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Anopheles gambiae
cluster # 8450 cluster # 8450       Sequences # 10       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8450#0 length = 985 sequences # 5  
consensus_8450#1 length = 790 sequences # 1  
consensus_8450#2 length = 495 sequences # 2  
consensus_8450#3 length = 462 sequences # 1  
consensus_8450#4 length = 398 sequences # 1  

consensusID : consensus_8450#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 985
fasta sequence
                              [GCGTGCTAGTGTGTCTTGGTCTACGTGCGAATACTCTCAGCATCTCACAAAAAAATCCCATGAGTATCTCACGAACCACGTAGGAGAGTAGGGGAGTGAACGATTTATCTACCGACTGTGGCAGGCTTGCTTATCGTATTCGCAGCACAGTATCTGCCCGCGCAGGACATTTGGCGCGCCTGGGTTCGAGTTGAGTGTGCGCGATCAGATCGGTTCGCTTAGTGACTATCGAGCAAACACCTCCTCAGTGCTCTTGAAATAACGCGCGGCCGTTAACATTCCAATTCCGTTGTGATTCAAAATGTAGCACCATGAAGCTGCAGCAGTGCGTCATTGATTTCGCTATCATCCTGATAACGATCCCGTCGCTCGTCGTCGTGGCACTGCTACTGGACTACATGATGAACCGAACTGGGTGGGCGGAGCAGCTGGAGGCGCA-CTCATCATGGCCGCGCTGGCGGTAGCCTTCTTCCTGATCTGCATCATGATCTCCGTCTACCTGACGCATCGGGTCGGCAACT-GTCTCTGGGCCGGGCCGCAGCCGGACCAGCCGTCGATCTACTCGATCGAGCGCGGGCACGATGCCACCGTGCCACCACCGTCGTACGAGTCGGTGATGGGCGGTGACCATGCCCCACCATCGTACGAGAAGATCAGCAAGATCTTTCCACCGCCACAGGAACCGCCGCCCCCGTACGCCGTCGCGCTCGGTCGTGACGTGGCGGCCCACATCTGATCTACGTGCCATTGCGTGCGCCGTGCCGAGAGAGCCTCGGGAGCGGCTAACGCTCCCGTGCTTCTTGGCACCGTTCGCCCATCTTTGTTGTTGTTGTTGTTGTGTTGTAAAGACTGGTTGTGCGCTGTGCCCGCGTCGCGTTTAGTTTCGGGATGATTGCGAAATAATAAAA--AAAAGAAAGAATACCATGCGCTACTGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGGGCTGCG]

