTCTGGAGCAGGAGCTAGAGCAAGAGGAGACGACGGCGGCTCAGCAGCATACCGCTTCATCGAACTCTTCCGCAGCCACTGTAGCGCTTTCGCGCAACGCAACACAAACGCAGATGTCGCACTCTTCC-GGACTGTCCGCACA--TCAACAGCAGAACACACAGTCCGGTTCGCTGAATCCATCGCCCGAGTTTACGGTGCGACATACCAGCTTCGTTGCAAACCCATCTTCAAAGCTAGCGATCGCTTCCAGCAGCAAT------AGCAGCAGCAGCAGCAGCAGCAGTTGTTCGTCTAATGAGGCAATCAACAGAGCTATGCTGATCGAAAAGCCCGCCCTATCAACTTACAGTGATAGTGTCTGTTCCTCCGGTCGAGATGCCGAGACAGCCCAGAATCAAAGGAACGAATCGAAACCACTGGATTCGCCCCCCTTGTCTGCAAGCTCCTTGAGTGATAGTTCTAGCCACGAGCAGCCAGCAGTAGCAGCAGCATCAGCGCCTCCGAAATCGCGCACTCACATTTTGCGCAATTTGTTCTTCTCGCTTCCCAACAGCACGGAATCGAACGCGCCGACGGAGGCTACGGTAGAATGCGGACAAGTGACTGTCCCGGGTACACGTGCGAAGACCGCTTCCGCCCCATTAACTACTCCCCTATCTCCATCGTCCCCTTCCACATCTTCCGCTCCGTCGACGACGCTCACAGGGCCTTCCGCGAGCACGCAATCATGAACCGG-CCTCCAT-GCGTTTGCGATGGCCAATTGTTGATTGTTCCACGGACGGACAATCAGATTGCCATATCGCGCAAGCGATAACAAATGTTGTGGAGTTATTATGCATTTTAACTTCCAGGGGCCATTCTTTTCTAATAAGCATTTTTGCTATGAGGTTAGCGTATGGTTAGTTTTCGTTGAATGAGAAAGAGATTCTGTAAGAACCTTTTGTTCCGAGTACTATAACTACTG-CCCCCCTCGAGCGTCCATAAATATATTTAAACAAAAAAAAAAAAACAAGCAAGAAAACGCATAAAAACGATAACACAAGACTGTAATACGCCAGGAGGAAAACGCATGCAAGATTGTTTTACGTGGGCCACACACCTCCTGTGAGTCCACCCCAAAATTGCTCGTAGATCCTTCGACGAGGCTTCATGCGTGAACAAAAAAAAAGTAAACATAATTCATAATATTAATAAGCACTAGACAACGAGAGCGCGGATCTATTATTATGCCAAAATCAGGAGAGCGTGTTAGTTTGTTTGGTTGTTCGTTTATTTTTCTCCACTACTACAACAACCCGAGGAGAGAGAATGAGAGACAATAGAAGCGATGAGTGTTCCGGGAGATAGATTTTTTTGTTAGATAAGACACTATTAGGTAGACAGATATGGTAGCAAGAAATTAGTGTCGTTGGAGAATAGGAAATTAAAGAATTACAACGTTCATGCTATTTAAGATAGAGGGTGAATAGGAGAGAAA]

