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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8427#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1128 fasta sequence
[TAACGGATTTCCAGCGGTGTAGTTTACTAGCTTTTCACTCCGTGGAGTAGTATTTGAGGCTTACTAAACCCCCTCACCACCGTGGTCCAGGTTTGCAGTACAGTAGCAGCTGTACCAACCGG-GTTTCAAGCAAGTTTTGCAGTCTAGCATCGCACCACTCTCGCACAGCACAATGTCGTCCACGAACGGAGCACGAAGCGGATCGCTCTACATCCTGCAAGCGTTGGTGCTGCTCTGGTCGATAGCGATGGTATCGGCCAACAAGCGATATTGTGGAGCGG-A-CTGGTAAAGGTACTGTCCTTCCTGTGTGATGAATTCCCCGATCTGCATACGACGAGCAAGCGGTCCGCTGACAACTTCGCCAAGCCGTCGGATATGGCCACGGAGGACTGGATGAACGTGGAAGACAACACGCAGCAGATACTCGATCAGCAGCTGCAGTCGGTCGGCATGCCGGATGATCGTG-CCACGGTACCCGCCTGGATGAACATGGTCTACCCATCGAACTACATGTACCGTCATGGGGCAGGACACAACGAGCTGATACCGGCCCGCTTCCGCAAGAATCGTGGTGGCATCGTGGAGGAGTGTTGTTTGCGGCCGTGCGGTATGAACCAGTTGCTGCAGTACTGCAAGAAGGTTAGCGCGTACTAAAAGGTCAACGGGAACGAGTAGACGTCGGGCAAGTGAAGCTTATACGCTCATAAGTGTGTTTGGCATATAATACTCTACTCATATTGAATGGTTTGTGTCACACGAGAAGCAGGGAAAATAGGAGGGAACAAGTCCCTGACGTAGGTCACTGATGCAGGGAATGGTTTCGTACAAAGCCGTATTATAAAGCACAACATTGAACAAAGTTGATAAACAACTCACCTTAAAATACCTTTAGCTTAGGCTCACAAGCTCTTGCTGTTATTAGAAACGCTTTCTATATTTTAACGATGTTGCTAAAAACTTGTGCGGTTGCGGCAAGCAGTCCAGACCAGATGATGTAGGGAACCACGTATTTAAGTACCTTAAATGGCTGCCAAGCATAGCTACAGATATTATTGGACTATTTGGTAAAGCATGAAAAAT-AAAAAAAAACTATCGATTATTGGCCATTTGCAAATAGCGCATGAAAAT]
[+] EMBL CNS08S62 [TAACGGATTTCCAGCGGTGTAGTTTACTAGCTTTTCACTCCGTGGAGTAGTATTTGAGGCTTACTAAACCCCCTCACCACCGTGGTCCAGGTTTGCAGTACAGTAGCAGCTGTACCAACCGG GTTTCAAGCAAGTTTTGCAGTCTAGCATCGCACCACTCTCGCACAGCACAATGTCGTCCACGAACGGAGCACGAAGCGGATCGCTCTACATCCTGCAAGCGTTGGTGCTGCTCTGGTCGATAGCGATGGTATCGGCCAACAAGCGATATTGTGGAGCGG A CTGGTAAAGGTACTGTCCTTCCTGTGTGATGAATTCCCCGATCTGCATACGACGAGCAAGCGGTCCGCTGACAACTTCGCCAAGCCGTCGGATATGGCCACGGAGGACTGGATGAACGTGGAAGACAACACGCAGCAGATACTCGATCAGCAGCTGCAGTCGGTCGGCATGCCGGATGATCGTG CCACGGTACCCGCCTGGATGAACATGGTCTACCCATCGAACTACATGTACCGTCATGGGGCAGGACACAACGAGCTGATACCGGCCCGCTTCCGCAAGAATCGTGGTGGCATCGTGGAGGAGTGTTGTTTGCGGCCGTGCGGTATGAACCAGTTGCTGCAGTACTGCAAGAAGGTTAGCGCGTACTAAAAGGTCAACGGGAACGAGTAGACGTCGGGCAAGTGAAGCTTATACGCTCATAAGTGTGTTTGGCATATAATACTCTACTCATATTGAATGGTTTGTGTCACACGAGAAGCAGGGAAAATAGGAGGGAACAAGTCCCTGACGTAGGTCACTGATGCAGGGAATGGTTTCGTACAAAGCCGTATTATAAAGCACAACATTGAACAAAGTTGATAAACAACTCACCTTAAAATACCTATAGCTTAGGCTCACAAGCTCTTGCTGTTATTAGAAACGCTTTCTATATTTTAACGATGTTGCTAAA ]