[+] EMBL CNS09EGS             [GCGTGCTAGTGTGTCTTGGTCTACGTGCGAATACTCTCAGCATCTCACAAAAAAATCCCATGAGTATCTCACGAACCACGTAGGAGAGTAGGGGAGTGAACGATTTATCTACCGACTGTGGCAGGCTTGCTTATCGTATTCGCAGCACAGTATCTGCCCGCGCAGGACATTTGGCGCGCCTGGGTTCGAGTTGAGTGTGCGCGATCAGATCGGTTCGCTTAGTGACTATCGAGCAAACACCTCCTCAGTGCTCTTGAAATAACGCGCGGCCGTTAACATTCCAATTCCGTTGTGATTCAAAATGTAGCACCATGAAGCTGCAGCAGTGCGTCATTGATTTCGCTATCATCCTGATAACGATCCCGTCGCTCGTCGTCGTGGCACTGCTACTGGACTACATGATGAACCGAACTGGGTGGGCGGAGCAGCTGGAGGCGCA CTCATCATGGCCGCGCTGGCGGTAG CTTCTTCCTGATCTGCATCATGATCTCCGTCTACCTGACGCATCGGGTCGGCAACT GTCTCTGGGCCGGGCCGCAGCCGGACCAGCCGTCGATCTACTCGATCGAGCGCGGGCACGATGCCACCGTGCCACCACCGTCGTACGAGTCGGTGATGGGCGGTGACCATGCCCCACCATCGTACGAGAAGATCAGCAAGATCTTTCCACCGCCACAGGAACCGCCGCCCCCGTACGCCGTCGCGCTCGGTCGTGACGTGGCGGCCCACATCTGATCTACGTGCCATTGCGTGCGCCGTGCCGAGAGAGCCTCGGGAGCGGCTAACGCTCCCGTGCTTCTTGGCACCGTTCGCCCATCTTTGTTGTTGTTGTTGTTGTGTTGTCCAGACTGGTTGTGCGCTGTGCCCGCGTCGCGTTTAGTTTCGGGATGATTGCGAAATAA                                                                                    ]
[+] EMBL CNS09LOM             [                                                                                                                                                             CCGCGCA GACATTTGGCGCGCCTGGGTTTGAGTTGAGTGTGCGCGATCAGATCGGTTCGCTTAGTGACTAACGAGCAA  ACCTCCTCAGTGCACTTGAAGTAACGCGTGGCGGTTAACATTCCAATTCCGTTGTGATTCAAAATGTAGCACCACGAAGCTGCAGCAGTGCGTCATTGATTTCGCTATCATCTTGATAACGATCCCGTCGCTCGTCGTCGTGGCACTGCTACTGGACTACATGATGAACCAAACTGGGTGGGCGGA CAGCTGGAGGCGCA CTCATCATGGCCGCGCTGGCGGTGGCCTTCTTCCTGATCTGCATCATGATCTCCGTCTACCTGACGCACCGGGTCGGCAACT GTCTCTGGGCCGGGCCGCAGCCGGACCAGCCGTCGATCTACTCGATCGAGCGCGGGCACGATGCCACCCTGCCACCACCGTCGTACGAGTCGGTGATGGGCGGCGACCATGCCCCACCGTCGTACGAGAAGATCAGCAAGATCTTTCCACCGCCACAGGAACCGCCGCCCCCGTACGCCGTAGCGCTCGGTCGTGACGTGGCGGCCTACATCTGATCTACGTGCCATTGCGTGCGCCGTGCCGAGAGAGCCTCGGGAGCGGCTAACGCTCCCGTGCTTCTTGGCACCGTTCGCCCATCT      TTGTTGTTGTTGTGTTGTAAAGACTGGTTGTGCGCTGTGCCCGCGTCG   TTAGTTTCGGGATGATTGCGAAATAAT  AA  AAAAGAAAG ATACCATGCGCTACTGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGGGCTGCG]
[-] EMBL CNS09EGT             [                                                                                                                                                                                                                                                                                                           AAATGTAGCACCATGAAGCTGCAGCAGTGCGTCATTGATTTCGCTATCATCCTGATAACGATCCCGTCGCTCGTCGTCGTGGGACTGCTACTGGACTACATGATGAACCGAACTGGGTGGGCGGAGCAGCTGGAGGCGCAGCTCATCATGGCCGCGCTGGCGGTAGCCTTCTTCCTGATCTGCATCATGATCTCCGTCTACCTGACGCATCGGGTCGGCAACT GTTTTTGGGCCGGGCCGCAGCCGGACCAGCCGTCGATCTACTCGATCGAGCGCGGGCACGATGCCACCGTGCCACCACCGTCGTACGAGTCGGTGATGGGCGGTGACCATGCCCCACCATCGTACGAGAAGATCAGCAAGATTTTTCCACCGCCACAGGAACCGCCGCCCCCGTACGCCGTCGCGCTCGGTCGTGACGTGGCGGCCCACATCTGATCTACGTGCCATTGCGTGCGCCGTGCCGAGAGAGCCTCGGGAGCGG TAACGCTCCCGTGCTTCTTGGCACCGTTCGCCCATCTTTGTTGTTGTTGTTGTTGTGTTGTAAAGACTGGTTGTGCGCTGTGCCCGCGTCGCGTTTAGTTTCGGGATGATTGCGAAATAATAAAA  AAAAGAAAGAA                                                                  ]
[-] EMBL AGA280679            [                                                                                                                                                                                                                                                                                                                                                                                                                                TGGGCGGAGCAGCTGGAGGCGCAGCTCATCATGGCCGCGCTGGCGGTGGCCTTCTTCCTGATCTGCATCATGATCTCCGTCTACCTGACGCACCGGGTCGGCAACT GTCTCTGGGCCGGGCCGCAGCCGGACCAGCCGTCGATCTACTCGATCGAGCGCGGGCACGATGCCACCCTGCCACCACCGTCGTACGAGTCGGTGATGGGCGGCGACCATGCCCCACCGTCGTACGAGAAGATCAGCAAGATCTTTCCACCGCCACAGGAACCGCCGCCCCCGTACGCCGTCGCGCTCGGTCGTGACGTGGCGGCCCACATCTGATCTACGTGCCATTGCGTGCGCCGTGTCGAGAGAGCCTCGGGAGCGGCTAACGCTCCCGTGCTTCTTGGCACCGTTCGCCCATCT   TTGTTGTTGTTGTTGTGTTGTAAAGACTGGTTGTGCGCTGTGCCCGCGTCG   ATAGTTTCGGGATGATTGCGAAAAAAaa                                                                                  ]
[-] EMBL BX466730             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCGGCAACTCGTCTCTGGGCCGGGCCGCAGCCGGACCAGCCGTCGATCTACTCGATCGAGCGCGGGCACGATGCCACCGTGCCACCACCGTCGTACGAGTCGGTGATGGGCGGTGACCATGCCCCACCATCGTACGAGAAGATCAGCAAGATCTTTCCACCGCCACAGGAACCGCCGCCCCCGTACGCCGTCGCGCTCGGTCGTGACGTGGCGGCCCACATCTGATCTACGTGCCATTGCGTGCGCCGTGCCGAGAGAGCCTCGGGAGCGGCTAACGCTCCCGTGCTTCTTGGCACCGTTCGCCCATCTTTGTTGTTGTTGTTGTTGTGTTGTAAAGACTGGTTGTGCGCTGTGCCCGCGTCGCGTTTAGTTTCGGGATGATTGCGAAATAATAAAATCACAACAAGGAACAGCATGCG                                                         ]