[+] EMBL AL696925             [CAGATCGCCCGAGTGNACGAGGGACATACTGTGTCGTCGTTATTGACAGTAAGAAAGATCCTGTGATTTCTTGTACAGCATCCCATCGGATCAGGACACGGCGGCAGATAAAGCCAGCTTGGGTAGCGGACGATCATTCCGCAGCTCTGAGCGTTCGTTCCGTGATGACTTCGATTCTACCAGTGTGTCTTCAGCGCACAAGCGCATCAATTTCGG AAACTGATTCCGAAGCTCAACTCCAGCCAGCATCGTAATCTGTCGG GGATAGTGCAACCGGATCGTACAACATCCCAGAGAACGTCAGTCTGGAGCAGGAGCTAGAGCAAGAGGAGACGACGGCGGCTCAGCAGCATACCGCTTCATCGAACTCTTCCGCAGCCACTGTAGCGCTTTCGCGCAACGCAACACAAACGCAGATGTCGCACTCTTCC GGACTGTCCGCACA  TCAACAGCAGAACACACAGTCCGGTTCGCTGAATCCATCGCCCGAGTTTACGGTGCGACATACCAGCTTCGTTGCAAACCCATCTTCAAAGCTAGCGATCGCTTCCAGCAGCAAT      AGCAGCAGCAGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX602850             [                                                                             GCATCCCATCGGATCAGGACACGGCGGCAGATAAAGCCAGCTTGGGTAGCGGACGATCATTCCGCAGCTCTGAGCGTTCGTTCCGTGATGACTTCGATTCTACCAGTGTGTCTTCAGCGCACAAGCGCATCAATTTCGGCAAACTGATTCCGAAGCTCAACTCCAGCCAGCATCGTAATCTGTCGGTGGATAGTGCAACCGGATCGTACAACATCCCAGAGAACGTCAGTCTGGAGCAGGAGCTAGAGCAAGAGGAGACGACGGCGGCTCAGCAGCATACCGCTTCATCGAACTCTTCCGCAGCCACTGTAGCGCTTTCGCGCAACGCAACACAAACGCAGATGTCGCACTCTTCC GGACTGTCCGCACA  TCAACAGCAGAACACACAGTCCGGTTCGCTGAATCCATCGCCCGAGTTTACGGTGCGACATACCAGCTTCGTTGCAAACCCATCTTCAAAGCTAGCGATCGCTTCCAGCAGCAAT      AGCAGCAGCAGCAGCAGCAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AL930213             [                                                                                                                                                                                                                                                                                  ACCGGATCGTACAACATCCCAGAGAACGTCAGCCTGGAGCAGGAGCTAGAGC AGAGGAGACGACGGCGGCTCAGCAGCATACCGCTTCATCGAACTCTTCCGCCGCCACTGTAGCGCTTTCGCGCAACGCAACACAAACGCAGATGTCGCACTCTTCCGGGACTGTCCGCACAGTTCAACAGCAGAACACACAGTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX618238             [                                                                                                                                                                                                                                                                                                                 GTCTGGAGCAGGAGCTAGAGCAAGAGGAGACGACGGCGGCTCAGCAGCATACCGCTTCATCGAACTCTTCCGCAGCCACTGTAGCGCTTTCGCGCAACGCAACACAAACGCAGATGTCGCACTCTTCC GGACTGTCCGCACA  TCAACAGCAGTACACACAGTCCGGTTCGCTGAATCCATCGCCCGAGTTTACGGTGCGACATACCAGCTTCGTTGCAAACCCATCTTCAAAGCTAGCGATCGCTTCCAGCAGCAAT      AGCAGCAGCAGCAGCAGCAGCAGTTGTTCGTCTAATGAGGCAATCAACAGAGCTATGCTGATCGAAAAGCCCGCCCTATCAACTTACAGTGATAGTGTCTGTTCCTCCGGTCGAGATGCCGAGTCAGCCCAGAATCAAAGGAACGAATCGAAACCACTGGATTCGCCCCCCTTGTCTGCAAGCTCCTTGAGTGATAGTTCTAGCCACGAGCAGCCAGCAGTAGCAGCAGCATCAGCGCCTCCGAAATCGCGCACTCACATTTTGCGCAATTTGTTCTTCTCGCTTCCCAACAGCACGGAATCGAACGCGCCGACGGAGGCTACGGTAGAATGCGGACAAGTGACTGTCCTCGGTACACGTGCGAAGACCGCTTCCGCCCCATTAACTACTCCCCTATCTCCATCGTCCCCTTCCACATCTTCCGCTCCGTCGACGACGCTCACAGGGCCTTCCGCGAGCACGCAATCATGAACCGG CCTCCAT GCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM590906             [                                                                                                                                                                                                                                                                                                                                                                                    ccgCGCCGCCACTGTAGCGCTTTCGCGCAACGCAACACAAACGCAGATGTCGCACTCTTCC GGACTGTCCGCACA  TCAACAGCAGAACACACAGTCCGGTTCGCTGAATCCGTCGCCCGAGTTTACGGTGCGACATACAAGCTTCGTTGCAAACCCGTCTTCAAAGCTAGCGATCGCTTCCAGCAGCAATAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTGTTCGTCTAATGAGGCAATCAACAGAGCTATGCTGATCGAAAAGCCCGCCCTATCAACTTACAGTGATAGTGTCTGTTCCTCCGGTCGAGATGCCGAGACAGCCCAGAATCAAAGGAACGAATCGAAACCACTGGATTCACCCCCCTTGTCTGCAAGCTCCTTGAGTGATAGTTCTAGCCACGAGCAGCCAGCAGTAGCAGCAGCATCAGCGCCTCCTAAATCGCGCACTCACATTTTGCGCAATTTGTTCTTCTCGCTTCCCAACAGCACGGAATCGAACGCGCCGACGGAGGCTACGGTAGAATGCGGACAAGTGACTGTCCCGGGTACACGTGCGAAGACCGCTTCCGCCCCATTAACTACTCCCCTATCTCCATCGTCCCCTTCCACATCTTCCGCTCCGTCGACGACGCTCACAGGGCCTTCTGCGAGCACGCAATCATGAACCGGCCCTCCATGGCGTTTGCGATGGCCAATTGGTGATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM653164             [                                                                                                                                                                                                                                                                                                                                                                                                                                   ccgCGCACTCTTCC GGACTGTCCGCACA  TCAACAGCAGAACACACAGTCCGGTTCGCTGAATCCGTCGCCCGAGTTTACGGTGCGACATACAAGCTTCGTTGCAAACCCATCTTCAAAGCTAGCGATCGCTTCCAGCAGCAATAGC   AGCAGCAGCAGCAGCAGCAGCAGTTGTTCGTCTAATGAGGCAATCAACAGAGCTATGCTGATCGAAAAGCCCGCCCTATCAACTTACAGTGATAGTGTCTGTTCCTCCGGTCGAGATGCCGAGGCAGCTCAGAATCAAAGGAACGAATCGAAACCACTGGATTCGCCCCCCTTGTCTGCAAGCTCTTTGAGTGATAGTTCTAGCCACGAGCAGCCAGCAGCAGCAGCGGCATCAGCGCCTCCGAAATCGCGCACTCACATTTTGCGCAATTTGTTCTTCTCGCTTCCCAACAGCACGGAATCGAACGCGCCGACGGAGGCTACGGTAGAATGCGGACAAGTGACTGTCCCGGGTACACGTGCGAAGACCGCTTCCGCCCCATTAACTACTCCCCTATCTCCATCGTCCCCTTCCACATCTTCCGCTCCGTCGACGACGCTCACAGGGCCTTCCGCGAGCACGCAATCATGAACCGG CCTCCAT GCGTTTGCGATGGCCAATTGTTGATTGTTCCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM575281             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCG CGACGACGCTCACAGGGCCTTCCGCGAGCACGCAATCATGAACCGG CCTCCAT GCGTTTGCGATGGCCAATTGTTGATTGTTCCACGGACGGACAATCAGATTGCCATATCGCGCAAGCGATAACAAATGTTGTGGAGTTATTATGCATTTTAACTTCCAGGGGCCATTCTTTTCTAATAAGCATTTTTGCTATGAGGTTAGCGTATGGTTAGTTTTCGTTGAATGAGAAAGAGATTCTGTAAGAACCTTTTGTTCCGAGTACTATAACTACTG CCCCCCTCGAGCGTCCATAAATATATTTAAACAAAAAAAAAAAAACAAGCAAGAAAACGCATAAAAACGATAACACAAGACTGTAATACGCCAGGAGGAAAACGCATGCAAGATTGTTTTACGTGGGCCACACACCTCCTGTGAGTCCACCCCAAAATTGCTCGTAGATCCTTCGACGAGGCTTCATGCGTGAACAAAAAAAAAGTAAACATAATTCATAATATTAATAAGCACTAGACAACGAGAGCGCGGATCTATTATTATGCCAAAATCAGGAGAGCGTGTTAGTTTGTTTGGTTGTTCGTTTATTTTTCTCCACTACTACAACAACCCGAGGAGAGAGAATGAGAGACAATAGAAGCGATGAGTGTTCCGGGAGATAGATTTTTTTGTTAGATA                                                                                                                  ]
[+] EMBL BX626477             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTGTGGAGTTATTATGCATTTTAACTTCCATGGGCCATTCTTTTCTAATAAGCATTTTTGCTATGAGGTTAGCGTATGGTTAGTTTTCGTTGAATGAGAAAGAGATTCTGTAAGAACCTTTTGTTCCGAGTACTATAACTACTGCCCCCCCTCGAGCGTCCATAAATATATTTAAAC   AAAAAAAAAACAAGCAAGAAAACGCATAAAAACGATAACACAAGACTGTAATACGCCAGGAGGAAAACGCATGCAAGATTGTTTTACGTGGGCCACACACCTCCTGTGAGTCCACCCCAAAATTGCTCGTAGATCCTTCGACGAGGCTTCATGCGTGAAC AAAAAAAAGTAAACATAATTCATAATATTAATAAGCACTAGACAACGAGAGCGCGGATCTATTATTATGCCAAAATCAGGAGAGCGTGTTAGTTTGTTTGTTTGTTCGTTTATTTTTCTCCACTACTACAACAACCCGAGGAGAGAGAATGAGAGACAATAGAAGCGATGAGTGTTCCGGGAGATAGATTTTTTTGTTAGATAAGACACTATTAGGTAGACAGATATGGTAGCAAGAAATTAGTGTCGTTGGAGAATAGGAAATTAAAGAATTACAACGTTCATGCTATTTAAGATAGAGGGTGAATAGGAGAGAAA]


