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Anopheles gambiae
cluster # 8430 cluster # 8430       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8430#0 length = 795 sequences # 1  
consensus_8430#1 length = 774 sequences # 2  
consensus_8430#2 length = 585 sequences # 4  
consensus_8430#3 length = 561 sequences # 3  

consensusID : consensus_8430#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 795
fasta sequence
                              [CGCCGAGGAATNAGAGTCTCTTACTGCAAATAACCAATTATCCTTCAAAATGGCATTCAAATACTGCATCCTGTTCGCTGTTGTTGCCGCTGCCAGCGCTGCCGTACTTCCGGTGGCCGTGAAGCATATCGAATATGCGGATGCTCCGGCCGAGTACCAGTTCGAGTACTCCGTGCATGATGATCATACCGGAGACATCAAGAGCCAGCACGAGGAGCGTCACGGTGACAACGTCGTCGGACAGTACACTCTGATTGATGCTGATGGCTACCGCCGAGTGGTCGAATACACCGCCGATGAGCACAACGGATTCAACGCTGTCGTTCGCCGTGAGCCTGTGAAGACTGCTATCCCAGTCGCCAAGGTCGTTGCCCCCATTGCCAAGGTTTACGCTGCTCCTATCGCCAAGGTCGCTGTCCCGGTTGCCAAGGTTGCTACCCTGCTTTATCACTACTAGGATGTTATACCAAATTTGTTGCCTAAGTAGTAAAAATTGTGTAAAACTANAATTTACTGAANCTCGTCAAATGACAAATAACANAGAGTCACANCAATCAACGNAAACACGGCATGGTTTGACGNNCCCGCAAAGCCTCTATGCCCCTTAACTGAGGGGTTAAATNNTAAGCATTTGGGGACACTTGGCCGGTCAGTTNTAACAACAGGTCNGATTGGACTGGGGGAAAAACCCTTGNCGGTAACCCAAGTGAAACCGCCTTGCAGAAAATCCCCCCNTTTAGTCCAAGCGGGCGATAATCAGCNGAGAAGGCCCGACCCGTATCGCCTTTCCCAACA]

[+] EMBL AL933148             [CGCCGAGGAATNAGAGTCTCTTACTGCAAATAACCAATTATCCTTCAAAATGGCATTCAAATACTGCATCCTGTTCGCTGTTGTTGCCGCTGCCAGCGCTGCCGTACTTCCGGTGGCCGTGAAGCATATCGAATATGCGGATGCTCCGGCCGAGTACCAGTTCGAGTACTCCGTGCATGATGATCATACCGGAGACATCAAGAGCCAGCACGAGGAGCGTCACGGTGACAACGTCGTCGGACAGTACACTCTGATTGATGCTGATGGCTACCGCCGAGTGGTCGAATACACCGCCGATGAGCACAACGGATTCAACGCTGTCGTTCGCCGTGAGCCTGTGAAGACTGCTATCCCAGTCGCCAAGGTCGTTGCCCCCATTGCCAAGGTTTACGCTGCTCCTATCGCCAAGGTCGCTGTCCCGGTTGCCAAGGTTGCTACCCTGCTTTATCACTACTAGGATGTTATACCAAATTTGTTGCCTAAGTAGTAAAAATTGTGTAAAACTANAATTTACTGAANCTCGTCAAATGACAAATAACANAGAGTCACANCAATCAACGNAAACACGGCATGGTTTGACGNNCCCGCAAAGCCTCTATGCCCCTTAACTGAGGGGTTAAATNNTAAGCATTTGGGGACACTTGGCCGGTCAGTTNTAACAACAGGTCNGATTGGACTGGGGGAAAAACCCTTGNCGGTAACCCAAGTGAAACCGCCTTGCAGAAAATCCCCCCNTTTAGTCCAAGCGGGCGATAATCAGCNGAGAAGGCCCGACCCGTATCGCCTTTCCCAACA]