[+] EMBL CNS08WB9 [ AACGGATTTCCAGCGGTGTAGTTTACTAGCTTTTCACTCCGTGGAGTAGTATTTGAGGCTTACTAAACCCCCTCACCACCGTGGTCCAGGTTTGCAGTACAGTAGCAGCTGTACCAACCGG GTTTCAAGCAAGTTTTGCAGTCTAGCATCGCACCACTCTCGCACAGCACAATGTCGTCCACGAACGGAGCACGAAGCGGATCGCTCTACATCCTGCAAGCGTTGGTGCTGCTCTGGTCGATAGCGATGGTATCGGCCAACAAGCGATATTGTGGAGCGG A CTGGTAAAGGTACTGTCCTTCCTGTGTGATGAATTCCCCGATCTGCATACGACGAGCAAGCGGTCCGCTGACAACTTCGCCAAGCCGTCGGATATGGCCACGGAGGACTGGATGAACGTGGAAGACAACACGCAGCAGATACTCGATCAGCAGCTGCAGTCGGTCGGCATGCCGGATGATCGTG CCACGGTACCCGCCTGGATGAACATGGTCTACCCATCGAACTACATGTACCGTCATGGGGCAGGACACAACGAGCTGATACCGGCCCGCTTCCGCAAGAATCGTGGTGGCATCGTGGAGGAGTGTTGTTTGCGGCCGTGCGGTATGAACCAGTTGCTGCAGTACTGCAAGAAGGTTAGCGCGTACTAAAAGGTCAACGGGAACGAGTAGACGTCGGGCAAGTGAAGCTTATACGCTCATAAGTGTAAAAAGCATATAATACTCTACTCATATTGAATGGTTTGTGTCACACGAGAAGCAGGGAAAATAGGAGGGAACAAGTCCCTGACGTAGGTCACTGATGCAGGGAATGGTTTCGTACAAAGCCGTATTATAAAGCACAACATTGAACAAAGTTGATAAACAACT ]
[+] EMBL BX612229 [ ACCCCCTCACCACCGTGGTCCAGGTTTGCAGTACAGTAGCAGCTGTACCAACCGGAGTTTCAAGCAAGTTTTGCAGTCTAGCATCGCACCACTCTCGCACAGCACAATGTCGTCCACGAACGGAGCACGAAGCGGATCGCTCTACATCCTGCAAGCGTTGGTGCTGCTCTGGTCGATAGCGATGGTATCGGCCAACAAGCGATATTTTGGAGCGG AGCTGGTAAAGGTACTGTCCTTCCTGTGTGATGAATTCCCCGATCTGCATACGACGAGCAAGCGGTCCGCTGACAACTTCGCCAAGCCGTCGGATATGGCCACGGAGGACTGGATGAACGCGGAAGACAACACGCAGCAGATACTCGATCAGCAGCTGCAGTCGGTCGGCATGCCGGATGATCGTG CCACGGTACCCGCCTGGATGAACATGGTCTACCCATCGAACT ATGTACCGTCATGGGGCAGGACACAACGAGCTGATACCGGCCCGCTTCCGCAAGAATCGTGGTGGCATCGTGGAGGAGTGTTGTTTGCGGCCGTGCGGTATGAACCAGTTGCTGCAGTACTGCAAGAAGGTTAGCGCGTACTAAAAGGTCAACGGGAACGGGTAGACGTCGGGCAAGTGAAGCTTATACGCTCATAAGTGTGTTTGGCATATAATACTCTACTCATATTGAATGGTTTGTGTCACACGAGAAGCAAGGAAAATAGGAGGGAACAAGTCCC ]
[+] EMBL BX626105 [ CCCTCACCACCGTGGTCCAGGTTTACAGTACAGTAGGAGCTGTACCAACCGG GTTTCAAGCAAGTTTTGCAGTCTAACATCGCACTACTCTCGCACAGCACAATGTCGTCCACAAACGGAGCACGAAGCGTATCGCTCTACATCCTGCAAGCGTTGGTGCTGCTCTGGTCGATAGCGATGGTATCGGCCAACAAGCGATACTGTGGAGCGGAA CTGGTAAAGGTACTGTCCTTCCTGTGTGATGAGTTTCCCGATCTGCATACGACGAGCAAGCGATCCGCTGACAACTTCGCCAAGCCGTCGGATATGGCCACGGAGGACTGGATGAACGCGGAAGACAACACGCAGCAGATACTCGATCAGCAGCTGCAGTCGGTCGGTATGCCGGATGATCGTG