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Anopheles gambiae
cluster # 8452 cluster # 8452       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8452#0 length = 1590 sequences # 8  
consensus_8452#1 length = 939 sequences # 1  
consensus_8452#2 length = 334 sequences # 1  

consensusID : consensus_8452#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1590
fasta sequence
                              [CCGCTTCGATCGGTACAGTCGCGAAGTAAACAGCAGGTAGTACCCGGTAGAACCGTAACTCGGTAGAACTCGGCCAGAACACCCTGCAAAAGGAAGTGGCACCGCGTACCTGGTTCGACCTTTGCCCAACGGTTGGCGGCGACTAACGATCATTAGAATTGCAACGCTTCAATTAAAACCGTGTGTGTGCGCGAGCCGGTATTCGAGTGCATGTGTGTGTGTGTGATTGTGATCTAAGTAAATCCCAGATTTAAATTACTGTTCCGCTAGCTGGTAGGTGAACCCGTTATAGCGCAGGTATCGTGTTCGCGTCGCGCTTAGACAATCGGCTGCAGGTGTTTTGCGCGGCTGCTGTGCAAAGCTAGCGACGCAAGTGTCGCGGTTCCCCCCCCCCCCCCCCACACAGGGACAACAGAACCTCCCCCCTTCGCTCATCAACAATCGACATCGGACGCACCTAGCACCATTGACAGTCACAATGGAGCTGCTGCTGAAGCTGGTTGCGCTGATCCTGCGCGTGGTTAATCTCGTGCTCGAGCCAATCCTCGCCCGGCTGGCTGGTCCAGCCCGCGTCGACCCCTTTCCTGCGATACGGGACGAGCTGCTGCGGCTACCGGCAACCGAGCTGGCCGAAAGGATACGCCAGGGCAAGCTGCGCTCGGTCGAGCTGGTGCGGGCGTACGTGCTGCGCATACGCGAGGTGAACCCGCTGATCAATGCGGTCGTCGAGGAACGGTTCGAGGCGGCCCTCGGCGAGGCGGCC-GAA--GCGGACGA-ACGGGTGGCGGCGTGCGGCGGGGACGAGCAGGCAGTGAAGGAGCTGGCCCGCACCAGTCCGCTGCTCGGTGTACCGATCACCGTGAAGGAAAGCTGCTCGGTCAAGGGCCTTTCGCTGGGCGGTGGAGTGGTACGACGGCAGAACCTAACGGCGGAAGAGGACGGTGAGGCGGTGGGGCGGCTGCGCCGGGCGGGCGCTATCCCGCTGCTCGTGTCCAACACGCCCGAGTACTGTATGGCGTTCGAGTCGTACAACAACGTGACCGGGCGGACGCTCAACCCGTACGATCCGCGCCGTACGCCGGCCGGTTCGT--CCGGCGGGGAAGGTGCGCT-GCTCGGCGCGGGCGCATCGGT-GTGT----GGGGTGGGCAGTGATCT-CGGCGGATCGATCCGCATACCGGCCCTGTTCTGTGGCATCTTCGGACACAAACCATCGGCAGGAATCGTACCCATCAAAGGGCACATGCCCGTCTGTGGCGATGCACAC-TTCGACCAGTATCTCTCCCTCGGGCCAATGTGCCGTTACGCCAA-GGATCTGCCGC-TGC-TGC-TCGAGATTA-TGGC-AGGGCC-GAATGC-AAGCCGCCTCC-GCCTA-GCCGAACC-GGTCAAC---GTGGAC-AAGGTGA-A-GATCTAC-TA-CCC-GCA-GAAGC-TCG-ACC-TGACCGTGAACG-CCGTCCCGATTGCGCCGGAAATTCGCGAATCCCTGCGCAGTGCGCTGAAATACTTCCAGAACAAGGGCGGCTACACGGAACCGCTCAACTTCCGCTACTTCGCCGACAGCATGCAGCTGGCCTCGACCGAGCTGCAGTCGCTCACGGACGTGCCGAACGTGTT]