>consensus_8450#0 GCGTGCTAGTGTGTCTTGGTCTACGTGCGAATACTCTCAGCATCTCACAAAAAAATCCCA TGAGTATCTCACGAACCACGTAGGAGAGTAGGGGAGTGAACGATTTATCTACCGACTGTG GCAGGCTTGCTTATCGTATTCGCAGCACAGTATCTGCCCGCGCAGGACATTTGGCGCGCC TGGGTTCGAGTTGAGTGTGCGCGATCAGATCGGTTCGCTTAGTGACTATCGAGCAAACAC CTCCTCAGTGCTCTTGAAATAACGCGCGGCCGTTAACATTCCAATTCCGTTGTGATTCAA AATGTAGCACCATGAAGCTGCAGCAGTGCGTCATTGATTTCGCTATCATCCTGATAACGA TCCCGTCGCTCGTCGTCGTGGCACTGCTACTGGACTACATGATGAACCGAACTGGGTGGG CGGAGCAGCTGGAGGCGCACTCATCATGGCCGCGCTGGCGGTAGCCTTCTTCCTGATCTG CATCATGATCTCCGTCTACCTGACGCATCGGGTCGGCAACTGTCTCTGGGCCGGGCCGCA GCCGGACCAGCCGTCGATCTACTCGATCGAGCGCGGGCACGATGCCACCGTGCCACCACC GTCGTACGAGTCGGTGATGGGCGGTGACCATGCCCCACCATCGTACGAGAAGATCAGCAA GATCTTTCCACCGCCACAGGAACCGCCGCCCCCGTACGCCGTCGCGCTCGGTCGTGACGT GGCGGCCCACATCTGATCTACGTGCCATTGCGTGCGCCGTGCCGAGAGAGCCTCGGGAGC GGCTAACGCTCCCGTGCTTCTTGGCACCGTTCGCCCATCTTTGTTGTTGTTGTTGTTGTG TTGTAAAGACTGGTTGTGCGCTGTGCCCGCGTCGCGTTTAGTTTCGGGATGATTGCGAAA TAATAAAAAAAAGAAAGAATACCATGCGCTACTGCTCAAAAAAAAAAAAAAAAAAAAAAA AAAGGCCACATGTGCTCGGGCTGCG



consensusID : consensus_8450#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 790
fasta sequence
                              [CTGTTGGCCAACTGGATTCGCAGAACAGTATCTGCCCGCGCAGGACATTTGGCGCGCCTGGGTTTGAGTTGAGTGTGCGCGATCAGATCGGTTCGCTTAGTGACTAACGAGCAAACCTCCTCAGTGGACTTGAAGTAACGCGTGGCGGTTAAAATTCCAATTCCGTTGTGATTCAAAATGTAGCACCACGAAGCTGCAGCAGTGCGTCATTGATTTCGCTATCATCTTGATAACGATCCCGTCGCTCGTCGTCGTGGAACTGCTACTGGACTACATGATGAACCAAACTGGGTGGGCGGAGCAGCTGGAGGCGCAGCTCATCATGGCCGGGCTGGCGGTGGCCTTCTTCCTGTTCTGCATCATGATCTCCGTCTACCTGACGCACCGGGTCGGCAACTGTTTCTGGGCCGGGCCGCAGCCGGACCAGCCGTCGATCTACTCGATCGAGCGCGGGCACGATGCCACCCTGCCACCACCGTCGTACGAGTCGGTGATGGGCGGCGACCATGCCCCACCGTCGTACGAGAAGATCAGCAAGATTTTTCCACCGCCACAGGAACCGCCGCCCCCGTACGCCGTAGCGCTCGGTCGTGACGTGGCGGCCTACATCTGATCTACGTGCCATTGCGTGCGCCGTGCCGAGAGAGCCTCGGGAGCGGTAACGCTCCCGTGCTTCTTGGCACCGTTCGCCCATCTTTGTTGTTGTTGTGTTGTAAAAACTGGTTGTGCGCTGTGCCCGCGTCGTTAGTTTCGGGATGATTGCGAAATAATAAAAAAGAAAGATACCATG]