>consensus_8383#0 CAGATCGCCCGAGTGNACGAGGGACATACTGTGTCGTCGTTATTGACAGTAAGAAAGATC CTGTGATTTCTTGTACAGCATCCCATCGGATCAGGACACGGCGGCAGATAAAGCCAGCTT GGGTAGCGGACGATCATTCCGCAGCTCTGAGCGTTCGTTCCGTGATGACTTCGATTCTAC CAGTGTGTCTTCAGCGCACAAGCGCATCAATTTCGGAAACTGATTCCGAAGCTCAACTCC AGCCAGCATCGTAATCTGTCGGGGATAGTGCAACCGGATCGTACAACATCCCAGAGAACG TCAGTCTGGAGCAGGAGCTAGAGCAAGAGGAGACGACGGCGGCTCAGCAGCATACCGCTT CATCGAACTCTTCCGCAGCCACTGTAGCGCTTTCGCGCAACGCAACACAAACGCAGATGT CGCACTCTTCCGGACTGTCCGCACATCAACAGCAGAACACACAGTCCGGTTCGCTGAATC CATCGCCCGAGTTTACGGTGCGACATACCAGCTTCGTTGCAAACCCATCTTCAAAGCTAG CGATCGCTTCCAGCAGCAATAGCAGCAGCAGCAGCAGCAGCAGTTGTTCGTCTAATGAGG CAATCAACAGAGCTATGCTGATCGAAAAGCCCGCCCTATCAACTTACAGTGATAGTGTCT GTTCCTCCGGTCGAGATGCCGAGACAGCCCAGAATCAAAGGAACGAATCGAAACCACTGG ATTCGCCCCCCTTGTCTGCAAGCTCCTTGAGTGATAGTTCTAGCCACGAGCAGCCAGCAG TAGCAGCAGCATCAGCGCCTCCGAAATCGCGCACTCACATTTTGCGCAATTTGTTCTTCT CGCTTCCCAACAGCACGGAATCGAACGCGCCGACGGAGGCTACGGTAGAATGCGGACAAG TGACTGTCCCGGGTACACGTGCGAAGACCGCTTCCGCCCCATTAACTACTCCCCTATCTC CATCGTCCCCTTCCACATCTTCCGCTCCGTCGACGACGCTCACAGGGCCTTCCGCGAGCA CGCAATCATGAACCGGCCTCCATGCGTTTGCGATGGCCAATTGTTGATTGTTCCACGGAC GGACAATCAGATTGCCATATCGCGCAAGCGATAACAAATGTTGTGGAGTTATTATGCATT TTAACTTCCAGGGGCCATTCTTTTCTAATAAGCATTTTTGCTATGAGGTTAGCGTATGGT TAGTTTTCGTTGAATGAGAAAGAGATTCTGTAAGAACCTTTTGTTCCGAGTACTATAACT ACTGCCCCCCTCGAGCGTCCATAAATATATTTAAACAAAAAAAAAAAAACAAGCAAGAAA ACGCATAAAAACGATAACACAAGACTGTAATACGCCAGGAGGAAAACGCATGCAAGATTG TTTTACGTGGGCCACACACCTCCTGTGAGTCCACCCCAAAATTGCTCGTAGATCCTTCGA CGAGGCTTCATGCGTGAACAAAAAAAAAGTAAACATAATTCATAATATTAATAAGCACTA GACAACGAGAGCGCGGATCTATTATTATGCCAAAATCAGGAGAGCGTGTTAGTTTGTTTG GTTGTTCGTTTATTTTTCTCCACTACTACAACAACCCGAGGAGAGAGAATGAGAGACAAT AGAAGCGATGAGTGTTCCGGGAGATAGATTTTTTTGTTAGATAAGACACTATTAGGTAGA CAGATATGGTAGCAAGAAATTAGTGTCGTTGGAGAATAGGAAATTAAAGAATTACAACGT TCATGCTATTTAAGATAGAGGGTGAATAGGAGAGAAA