[+] EMBL BM650834             [CCGCTTCGATCGGTACAGTCGCGAAGTAAACAGCAGGTAGTACCCGGTAGAACCGTAACTCGGTAGAACTCGGCCAGAACACCCTGCAAAAGGAAGTGGCACCGCGTACCTGGTTCGACCTTTGCCCAACGGTTGGCGGCGACTAACGATCATTAGAATTGCAACGCTTCAATTAAAACCGTGTGTGTGCGCGAGCCGGTATTCGAGTGCATGTGTGTGTGTGTGATTGTGATCTAAGTAAATCCCAGATTTAAATTACTGTTCCGCTAGCTGGTAGGTGAACCCGTTATAGCGCAGGTATCGTGTTCGCGTCGCGCTTAGACAATCGGCTGCAGGTGTTTTGCGCGGCTGCTGTGCAAAGCTAGCGACGCAAGTGTCGCGGTTCCCCCCCCCCCCCCCCACACAGGGACAACAGAACCTCCCCCCTTCGCTCATCAACAATCGACATCGGACGCACCTAGCACCATTGACAGTCACAATGGAGCTGCTGCTGAAGCTGGTTGCGCTGATCCTGCGCGTGGTTAATCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM647107             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ccgGCTGAAGCTGGTTGCGCTGATCCTGCGCGTGGTTAATCTCGTGCTCGAGCCAATCCTCGCCCGGCTGGCTGGTCCAGCCCGCGTCGACCCCTTTCCTGCGATACGGGACGAGCTGCTGCGGCTACCGGCAACCGAGCTGGCCGAAAGGATACGCCAGGGCAAGCTGCGCTCGGTCGAGCTGGTGCGGGCGTACGTGCTGCGCATACGCGAGGTGAACCCGCTGATCAATGCGGTCGTCGAGGAACGGTTCGAGGCGGCCCTCGGCGAGGCGGCC GAA  GCGGACGA ACGGGTGGCGGCGTGCGGCGGGGACGAGCAGGCAGTGAAGGAGCTGGCCCGCACCAGTCCGCTGCTCGGTGTACCGATCACCGTGAAGGAAAGCTGCTCGGTCAAGGGCCTTTCGCTGGGCGGTGGAGTGGTACGACGGCAGAACCTAACGGCGGAAGAGGACGGTGAGGCGGTGGGGCGGCTGCGCCGGGCGGGCGCTATCCCGCTGCTCGTGTCCAACACGCCCGAGTACTGTATGGCGTTCGAGTCGTACAACAACGTGACCGGGCGGACGCTCAACCCGTACGATCCGCGCCGTACGCCGGCCGGTTCGTCCCCGGCGGGGAAGGTGCGCTGGCTCGGCGCGGGCGCATCGGT GGGTGGGGGGGGTGGGCAGTGATCTCCGGCGGATCGATCCGCATACCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX624734             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTGGTGCGGGCGTACGTGCTGCGCATACGCGAGGTGAACCCGCTGATCAATGCGGTCGTCGAGGAACGGTTCGAGGCGGCCCTCGGCGAGGCGGCC GAA  GCGGACGA ACGGGTGGCGGCGTGCGGCGGGGACGAGCAGGCAGTGAAGGAGCTGGCCCGCACCAGTCCGCTGCTCGGTGTACCGATCACCGTGAAGGAAAGCTGCTCGGTCAAGGGCCTTTCGCTGGGCGGTGGAGTGGTACGACGGCAGAACCTAACGGCGGAAGAGGACGGTGAGGCGGTGGGGCGGCTGCGCCGGGCGGGCGCTATCCCGCTGCTCGTGTCCAACACGCCCGAGTACTGTATGGCGTTCGAGTCGTACAACAACGTGACCGGGCGGACGCTCAACCCGTACGATCCGCGCCGTACGCCGGCCGGTTCGT  CCGGCGGGGAAGGTGCGCT GCTCGGCGCGGGCGCATCGGT GTGT    GGGGTGGGCAGTGATCT