[-] EMBL CNS09LON             [CTGTTGGCCAACTGGATTCGCAGAACAGTATCTGCCCGCGCAGGACATTTGGCGCGCCTGGGTTTGAGTTGAGTGTGCGCGATCAGATCGGTTCGCTTAGTGACTAACGAGCAAACCTCCTCAGTGGACTTGAAGTAACGCGTGGCGGTTAAAATTCCAATTCCGTTGTGATTCAAAATGTAGCACCACGAAGCTGCAGCAGTGCGTCATTGATTTCGCTATCATCTTGATAACGATCCCGTCGCTCGTCGTCGTGGAACTGCTACTGGACTACATGATGAACCAAACTGGGTGGGCGGAGCAGCTGGAGGCGCAGCTCATCATGGCCGGGCTGGCGGTGGCCTTCTTCCTGTTCTGCATCATGATCTCCGTCTACCTGACGCACCGGGTCGGCAACTGTTTCTGGGCCGGGCCGCAGCCGGACCAGCCGTCGATCTACTCGATCGAGCGCGGGCACGATGCCACCCTGCCACCACCGTCGTACGAGTCGGTGATGGGCGGCGACCATGCCCCACCGTCGTACGAGAAGATCAGCAAGATTTTTCCACCGCCACAGGAACCGCCGCCCCCGTACGCCGTAGCGCTCGGTCGTGACGTGGCGGCCTACATCTGATCTACGTGCCATTGCGTGCGCCGTGCCGAGAGAGCCTCGGGAGCGGTAACGCTCCCGTGCTTCTTGGCACCGTTCGCCCATCTTTGTTGTTGTTGTGTTGTAAAAACTGGTTGTGCGCTGTGCCCGCGTCGTTAGTTTCGGGATGATTGCGAAATAATAAAAAAGAAAGATACCATG]


>consensus_8450#1 CTGTTGGCCAACTGGATTCGCAGAACAGTATCTGCCCGCGCAGGACATTTGGCGCGCCTG GGTTTGAGTTGAGTGTGCGCGATCAGATCGGTTCGCTTAGTGACTAACGAGCAAACCTCC TCAGTGGACTTGAAGTAACGCGTGGCGGTTAAAATTCCAATTCCGTTGTGATTCAAAATG TAGCACCACGAAGCTGCAGCAGTGCGTCATTGATTTCGCTATCATCTTGATAACGATCCC GTCGCTCGTCGTCGTGGAACTGCTACTGGACTACATGATGAACCAAACTGGGTGGGCGGA GCAGCTGGAGGCGCAGCTCATCATGGCCGGGCTGGCGGTGGCCTTCTTCCTGTTCTGCAT CATGATCTCCGTCTACCTGACGCACCGGGTCGGCAACTGTTTCTGGGCCGGGCCGCAGCC GGACCAGCCGTCGATCTACTCGATCGAGCGCGGGCACGATGCCACCCTGCCACCACCGTC GTACGAGTCGGTGATGGGCGGCGACCATGCCCCACCGTCGTACGAGAAGATCAGCAAGAT TTTTCCACCGCCACAGGAACCGCCGCCCCCGTACGCCGTAGCGCTCGGTCGTGACGTGGC GGCCTACATCTGATCTACGTGCCATTGCGTGCGCCGTGCCGAGAGAGCCTCGGGAGCGGT AACGCTCCCGTGCTTCTTGGCACCGTTCGCCCATCTTTGTTGTTGTTGTGTTGTAAAAAC TGGTTGTGCGCTGTGCCCGCGTCGTTAGTTTCGGGATGATTGCGAAATAATAAAAAAGAA AGATACCATG



consensusID : consensus_8450#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 495
fasta sequence
                              [AATCCCGAGGTTATTTGCCGCGCAGGACATTTGGCGCGCCTGGGTTCGAGTTGAGTGTGCGCGATCAGATCGGTTCGCTTAGTGACTATCGAGCAAACACCTCCTCAGTGCTCTTGAAATAACGTGCGGCCGTTAACATTCCAATTCCGTTGTGATTCAAAATGTAGCACCATGAAGCTGCAGCAGTGCGTCATTGATTTCGCTATCATCCTGATAACGATCCCGTCGCTCGTCGTCGTGGCACTGCTACTGGACTACATGATGAACCGAACTGGGTGGGCGGAGCAGCTGGAGGCGCAGCTCATCATGGCCGCGCTGGCGGTAGCCTTCTTCCTGATCTGCATCATGATCTCCGTCTACCTGACGCATCGGGTCGGCAACTGTCTCTGGGCCGGGCCGCAGCCGGACCAGCCGTCGATCTACTCGATCGAGCGCGGGCACGATGCCACCGTGCCACCACCGTCGTACGAGTCGGTGATGGGCGGTGACCATGCC]