consensusID : consensus_8383#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 699
fasta sequence
                              [CCGCGGACGCGTGGGTTTTTGTTTAAATATATTTATGGACGCTCACAGGGCCTTCCGCGAGCACGCAATCATGAACCGGCCTCCATGCGTTTGCGATGGCCAATTGTTGATTGTTCCACGGACGGACAATCAGATTGCCATATCGCGCAAGCGATAACAAATGTTGTGGAGTTATTATGCATTTTAACTTCCAGGGGCCATTCTTTTCTAATAAGCATTTTTGCTATGAGGTTAGCGTATGGTTAGTTTTCGTTGAATGAGAAAGAGATTCTGTAAGAACCTTTTGTTCCGAGTACTATAACTACTGCCCCCCTCGAGCGTCCATAAATATATTTAAACAAAAAAAAAAAAACAAGCAAGAAAACGCATAAAAACGATAACACAAGACTGTAATACGCCAGGAGGAAAACGCATGCAAGATTGTTTTACGTGGGCCACACACCTCCTGTGAGTCCACCCCAAAATTGCTCGTAGATCCTTCGACGAGGCTTCATGCGTGAACAAAAAAAAAGTAAACATAATTCATAATATTAATAAGCACTAGACAACGAGAGCGCGGATCTATTATTATGCCAAAATCAGGAGAGCGTGTTAGTTTGGTTGTTTGGTCGTTTATTTTTCTCCACTACTACAACAACCCGAGGAGAGAGAATGAGAGACCATAGAAGCGATGAGTGTTCCGGGAGATAGATTTTTTTT]