>consensus_8430#0 CGCCGAGGAATNAGAGTCTCTTACTGCAAATAACCAATTATCCTTCAAAATGGCATTCAA ATACTGCATCCTGTTCGCTGTTGTTGCCGCTGCCAGCGCTGCCGTACTTCCGGTGGCCGT GAAGCATATCGAATATGCGGATGCTCCGGCCGAGTACCAGTTCGAGTACTCCGTGCATGA TGATCATACCGGAGACATCAAGAGCCAGCACGAGGAGCGTCACGGTGACAACGTCGTCGG ACAGTACACTCTGATTGATGCTGATGGCTACCGCCGAGTGGTCGAATACACCGCCGATGA GCACAACGGATTCAACGCTGTCGTTCGCCGTGAGCCTGTGAAGACTGCTATCCCAGTCGC CAAGGTCGTTGCCCCCATTGCCAAGGTTTACGCTGCTCCTATCGCCAAGGTCGCTGTCCC GGTTGCCAAGGTTGCTACCCTGCTTTATCACTACTAGGATGTTATACCAAATTTGTTGCC TAAGTAGTAAAAATTGTGTAAAACTANAATTTACTGAANCTCGTCAAATGACAAATAACA NAGAGTCACANCAATCAACGNAAACACGGCATGGTTTGACGNNCCCGCAAAGCCTCTATG CCCCTTAACTGAGGGGTTAAATNNTAAGCATTTGGGGACACTTGGCCGGTCAGTTNTAAC AACAGGTCNGATTGGACTGGGGGAAAAACCCTTGNCGGTAACCCAAGTGAAACCGCCTTG CAGAAAATCCCCCCNTTTAGTCCAAGCGGGCGATAATCAGCNGAGAAGGCCCGACCCGTA TCGCCTTTCCCAACA



consensusID : consensus_8430#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 774
fasta sequence
                              [GATCNCCCGAGGTTGACGAGGGCAGCAGTTATTGCATGGCGTCAAACTTTGCGTTATTTTGGCCATCATGGGTGTTGCCAACGCGGTTCTACTGCCAACGCTGGTTAAGAAAGTGGAAGTGGAAGCACCGGCCGAGTACCAGTTCTCGTACTCCGTACACGACGATCACACCGGAGACATCAAGAGCCAGCAGGAGGAACGTCACGGTGATGACGTCAAGGGACAGTACACTCTGATCGATGCCGATGGCCACCGTCGTGTGGTTGACTACACCGCCGATGAGCACAACGGATTCAACGCCGTCGTCCGCCGTGAGCCCCTGGAGGGACACAAGCTGGTAAAGACCGTCGTCCCAGTGCACAAAGTTGCTGTACCAGTGGGCACAACTAATGGTTGCCCCTGGCTCTGAAGGTTGCGGTTCCTGTTGCCAAATATGCTGTCCCGGTTGCCAAGGTTCTGGCTCCGGCTCATGTAGCTACTGTGAGCTTCTCTGCACCAAGTCTTACCTACCACTACTAAGAACGTTTGACGCGATGTATATGAAATAGTGTCAGTACTTTGCAATAAATGTAGTAAAATTCGTTTCTATTTTCAAAAAAGTGTTTAAAAAGTGAGTGTATAATCATAATTTGAGTATAAATCTCAGAAGTATAACAAATGTCTCATGAAAAGCTACACATAGTATTCCGTAATTACGATTACTTTACTTGCCCCAACTGTACGATATCATAAGCATAACAGTGACTGCTACNAATTAAAGTAGATGCAATGTAA]

