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Anopheles gambiae
cluster # 8401 cluster # 8401       Sequences # 10       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8401#0 length = 1114 sequences # 6  
consensus_8401#1 length = 899 sequences # 1  
consensus_8401#2 length = 701 sequences # 1  
consensus_8401#3 length = 258 sequences # 1  
consensus_8401#4 length = 127 sequences # 1  

consensusID : consensus_8401#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1114
fasta sequence
                              [CCNCGGTTATTNTTCGCGTCGGGTTAATCCTGTGATTCTGCCATCGCCTCAAAACGTGCCCTAGCCGCGTGTGTTGAGCTGAAATTGTGCGGTGCAGACGTTCGGTGCGCGTAAAGTCGAGATAGCGCAATCAAACAAATTCGAATCCGATCATGTGGTGCTGAGAAAAATAACATCCATCCAGTTGGTGCGTAAACACGTGTNCGTGTGTGATGTGTGTGCATGTGTGTTATTTCGTTTGATAGCACNGGTTTCAGCTANAGACCTCTCCTTTCCTGTATCAGCTGTTGCGCTGCGAGTGCACAGGATAAAGCAGATCAACACAGGTTTAGAGCAGGC-ATTTGCATTTACAC-AGTTTACAC-AATTCTCACAACCTCAGCAAAGGTGAAC-CAA-AATGTCCTCCGATGGAGACGATTACGATGTGCTCGTCTTTGGATCGTGCATAGTGGATTTTATAAGCTACGTGCC-GCGTTTGCCCAAGGTCG-GCGAAACCCTCCATGGCACCCGGTTTGC-GACG-GGCAATGGTGGCAAGGGCGCGAACCAGTGTGTGGCCGCCGCCCGGCTCGGCAGCCGT-ACCGCTTTCTTCGGCAAGCTGGGTGACGATCCGTGGGGTGCGGCCTACCGCACTGCCCTGGCCGCGGAAGGTGTCAACGTGGAGCAGGTCGATCTGCTGCCCGGCGAAAGCACCGGTATCGCACAGATCAACGTAGCCGACAATGGGGACAATCAGATCGTCATCGTGACCGGTGCGAACAAACGTCTCGCCCCGGTGGATGCGTTCCGCCGGCCGGAACTTTTCGTGCGGGCGCGCGTGCTGGTGTGCCAGCTGGAGACACCGATCGATGGGACGATCGCTGCCATGCAATCGTTCCGGGGCATCTCGATCCTGAATGCGGCCCCGGCGGACACGAATCTG-CCCCGTGTGATACTATCCCTCCCGAGCATATTCTGCGTGAACGAAACGGAAGCCGCACTAATAGCGGGCATGCCGAGTGTTGCCAACGTTCAACAGGCGAAAGTGGCCACCCGCAAGCTGCAGACCATGGGATGC-AAAACGGTCATCGTAACGCTGGGCGAAAAGGGAGCCGTCTTTGCGCGAGCACTGGACGATAAT]