[+] EMBL AL695191             [AATCCCGAGGTTATTTGCCGCGCAGGACATTTGGCGCGCCTGGGTTCGAGTTGAGTGTGCGCGATCAGATCGGTTCGCTTAGTGACTATCGAGCAAACACCTCCTCAGTGCTCTTGAAATAACGTGCGGCCGTTAACATTCCAATTCCGTTGTGATTCAAAATGTAGCACCATGAAGCTGCAGCAGTGCGTCATTGATTTCGCTATCATCCTGATAACGATCCCGTCGCTCGTCGTCGTGGCACTGCTACTGGACTACATGATGAACCGAACTGGGTGGGCGGAGCAGCTGGAGGCGCAGCTCATCATGGCCGCGCTGGCGGTAGCCTTCTTCCTGATCTGCATCATGATCTCCGTCTACCTGACGCATCGGGTCGGCAACTGTCTCTGGGCCGGGCCGCAGCCGGACCAGCCGTCGATCTACTCGATCGAGCGCGGGCACGATGCCACCGTGCCACCACCGTCGTACGAGTCGGTGATGGGCGGTGACCATGCC]
[+] EMBL AL694225             [    CCCAGGAT TTTGCCGCGCAGGACATTTGGCGCGCCTGGGTTCGAGTTGAGTGTGCGCGATCAGATCGGTTCGCTTAGTGACTATCGAGCAAACACCTCCTCAGTGCTCTTGAAATAACGCGCGGCCGTTAACATTCCAATTCCGTTGTGATTCAAAATGTAGCACCATGAAGCTGCAGCAGTGCGTCATTGATTTCGCTATCATCCTGATAACGATCCCGTCGCTCGTCGTCGTGGCACTGCTACTGGACTACATGATGAACCGAACTGGGTGGGCGGAGCAGCTGGAGGCGCAGCTCATCATGGCCGCGCTGGCGGTAGCCTTCTTCCTGATCTGCATCATGATCTCCGTCTACCTGACGCATCGGGTCGGCAACTGTCTCTGGGCCGGGCCGCAGCCGGACCAGCCGTCGATCTACTCGATCGAGCGCGGGCACGATGCCACCGTGCCACCACCGTCGTACGAGTCGGTGATG               ]


>consensus_8450#2 AATCCCGAGGTTATTTGCCGCGCAGGACATTTGGCGCGCCTGGGTTCGAGTTGAGTGTGC GCGATCAGATCGGTTCGCTTAGTGACTATCGAGCAAACACCTCCTCAGTGCTCTTGAAAT AACGTGCGGCCGTTAACATTCCAATTCCGTTGTGATTCAAAATGTAGCACCATGAAGCTG CAGCAGTGCGTCATTGATTTCGCTATCATCCTGATAACGATCCCGTCGCTCGTCGTCGTG GCACTGCTACTGGACTACATGATGAACCGAACTGGGTGGGCGGAGCAGCTGGAGGCGCAG CTCATCATGGCCGCGCTGGCGGTAGCCTTCTTCCTGATCTGCATCATGATCTCCGTCTAC CTGACGCATCGGGTCGGCAACTGTCTCTGGGCCGGGCCGCAGCCGGACCAGCCGTCGATC TACTCGATCGAGCGCGGGCACGATGCCACCGTGCCACCACCGTCGTACGAGTCGGTGATG GGCGGTGACCATGCC



consensusID : consensus_8450#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 462
fasta sequence
                              [AAGATCCCCNAGGTTAAACAGATCGGTTCGCTTACTGACTATNGAGCAACACCTCCTCAGTGCTCTTGAAATAACGCGCGGCCGTTAACATTCCAATTCCGTTGTGATTCAAAATGTAGCACCATGAAGCTGCAGCAGTGCGTCATTGATTTCGCTATCATCCTGATAACGATCCCGTCGCTCGTCGTCGTGGCACTGCTACTGGACTACATGATGAACCGAACTGGGTGGGCGGAGCAGCTGGAGGCGCAGCTCATCATGGCCGCGCTGGCGGTAGCCTTCTTCCTGATCTGCATCATGATCTCCGTCTAACTGACGCATCGGGTCGGCAACTGTCTCTGGGCCGGGCCGCAGCCGGACCAGCCGTCGATCTACTCGATCGAGCGCGGGCACGATGCCACCGTGCACCACCGTCGTACGAGTCGGTGATGGGCGGTGACCATGGGCCCCACATCGTACGAG]

[+] EMBL AL929678             [AAGATCCCCNAGGTTAAACAGATCGGTTCGCTTACTGACTATNGAGCAACACCTCCTCAGTGCTCTTGAAATAACGCGCGGCCGTTAACATTCCAATTCCGTTGTGATTCAAAATGTAGCACCATGAAGCTGCAGCAGTGCGTCATTGATTTCGCTATCATCCTGATAACGATCCCGTCGCTCGTCGTCGTGGCACTGCTACTGGACTACATGATGAACCGAACTGGGTGGGCGGAGCAGCTGGAGGCGCAGCTCATCATGGCCGCGCTGGCGGTAGCCTTCTTCCTGATCTGCATCATGATCTCCGTCTAACTGACGCATCGGGTCGGCAACTGTCTCTGGGCCGGGCCGCAGCCGGACCAGCCGTCGATCTACTCGATCGAGCGCGGGCACGATGCCACCGTGCACCACCGTCGTACGAGTCGGTGATGGGCGGTGACCATGGGCCCCACATCGTACGAG]