CGGCGGATCGATCCGCATACCGGCCCTGTTCTGTGGCATCTTCGGACACAAACCATCGGCAGGAATCGTACCCATCAAAGGGCACATGCCCGTCTGTGGCGATGCACAC TTCGACCAGTATCTCTCCCTCGGGCCAATGTGCCGTTACGCCAA GGATCTGCCGC TGC TGC TCGAGATTA TGGC AGGGCC GAATGC AAGCCGCCTCC GCCTA GCCGAACC GGTCAAC   GTGGAC AAGGTGA A GATCTAC TA CCC GCA GAAGC TCG ACC TGACCGTGAACGCCCGTCCCGATTGCCCCGGAAATTCGCGAATC                                                                                                                                    ]
[+] EMBL BM614986             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ccgGGAACGGTTCGAGGCGGCCCTCGGCGAAGCGGCC GAA  GCGGACGA ACGGGTGGCGGCGTGCGGCGGGGACGAGCAGGCAGTGAAGGAGCTGGCCCGCACCAGTCCGCTGCTCGGCGTACCGATCACCGTGAAGGAAAGCTGCTCGGTCAAGGGCCTTTCGCTGGGCGGTGGAGTGGTACGGCGGCAGAATCTAACGGCGGAAGAGGACGGTGAGGCGGTGGGGCGGCTGCGCCGGGCGGGCGCTATCCCGCTGCTCGTGTCCAACACGCCCGAGTACTGTATGGCGTTCGAGTCGTACAACAACGTGACCGGGCGGACACTCAACCCGTACGATCCGCGCCGTACGCCGGCCGGTTCGT  CCGGCGGGGAAGGTGCGCT GCTTGGCGCGGGCGCATCGGT GTGT    GGGGTGGGCAGTGATCT CGGCGGATCGATCCGCATACCGGCCCTGTTCTGTGGCATCTTTGGACACAAACCATCGGCAGGAATCGTACCCATCAAAGGGCACATGCCCGTCTGTGGCGATGCACAC TTCGACCAGTATCTCTCCCTCGGGCCAATGTGCCGTTACGCCAA GGATCTGCCGC TGC TGC TCGAAATTA TGGC AGGGCC GAATGC AAGCCGCCTCC GCCTA GCCGAACC GGTCAAC   GTGGACAAAGGTGA A GAT                                                                                                                                                                                                              ]
[+] EMBL BX467352             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      aGGCCAGAATCGCGCACGAGGCGGGTGGCGGCGTGCGGCGGGGACGAGCAGGCAGTGAAGGAGCTGGCCCGCACCAGTCCGCTGCTCGGTGTACCGATCACCGTGAAGGAAAGCTGCTCGGTCAAGGGCCTTTCGCTGGGCGGTGGAGTGGTACGACGGCAGAACCTAACGGCGGAAGAGGACGGTGAGGCGGTGGGGCGGCTGCGCCGGGCGGGCGCTATCCCGCTGCTCGTGTCCAACACGCCCGAGTACTGTATGGCGTTCGAGTCGTACAACAACGTGACCGGGCGGACGCTCAACCCGTACGATCCGCGCCGTACGCCGGCCGGTTCGT  CCGGCGGGGAAGGTGCGCT GCTCGGCGCGGGCGCATCGGTAGTGT    GGGGTGGGCAGTGATCT