CCGCGGTACCCGCCTGGATGAACATGGTCTACCCGACGAACTACATGTACCGTCATGGGGCAGGACACAACGAGCTGATACCCGCCCGCTTCCGCAAGAATCGTGGTGGCATCGTGGAGGAGTGTTGTTTGCGGCCGTGCGGTATGAACCAGTTGCTGCAGTACTGCAAGAAGGTTAGCGCGTACTAAAAGGTCAACGAAAACGGGTAGACGTCGGGCAAGTGAAGCTTATACGCTCATAAGTGTGTTTGGCATAGAATACTCTACTCATATTGAATGGTTTGTGTCGCACGAGAAGCAGGGAAAATAGGANGGAACAAGTCCCTAACGTAGGTTACTGATGTANGGAATGGTTACG ]
[+] EMBL BX609954 [ CCCGATCTGCATACGACGAGCAAGCGGTCCGCTGACAACTTCGCCAAGCCGTCGGATATGGCCACGGAGGACTGGATGAACGCGGAAGACAACACGCAGCAGATACTCGATCAGCAGCTGCAGTCGGTCGGCATGCCGGATGATCGTG CCACGGTACCCGCCTGGATGAACATGGTCTACCCATCGAACTACATGTACCGTCATGGGGCAGGACACAACGAGCTGATACCGGCCCGCTTCCGCAAGAATCGTGGTGGCATCGTGG ]
[-] EMBL CNS08WBA [ CCAAGCCGTCGGATATGGCCACGGAGGACTGGATGAACGTGGAAGACTTTTTGCAGAAGAAACTCGATCAGCAGCTGCAGTCGGTCGGCATGCCGGATGATCGTGCCCACGGTACCCGCCTGGATGAACATGGTCTACCCATCGAACTACATGTACCGTCATGGGGCAGGACACAACGAGCTGATACCGGCCCGCTTCCGCAAGAATCGTGGTGGCATCGTGGAGGAGTGTTGTTTGCGGCCGTGCGGTATGAACCAGTTGCTGCAGTACTGCAAGAAGGTTAGCGCGTACTAAAAGGTCAACGGGAACGAGTAGACGTCGGGCAAGTGAAGCTTATACGCTCATAAGTGTGTTTGGCATATAATACTCTACTCATATTGAATGGTTTTTTTCACACGAGAAGCAGGGAAAATAGGAGGGAACAAGTCCCTGACGTAGGTCACTGATGCAGGGAATGGTTTCGTACAAAGCCGTATTATAAAGCACAACATTGAACAAAGTTGATAAACCACTCACCTTAAAATACCTTTAGCTTAGGCTCACAAGCTCTTGCTGTTATTAGAAACGCTTTCTATATTTTAACGATGTTGCTAAAAACTTGTGCGGTTGCGGCAAGCAGTCCAGACCAGATGATGTAGGGAACCACGTATTTAAGTACCTTAAATGGCTGCCAAGCATAGCTACAGATATTATTGGACTATTTGGTAAAGCATGAAAAAT AAAAAAAAACTATCGATTATTGGCCATTTGCAAATAGCGCATGAAAAT]
[+] EMBL BX611912 [ CAGCAGCTGCAGTCGGTCGGCATGCCCTTTGATCGTG CCACGGTACCCGCCTGGATGAACATGGTCTACCCATCGAACTACATGTACCGTCATGGGGCAGGACACAACGAGCTGATACCGGCCCGCTTCCGCAAGAATCGTGGTGGCATCGTGGAGGAGTGTTGTTTGCGGCCGTGCGGTATGAACCAGCTGCTGCAGTACTGCAAGAAGGTTAGCGCGTACTAAAAGGTCAACGGGAACGGGTAGACGTCGGGCAAGTGAAGCTTATACGCTCATAAGTGTGTTTGGCATATAATACTCTACTCATATTGAATGGTTTGTGTCACACGAGAAGCAGGG AAATAGGAGGGAACAAGTCCCTGACGTAGGTCACTGATGCAGGGAATGGTTTCGTACAAAGCCGTATTATAAAGCACAACATTGAACAAAGTTGATAAACAACTCACCTTAAAATACCTTTAGCTTAGGCTCACAAGCTCTTGCTGTTATTAGAAACGCTTTCTATATTTTAACGATGTTGCTAAACACTTGTGCGGTTGCGGCAAGCAGTCCAGACCAGATGATGTAGGGAACCACGTATTTAAGTACCTTAAATGGCTGCCAAGCATAGCTACAGATATTATTGGACTATTTGGTAAAGCATGAAAAATAAAAAAAAAACTATCGATTATTGGCCATTTGCAAATA ]