[+] EMBL AL931707             [GATCNCCCGAGGTTGACGAGGGCAGCAGTTATTGCATGGCGTCAAACTTTGCGTTATTTTGGCCATCATGGGTGTTGCCAACGCGGTTCTACTGCCAACGCTGGTTAAGAAAGTGGAAGTGGAAGCACCGGCCGAGTACCAGTTCTCGTACTCCGTACACGACGATCACACCGGAGACATCAAGAGCCAGCAGGAGGAACGTCACGGTGATGACGTCAAGGGACAGTACACTCTGATCGATGCCGATGGCCACCGTCGTGTGGTTGACTACACCGCCGATGAGCACAACGGATTCAACGCCGTCGTCCGCCGTGAGCCCCTGGAGGGACACAAGCTGGTAAAGACCGTCGTCCCAGTGCACAAAGTTGCTGTACCAGTGGGCACAACTAATGGTTGCCCCTGGCTCTGAAGGTTGCGGTT                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX625583             [                                                               CATCATGGGTGTTGCCAACGCGGTTCTACTGCCAACGCTGGTTAAGAAAGTGGAAGTGGAAGCACCGGCCGAGTACCAGTTCTCGTACTCCGTACACGACGATCACACCGGAGACATCAAGAGCCAGCAGGAGGAACGTCACGGTGATGACGTCAAGGGACAGTACACTCTGATCGATGCCGATGGCCACCGTCGTGTGGTTGACTACACCGCCGATGAGCACAACGGATTCAACGCCGTCGTCCGCCGTGAGCCCCTGGAGGGACACAAGCTGGTAAAGACCGTCGTCCCAGTGCACAAAGTTGCTGTACCAGT GGCAC ACT AT GTTGCCCCT GCTCTGAAGGTTGCGGTTCCTGTTGCCAAATATGCTGTCCCGGTTGCCAAGGTTCTGGCTCCGGCTCATGTAGCTACTGTGAGCTTCTCTGCACCAAGTCTTACCTACCACTACTAAGAACGTTTGACGCGATGTATATGAAATAGTGTCAGTACTTTGCAATAAATGTAGTAAAATTCGTTTCTATTTTCAAAAAAGTGTTTAAAAAGTGAGTGTATAATCATAATTTGAGTATAAATCTCAGAAGTATAACAAATGTCTCATGAAAAGCTACACATAGTATTCCGTAATTACGATTACTTTACTTGCCCCAACTGTACGATATCATAAGCATAACAGTGACTGCTACNAATTAAAGTAGATGCAATGTAA]


>consensus_8430#1 GATCNCCCGAGGTTGACGAGGGCAGCAGTTATTGCATGGCGTCAAACTTTGCGTTATTTT GGCCATCATGGGTGTTGCCAACGCGGTTCTACTGCCAACGCTGGTTAAGAAAGTGGAAGT GGAAGCACCGGCCGAGTACCAGTTCTCGTACTCCGTACACGACGATCACACCGGAGACAT CAAGAGCCAGCAGGAGGAACGTCACGGTGATGACGTCAAGGGACAGTACACTCTGATCGA TGCCGATGGCCACCGTCGTGTGGTTGACTACACCGCCGATGAGCACAACGGATTCAACGC CGTCGTCCGCCGTGAGCCCCTGGAGGGACACAAGCTGGTAAAGACCGTCGTCCCAGTGCA CAAAGTTGCTGTACCAGTGGGCACAACTAATGGTTGCCCCTGGCTCTGAAGGTTGCGGTT CCTGTTGCCAAATATGCTGTCCCGGTTGCCAAGGTTCTGGCTCCGGCTCATGTAGCTACT GTGAGCTTCTCTGCACCAAGTCTTACCTACCACTACTAAGAACGTTTGACGCGATGTATA TGAAATAGTGTCAGTACTTTGCAATAAATGTAGTAAAATTCGTTTCTATTTTCAAAAAAG TGTTTAAAAAGTGAGTGTATAATCATAATTTGAGTATAAATCTCAGAAGTATAACAAATG TCTCATGAAAAGCTACACATAGTATTCCGTAATTACGATTACTTTACTTGCCCCAACTGT ACGATATCATAAGCATAACAGTGACTGCTACNAATTAAAGTAGATGCAATGTAA



consensusID : consensus_8430#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 585
fasta sequence
                              [CCGGTTCCCCTACAGCAGTTATTGCAATGGCGTTCAAACTTTGCGTTATTTTGGCCATCATGGGTGTTGCCAACGCGGTTCTACTGCCAACGCTGGTTAAGAAAGTGGAAGTGGAAGCACCGGCCGAGTACCAGTTCTCGTACTCCG-TACACGACGATCACACCGGAGACATCAAGAGCCAGCAGGAGGAACGTCACGGTGATGACGTCAAGGGACAGTACACTCTGATCGATGCCGATGGCCACCGTCGTGTGGTTGACTACACCGCCGATGAGCACAACGGATTCAACGCCGTCGTCCGCCGTGAGCCCCTGGAGGGACACAAGCTGGTAAAGACCGTCGTCCCAGTGCACAAAGTTGCTGTACCAGTGGCACACTATGTTGCCCCTGCTCTGAAGGTTGCGGTTCCTGTTGCCAAATATGCTGTCCCGGTTGCCAAGGTTCTGGCTCCGGCTCATGTAGCTACTGTGAGCTTCTCTGCACCAAGTCTTACCTACCACTACTAAGAACGTTTGACGCGATGTATATGAAATAGTGTCAGTACTTTGCAATAAATGTAGTAAAATTCGTTTCTATTTTCAAAAA]