CGGCGGATCGATCCGNATACCGGCCCTGTTCTGTGGCATCTTCGGACACAAACCATCGGCAGGAATCGTACCCATCAAAGGGCACATGCCCGTCTGTGGCGATGCACACGTTCGACCAGTATCTCTCCCTCGGGCCAATGTGCCGTTACGCCAAGGGATCTGCCGCTTGCGTGCTTCGAGATTATTGGCAAGGGCCGGAATGCNAGGCCGCTTCCGGCTTAGGCCGAACCGGGTCAACACGGTGGACGAAGGTGACAGGATCTACGTATCCCGGCAGGAAGCGTCGAACCTTGACCGTGA                                                                                                                                                                       ]
[+] EMBL BX608765             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGTCCGCTGCTCGGTGTACCGATCACCGTGAAGGAAAGCTGCTCGGTCAAGGGCCTTTCGCTGGGCGGTGGAGTGGTACGACGGCAGAACCTAACGGCGGAAGAGGACGGTGAGGCGGTGGGGCGGCTGCGCCGGGCGGGCGCTATCCCGCTGCTCGTGTCCAACACGCCCGAGTACTGTATGGCGTTCGAGTCGTACAACAACGTGACCGGGCGGACGCTCAACCCGTACGATCCGCGCCGTACGCCGGCCGGTTCGT  CCGGCGGGGAAGGTGCGCT GCTCGGCGCGGGCGCATCGGT GTGT    GGGGTGGGCAGTGATCT CGGCGGATCGATCCGCATACCGGCCCTGTTCTGTGGCATCTTCGGACACAAACCATCGGCAGGAATCGTACCCATCAAAGGGCACATGCCCGTCTGTGGCGATGCACAC TTCGACCAGTATCTCTCCCTCGGGCCAATGTGCCGTTACGCCAA GGATCTGCCGC TGC TGC TCGAGATTA TGGC AGGGCC GAATGC AAGCCGCCTCC GCCTA GCCGAACC GGTCAAC   GTGGAC AAGGTGA A GATCTAC TA CCC GCA GAAGC TCG ACC TGACCGTGAACG CCGTCCCGATTGCGCCGGAAATTCGCGAATCCCTGCGCAGTGCGCTGAAATACTTCCAGAACAAGGGCGGCTACACGGAACCGCTCAACTTCCGCTACTTCGCCGACAGCATGCAGCTGGCCTCGACCGAGCTGCAGTCGCTCACGGACGTGCCGAACGTGTT]
[+] EMBL BX617382             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGGGGCGGCTGCGCCGGGCGGGCGCTATCCCGCTGCTCGTGTCCAACACGCCCGAGTACTGTATGGCGTTCGAGTCGTACAACAACGTGACCGGGCGGACGCTCAACCCGTACGATCCGCGCCGTACGCCGGCCGGTTCGT  CCGGCGGGGAAGGTGCGCT GCTCGGCGCGGGCGCATCGGT GTGT    GGGGTGGGCAGTGATCT CGGCGGATCGATCCGCATACCGGCCCTGTTCTGTGGCATCTTCGGACACAAACCATCGGCAGGAATCGTACCCATCAAAGGGCACATGCCCGTCTGTGGCGATGCACAC TTCGACCA                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AGA285371            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CGCCAA GGATCTACCGC TGC TGC TCGAGATTA TGGC AGGGCC GAATGC AAGCCGCCTCC GCCTA GCCGAACC GGTCAAC   GTGGAC AAGGTGA A GATCTAC TA CCC CCA GAAGC TCG ACC TGACCGTGAACG CCGTCCCGATCGCGCCGGAAATTCGCGAATCCCTGCGCAGTGCGCTGAAATACTTCCAGAACAAGGGCGGCTACACGGAACCGCTCAACTTCCGCTACTTCGCCGACAGCATGCAGCTGGCCTCGACCGAGCTGCAGTCGCTCACGGACGTACCG        ]