[+] EMBL BM581724             [CCGCGGACGCGTGGGTTTTTGTTTAAATATATTTATGGACGCTCACAGGGCCTTCCGCGAGCACGCAATCATGAACCGGCCTCCATGCGTTTGCGATGGCCAATTGTTGATTGTTCCACGGACGGACAATCAGATTGCCATATCGCGCAAGCGATAACAAATGTTGTGGAGTTATTATGCATTTTAACTTCCAGGGGCCATTCTTTTCTAATAAGCATTTTTGCTATGAGGTTAGCGTATGGTTAGTTTTCGTTGAATGAGAAAGAGATTCTGTAAGAACCTTTTGTTCCGAGTACTATAACTACTGCCCCCCTCGAGCGTCCATAAATATATTTAAACAAAAAAAAAAAAACAAGCAAGAAAACGCATAAAAACGATAACACAAGACTGTAATACGCCAGGAGGAAAACGCATGCAAGATTGTTTTACGTGGGCCACACACCTCCTGTGAGTCCACCCCAAAATTGCTCGTAGATCCTTCGACGAGGCTTCATGCGTGAACAAAAAAAAAGTAAACATAATTCATAATATTAATAAGCACTAGACAACGAGAGCGCGGATCTATTATTATGCCAAAATCAGGAGAGCGTGTTAGTTTGGTTGTTTGGTCGTTTATTTTTCTCCACTACTACAACAACCCGAGGAGAGAGAATGAGAGACCATAGAAGCGATGAGTGTTCCGGGAGATAGATTTTTTTT]


>consensus_8383#1 CCGCGGACGCGTGGGTTTTTGTTTAAATATATTTATGGACGCTCACAGGGCCTTCCGCGA GCACGCAATCATGAACCGGCCTCCATGCGTTTGCGATGGCCAATTGTTGATTGTTCCACG GACGGACAATCAGATTGCCATATCGCGCAAGCGATAACAAATGTTGTGGAGTTATTATGC ATTTTAACTTCCAGGGGCCATTCTTTTCTAATAAGCATTTTTGCTATGAGGTTAGCGTAT GGTTAGTTTTCGTTGAATGAGAAAGAGATTCTGTAAGAACCTTTTGTTCCGAGTACTATA ACTACTGCCCCCCTCGAGCGTCCATAAATATATTTAAACAAAAAAAAAAAAACAAGCAAG AAAACGCATAAAAACGATAACACAAGACTGTAATACGCCAGGAGGAAAACGCATGCAAGA TTGTTTTACGTGGGCCACACACCTCCTGTGAGTCCACCCCAAAATTGCTCGTAGATCCTT CGACGAGGCTTCATGCGTGAACAAAAAAAAAGTAAACATAATTCATAATATTAATAAGCA CTAGACAACGAGAGCGCGGATCTATTATTATGCCAAAATCAGGAGAGCGTGTTAGTTTGG TTGTTTGGTCGTTTATTTTTCTCCACTACTACAACAACCCGAGGAGAGAGAATGAGAGAC CATAGAAGCGATGAGTGTTCCGGGAGATAGATTTTTTTT



consensusID : consensus_8383#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 663
fasta sequence
                              [GACCCACGCGTCCGGTCGCACTCTTCCGGACTGTCCGCACATCAACAGCAGAACACACAGTCCGGTTCGCTGAATCCGTCGCCCGAGTTTACGGTGCGACATACAAGCTTCGTTGCAAACCCGTCTTCAAAGCTAGCGATCGCTTCCAGCAGCAATAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTGTTCGTCTAATGAGGCAATCAACAGAGCTATGCTGATCGAAAAGCCCGCCCTATCAACTTACAGTGATAGTGTCTGTTCCTCCGGTCGAGATGCCGAGACAGCCCAGAATCAAAGGAACGAATCGAAACCACTGGATTCACCCCCCTTGTCTGCAAGCTCCTTGAGTGATAGTTCTAGCCACGAGCAGCCAGCAGTAGCAGCAGCATCAGCGCCTCCTAAATCGCGCACTCACATTTTGCGCAATTTGTTCTTCTCGCTTCCCAACAGCACGGAATCGAACGCGCCGACGGAGGCTACGGTAGAATGCGGACAAGTGACTGTCCCGGGTACACGTGCGAAGACCGCTTCCGCCCCATTAACTACTCCCCTATCTCCATCGTCCCCTTCCACATCTTCCGCTCCGTCGACGACGCTCACAGGGCCTTCTGCGAGCACGCAATCATGAACCGGCCTCCATGCGTTTGCGATGGCCAAT]