[+] EMBL BM629867             [CCGGTTCCCCTACAGCAGTTATTGCAATGGCGTTCAAACTTTGCTTTATTTTGGCCATCATGGGTGTTGCCAACGCGGTTCTACTGCCAACGCTGGTTAAGAAAGTGGAAGTGGAAGCACCGGCCGAGTACCAGTTCTCGTACTCCG TACACGACGATCACACCGGAGACATCAAGAGCCAGCAGGAGGAACGTCACGGTGATGACGTCAAGGGACAGTACACTCTGATCGATGCCGATGGCCACCGTCGTGTGGTTGACTACACCGCCGATGAGCACAACGGATTCAACGCCGTCGTCCGCCGTGAGCCCCTGGAGGGACACAAGCTGGTAAAGACCGTCGTCCCAGTGCACAAAGTTGCTGTACCAGTGGCACACTATGTTGCCCCTGCTCTGAAGGTTGCGGTTCCTGTTGCCAAATATGCTGTCCCGGTTGCCAAGGTTCTGGCTCCGGCTCATGTAGCTACTGTGAGCTTCTCTGCACCAAGTCTTACCTACCACTACTAAGAACGTTTGACGCGATGTATATGAAATAGTGTCAGTACTTTGCAATAAATGTAGTAAAATTCGTTTCTATTTTC     ]
[+] EMBL BX627296             [       CCCTACAGCAGTTATTGCAATGGCGTTCAAACTTTGCGTTATTTTGGCCATCATGGGTGTTGCCAACGCGGTTCTACTGCCAACGCTGGTTAAGAAAGTGGAAGTGGAAGCACCGGCCGAGTACCAGTTCTCGTACTCCG TACACGACGATCACACCGGAGACATCAAGAGCCAGCAGGAGGAACGTCACGGTGATGACGTCAAGGGACAGTACACTCTGATCGATGCCGATGGCCACCGTCGTGTGGTTGACTACACCGCCGATGAGCACAACGGATTCAACGCCGTCGTCCGCCGTGAGCCCCTGGAGGGACACAAGCTGGTAAAGACCGTCGTCCCAGTGCACAAAGTTGCTGTACCAGTGGCACACTATGTTGCCCCTGCTCTGAAGGTTGCGGTTCCTGTTGCCAAATATGCTGTCCCGGTTGCCAAGGTTCTGGCTCCGGCTCATGTAGCTACTGTGAGCTTCTCTGCACCAAGTCTTACCTACCACTACTAAGAACGTTTGACGCGATGTATATGAAATAGTGTCAGTACTTTGCAATAAATGTAGTAAAATTCGTTTCTATTTTCAAAAA]
[+] EMBL BX623473             [            CAGCAGTTATTGCAATGGCGTTCAAACTTTGCGTTATTTTGGCCATCATGGGTGTTGCCAACGCGGTTCTACTGCCAACGCTGGTTAAGAAAGTGGAAGTGGAAGCACCGGCCGAGTACCAGTTCTCGTACTCCGTTACACGACGATCACACCGGAGACATCAAGAGCCAGCAGGAGGAACGTCACGGTGATGACGTCAAGGGACAGTACACTCTGATCGATGCCGATGGCCACCGTCGTGTGGTTGACTACACCGCCGATGAGCACAACGGATTCAACGCCGTCGTCCGCCGTGAGCCCCTGGAGGGACACAAGCTGGTAAAGACCGTCGTCCCAGTGCACAAAGTTGCTGTACCAGTGGCACACTATGTTGCCCCTGCTCTGAAGGTTGCGGTTCCTGTTGCCAAATATGCTGTCCCGGTTGCCAAGGTTCTGGCTCCGGCTCATGTAGCTACTGTGAGCTTCTCTGCACCAAGTCTTACCTACCACTACTAAGAACGTTTGACGCGATGTATATGAAATAGTGTCAGTACTTTGCAATAAATGTAGTAAAATTCGT               ]
[+] EMBL BX620863             [                                                                                            CTGGTTAAGAAAGTGGAAGTGGAAGCACCGGGCGAGTACCAGTTCTCGTACTCCG TACACGACGATCACACCGGAGACATCAAGAGCCAGCAGGAGGAACGTCACGGNGATGACGTCAAGGGACAGNACACT                                                                                                                                                                                                                                                                                                                                                                         ]