>consensus_8450#3 AAGATCCCCNAGGTTAAACAGATCGGTTCGCTTACTGACTATNGAGCAACACCTCCTCAG TGCTCTTGAAATAACGCGCGGCCGTTAACATTCCAATTCCGTTGTGATTCAAAATGTAGC ACCATGAAGCTGCAGCAGTGCGTCATTGATTTCGCTATCATCCTGATAACGATCCCGTCG CTCGTCGTCGTGGCACTGCTACTGGACTACATGATGAACCGAACTGGGTGGGCGGAGCAG CTGGAGGCGCAGCTCATCATGGCCGCGCTGGCGGTAGCCTTCTTCCTGATCTGCATCATG ATCTCCGTCTAACTGACGCATCGGGTCGGCAACTGTCTCTGGGCCGGGCCGCAGCCGGAC CAGCCGTCGATCTACTCGATCGAGCGCGGGCACGATGCCACCGTGCACCACCGTCGTACG AGTCGGTGATGGGCGGTGACCATGGGCCCCACATCGTACGAG



consensusID : consensus_8450#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 398
fasta sequence
                              [AGGCCAGAATCGCCACGAGGNTANATCTTGCCCGCGCAGGACATTTGGCGCGCCCTTGGGTTCGAGTTGAGTGTGCGCGATCAGATCGGTTCGCTTAGTGACTATCGAGCAAACACCTCCTCAGGTGCTCTTGAAGGTAACGCGCGGCCGTTAACATTCCAATTCCGCGTGTGTGATTCAAAAGTGTAGCACCATGAAGCTGCAGCAGNTGCGTCCATTGATTTCGCTATCATCCTGATAACGATCCCGTCGCTCGCTACGTACGCTGGCGACGTGCGTACTTGGGACTACACTGATNGAACCGAACTGGGTGGGCGGAGCAGCTGGAGGCTGCAGCTCATCATGGCCTGCGCTGGCAGGTGGCCTTCTTCCTGATCTGNCATCAGTGATCTCCGTCT]

[+] EMBL BX468958             [AGGCCAGAATCGCCACGAGGNTANATCTTGCCCGCGCAGGACATTTGGCGCGCCCTTGGGTTCGAGTTGAGTGTGCGCGATCAGATCGGTTCGCTTAGTGACTATCGAGCAAACACCTCCTCAGGTGCTCTTGAAGGTAACGCGCGGCCGTTAACATTCCAATTCCGCGTGTGTGATTCAAAAGTGTAGCACCATGAAGCTGCAGCAGNTGCGTCCATTGATTTCGCTATCATCCTGATAACGATCCCGTCGCTCGCTACGTACGCTGGCGACGTGCGTACTTGGGACTACACTGATNGAACCGAACTGGGTGGGCGGAGCAGCTGGAGGCTGCAGCTCATCATGGCCTGCGCTGGCAGGTGGCCTTCTTCCTGATCTGNCATCAGTGATCTCCGTCT]


>consensus_8450#4 AGGCCAGAATCGCCACGAGGNTANATCTTGCCCGCGCAGGACATTTGGCGCGCCCTTGGG TTCGAGTTGAGTGTGCGCGATCAGATCGGTTCGCTTAGTGACTATCGAGCAAACACCTCC TCAGGTGCTCTTGAAGGTAACGCGCGGCCGTTAACATTCCAATTCCGCGTGTGTGATTCA AAAGTGTAGCACCATGAAGCTGCAGCAGNTGCGTCCATTGATTTCGCTATCATCCTGATA ACGATCCCGTCGCTCGCTACGTACGCTGGCGACGTGCGTACTTGGGACTACACTGATNGA ACCGAACTGGGTGGGCGGAGCAGCTGGAGGCTGCAGCTCATCATGGCCTGCGCTGGCAGG TGGCCTTCTTCCTGATCTGNCATCAGTGATCTCCGTCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8450#1      ------------------------------------------------------------
consensus_8450#3      ------------------------------------------------------------
consensus_8450#0      GCGTGCTAGTGTGTCTTGGTCTACGTGCGAATACTCTCAGCATCTCACAAAAAAATCCCA 60
consensus_8450#2      ------------------------------------------------------------
consensus_8450#4      ------------------------------------------------------------
                                                                                  

consensus_8450#1      ------------------------------------------------------------
consensus_8450#3      ------------------------------------------------------------
consensus_8450#0      TGAGTATCTCACGAACCACGTAGGAGAGTAGGGGAGTGAACGATTTATCTACCGACTGTG 120
consensus_8450#2      ------------------------------------------------------------
consensus_8450#4      ------------------------------------------------------------
                                                                                  