[+] EMBL AL693247             [CCNCGGTTATTNTTCGCGTCGGGTTAATCCTGTGATTCTGCCATCGCCTCAAAACGTGCCCTAGCCGCGTGTGTTGAGCTGAAATTGTGCGGTGCAGACGTTCGGTGCGCGTAAAGTCGAGATAGCGCAATCAAACAAATTCGAATCCGATCATGTGGTGCTGAGAAAAATAACATCCATCCAGTTGGTGCGTAAACACGTGTNCGTGTGTGATGTGTGTGCATGTGTGTTATTTCGTTTGATAGCACNGGTTTCAGCTANAGACCTCTCCTTTCCTGTATCAGCTGTTGCGCTGCGAGTGCACAGGATAAAGCAGATCAACACAGGTTTAGAGCAGGCGATTGGCATTTACACTAGTTTACACAAATTCTCACAAGCTCAGCAAAGGTGAACTCAATAATGTCCTCCGATGGAGACGATTACGATGTGCTCGTCTTTGGATCGTGCATAGTGGATTTTATAAGCTACGTGCCAGCGTTTG CCAAGGTCGTGCGAAACCCTCCATGG ACCCGGTTTGCAGACGAGGCAATGGTGGCAAGGGCGCGAACCAGTGTGTGGACGACG CCGGCTCGGCAGCCGTCACCGNTTTCTTCGGCAAGCTGGGTGACGATCCGTGGGGTGCGG CTA CG ACTGACCTGG CGNGGAAGGTGTC ACGTGGAGCA GTCGATCTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX620846             [                                                                                                                                                                                                                                                                                                             tgaAGGAT AAGCAGAT AACA AGGTTTAGAG AGGC ATTTGCATTTACAC AGTTTACAC AATTCTCACAACCTCAGCAAAGGTGAAC CAA AATGTCCTCCGATGGAGACGATTACGATGTGCTCGTCTTTGGATCGTGCATAGTGGATTTTATAAGCTACGTGCC GCGTTTGCCCAAGGTCG GCGAAACCCTCCATGGCACCCGGTTTGC GACG GGCAATGGTGGCAAGGGCGCGAACCAGTGTGTGGCCGCCGCCCGGCTCGGCAGCCGT ACCGCTTTCTTCGGCAAGCTGGGTGACGATCCGTGGGGTGCGGCCTACCGCACTGCCCTGGCCGCGGAAGGTGTCAACGTGGAGCAGGTCGATCTGCTGCCCGGCGAAAGCACCGGTATCGCACAGATCAACGTAGCCGACAATGGGGACAATCAGATCGTCATCGTGACCGGTGCGAACAAACGTCTCGCCCCGGTGGATGCGTTCCGCCGGCCGGAACTTTTCGTGCGGGCGCGCGTGCTGGTGTGCCAGCTGGAGACACCGATCGATGGGACGATCGCTGCCATGCAATCGTTCCGGGGCATCTCGATCCTGAATGCGGNCCCGGCGGACACGAATCTGCCCCCGTGTGATACTATCCCTCCCGAGCATATTCTGCGTGAACGAAACGGAAGCCGCACTAA                                                                                                                                          ]
[+] EMBL BX607329             [                                                                                                                                                                                                                                                                                                                                             agAGGC ATTTACATTTACAC AGTTTACAC AATTCTCACAACCTCAGCAAAGGTGAAC CAA AATGTCCTCCGATGGAGACGATTACGATGTGCTCGTCTTTGGATCGTGCATAGTGGATTTTATAAGCTACGTGCC GCGTTTGCCCAAGGTCG GCGAAACCCTCCATGGCTCCCGGTTTGC GACG GGTAATGGTGGCAAGGGCGCGAACCAGTGTGTGGCCGCCGCCCGGCTCGGCAGCCGT ACCGCTTTGTTCGGCAAGCTGGGTGACGATCCGTGGGGTGCGGCCTACCGCACTGCCCTGGCCGCGGAAGGTGTCAACGTGGAGCAGGTCGATCTGCTGCCCGGCGAAAGCACCGGTATCGCACAGATCAACGTAGCCGACAATGGGGACAATCAGATCGTCATCGTGACCGGTGCGAACAAACGTCTCGCCCCGGTGGATGCGTTCCGCCGGCCGGAACTTTTCGTGCGGGCGCGCGTGCTGGTGTGCCAGCTGGAGACACCGATCGATGGGACGATCGCTGCCATGCAATCGTTCCGGGGCATCTCGATCCTGAATGCGGCCCCGGCGGACACGAATCTG CCCCGTGTGATACTATCCCTCCCGAGCATATTCTGCGTGAACGAAACGGAAGCCGCACTAATAGCGGGCATGCCGAGTGTTGCCAACGTTCAACAGGCGAAAGTGGCCACCCGCAAGCTGCAGACCATGGGATGC AAAACGGTCATCGTAACGCTGGGCGAA                                    ]
[+] EMBL BX619974             [                                                                                                                                                                                                                                                                                                                                                                AC AGTTTACAC AATTCTCACAACCTCAGCAAAGGTGAAC CAA AATGTCCTCCGATGGAGACGATTACGATGTGCTCGTCTTTGGATCGTGCATAGTGGATTTTATAAGCTACGTGCC GCGTTTGCCCAAGGTCG GCGAAACCCTCCATGGCACCCGGTTTGC GACG GGCAATGGTGGCAAGGGCGCGAACCAGTGTGTGGCCGCCGCCCGGCTCGGCAGCCGT ACCGCTTTCTTCGGCAAGCTGGGTGACGATCCGTGGGGTGCGGCCTACCGCACTGCCCTGGCCGCGGAAGGTGTCAACGTGGAGCAGGTCGATCTGCTGCCCGGCGAAAGCACCGGTATCGCACAGATCAACGTAGCCGACAATGGGGACAATCAGATCGTCATCGTGACCGGTGCGAACAAACGTCTCGCCCCGGTGGATGCGTNCCGCCGGCCGGAACTTTTCGTGCGGGCGCGCGTGCTGGTGTGCCAGCTGGAGACACCGATCGATNNGACGATCGCTGCCATGCAATCGTTCCNGGGCATCTCGATCCTGAATGCGGCCCCGGCGGACACGAATCTG CCCCGTGTGATACTATCCCTCCCGAGCATNTTCT                                                                                                                                                                     ]
[+] EMBL BX627857             [                                                                                                                                                                                                                                                                                                                                                                                       ACCTCAGCAAAGGTGAAC CAA AATGTCCTCCGATGGAGACGATTACGATGTGCTCGTCTTTGGATCGTGCATAGTGGATTTTATAAGCTACGTGCC GCGTTTGCCCAAGGTCG GCGAAACCCTCCATGGCACCCGGTTTGC GACG GGCAATGGTGGCAAGGGCGCGAACCAGTGTGTGGCCGCCGCCCGGCTCGGCAGCCGT ACCGCTTTCTTCGGCAAGCTGGGTGACGATCCGTGGGGTGCGGCCTACCGCACTGCCCTGGCCGCGGAAGGTGTCAACGTGGAGCAGGTCGATCTGCTGCCCGGCGAAAGCACCGGTATCGCACAGATCAACGTAGCCGACAATGGGGACAATCAGATCGTCATCGTGACCGGTGCGAACAAACGTCTCGCCCCGGTGGATGCGTTCCGCCGGCCGGAACTTTTCGTGCGGGCGCGCGTGCTGGTGTGCCAGCTGGAGACACCGATCGATGGGACGATCGCTGCCATGCAATCGTTCCGGGGCATCTCGATCCTGAATGCGGCCCCGGCGGACACGAATCTG CCCCGTGTGATACTATCCCTCCCGAGCATATTCTGCGTGAACGAAA                                                                                                                                                         ]
[+] EMBL BX623865             [                                                                                                                                                                                                                                                                                                                                                                                                                           GGAGACGATTACGATGTGCTCGTCTTTGGATCGTGCATAGTGGATTTTATAAGCTACGTGCC GCGTTTGCCCAAGGTCG GCGAAACCCTCCATGGCACCCGGTTTGC GACG GGCAATGGTGGCAAGGGCGCGAACCAGTGTGTGGCCGCCGCCCGGCTCGGCAGCCGT ACCGCTTTCTTCGGCAAGCTGGGTGACGATCCGTGGGGTGCGGCCTACCGCACTGCCCTGGCCGCGGAAGGTGTCAACGTGGAGCAGGTCGATCTGCTGCCCGGCGAAAGCACCGGTATCGCACAGATCAACGTAGCCGACAATGGGGACAATCAGATCGTCATCGTGACCGGTGCGAACAAACGTCTCGCCCCGGTGGATGCGTTCCGCCGGCCGGAACTTTTCGTGCGGGCGCGCGTGCTGGTGTGCCAGCTGGAGACACCGATCGATGGGACGATCGCTGCCATGCAATCGTTCCGGGGCATCTCGATCCTGAATGCGGCCCCGGCGGACACGAATCTG CCCCGTGTGATACTATCCCTCCCGAGCATATTCTGCGTGAACGAAACGGAAGCCGCACTAATAGCGGGCATGCCGAGTGTGGCCGACGTTCAACAGGCGAAAGTGGCCACCCGCNAGCTGCAGACCATGGGATGCAAAAACGGTCATCGTAACGCTGGGCGAAAAGGGAGCCGTCTTTGCGCGAGCACTGGACGATAAT]