>consensus_8430#2 CCGGTTCCCCTACAGCAGTTATTGCAATGGCGTTCAAACTTTGCGTTATTTTGGCCATCA TGGGTGTTGCCAACGCGGTTCTACTGCCAACGCTGGTTAAGAAAGTGGAAGTGGAAGCAC CGGCCGAGTACCAGTTCTCGTACTCCGTACACGACGATCACACCGGAGACATCAAGAGCC AGCAGGAGGAACGTCACGGTGATGACGTCAAGGGACAGTACACTCTGATCGATGCCGATG GCCACCGTCGTGTGGTTGACTACACCGCCGATGAGCACAACGGATTCAACGCCGTCGTCC GCCGTGAGCCCCTGGAGGGACACAAGCTGGTAAAGACCGTCGTCCCAGTGCACAAAGTTG CTGTACCAGTGGCACACTATGTTGCCCCTGCTCTGAAGGTTGCGGTTCCTGTTGCCAAAT ATGCTGTCCCGGTTGCCAAGGTTCTGGCTCCGGCTCATGTAGCTACTGTGAGCTTCTCTG CACCAAGTCTTACCTACCACTACTAAGAACGTTTGACGCGATGTATATGAAATAGTGTCA GTACTTTGCAATAAATGTAGTAAAATTCGTTTCTATTTTCAAAAA



consensusID : consensus_8430#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 561
fasta sequence
                              [CAAGAATCGGCACGAGGTTTCCAGCAGCTCACTGTAAACATCAAAAAACAAATTAAAAAATGGCATTCAAATACTGCATCCTGTTCGCTGTTGTTGCCGCTGCCAGCGCTGCCGTACTTCCGGTGGCCGTGAAGCATATCGAATATGCGGATGCTCCGGCCGAGTACCAGTTCGAGTACTCCGTGCATGATGATCATACCGGAGACATCAAGAGCCAGCACGAGGAGCGTCACGGTGACAACGTCGTCGGACAGTACACTCTGATTGATGCTGATGGTTACCGCCGAGTGGTCGAATACACCGCCGATGAGCACAACGGATTCAACGCTGTCGTTCGCCGTGAGCCTGTGAAGACTGCTATCCCAGTCGCCAAGGTCGTTGCCCCCATTGCCAAGGTTTACGCTGCTCCTATCGCCAAGGTCGCTGTCCCGGTTGCCAAGGTTGCCTACCCAGCGTACCACTACTAAGTTGGTTGAAAAATGTGTTGATAATAAGTTGGCTAGTTCAATAAATAAAATCCTGTTGTAAATAACATCGACANAAAAAAAAAGAAAACAGGCA]