consensus_8450#1      --CTGTTGGCCAACTGGATTCGCAGAACAGTATCTGCCCGCGCAGGACATTTGGCGCGCC 58
consensus_8450#3      ------------------------------------------------------------
consensus_8450#0      GCAGGCTTGCTTATCGTATTCGCAGCACAGTATCTGCCCGCGCAGGACATTTGGCGCGCC 180
consensus_8450#2      --------------------AATCCCGAGGTTATTTGCCGCGCAGGACATTTGGCGCGCC 40
consensus_8450#4      ------AGGCCAGAATCGCCACGAGGNTANATCTTGCCCGCGCAGGACATTTGGCGCGCC 54
                                                                                  

consensus_8450#1      --TGGGTTTGAGTTGAGTGTGCGCGATCAGATCGGTTCGCTTAGTGACTAACGAGCAA-- 114
consensus_8450#3      ---------AAGATCCCCNAGGTTAAACAGATCGGTTCGCTTACTGACTATNGAGCAAC- 50
consensus_8450#0      --TGGGTTCGAGTTGAGTGTGCGCGATCAGATCGGTTCGCTTAGTGACTATCGAGCAAAC 238
consensus_8450#2      --TGGGTTCGAGTTGAGTGTGCGCGATCAGATCGGTTCGCTTAGTGACTATCGAGCAAAC 98
consensus_8450#4      CTTGGGTTCGAGTTGAGTGTGCGCGATCAGATCGGTTCGCTTAGTGACTATCGAGCAAAC 114
                                ** *      *    * **************** ******  ******  

consensus_8450#1      ACCTCCTCAG-TGGACTTGAAG-TAACGCGTGGCGGTTAAAATTCCAATTCCGT---TGT 169
consensus_8450#3      ACCTCCTCAG-TGCTCTTGAAA-TAACGCGCGGCCGTTAACATTCCAATTCCGT---TGT 105
consensus_8450#0      ACCTCCTCAG-TGCTCTTGAAA-TAACGCGCGGCCGTTAACATTCCAATTCCGT---TGT 293
consensus_8450#2      ACCTCCTCAG-TGCTCTTGAAA-TAACGTGCGGCCGTTAACATTCCAATTCCGT---TGT 153
consensus_8450#4      ACCTCCTCAGGTGCTCTTGAAGGTAACGCGCGGCCGTTAACATTCCAATTCCGCGTGTGT 174
                      ********** **  ******  ***** * *** ***** ************    ***

consensus_8450#1      GATTCAAAA-TGTAGCACCACGAAGCTGCAGCAGT-GCGTC-ATTGATTTCGCTATCATC 226
consensus_8450#3      GATTCAAAA-TGTAGCACCATGAAGCTGCAGCAGT-GCGTC-ATTGATTTCGCTATCATC 162
consensus_8450#0      GATTCAAAA-TGTAGCACCATGAAGCTGCAGCAGT-GCGTC-ATTGATTTCGCTATCATC 350
consensus_8450#2      GATTCAAAA-TGTAGCACCATGAAGCTGCAGCAGT-GCGTC-ATTGATTTCGCTATCATC 210
consensus_8450#4      GATTCAAAAGTGTAGCACCATGAAGCTGCAGCAGNTGCGTCCATTGATTTCGCTATCATC 234
                      ********* ********** *************  ***** ******************

consensus_8450#1      TTGATAACGATCCCGTCGCTCGT------CGTCGTGGAACTGC-TACT--GGACTACA-T 276
consensus_8450#3      CTGATAACGATCCCGTCGCTCGT------CGTCGTGGCACTGC-TACT--GGACTACA-T 212
consensus_8450#0      CTGATAACGATCCCGTCGCTCGT------CGTCGTGGCACTGC-TACT--GGACTACA-T 400
consensus_8450#2      CTGATAACGATCCCGTCGCTCGT------CGTCGTGGCACTGC-TACT--GGACTACA-T 260
consensus_8450#4      CTGATAACGATCCCGTCGCTCGCTACGTACGCTGGCGACGTGCGTACTTGGGACTACACT 294
                       *********************       **  *  *   *** ****  ******** *

consensus_8450#1      GATG-AACCAAACTGGGTGGGCGGAGCAGCTGGAGGC-GCAGCTCATCATGGCC-GGGCT 333
consensus_8450#3      GATG-AACCGAACTGGGTGGGCGGAGCAGCTGGAGGC-GCAGCTCATCATGGCC-GCGCT 269
consensus_8450#0      GATG-AACCGAACTGGGTGGGCGGAGCAGCTGGAGGC-GCA-CTCATCATGGCC-GCGCT 456
consensus_8450#2      GATG-AACCGAACTGGGTGGGCGGAGCAGCTGGAGGC-GCAGCTCATCATGGCC-GCGCT 317
consensus_8450#4      GATNGAACCGAACTGGGTGGGCGGAGCAGCTGGAGGCTGCAGCTCATCATGGCCTGCGCT 354
                      ***  **** *************************** *** ************ * ***