>consensus_8401#0 CCNCGGTTATTNTTCGCGTCGGGTTAATCCTGTGATTCTGCCATCGCCTCAAAACGTGCC CTAGCCGCGTGTGTTGAGCTGAAATTGTGCGGTGCAGACGTTCGGTGCGCGTAAAGTCGA GATAGCGCAATCAAACAAATTCGAATCCGATCATGTGGTGCTGAGAAAAATAACATCCAT CCAGTTGGTGCGTAAACACGTGTNCGTGTGTGATGTGTGTGCATGTGTGTTATTTCGTTT GATAGCACNGGTTTCAGCTANAGACCTCTCCTTTCCTGTATCAGCTGTTGCGCTGCGAGT GCACAGGATAAAGCAGATCAACACAGGTTTAGAGCAGGCATTTGCATTTACACAGTTTAC ACAATTCTCACAACCTCAGCAAAGGTGAACCAAAATGTCCTCCGATGGAGACGATTACGA TGTGCTCGTCTTTGGATCGTGCATAGTGGATTTTATAAGCTACGTGCCGCGTTTGCCCAA GGTCGGCGAAACCCTCCATGGCACCCGGTTTGCGACGGGCAATGGTGGCAAGGGCGCGAA CCAGTGTGTGGCCGCCGCCCGGCTCGGCAGCCGTACCGCTTTCTTCGGCAAGCTGGGTGA CGATCCGTGGGGTGCGGCCTACCGCACTGCCCTGGCCGCGGAAGGTGTCAACGTGGAGCA GGTCGATCTGCTGCCCGGCGAAAGCACCGGTATCGCACAGATCAACGTAGCCGACAATGG GGACAATCAGATCGTCATCGTGACCGGTGCGAACAAACGTCTCGCCCCGGTGGATGCGTT CCGCCGGCCGGAACTTTTCGTGCGGGCGCGCGTGCTGGTGTGCCAGCTGGAGACACCGAT CGATGGGACGATCGCTGCCATGCAATCGTTCCGGGGCATCTCGATCCTGAATGCGGCCCC GGCGGACACGAATCTGCCCCGTGTGATACTATCCCTCCCGAGCATATTCTGCGTGAACGA AACGGAAGCCGCACTAATAGCGGGCATGCCGAGTGTTGCCAACGTTCAACAGGCGAAAGT GGCCACCCGCAAGCTGCAGACCATGGGATGCAAAACGGTCATCGTAACGCTGGGCGAAAA GGGAGCCGTCTTTGCGCGAGCACTGGACGATAAT