[-] EMBL CNS08S63 [ TGGTTTCGTACAAAGCCGTATTATAAAGGACAACATTGAACAAAGTTGATAAACAACTCACCTTAAAATACCTTTAGCTTAAGCTCACAAGCTCTTGCTGTTATTAGAAACGCTTTCTATATTTTAACGATGTTGCTAAAAACTTGTGCGGTTGCGGCAAGCAGTCCAGACCAGATGATGTAGGGAACCACGTATTTAAGTACCTTAAATGGCTGCCAAGCATAGCTACAGATATTATTGGACTATTTGGTAAAGCATGAAAAAT AAAAAAAAACTATCGATTATTGGCCA ]
consensusID : consensus_8427#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 711 fasta sequence
[GACCCACGCGTCCGGTGTAGTTTACTAGCTTTTCACTCCGTGGAGTAGTGTTTGAGGCTTACTAAACCCTCTCACCACCGTGGTCCAGGTTTGCAGTACAGTAGCAGCTGTACCAACCGGGTTTCAAGCAAGTTTTGCAGTCTAGCATCGCACCACTCTCGCACAGCACAATGTCGTCCACGAACG-GAGCACGAAGCGGATC-GCTCTACATCCTGCAAGCGTTGGTGCTGCTCTGGTCGATAGCGATGGTATCGGCCAA-CAAGCGATATTGT-GGA-GCGGA-GCTGGTAAAGGTACTGTCCTT-CCTGTGTGATGAATTCCCCGATCTGCATACGACGAGCAAGCGGTCCGCTGACAACTTCGCCAA-GCCGTC-GG-ATATGGCCACGGAGGACTGGATGAACGCGGAA-GACAAC-ACGCA-GCAGATACTCGATCAGCA-GCTGCA--GTC-GGTC-GGCATGCCGGATGATCGTGCCACGGTACCCGCCTGGATGAACAT-GGTC-T-ACCC-ATC-GAACTAC-A-TGTACCGT-CATGGGGC-AG-GACAACGAGCTGATACCGGCCCGCTTCCGCAAGAATCGTGGTGGCATCGTGGAGGAGTGTTGTTTGCGGCCGTGCGGTATGAACCAGTTGCTGCAGTACTGCAAGAAGGTTAGCGCGTACTAAAAGGTCAACGGGAACGGGTAGACGTCGGGCAAGTGAAGCTTATACGCTCATAAGTGTGTT]
[+] EMBL BM647099 [GACCCACGCGTCCGGTGTAGTTTACTAGCTTTTCACTCCGTGGAGTAGTGTTTGAGGCTTACTAAACCCTCTCACCACCGTGGTCCAGGTTTGCAGTACAGTAGCAGCTGTACCAACCGGGTTTCAAGCAAGTTTTGCAGTCTAGCATCGCACCACTCTCGCACAGCACAATGTCGTCCACGAACG GAGCACGAAGCGGATC GCTCTACATCCTGCAAGCGTTGGTGCTGCTCTGGTCGATAGCGATGGTATCGGCCAA CAAGCGATATTGT GGA GCGGA GCTGGTAAAGGTACTGTCCTT CCTGTGTGATGAATTCCCCGATCTGCATACGACGAGCAAGCGGTCCGCTGACAACTTCGCCAA GCCGTC GG ATATGGCCACGGAGGACTGGATGAACGCGGAA GACAAC ACGCA GCAGATACTCGATCAGCA GCTGCA GTC GGTC GGCATGCCGGATGATCGTGCCACGGTACCCGCCTGGATGAACAT GGTC T ACCC ATC GAACTAC A TGTACCGT CATGGGGC AG GACAACGAGCTGATACCGGCCCGCTTCCGCAAGAATCGTGGTGGCATCGTGGAGGAGTGTTGTTTGCGGCCGTGCGGTATGAACCAGTTGCTGCAGTACTGCAAGAAGGTTAGCGCGTACTAAAAGGTCAACGGGAACGGGTAGACGTCGGGCAAGTGAAGCTTATACGCTCATAAGTGTGTT]