[+] EMBL BX467796             [CAAGAATCGGCACGAGGTTTCCAGCAGCTCACTGTAAACATCAAAAAACAAATTAAAAAATGGCATTCAAATACTGCATCCTGTTCGCTGTTGTTGCCGCTGCCAGCGCTGCCGTACTTCCGGTGGCCGTGAAGCATATCGAATATGCGGATGCTCCGGCCGAGTACCAGTTCGAGTACTCCGTGCATGATGATCATACCGGAGACATCAAGAGCCAGCACGAGGAGCGTCACGGTGACAACGTCGTCGGACAGTACACTCTGATTGATGCTGATGGTTACCGCCGAGTGGTCGAATACACCGCCGATGAGCACAACGGATTCAACGCTGTCGTTCGCCGTGAGCCTGTGAAGACTGCTATCCCAGTCGCCAAGGTCGTTGCCCCCATTGCCAAGGTTTACGCTGCTCCTATCGCCAAGGTCGCTGTCCCGGTTGCCAAGGTTGCCTACCCAGCGTACCACTACTAAGTTGGTTGAAAAATGTGTTGATAATAAGTTGGCTAGTTCAATAAATAAAATCCTGTTGTAAATAAAAAAAAAANAAAAAAAAAGAAAACAGGCA]
[+] EMBL BX622151             [               gcTTTCCAGCAGCTCACTGTAAA ATCAAAAAACAAATTAAAAAATGGCATTCAAATACTGCATCCTGTTCGCTGTTGTTGCCGCTGCCAGCGCTGCCGTACTTCCGGTGGCCGTGAAGCATATCGAATATGCGGATGCTCCGGCCGAGTACCAGTTCGAGTACTCCGTGCATGATGATCATACCGGAGACATCAAGAGCCAGCACGAGGAGCGTCACGGTGACAACGTCGTCGGACAGTACACTCTGATTGATGCTGATGGTTACCGCCGAGTGGTCGAATACACCGCCGATGAGCACAACGGATTCAACGCTGTCGTTCGCCGTGAGCCTGTGAAGACTGCTATCCCAGTCGCCAAGGTCGTTGCCCCCATTGCCAAGGTTTACGCTGCTCCTATCGCCAAGGTCGCTGTCCCGGTTGCCAAGGTTGCCTACCCAGCGTACCACTACTAAGTTGGTTGAAAAATGTGTTGATAATAAGTTGGCTAGTTCAATAAATAAAATCCTGTTGTAAATAACATCGAC                      ]
[+] EMBL BX627978             [                                                                    AAATACTGCATCCTGTTCGCTGTTGTTGCCGCTGCCAGCGCTGCCGTACTTCCGGTGGCCGTGAAGCATATCGAATATGCGGATGCTCCGGCCGAGTACCAGTTCGAGTACTCCGTGCATGATGATCATACCGGAGACATCAAGAGCCAGCACGAGGAGCGTCACGGTGACAACGTCGTCGGACAGTACACTCTGATTGATGCTGATGGTTACCGCCGAGTGGTCGAATACACCGCCGATGAGCACAACGGATTCAACGCTGTCGTTCGCCGTGAGCCTGTGAAGACTGCTATCCCAGTCGCCAAGGTCGTTGCCCCCATTGCCAAGGTTTACGCTGCTCCTATCGCCAAGGTCGCTGTCCCGGTTGCCAAGGTTGCCTACCCAGCGTACCACTACTAAGTTGGTTGAAAAATGTGTTGATAATAAGTTGGCTAGTTCAATAAATAAAATCCTGTTGTAAATAACATCGAC                      ]


>consensus_8430#3 CAAGAATCGGCACGAGGTTTCCAGCAGCTCACTGTAAACATCAAAAAACAAATTAAAAAA TGGCATTCAAATACTGCATCCTGTTCGCTGTTGTTGCCGCTGCCAGCGCTGCCGTACTTC CGGTGGCCGTGAAGCATATCGAATATGCGGATGCTCCGGCCGAGTACCAGTTCGAGTACT CCGTGCATGATGATCATACCGGAGACATCAAGAGCCAGCACGAGGAGCGTCACGGTGACA ACGTCGTCGGACAGTACACTCTGATTGATGCTGATGGTTACCGCCGAGTGGTCGAATACA CCGCCGATGAGCACAACGGATTCAACGCTGTCGTTCGCCGTGAGCCTGTGAAGACTGCTA TCCCAGTCGCCAAGGTCGTTGCCCCCATTGCCAAGGTTTACGCTGCTCCTATCGCCAAGG TCGCTGTCCCGGTTGCCAAGGTTGCCTACCCAGCGTACCACTACTAAGTTGGTTGAAAAA TGTGTTGATAATAAGTTGGCTAGTTCAATAAATAAAATCCTGTTGTAAATAACATCGACA NAAAAAAAAAGAAAACAGGCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8430#0      --------CGCCGAGGAATNAGAGTCTCTTACTGCAAATAACCAATTATCCTTCAAAA-- 50
consensus_8430#3      CAAGAATCGGCACGAGGTTTCCAGCAGCTCACTGTAAACATCAAAAAACAAATTAAAAAA 60
consensus_8430#1      ---------------------GATCNCCCGAGGTTGACGAGGGCAGCAGTTATTGCA--- 36
consensus_8430#2      ----------------------------CCGGTTCCCCTA---CAGCAGTTATTGCAA-- 27
                                                             *    *  *    *   *   