>consensus_8452#0 CCGCTTCGATCGGTACAGTCGCGAAGTAAACAGCAGGTAGTACCCGGTAGAACCGTAACT CGGTAGAACTCGGCCAGAACACCCTGCAAAAGGAAGTGGCACCGCGTACCTGGTTCGACC TTTGCCCAACGGTTGGCGGCGACTAACGATCATTAGAATTGCAACGCTTCAATTAAAACC GTGTGTGTGCGCGAGCCGGTATTCGAGTGCATGTGTGTGTGTGTGATTGTGATCTAAGTA AATCCCAGATTTAAATTACTGTTCCGCTAGCTGGTAGGTGAACCCGTTATAGCGCAGGTA TCGTGTTCGCGTCGCGCTTAGACAATCGGCTGCAGGTGTTTTGCGCGGCTGCTGTGCAAA GCTAGCGACGCAAGTGTCGCGGTTCCCCCCCCCCCCCCCCACACAGGGACAACAGAACCT CCCCCCTTCGCTCATCAACAATCGACATCGGACGCACCTAGCACCATTGACAGTCACAAT GGAGCTGCTGCTGAAGCTGGTTGCGCTGATCCTGCGCGTGGTTAATCTCGTGCTCGAGCC AATCCTCGCCCGGCTGGCTGGTCCAGCCCGCGTCGACCCCTTTCCTGCGATACGGGACGA GCTGCTGCGGCTACCGGCAACCGAGCTGGCCGAAAGGATACGCCAGGGCAAGCTGCGCTC GGTCGAGCTGGTGCGGGCGTACGTGCTGCGCATACGCGAGGTGAACCCGCTGATCAATGC GGTCGTCGAGGAACGGTTCGAGGCGGCCCTCGGCGAGGCGGCCGAAGCGGACGAACGGGT GGCGGCGTGCGGCGGGGACGAGCAGGCAGTGAAGGAGCTGGCCCGCACCAGTCCGCTGCT CGGTGTACCGATCACCGTGAAGGAAAGCTGCTCGGTCAAGGGCCTTTCGCTGGGCGGTGG AGTGGTACGACGGCAGAACCTAACGGCGGAAGAGGACGGTGAGGCGGTGGGGCGGCTGCG CCGGGCGGGCGCTATCCCGCTGCTCGTGTCCAACACGCCCGAGTACTGTATGGCGTTCGA GTCGTACAACAACGTGACCGGGCGGACGCTCAACCCGTACGATCCGCGCCGTACGCCGGC CGGTTCGTCCGGCGGGGAAGGTGCGCTGCTCGGCGCGGGCGCATCGGTGTGTGGGGTGGG CAGTGATCTCGGCGGATCGATCCGCATACCGGCCCTGTTCTGTGGCATCTTCGGACACAA ACCATCGGCAGGAATCGTACCCATCAAAGGGCACATGCCCGTCTGTGGCGATGCACACTT CGACCAGTATCTCTCCCTCGGGCCAATGTGCCGTTACGCCAAGGATCTGCCGCTGCTGCT CGAGATTATGGCAGGGCCGAATGCAAGCCGCCTCCGCCTAGCCGAACCGGTCAACGTGGA CAAGGTGAAGATCTACTACCCGCAGAAGCTCGACCTGACCGTGAACGCCGTCCCGATTGC GCCGGAAATTCGCGAATCCCTGCGCAGTGCGCTGAAATACTTCCAGAACAAGGGCGGCTA CACGGAACCGCTCAACTTCCGCTACTTCGCCGACAGCATGCAGCTGGCCTCGACCGAGCT GCAGTCGCTCACGGACGTGCCGAACGTGTT



consensusID : consensus_8452#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 939
fasta sequence