[+] EMBL AL695108 [ ccnaggttaTGTAGTTTACTAGCTTTTCACTCCGTGGAGTAGTGTTTGAGGCTTACTAAACCCTCTCACCACCGTGGTCCAGGTTTGCAGTACAGTAGCAGCTGTACCAACCGGGTTTCAAGCAAGTTTTGCAGTCTAGCATCGCACCACTCTCGCACAG ACAATGTCGTCCACGAACGNGAGCACGAAGCGGATCTGCTCTACATCCTGCAAGCGTTGGTGCTGCTCTGGTCGATAGCGATGGTATCGGCCAANCAAGCGATATTGTAGGACGCGGACGCTGGTAAAGGTACTGTCCTTACCTGTGTGATGAATTCCCCGATCTGCATACGACGAGCAAGCGGTCCGCTGACAACTTCGCCAAGGCCGTCAGGAATATGGNCACGGAGGACTGGATGAACGCGGAAGGACAACGACGCAGGCAGATACTCGATCAGNAGGCTGCAAGGTCGGGTCGGGCATGCCGGATGATCGTGCCAAGGTAACCGTCTGGATGAACATAGGTCATAACCCAATCGGAACTACGATTGTACCGTNCATGGGGCGAGTGACAcaacngag ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8427#0 TAACGGATTTCCAGCGGTGTAGTTTACTAGCTTTTCACTCCGTGGAGTAGTATTTGAGGC 60
consensus_8427#1 -GACCCACGCGTC-CGGTGTAGTTTACTAGCTTTTCACTCCGTGGAGTAGTGTTTGAGGC 58
** * ************************************* ********
consensus_8427#0 TTACTAAACCCCCTCACCACCGTGGTCCAGGTTTGCAGTACAGTAGCAGCTGTACCAACC 120
consensus_8427#1 TTACTAAACCCTCTCACCACCGTGGTCCAGGTTTGCAGTACAGTAGCAGCTGTACCAACC 118
*********** ************************************************
consensus_8427#0 GGGTTTCAAGCAAGTTTTGCAGTCTAGCATCGCACCACTCTCGCACAGCACAATGTCGTC 180
consensus_8427#1 GGGTTTCAAGCAAGTTTTGCAGTCTAGCATCGCACCACTCTCGCACAGCACAATGTCGTC 178
************************************************************
consensus_8427#0 CACGAACGGAGCACGAAGCGGATCGCTCTACATCCTGCAAGCGTTGGTGCTGCTCTGGTC 240
consensus_8427#1 CACGAACGGAGCACGAAGCGGATCGCTCTACATCCTGCAAGCGTTGGTGCTGCTCTGGTC 238
************************************************************
consensus_8427#0 GATAGCGATGGTATCGGCCAACAAGCGATATTGTGGAGCGGA-CTGGTAAAGGTACTGTC 299
consensus_8427#1 GATAGCGATGGTATCGGCCAACAAGCGATATTGTGGAGCGGAGCTGGTAAAGGTACTGTC 298
****************************************** *****************
consensus_8427#0 CTTCCTGTGTGATGAATTCCCCGATCTGCATACGACGAGCAAGCGGTCCGCTGACAACTT 359
consensus_8427#1 CTTCCTGTGTGATGAATTCCCCGATCTGCATACGACGAGCAAGCGGTCCGCTGACAACTT 358
************************************************************
consensus_8427#0 CGCCAAGCCGTCGGATATGGCCACGGAGGACTGGATGAACGTGGAAGACAACACGCAGCA 419
consensus_8427#1 CGCCAAGCCGTCGGATATGGCCACGGAGGACTGGATGAACGCGGAAGACAACACGCAGCA 418
***************************************** ******************
consensus_8427#0 GATACTCGATCAGCAGCTGCAGTCGGTCGGCATGCCGGATGATCGTGCCACGGTACCCGC 479