consensusID : consensus_8401#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 899
fasta sequence
                              [NGTGTGTAATTTCGATCTTCGTTTGCCCCTTCACCATGCAATCNTGCGCGTTTTCCCAGTCGCTAAACCCTCCATTGAACCCNGGTTTGCGGGNCAGTGGTTGNCAAGGGCACGACCAGTTGNTGGCGCCCCGCCCGGGTCCGCAACCCGTCCCCCGTTTNTNTGCGGCAACTTGGGGTTACAATCCGTGGGGTTCCGCCTATCCCGCATCTCTCACTGGTCCNCGGGAAGGGTNTCAATCGTGGACCCAAGGTTCGTATTCTTGCTTGCCCCGGCGATAAGNCACCCGGTATCGCCACAGATCACCGTAGCCGCACTATGGGGACAATCAGATCGTCATCGTGACCGGTGCNAACAACGTCTCGCCCCGGTGATGCGTTCCGCCGGCCGGAACTTTTCGTGCGGGCGCGCGTGCTGGTGTCCAGCTGGGAGACACCGATCGATGGGACGATCGCTGCCATGCAATCGTTCCGGGGCATCTCGATCCTGAATGCGGCCCCGGCGGACACGAATCTGCCCCGTGTGATACTATCCCTCCCGAGCATATTCTGCGTGAACGAAACGGAAGCCGCACTAATAGCGGGCATGCCGAGTGTGGCCGACGTTCAACAGGCGAAAGTGGCCACCCGCATAGCTGCAGTACCATGGGATGCAAAACGGTCATCGTAACGCTGGGCGAAAAGGGAGCCGTCTTTGCGCGAGCACTGGACGTATAATGGCGTACGGACAAGTGTACCACGTGAAGCCGCTGAAGGTGGACAAGGTCGTGGATACAACGGGTGCTGGTGATGCATTTATCGGTGCACTGGCGCATTGCCTAGCGAACTATCCCGATGCAAAGTTGGGAAATTGTATTGCGCCGCCAATCGGTGCCGCATGTCCGTATAACCTCGGGGATC]

[-] EMBL AL933198             [NGTGTGTAATTTCGATCTTCGTTTGCCCCTTCACCATGCAATCNTGCGCGTTTTCCCAGTCGCTAAACCCTCCATTGAACCCNGGTTTGCGGGNCAGTGGTTGNCAAGGGCACGACCAGTTGNTGGCGCCCCGCCCGGGTCCGCAACCCGTCCCCCGTTTNTNTGCGGCAACTTGGGGTTACAATCCGTGGGGTTCCGCCTATCCCGCATCTCTCACTGGTCCNCGGGAAGGGTNTCAATCGTGGACCCAAGGTTCGTATTCTTGCTTGCCCCGGCGATAAGNCACCCGGTATCGCCACAGATCACCGTAGCCGCACTATGGGGACAATCAGATCGTCATCGTGACCGGTGCNAACAACGTCTCGCCCCGGTGATGCGTTCCGCCGGCCGGAACTTTTCGTGCGGGCGCGCGTGCTGGTGTCCAGCTGGGAGACACCGATCGATGGGACGATCGCTGCCATGCAATCGTTCCGGGGCATCTCGATCCTGAATGCGGCCCCGGCGGACACGAATCTGCCCCGTGTGATACTATCCCTCCCGAGCATATTCTGCGTGAACGAAACGGAAGCCGCACTAATAGCGGGCATGCCGAGTGTGGCCGACGTTCAACAGGCGAAAGTGGCCACCCGCATAGCTGCAGTACCATGGGATGCAAAACGGTCATCGTAACGCTGGGCGAAAAGGGAGCCGTCTTTGCGCGAGCACTGGACGTATAATGGCGTACGGACAAGTGTACCACGTGAAGCCGCTGAAGGTGGACAAGGTCGTGGATACAACGGGTGCTGGTGATGCATTTATCGGTGCACTGGCGCATTGCCTAGCGAACTATCCCGATGCAAAGTTGGGAAATTGTATTGCGCCGCCAATCGGTGCCGCATGTCCGTATAACCTCGGGGATC]