consensus_8450#1      GGC-GGTGGCCTTCTTCCTGTTCTGC-ATCA-TGATCTCCGTCTACCTGACGCACCGGGT 390
consensus_8450#3      GGC-GGTAGCCTTCTTCCTGATCTGC-ATCA-TGATCTCCGTCTAACTGACGCATCGGGT 326
consensus_8450#0      GGC-GGTAGCCTTCTTCCTGATCTGC-ATCA-TGATCTCCGTCTACCTGACGCATCGGGT 513
consensus_8450#2      GGC-GGTAGCCTTCTTCCTGATCTGC-ATCA-TGATCTCCGTCTACCTGACGCATCGGGT 374
consensus_8450#4      GGCAGGTGGCCTTCTTCCTGATCTGNCATCAGTGATCTCCGTCT---------------- 398
                      *** *** ************ ****  **** ************                

consensus_8450#1      CGGCAACTGTTTCTGGGCCGGGCCGCAGCCGGACCAGCCGTCGATCTACTCGATCGAGCG 450
consensus_8450#3      CGGCAACTGTCTCTGGGCCGGGCCGCAGCCGGACCAGCCGTCGATCTACTCGATCGAGCG 386
consensus_8450#0      CGGCAACTGTCTCTGGGCCGGGCCGCAGCCGGACCAGCCGTCGATCTACTCGATCGAGCG 573
consensus_8450#2      CGGCAACTGTCTCTGGGCCGGGCCGCAGCCGGACCAGCCGTCGATCTACTCGATCGAGCG 434
consensus_8450#4      ------------------------------------------------------------
                                                                                  

consensus_8450#1      CGGGCACGATGCCACCCTGCCACCACCGTCGTACGAGTCGGTGATGGGCGGCGACCATGC 510
consensus_8450#3      CGGGCACGATGCCACCGTGC-ACCACCGTCGTACGAGTCGGTGATGGGCGGTGACCATGG 445
consensus_8450#0      CGGGCACGATGCCACCGTGCCACCACCGTCGTACGAGTCGGTGATGGGCGGTGACCATGC 633
consensus_8450#2      CGGGCACGATGCCACCGTGCCACCACCGTCGTACGAGTCGGTGATGGGCGGTGACCATGC 494
consensus_8450#4      ------------------------------------------------------------
                                                                                  

consensus_8450#1      -CCCACCGTCGTACGAGAAGATCAGCAAGATTTTTCCACCGCCACAGGAACCGCCGCCCC 569
consensus_8450#3      GCCCCACATCGTACGAG------------------------------------------- 462
consensus_8450#0      -CCCACCATCGTACGAGAAGATCAGCAAGATCTTTCCACCGCCACAGGAACCGCCGCCCC 692
consensus_8450#2      C----------------------------------------------------------- 495
consensus_8450#4      ------------------------------------------------------------
                                                                                  

consensus_8450#1      CGTACGCCGTAGCGCTCGGTCGTGACGTGGCGGCCTACATCTGATCTACGTGCCATTGCG 629
consensus_8450#3      ------------------------------------------------------------
consensus_8450#0      CGTACGCCGTCGCGCTCGGTCGTGACGTGGCGGCCCACATCTGATCTACGTGCCATTGCG 752
consensus_8450#2      ------------------------------------------------------------
consensus_8450#4      ------------------------------------------------------------
                                                                                  

consensus_8450#1      TGCGCCGTGCCGAGAGAGCCTCGGGAGCGG-TAACGCTCCCGTGCTTCTTGGCACCGTTC 688
consensus_8450#3      ------------------------------------------------------------
consensus_8450#0      TGCGCCGTGCCGAGAGAGCCTCGGGAGCGGCTAACGCTCCCGTGCTTCTTGGCACCGTTC 812
consensus_8450#2      ------------------------------------------------------------
consensus_8450#4      ------------------------------------------------------------
                                                                                  

consensus_8450#1      GCCCATCTTTGTTGTTGTTGT------GTTGTAAAAACTGGTTGTGCGCTGTGCCCGCGT 742
consensus_8450#3      ------------------------------------------------------------
consensus_8450#0      GCCCATCTTTGTTGTTGTTGTTGTTGTGTTGTAAAGACTGGTTGTGCGCTGTGCCCGCGT 872
consensus_8450#2      ------------------------------------------------------------
consensus_8450#4      ------------------------------------------------------------
                                                                                  

consensus_8450#1      CG---TTAGTTTCGGGATGATTGCGAAATAATAAAAAAGAAAGATACCATG--------- 790
consensus_8450#3      ------------------------------------------------------------
consensus_8450#0      CGCGTTTAGTTTCGGGATGATTGCGAAATAATAAAAAAAAGAAAGAATACCATGCGCTAC 932
consensus_8450#2      ------------------------------------------------------------
consensus_8450#4      ------------------------------------------------------------
                                                                                  

consensus_8450#1      -----------------------------------------------------
consensus_8450#3      -----------------------------------------------------
consensus_8450#0      TGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGGGCTGCG 985
consensus_8450#2      -----------------------------------------------------
consensus_8450#4      -----------------------------------------------------
                                                                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)