[+] EMBL BM622160             [GACCCACGCGTCCGGTCGCACTCTTCCGGACTGTCCGCACATCAACAGCAGAACACACAGTCCGGTTCGCTGAATCCGTCGCCCGAGTTTACGGTGCGACATACAAGCTTCGTTGCAAACCCGTCTTCAAAGCTAGCGATCGCTTCCAGCAGCAATAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTGTTCGTCTAATGAGGCAATCAACAGAGCTATGCTGATCGAAAAGCCCGCCCTATCAACTTACAGTGATAGTGTCTGTTCCTCCGGTCGAGATGCCGAGACAGCCCAGAATCAAAGGAACGAATCGAAACCACTGGATTCACCCCCCTTGTCTGCAAGCTCCTTGAGTGATAGTTCTAGCCACGAGCAGCCAGCAGTAGCAGCAGCATCAGCGCCTCCTAAATCGCGCACTCACATTTTGCGCAATTTGTTCTTCTCGCTTCCCAACAGCACGGAATCGAACGCGCCGACGGAGGCTACGGTAGAATGCGGACAAGTGACTGTCCCGGGTACACGTGCGAAGACCGCTTCCGCCCCATTAACTACTCCCCTATCTCCATCGTCCCCTTCCACATCTTCCGCTCCGTCGACGACGCTCACAGGGCCTTCTGCGAGCACGCAATCATGAACCGGCCTCCATGCGTTTGCGATGGCCAAT]


>consensus_8383#2 GACCCACGCGTCCGGTCGCACTCTTCCGGACTGTCCGCACATCAACAGCAGAACACACAG TCCGGTTCGCTGAATCCGTCGCCCGAGTTTACGGTGCGACATACAAGCTTCGTTGCAAAC CCGTCTTCAAAGCTAGCGATCGCTTCCAGCAGCAATAGCAGCAGCAGCAGCAGCAGCAGC AGCAGTTGTTCGTCTAATGAGGCAATCAACAGAGCTATGCTGATCGAAAAGCCCGCCCTA TCAACTTACAGTGATAGTGTCTGTTCCTCCGGTCGAGATGCCGAGACAGCCCAGAATCAA AGGAACGAATCGAAACCACTGGATTCACCCCCCTTGTCTGCAAGCTCCTTGAGTGATAGT TCTAGCCACGAGCAGCCAGCAGTAGCAGCAGCATCAGCGCCTCCTAAATCGCGCACTCAC ATTTTGCGCAATTTGTTCTTCTCGCTTCCCAACAGCACGGAATCGAACGCGCCGACGGAG GCTACGGTAGAATGCGGACAAGTGACTGTCCCGGGTACACGTGCGAAGACCGCTTCCGCC CCATTAACTACTCCCCTATCTCCATCGTCCCCTTCCACATCTTCCGCTCCGTCGACGACG CTCACAGGGCCTTCTGCGAGCACGCAATCATGAACCGGCCTCCATGCGTTTGCGATGGCC AAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8383#0      CAGATCGCCCGAGTGNACGAGGGACATACTGTGTCGTCGTTATTGACAGTAAGAAAGATC 60
consensus_8383#2      ------------------------------------------------------------
consensus_8383#1      ------------------------------------------------------------
                                                                                  

consensus_8383#0      CTGTGATTTCTTGTACAGCATCCCATCGGATCAGGACACGGCGGCAGATAAAGCCAGCTT 120
consensus_8383#2      ------------------------------------------------------------
consensus_8383#1      ------------------------------------------------------------
                                                                                  

consensus_8383#0      GGGTAGCGGACGATCATTCCGCAGCTCTGAGCGTTCGTTCCGTGATGACTTCGATTCTAC 180
consensus_8383#2      ------------------------------------------------------------
consensus_8383#1      ------------------------------------------------------------
                                                                                  

consensus_8383#0      CAGTGTGTCTTCAGCGCACAAGCGCATCAATTTCGGAAACTGATTCCGAAGCTCAACTCC 240
consensus_8383#2      ------------------------------------------------------------
consensus_8383#1      ------------------------------------------------------------
                                                                                  

consensus_8383#0      AGCCAGCATCGTAATCTGTCGGGGATAGTGCAACCGGATCGTACAACATCCCAGAGAACG 300
consensus_8383#2      ------------------------------------------------------------
consensus_8383#1      ------------------------------------------------------------
                                                                                  

consensus_8383#0      TCAGTCTGGAGCAGGAGCTAGAGCAAGAGGAGACGACGGCGGCTCAGCAGCATACCGCTT 360
consensus_8383#2      ------------------------------------------------------------
consensus_8383#1      ------------------------------------------------------------
                                                                                  

consensus_8383#0      CATCGAACTCTTCCGCAGCCACTGTAGCGCTTTCGCGCAACGCAACACAAACGCAGATGT 420
consensus_8383#2      -------------------------------------------GACCCACGCGTCCG-GT 16
consensus_8383#1      --------------------------------------------CCGCGGACGCGTGGGT 16
                                                                   * *   **     **