>consensus_8401#1 NGTGTGTAATTTCGATCTTCGTTTGCCCCTTCACCATGCAATCNTGCGCGTTTTCCCAGT CGCTAAACCCTCCATTGAACCCNGGTTTGCGGGNCAGTGGTTGNCAAGGGCACGACCAGT TGNTGGCGCCCCGCCCGGGTCCGCAACCCGTCCCCCGTTTNTNTGCGGCAACTTGGGGTT ACAATCCGTGGGGTTCCGCCTATCCCGCATCTCTCACTGGTCCNCGGGAAGGGTNTCAAT CGTGGACCCAAGGTTCGTATTCTTGCTTGCCCCGGCGATAAGNCACCCGGTATCGCCACA GATCACCGTAGCCGCACTATGGGGACAATCAGATCGTCATCGTGACCGGTGCNAACAACG TCTCGCCCCGGTGATGCGTTCCGCCGGCCGGAACTTTTCGTGCGGGCGCGCGTGCTGGTG TCCAGCTGGGAGACACCGATCGATGGGACGATCGCTGCCATGCAATCGTTCCGGGGCATC TCGATCCTGAATGCGGCCCCGGCGGACACGAATCTGCCCCGTGTGATACTATCCCTCCCG AGCATATTCTGCGTGAACGAAACGGAAGCCGCACTAATAGCGGGCATGCCGAGTGTGGCC GACGTTCAACAGGCGAAAGTGGCCACCCGCATAGCTGCAGTACCATGGGATGCAAAACGG TCATCGTAACGCTGGGCGAAAAGGGAGCCGTCTTTGCGCGAGCACTGGACGTATAATGGC GTACGGACAAGTGTACCACGTGAAGCCGCTGAAGGTGGACAAGGTCGTGGATACAACGGG TGCTGGTGATGCATTTATCGGTGCACTGGCGCATTGCCTAGCGAACTATCCCGATGCAAA GTTGGGAAATTGTATTGCGCCGCCAATCGGTGCCGCATGTCCGTATAACCTCGGGGATC



consensusID : consensus_8401#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 701
fasta sequence
                              [CCGGTAAACTGTTTACACCCTTGCTCTTAACCTCGTGGTAGGCATGGTGATGCCGACGATGATGGTGATGACGATGATGATGGTTGTCCATAATGTCGTCGGACGTCGCGTATTGTGCGGATTATTCGAGTCGGGTTAATTTTGTGAATTCGCCATCGCCTCAAAACGTCCCCCAGCCGCGTGTGTTGAGTGAAATTGTGCGGTGCAGCGTTCGGTGCGCGTAAAGCGAATAGCGCAATAAACAAATTCGAATCCAACCATGTGGTGCTGAGAGAAAAACATCCATCCAGTTGGTGCGTAAAACGTGTGCGTGTGCGTGTGTGTGTGTGCATGTGTGTTATATCGTTTGATGACGGGTTTCAGTAAACCTCTCCTTTTCTTATCAGCTGTTGCGCTGCAGTGAAGGATAAGCAGATAACAAGGTGTAGAGAGGCATTTGCATTTACACAGTTTACACAATTCTCACAACCTCAGCAAAGGTGAACCAAAATGTCCTCCGATGGAGACGATTACGATGTGCTCGTCTTTGGATCGTGCATAGTGGATTTTATAAGGTTGGCCAGTTTTTCTTTGTTGTTGTGTGCGTTCCTCACCACGACCAGTGGTGTGTGTGTGAAGTTTAACGATCCTGTTCTATTGTTGCTCCTTCCAACCCATCCAGCTACGTGCCGCGTTTGCCCAAGGTCGGCGAAACCCTCCAT]

[+] EMBL BM603697             [CCGGTAAACTGTTTACACCCTTGCTCTTAACCTCGTGGTAGGCATGGTGATGCCGACGATGATGGTGATGACGATGATGATGGTTGTCCATAATGTCGTCGGACGTCGCGTATTGTGCGGATTATTCGAGTCGGGTTAATTTTGTGAATTCGCCATCGCCTCAAAACGTCCCCCAGCCGCGTGTGTTGAGTGAAATTGTGCGGTGCAGCGTTCGGTGCGCGTAAAGCGAATAGCGCAATAAACAAATTCGAATCCAACCATGTGGTGCTGAGAGAAAAACATCCATCCAGTTGGTGCGTAAAACGTGTGCGTGTGCGTGTGTGTGTGTGCATGTGTGTTATATCGTTTGATGACGGGTTTCAGTAAACCTCTCCTTTTCTTATCAGCTGTTGCGCTGCAGTGAAGGATAAGCAGATAACAAGGTGTAGAGAGGCATTTGCATTTACACAGTTTACACAATTCTCACAACCTCAGCAAAGGTGAACCAAAATGTCCTCCGATGGAGACGATTACGATGTGCTCGTCTTTGGATCGTGCATAGTGGATTTTATAAGGTTGGCCAGTTTTTCTTTGTTGTTGTGTGCGTTCCTCACCACGACCAGTGGTGTGTGTGTGAAGTTTAACGATCCTGTTCTATTGTTGCTCCTTCCAACCCATCCAGCTACGTGCCGCGTTTGCCCAAGGTCGGCGAAACCCTCCAT]