consensus_8427#1 GATACTCGATCAGCAGCTGCAGTCGGTCGGCATGCCGGATGATCGTGCCACGGTACCCGC 478
************************************************************
consensus_8427#0 CTGGATGAACATGGTCTACCCATCGAACTACATGTACCGTCATGGGGCAGGACACAACGA 539
consensus_8427#1 CTGGATGAACATGGTCTACCCATCGAACTACATGTACCGTCATGGGGCAGGAC--AACGA 536
***************************************************** *****
consensus_8427#0 GCTGATACCGGCCCGCTTCCGCAAGAATCGTGGTGGCATCGTGGAGGAGTGTTGTTTGCG 599
consensus_8427#1 GCTGATACCGGCCCGCTTCCGCAAGAATCGTGGTGGCATCGTGGAGGAGTGTTGTTTGCG 596
************************************************************
consensus_8427#0 GCCGTGCGGTATGAACCAGTTGCTGCAGTACTGCAAGAAGGTTAGCGCGTACTAAAAGGT 659
consensus_8427#1 GCCGTGCGGTATGAACCAGTTGCTGCAGTACTGCAAGAAGGTTAGCGCGTACTAAAAGGT 656
************************************************************
consensus_8427#0 CAACGGGAACGAGTAGACGTCGGGCAAGTGAAGCTTATACGCTCATAAGTGTGTTTGGCA 719
consensus_8427#1 CAACGGGAACGGGTAGACGTCGGGCAAGTGAAGCTTATACGCTCATAAGTGTGTT----- 711
*********** *******************************************
consensus_8427#0 TATAATACTCTACTCATATTGAATGGTTTGTGTCACACGAGAAGCAGGGAAAATAGGAGG 779
consensus_8427#1 ------------------------------------------------------------
consensus_8427#0 GAACAAGTCCCTGACGTAGGTCACTGATGCAGGGAATGGTTTCGTACAAAGCCGTATTAT 839
consensus_8427#1 ------------------------------------------------------------
consensus_8427#0 AAAGCACAACATTGAACAAAGTTGATAAACAACTCACCTTAAAATACCTTTAGCTTAGGC 899
consensus_8427#1 ------------------------------------------------------------
consensus_8427#0 TCACAAGCTCTTGCTGTTATTAGAAACGCTTTCTATATTTTAACGATGTTGCTAAAAACT 959
consensus_8427#1 ------------------------------------------------------------
consensus_8427#0 TGTGCGGTTGCGGCAAGCAGTCCAGACCAGATGATGTAGGGAACCACGTATTTAAGTACC 1019
consensus_8427#1 ------------------------------------------------------------
consensus_8427#0 TTAAATGGCTGCCAAGCATAGCTACAGATATTATTGGACTATTTGGTAAAGCATGAAAAA 1079
consensus_8427#1 ------------------------------------------------------------
consensus_8427#0 TAAAAAAAAACTATCGATTATTGGCCATTTGCAAATAGCGCATGAAAAT 1128
consensus_8427#1 -------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||