consensus_8383#0      CGCACTCTTCCGGACTGTCCGCACATCAACAGCAGAACACAC-AGTCCGGTTCGCTGAAT 479
consensus_8383#2      CGCACTCTTCCGGACTGTCCGCACATCAACAGCAGAACACAC-AGTCCGGTTCGCTGAAT 75
consensus_8383#1      TTTTGTTTAAATATATTTATGGACGCTCACAGGGCCTTCCGCGAGCACGCAATCATGAAC 76
                           * *       * *  * **    ****       * * **  **      **** 

consensus_8383#0      CCATCGCC-CGAGTTTACGGTG-CGACATACCAGCTTCGTTGCAAACCCATCTTCAAAGC 537
consensus_8383#2      CCGTCGCC-CGAGTTTACGGTG-CGACATACAAGCTTCGTTGCAAACCCGTCTTCAAAGC 133
consensus_8383#1      CGGCCTCCATGCGTTTGCGATGGCCAATTGTTGATTGTTCCACGGACGGACAATCAGATT 136
                      *   * **  * **** ** ** * *  *      *      *  **      *** *  

consensus_8383#0      TAGCGATCGCTTCCAGCAGCAATAGCAGCAGCAGCAGCAGCA-GCAG------TT----- 585
consensus_8383#2      TAGCGATCGCTTCCAGCAGCAATAGCAGCAGCAGCAGCAGCA-GCAGCAGCAGTT----- 187
consensus_8383#1      GCCATATCGCG-CAAGCGATAACAAATGTTGTGGAGTTATTATGCATTTTAACTTCCAGG 195
                           *****  * ***   ** *   *  *  *    *  * ***       **     

consensus_8383#0      -GTTCGTCTAATGAGGCAATCAACAGAGCTATGCTGAT--CGAAAAGCCCGCCCT-ATCA 641
consensus_8383#2      -GTTCGTCTAATGAGGCAATCAACAGAGCTATGCTGAT--CGAAAAGCCCGCCCT-ATCA 243
consensus_8383#1      GGCCATTCTTTTCTAATAAGCATTTTTGCTATGAGGTTAGCGTATGGTTAGTTTTCGTTG 255
                       *    ***  *     ** **     ******  * *  ** *  *   *   *  *  

consensus_8383#0      ACTTACAGTGATAGTGTCTGT---TCCTCCGGTCGAGATGCCGAGACAGC--CCAGAATC 696
consensus_8383#2      ACTTACAGTGATAGTGTCTGT---TCCTCCGGTCGAGATGCCGAGACAGC--CCAGAATC 298
consensus_8383#1      AATGAGAAAGAGATTCTGTAAGAACCTTTTGTTCCGAGTACTATAACTACTGCCCCCCTC 315
                      * * * *  ** * * * *      * *  * **    * *    **  *  **    **

consensus_8383#0      AAAGGAACGAATCGAAACC---ACTGGATTCGCCCCCCTTGTCTGCAAGCTCCTTGAG-T 752
consensus_8383#2      AAAGGAACGAATCGAAACC---ACTGGATTCACCCCCCTTGTCTGCAAGCTCCTTGAG-T 354
consensus_8383#1      GAGCGTCCATAAATATATTTAAACAAAAAAAAAAAAACAAGCAAGAAAACGCATAAAAAC 375
                       *  *  *  *   * *     **   *         *  *   * ** * * *  *   

consensus_8383#0      GATAGTTCTAGCCACGAGCA-GCCAGCAGTAGCAGCAGCATCAGCGCCTCCGAAATCGCG 811
consensus_8383#2      GATAGTTCTAGCCACGAGCA-GCCAGCAGTAGCAGCAGCATCAGCGCCTCCTAAATCGCG 413
consensus_8383#1      GATAACACAAGACTGTAATACGCCAGGAGGAAAACGCATGCAAGATTGTTTTACGTGGGC 435
                      ****   * ** *   *  * ***** ** *  *        **    *   *  * *  

consensus_8383#0      CACTCACATTTTGCGCAATTTGTTCTTC--TCGCTTCCCAACAGC---ACGGAATCGAAC 866
consensus_8383#2      CACTCACATTTTGCGCAATTTGTTCTTC--TCGCTTCCCAACAGC---ACGGAATCGAAC 468
consensus_8383#1      CACACACCTCCTGTG-AGTCCACCCCAAAATTGCTCGTAGATCCTTCGACGAGGCTTCAT 494
                      *** *** *  ** * * *     *     * ***     *       ***       * 

consensus_8383#0      GCGCCGACGGAGGCTACG---GTAGAATGCGGACAAGTGACTGTCCCGGGT--ACACGTG 921
consensus_8383#2      GCGCCGACGGAGGCTACG---GTAGAATGCGGACAAGTGACTGTCCCGGGT--ACACGTG 523
consensus_8383#1      GCGTGAACAAAAAAAAAGTAAACATAATTCATAATATTAATAAGCACTAGACAACGAGAG 554
                      ***   **  *    * *     * *** *  *  * * *    * *  *   **  * *