>consensus_8401#2 CCGGTAAACTGTTTACACCCTTGCTCTTAACCTCGTGGTAGGCATGGTGATGCCGACGAT GATGGTGATGACGATGATGATGGTTGTCCATAATGTCGTCGGACGTCGCGTATTGTGCGG ATTATTCGAGTCGGGTTAATTTTGTGAATTCGCCATCGCCTCAAAACGTCCCCCAGCCGC GTGTGTTGAGTGAAATTGTGCGGTGCAGCGTTCGGTGCGCGTAAAGCGAATAGCGCAATA AACAAATTCGAATCCAACCATGTGGTGCTGAGAGAAAAACATCCATCCAGTTGGTGCGTA AAACGTGTGCGTGTGCGTGTGTGTGTGTGCATGTGTGTTATATCGTTTGATGACGGGTTT CAGTAAACCTCTCCTTTTCTTATCAGCTGTTGCGCTGCAGTGAAGGATAAGCAGATAACA AGGTGTAGAGAGGCATTTGCATTTACACAGTTTACACAATTCTCACAACCTCAGCAAAGG TGAACCAAAATGTCCTCCGATGGAGACGATTACGATGTGCTCGTCTTTGGATCGTGCATA GTGGATTTTATAAGGTTGGCCAGTTTTTCTTTGTTGTTGTGTGCGTTCCTCACCACGACC AGTGGTGTGTGTGTGAAGTTTAACGATCCTGTTCTATTGTTGCTCCTTCCAACCCATCCA GCTACGTGCCGCGTTTGCCCAAGGTCGGCGAAACCCTCCAT



consensusID : consensus_8401#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 258
fasta sequence
                              [AGCCAGAATCGCCACGAGGTTATAGTGGATTTATAAGCTACGTGCCGCGTTTGCCCAATGTCGGCGAAACCCTCCATGGCACCCGGTTTGCGACGGGCAATGGTGGCAAGGGCGCGAACCAGTGTGTGGCCGCCGCCCGGCTCGGCAGCCGTACCGCTTTCTTCGGCAAGCTGGGTGACGATCCGTGGGGTGCGGCCTACCGCACTGCCCTGNGCCGCGGAAGGTGTACAACGTGGAGCAGGTCGATCTGATGCCCGG]

[+] EMBL BX466595             [AGCCAGAATCGCCACGAGGTTATAGTGGATTTATAAGCTACGTGCCGCGTTTGCCCAATGTCGGCGAAACCCTCCATGGCACCCGGTTTGCGACGGGCAATGGTGGCAAGGGCGCGAACCAGTGTGTGGCCGCCGCCCGGCTCGGCAGCCGTACCGCTTTCTTCGGCAAGCTGGGTGACGATCCGTGGGGTGCGGCCTACCGCACTGCCCTGNGCCGCGGAAGGTGTACAACGTGGAGCAGGTCGATCTGATGCCCGG]


>consensus_8401#3 AGCCAGAATCGCCACGAGGTTATAGTGGATTTATAAGCTACGTGCCGCGTTTGCCCAATG TCGGCGAAACCCTCCATGGCACCCGGTTTGCGACGGGCAATGGTGGCAAGGGCGCGAACC AGTGTGTGGCCGCCGCCCGGCTCGGCAGCCGTACCGCTTTCTTCGGCAAGCTGGGTGACG ATCCGTGGGGTGCGGCCTACCGCACTGCCCTGNGCCGCGGAAGGTGTACAACGTGGAGCA GGTCGATCTGATGCCCGG



consensusID : consensus_8401#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 127
fasta sequence
                              [CTCGCCCCGGAGGATGCGTACGGCCGGCGGGAACTTGTCGGGCGGGCGCGCGGGGTGGTGTGCCAGCTGGAGACACCGATCGATGGGACGATCGCTGCCATGCAAGCGTACTGGGGCATCGCGATCC]

[+] EMBL BX614870             [CTCGCCCCGGAGGATGCGTACGGCCGGCGGGAACTTGTCGGGCGGGCGCGCGGGGTGGTGTGCCAGCTGGAGACACCGATCGATGGGACGATCGCTGCCATGCAAGCGTACTGGGGCATCGCGATCC]


>consensus_8401#4 CTCGCCCCGGAGGATGCGTACGGCCGGCGGGAACTTGTCGGGCGGGCGCGCGGGGTGGTG TGCCAGCTGGAGACACCGATCGATGGGACGATCGCTGCCATGCAAGCGTACTGGGGCATC GCGATCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8401#1      ------------------------------------------------------------
consensus_8401#4      ------------------------------------------------------------
consensus_8401#0      CCNCGGTTATTNTTCGCGTCGGGTTAATCCTGTGATTCTGCCATCGCCTCAAAACGTGCC 60
consensus_8401#3      ------------------------------------------------------------
consensus_8401#2      ------------------------------------------------------------
                                                                                  

consensus_8401#1      -------------------------------------------------------NGTGT 5
consensus_8401#4      ------------------------------------------------------------
consensus_8401#0      CTAGCCGCGTGTGTTGAGCTGAAATTGTGCGGTGCAGACGTTCGGTGCGCGTAAAGTCGA 120
consensus_8401#3      ------------------------------------------------------------
consensus_8401#2      ------------------------------------------------------------
                                                                                  

consensus_8401#1      GTAATTTCGATCTTCGTTTGCCCCTTCACCATGCAATCNTGCGCGTTTTCCCAGTCGCTA 65
consensus_8401#4      ------------------------------------------------------------
consensus_8401#0      GATAGCGCAATCAAACAAATTCGAATCCGATCATGTGGTGCTGAGAAAAATAACATCCAT 180
consensus_8401#3      ------------------------------------------------------------
consensus_8401#2      ------------------------------------------------------------
                                                                                  