consensus_8430#0      TGGCATTCAAATACTGCATCCTGTTCGCTGTTGTTGCCGCTGCCAGCGCTGCCGTACTTC 110
consensus_8430#3      TGGCATTCAAATACTGCATCCTGTTCGCTGTTGTTGCCGCTGCCAGCGCTGCCGTACTTC 120
consensus_8430#1      TGGCGT-CAAACTTTGCGTTATTTTGGCCATCATGGGTGTTGCCAACGCGGTTCTACTGC 95
consensus_8430#2      TGGCGTTCAAACTTTGCGTTATTTTGGCCATCATGGGTGTTGCCAACGCGGTTCTACTGC 87
                      **** * ****   *** *  * ** **  *  * *  * ***** *** *   **** *

consensus_8430#0      CGGTGGCCGTGAAGCATATCGAATATGCGGATGCTCCGGCCGAGTACCAGTTCGAGTACT 170
consensus_8430#3      CGGTGGCCGTGAAGCATATCGAATATGCGGATGCTCCGGCCGAGTACCAGTTCGAGTACT 180
consensus_8430#1      CAACGCTGGTTAAGAAAGTGGAA---GTGGAAGCACCGGCCGAGTACCAGTTCTCGTACT 152
consensus_8430#2      CAACGCTGGTTAAGAAAGTGGAA---GTGGAAGCACCGGCCGAGTACCAGTTCTCGTACT 144
                      *   *   ** *** *  * ***   * *** ** ******************  *****

consensus_8430#0      CCGTGCATGATGATCATACCGGAGACATCAAGAGCCAGCACGAGGAGCGTCACGGTGACA 230
consensus_8430#3      CCGTGCATGATGATCATACCGGAGACATCAAGAGCCAGCACGAGGAGCGTCACGGTGACA 240
consensus_8430#1      CCGTACACGACGATCACACCGGAGACATCAAGAGCCAGCAGGAGGAACGTCACGGTGATG 212
consensus_8430#2      CCGTACACGACGATCACACCGGAGACATCAAGAGCCAGCAGGAGGAACGTCACGGTGATG 204
                      **** ** ** ***** *********************** ***** ***********  

consensus_8430#0      ACGTCGTCGGACAGTACACTCTGATTGATGCTGATGGCTACCGCCGAGTGGTCGAATACA 290
consensus_8430#3      ACGTCGTCGGACAGTACACTCTGATTGATGCTGATGGTTACCGCCGAGTGGTCGAATACA 300
consensus_8430#1      ACGTCAAGGGACAGTACACTCTGATCGATGCCGATGGCCACCGTCGTGTGGTTGACTACA 272
consensus_8430#2      ACGTCAAGGGACAGTACACTCTGATCGATGCCGATGGCCACCGTCGTGTGGTTGACTACA 264
                      *****   ***************** ***** *****  **** ** ***** ** ****

consensus_8430#0      CCGCCGATGAGCACAACGGATTCAACGCTGTCGTTCGCCGTGAGCCT------------- 337
consensus_8430#3      CCGCCGATGAGCACAACGGATTCAACGCTGTCGTTCGCCGTGAGCCT------------- 347
consensus_8430#1      CCGCCGATGAGCACAACGGATTCAACGCCGTCGTCCGCCGTGAGCCCCTGGAGGGACACA 332
consensus_8430#2      CCGCCGATGAGCACAACGGATTCAACGCCGTCGTCCGCCGTGAGCCCCTGGAGGGACACA 324
                      **************************** ***** ***********              

consensus_8430#0      -----GTGAAGACTGCTATCCCAGTCGCCAAGGTCGTTGCCCCCATTGCCAAGGTTTAC- 391
consensus_8430#3      -----GTGAAGACTGCTATCCCAGTCGCCAAGGTCGTTGCCCCCATTGCCAAGGTTTAC- 401
consensus_8430#1      AGCTGGTAAAGACCGTCGTCCCAGTGCACAAAGTTGCTGTACCAGTGGGCACAACTAATG 392
consensus_8430#2      AGCTGGTAAAGACCGTCGTCCCAGTGCACAAAGTTGCTGTACCAGTGG-CACA-CTAT-- 380
                           ** ***** *   *******   *** ** * **  **  * * **    *    