consensus_8383#0      CGAAGACCGCTT-CCGCCCCATTAACT----ACTCCCCTATCTCCATCGTCCCCTTCCAC 976
consensus_8383#2      CGAAGACCGCTT-CCGCCCCATTAACT----ACTCCCCTATCTCCATCGTCCCCTTCCAC 578
consensus_8383#1      CGCGGATCTATTATTATGCCAAAATCAGGAGAGCGTGTTAGTTTGGTTGTTTGGTCGTTT 614
                      **  ** *  **      ***  * *     *      **  *   * **    *     

consensus_8383#0      ATCTTCCGCTCCGTCGACGACGCTCACAGGGCCTTCCGCGAGCACGCAATCATGAACCGG 1036
consensus_8383#2      ATCTTCCGCTCCGTCGACGACGCTCACAGGGCCTTCTGCGAGCACGCAATCATGAACCGG 638
consensus_8383#1      ATTTTTCTCCACTACTACAACAACCCGAGGAGA----GAGAATGAGAGACCATAGA---A 667
                      ** ** * *  *  * ** **   *  ***       * **    *  * ***  *    

consensus_8383#0      CCTCCATGCGTTTGCGATGGCCAATTGTTGATTGTTCCACGGACGGACAATCAGATTGCC 1096
consensus_8383#2      CCTCCATGCGTTTGCGATGGCCAAT----------------------------------- 663
consensus_8383#1      GCGATGAGTGTTCCGGGAGATAGATTTTTTTT---------------------------- 699
                       *     * ***   *  *    **                                   

consensus_8383#0      ATATCGCGCAAGCGATAACAAATGTTGTGGAGTTATTATGCATTTTAACTTCCAGGGGCC 1156
consensus_8383#2      ------------------------------------------------------------
consensus_8383#1      ------------------------------------------------------------
                                                                                  

consensus_8383#0      ATTCTTTTCTAATAAGCATTTTTGCTATGAGGTTAGCGTATGGTTAGTTTTCGTTGAATG 1216
consensus_8383#2      ------------------------------------------------------------
consensus_8383#1      ------------------------------------------------------------
                                                                                  

consensus_8383#0      AGAAAGAGATTCTGTAAGAACCTTTTGTTCCGAGTACTATAACTACTGCCCCCCTCGAGC 1276
consensus_8383#2      ------------------------------------------------------------
consensus_8383#1      ------------------------------------------------------------
                                                                                  

consensus_8383#0      GTCCATAAATATATTTAAACAAAAAAAAAAAAACAAGCAAGAAAACGCATAAAAACGATA 1336
consensus_8383#2      ------------------------------------------------------------
consensus_8383#1      ------------------------------------------------------------
                                                                                  

consensus_8383#0      ACACAAGACTGTAATACGCCAGGAGGAAAACGCATGCAAGATTGTTTTACGTGGGCCACA 1396
consensus_8383#2      ------------------------------------------------------------
consensus_8383#1      ------------------------------------------------------------
                                                                                  

consensus_8383#0      CACCTCCTGTGAGTCCACCCCAAAATTGCTCGTAGATCCTTCGACGAGGCTTCATGCGTG 1456
consensus_8383#2      ------------------------------------------------------------
consensus_8383#1      ------------------------------------------------------------
                                                                                  

consensus_8383#0      AACAAAAAAAAAGTAAACATAATTCATAATATTAATAAGCACTAGACAACGAGAGCGCGG 1516
consensus_8383#2      ------------------------------------------------------------
consensus_8383#1      ------------------------------------------------------------
                                                                                  

consensus_8383#0      ATCTATTATTATGCCAAAATCAGGAGAGCGTGTTAGTTTGTTTGGTTGTTCGTTTATTTT 1576
consensus_8383#2      ------------------------------------------------------------
consensus_8383#1      ------------------------------------------------------------
                                                                                  

consensus_8383#0      TCTCCACTACTACAACAACCCGAGGAGAGAGAATGAGAGACAATAGAAGCGATGAGTGTT 1636
consensus_8383#2      ------------------------------------------------------------
consensus_8383#1      ------------------------------------------------------------
                                                                                  

consensus_8383#0      CCGGGAGATAGATTTTTTTGTTAGATAAGACACTATTAGGTAGACAGATATGGTAGCAAG 1696
consensus_8383#2      ------------------------------------------------------------
consensus_8383#1      ------------------------------------------------------------
                                                                                  

consensus_8383#0      AAATTAGTGTCGTTGGAGAATAGGAAATTAAAGAATTACAACGTTCATGCTATTTAAGAT 1756
consensus_8383#2      ------------------------------------------------------------
consensus_8383#1      ------------------------------------------------------------
                                                                                  

consensus_8383#0      AGAGGGTGAATAGGAGAGAAA 1777
consensus_8383#2      ---------------------
consensus_8383#1      ---------------------
                                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)