consensus_8401#1      AACCCTCCATTGAACCCNGGTTTGCGGGNCAGTGGTTGNCAAGGGCACGACCAGTTGNTG 125
consensus_8401#4      ------------------------------------------------------------
consensus_8401#0      CCAGTTGGTGCGTAAACACGTGTNCGTGTGTGATGTGTGTGCATGTGTGTTATTTCGTTT 240
consensus_8401#3      ------------------------------------------------------------
consensus_8401#2      ----------------------------------CCGGTAAACTGTTTACACCCTTGCTC 26
                                                                                  

consensus_8401#1      GCGCCCCGCCCGGGTCCGCAACCCGTCCCCCGTTTNTNTGCGGCAACTTGGGGTTACAAT 185
consensus_8401#4      ------------------------------------------------------------
consensus_8401#0      GATAGCACNGGTTTCAGCTANAGACCTCTCCTTTCCTGTATCAGCTGTTGCGCTGCGAGT 300
consensus_8401#3      ------------------------------------------------------------
consensus_8401#2      TTAACCTCGTGGTAGGCATGGTGATGCCGACGATGATGGTGATGACGATGATGATGGTTG 86
                                                                                  

consensus_8401#1      CCGTGGGGTTCCGCCTATCCCGCATCTCTCACTGGTCCNCGGGAAGGGTNTCAATCGTGG 245
consensus_8401#4      ------------------------------------------------------------
consensus_8401#0      GCACAGGATAAAGCAGATCAACACAGGTTTAGAGCAGGCATTTGCATTTACACAGTTTAC 360
consensus_8401#3      ------------------------------------------------------------
consensus_8401#2      TCCATAATGTCGTCGGACGTCGCGTATTGTGCGGATTATTCGAGTCGGGTTAATTTTGTG 146
                                                                                  

consensus_8401#1      ACCCAAGGTTCGTATTCTTGCTTGCCCCGGCGATAAGNCACCCGGTATCGCCACAGATCA 305
consensus_8401#4      ------------------------------------------------------------
consensus_8401#0      ACAATTCTCACAACCTCAGCAAAGGTGAACCAAAATGTCCTCCGATGGAGACGATTACGA 420
consensus_8401#3      ---------------------------------------------------------AGC 3
consensus_8401#2      AATTCGCCATCGCCTCAAAACGTCCCCCAGCCGCGTGTGTTGAGTGAAATTGTGCGGTGC 206
                                                                                  

consensus_8401#1      CCGTAGCCGCACT-ATGGGGACAATCAGATCGTCATCGTGACCGGTGCNAACAACGTCTC 364
consensus_8401#4      ---------------------------------------------------------CTC 3
consensus_8401#0      TGTGCTCGTCTTT-GGATCGTGCATAGTGGATTTTATAAGCTACGTGCCGCGTTTGCCCA 479
consensus_8401#3      CAGAATCGCCACG-AGGTT----ATAGTGGATTT-ATAAGCTACGTGCCGCGTTTGCCCA 57
consensus_8401#2      AGCGTTCGGTGCGCGTAAAGCGAATAGCGCAATAAACAAATTCGAATCCAACCATGTGGT 266
                                                                                  

consensus_8401#1      GCCCCGGTG-ATGCGTTCC-GCCGGCCGGAACTTTTCGTGCGGGCGCG--CGTGCTGGTG 420
consensus_8401#4      GCCCCGGAGGATGCGTACG-GCCGGCGGGAACTTGTCGGGCGGGCGCG--CGGGGTGGTG 60
consensus_8401#0      AGGTCGGCGAAACCCTCCATGGCACCCGGTTTGCGACGGGCAATGGTGG-CAAGGGCGCG 538
consensus_8401#3      ATGTCGGCGAAACCCTCCATGGCACCCGGTTTGCGACGGGCAATGGTGG-CAAGGGCGCG 116
consensus_8401#2      GCTGAGAGAAAAACATCCA-TCCAGTTGGTGCGTAAAACGTGTGCGTGTGCGTGTGTGTG 325
                           *    *  * * *    *    **          *     * *  *  *   * *

consensus_8401#1      T-CCAGCTGGGAG-ACACCGATCGATG--GGACGATCGCTGCCATGCAATCGTTCCGGGG 476
consensus_8401#4      TGCCAGCTGG-AG-ACACCGATCGATG--GGACGATCGCTGCCATGCAAGCGTACTGGGG 116
consensus_8401#0      AACCAGTGTGTGG-CCGCCGCCCGGCT--CGGCAGCCGTACCGCTTTCTTCGGCAAGCTG 595
consensus_8401#3      AACCAGTGTGTGG-CCGCCGCCCGGCT--CGGCAGCCGTACCGCTTTCTTCGGCAAGCTG 173
consensus_8401#2      TGTGCATGTGTGTTATATCGTTTGATGACGGGTTTCAGTAAACCTCTCCTTTTCTTATCA 385
                               *        **   *      *      *      *               