consensus_8430#0      GCTGCTCCTATCGCC-AAGGTCGCTGTCCCGGTTGCCAAGGTTGCTACCCTGCTTTATCA 450
consensus_8430#3      GCTGCTCCTATCGCC-AAGGTCGCTGTCCCGGTTGCCAAGGTTGCCTACCCAGCGTACCA 460
consensus_8430#1      GTTGCCCCTGGCTCTGAAGGTTGCGGTTCCTGTTGCCAAATATGCTGTCCCGGT-TGCCA 451
consensus_8430#2      GTTGCCCCTG-CTCTGAAGGTTGCGGTTCCTGTTGCCAAATATGCTGTCCCGGT-TGCCA 438
                      * *** ***  * *  ***** ** ** ** ********   ***   **     *  **

consensus_8430#0      CTACTAGGATGTTATACCAAATTTGTTGCCTAAGTAGTAAAAATTGTGTAAAACTANAAT 510
consensus_8430#3      CTACTAAGTTGGT-TGAAAAATGTGTTG-----ATAATAA--GTTGGCTAG---TTCAAT 509
consensus_8430#1      AGGTTCTG--GCTCCGGCTCATGTAGCT-----ACTGTGA--GCTTCTCTGCACCAAGTC 502
consensus_8430#2      AGGTTCTG--GCTCCGGCTCATGTAGCT-----ACTGTGA--GCTTCTCTGCACCAAGTC 489
                          *  *  * *       ** *             * *    *               

consensus_8430#0      TTACTGAANCTCGTCAAATGACAAATAACANAGAGTCACANCAATCAACGNAAACACGGC 570
consensus_8430#3      AAATAAAATCCTGTTG-----TAAATAACATCGA--CANAAAAAAAAA-GAAAACA-GGC 560
consensus_8430#1      TTACCTACCACTACTAAG-AACGTTTGACGC-GATGTATATGAAATAGTGTCAGTA---C 557
consensus_8430#2      TTACCTACCACTACTAAG-AACGTTTGACGC-GATGTATATGAAATAGTGTCAGTA---C 544
                        *   *                  * **   **   * *  **  *  *  *  *   *

consensus_8430#0      ATGGTTTGACGNNCCCGCAAAGCCTCTATGCCCCTTAACTGAGGGGTTAAATNNTAAGCA 630
consensus_8430#3      A----------------------------------------------------------- 561
consensus_8430#1      TTTGCAATAAATGTAGTAAAATTCGTTTCTATTTTCAAAAAAGTGTTTAAAAAGTGAGTG 617
consensus_8430#2      TTTGCAATAAATGTAGTAAAATTCGTTTCTATTTTCAAAAA------------------- 585
                                                                                  

consensus_8430#0      TTTGGGGACACTTGGCCGGTCAGTTNTAACAACAGGTCNGATTGGACTGGGGGAAAAACC 690
consensus_8430#3      ------------------------------------------------------------
consensus_8430#1      TATAATCATAATTTGAGTATAAATCTCAGAAGTATAACAAATGTCTCATGAAAAGCTACA 677
consensus_8430#2      ------------------------------------------------------------
                                                                                  

consensus_8430#0      CTTGN----CGGTAACCCAAGTGAAACCGCCTTGCAGAAAATCCCCCCNTTTAGTCCAAG 746
consensus_8430#3      ------------------------------------------------------------
consensus_8430#1      CATAGTATTCCGTAATTACGATTACTTTACTTGCCCCAACTGTACGATATCATAAGCATA 737
consensus_8430#2      ------------------------------------------------------------
                                                                                  

consensus_8430#0      CGGGCGATAATCAGCNGAGAAGGCCCGACCCGTATCGCCTTTCCCAACA 795
consensus_8430#3      -------------------------------------------------
consensus_8430#1      ACAGTGACTGCTACNAATTAAAGTAGATGCAATGTAA------------ 774
consensus_8430#2      -------------------------------------------------
                                                                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)