consensus_8401#1      CATCTCGATCCTGAATGCGGCCCCGGCGGACACGAATCTGCCCCGTGTGATACTAT-CCC 535
consensus_8401#4      CATCGCGATCC------------------------------------------------- 127
consensus_8401#0      GGTGACGATCCGTGGGGTGCGGCCTACCG-CACTGCCCTGG-CCGCGGAAGGTGT--CAA 651
consensus_8401#3      GGTGACGATCCGTGGGGTGCGGCCTACCG-CACTGCCCTGNGCCGCGGAAGGTGTA-CAA 231
consensus_8401#2      GCTGTTGCGCTGCAGTGAAGGATAAGCAGATAACAAGGTGTAGAGAGGCATTTGCATTTA 445
                        *   *  *                                                  

consensus_8401#1      TCCCGAGCATATTCTGCGTGAACGAAACGGAAGCCGCACTAATAGCGGGCATGCCGAGTG 595
consensus_8401#4      ------------------------------------------------------------
consensus_8401#0      CGTGGAGCAGGTCGATCTGCTGCCCGGCGAAAGCACCGGTATCGCACAGATCAACGTAGC 711
consensus_8401#3      CGTGGAGCAGGTCGATCTGATGCCCGG--------------------------------- 258
consensus_8401#2      CACAGTTTACACAATTCTCACAACCTCAGCAAAGGTGAACCAAAATGTCC---TCCGATG 502
                                                                                  

consensus_8401#1      TGGCCGACGTTCAACAGGCGAAAGTGGCCACCCGCATAGCTGCAGTACCATGGGATGCAA 655
consensus_8401#4      ------------------------------------------------------------
consensus_8401#0      CGACAATGGGGACAATCAGATCGTCATCGTGACCGGTGCGAACAAACGTCTCGCCCCGGT 771
consensus_8401#3      ------------------------------------------------------------
consensus_8401#2      GAGACGATTACGATGTGCTCGTCTTTGGATCGTGCATAGTGGATTTTATAAGGTTGGCCA 562
                                                                                  

consensus_8401#1      AACGGTCATCGTAACGCTGGGCGAAAAGGGAGCCGTCTTTGCGCGAGCACTGGACGTATA 715
consensus_8401#4      ------------------------------------------------------------
consensus_8401#0      GGATGCGTTCCGCCGGCCGGAACTTTTCGTGCGGGCGCGCGTGCTGGTGTGCCAGCTGGA 831
consensus_8401#3      ------------------------------------------------------------
consensus_8401#2      GTTTTTCTTTGTTGTTGTGTGCGTTCCTCACCACGACCAGTGGTGTGTGTGTGAAGTTTA 622
                                                                                  

consensus_8401#1      ATGGCGTACGGACAAGTGTACCACGTGAAGCCGCTGAAGGTGGACAAGGTCGTGGATACA 775
consensus_8401#4      ------------------------------------------------------------
consensus_8401#0      GACACCGATCGATGGGACGATCGCTGCCATGCAATCGTTCCGGGGCATCTCGATCCTGAA 891
consensus_8401#3      ------------------------------------------------------------
consensus_8401#2      ACGATCCTGTTCTATTGTTGCTCCTTCCAACCCATCCAGCTACGTGCCGCGTTTGCCCAA 682
                                                                                  

consensus_8401#1      ACGGGTGCTGGTGATGCATTTATCGGTGCACTGGCGCATTGCCTAGCGAACTATCCCGAT 835
consensus_8401#4      ------------------------------------------------------------
consensus_8401#0      TGCGGCCCCGGCGGACACGAATCTGCCCCGTGTGATACTATCCCTCCCGAGCATATTCTG 951
consensus_8401#3      ------------------------------------------------------------
consensus_8401#2      GGTCGGCGAAACCCTCCAT----------------------------------------- 701
                                                                                  

consensus_8401#1      GCAAAGTTGGGAAATTGTATTGCGCCGCCAATCGGTGCCGCATGTCCGTATAACCTCGGG 895
consensus_8401#4      ------------------------------------------------------------
consensus_8401#0      CGTGAACGAAACGGAAGCCGCACTAATAGCGGGCATGCCGAGTGTTGCCAACGTTCAACA 1011
consensus_8401#3      ------------------------------------------------------------
consensus_8401#2      ------------------------------------------------------------
                                                                                  

consensus_8401#1      GATC-------------------------------------------------------- 899
consensus_8401#4      ------------------------------------------------------------
consensus_8401#0      GGCGAAAGTGGCCACCCGCAAGCTGCAGACCATGGGATGCAAAACGGTCATCGTAACGCT 1071
consensus_8401#3      ------------------------------------------------------------
consensus_8401#2      ------------------------------------------------------------
                                                                                  

consensus_8401#1      -------------------------------------------
consensus_8401#4      -------------------------------------------
consensus_8401#0      GGGCGAAAAGGGAGCCGTCTTTGCGCGAGCACTGGACGATAAT 1114
consensus_8401#3      -------------------------------------------
consensus_8401#2      -------------------------------------------
                                                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)