                              [NAAATTTGTCGGAGCAGATTGGCCGANNGTATTAAACGTGACGGGCGGACGCTCAACCCGTACGATCGTGCCGTACGCCGGCCGGTTCGTCCGGCGGGGAAGGTGCGCTGCTCGGCGCGGGCGCATCGGTGTGTGGGGTGGGCAGTGATCTCGGCGGATCGATCCGAATACCGGCCCTGTTCTGTGGCATCTTCGGACACAAACCATCGGCAGGAATCGTACCCAATCAAAGGGGCACATGCCCGTTCTGTGGCCGATGCACAACTTTCGGAACCCAGTAATCTCTCCCTCGAGGGCCAAANAGTGTTGCCGGTTTACGGCCCAAAGGGATTCTTGGCCGGCCNTGCTTGACTTCGGAAGAATTTATTGGGCACGGGGNCCAGAATTGCCAAGGCCCGGCATCCCGGCCTTAGCCCGGAACCCGGGGTACAAACCGGTGGGGAACCAAAGGGTTTGACAGAATTTCTTAACGTAACGCCCGGCACAGGCAAAAGGCCTACGAAGCCTTGGCACGCCAGGTGNAAACCAGGCCCGGTACCCCGCAATTNTGGGCGGCCCCCGGGAAACACTTTCCCGCCGGAAAATTCCACTTGTCAGGCCAAGGTTGGCAGCTTGGACCNAAGTTACTTTCCCAGGAAACACAGGGGGCAGGGCTTAAACAAACGGTGAAAATCCCGGGTTTCCCAAACCTTTCCACGGGAGGTTAAAACCAGTTTTCCGAGGCNCAGGGAACACCACGGGCCACTTGGGCCAACGCTTTGGNGGACCCCTTACAGAACACCCGAGGACAGNNCATTAGGCAAAGANGTNACTGCGCGTTCCAACTGGGGAAANCGNTTTGGCCGTCGNGACAACACAGGTTGGTTTTTAGCGCCAAACGGGGAACACCGGGGGGCCCAAAAGTCTTGGAGCTTCCCTTAGGAGCGNAAGCACCTCAGC]

[+] EMBL AL696701             [NAAATTTGTCGGAGCAGATTGGCCGANNGTATTAAACGTGACGGGCGGACGCTCAACCCGTACGATCGTGCCGTACGCCGGCCGGTTCGTCCGGCGGGGAAGGTGCGCTGCTCGGCGCGGGCGCATCGGTGTGTGGGGTGGGCAGTGATCTCGGCGGATCGATCCGAATACCGGCCCTGTTCTGTGGCATCTTCGGACACAAACCATCGGCAGGAATCGTACCCAATCAAAGGGGCACATGCCCGTTCTGTGGCCGATGCACAACTTTCGGAACCCAGTAATCTCTCCCTCGAGGGCCAAANAGTGTTGCCGGTTTACGGCCCAAAGGGATTCTTGGCCGGCCNTGCTTGACTTCGGAAGAATTTATTGGGCACGGGGNCCAGAATTGCCAAGGCCCGGCATCCCGGCCTTAGCCCGGAACCCGGGGTACAAACCGGTGGGGAACCAAAGGGTTTGACAGAATTTCTTAACGTAACGCCCGGCACAGGCAAAAGGCCTACGAAGCCTTGGCACGCCAGGTGNAAACCAGGCCCGGTACCCCGCAATTNTGGGCGGCCCCCGGGAAACACTTTCCCGCCGGAAAATTCCACTTGTCAGGCCAAGGTTGGCAGCTTGGACCNAAGTTACTTTCCCAGGAAACACAGGGGGCAGGGCTTAAACAAACGGTGAAAATCCCGGGTTTCCCAAACCTTTCCACGGGAGGTTAAAACCAGTTTTCCGAGGCNCAGGGAACACCACGGGCCACTTGGGCCAACGCTTTGGNGGACCCCTTACAGAACACCCGAGGACAGNNCATTAGGCAAAGANGTNACTGCGCGTTCCAACTGGGGAAANCGNTTTGGCCGTCGNGACAACACAGGTTGGTTTTTAGCGCCAAACGGGGAACACCGGGGGGCCCAAAAGTCTTGGAGCTTCCCTTAGGAGCGNAAGCACCTCAGC]


>consensus_8452#1 NAAATTTGTCGGAGCAGATTGGCCGANNGTATTAAACGTGACGGGCGGACGCTCAACCCG TACGATCGTGCCGTACGCCGGCCGGTTCGTCCGGCGGGGAAGGTGCGCTGCTCGGCGCGG GCGCATCGGTGTGTGGGGTGGGCAGTGATCTCGGCGGATCGATCCGAATACCGGCCCTGT TCTGTGGCATCTTCGGACACAAACCATCGGCAGGAATCGTACCCAATCAAAGGGGCACAT GCCCGTTCTGTGGCCGATGCACAACTTTCGGAACCCAGTAATCTCTCCCTCGAGGGCCAA ANAGTGTTGCCGGTTTACGGCCCAAAGGGATTCTTGGCCGGCCNTGCTTGACTTCGGAAG AATTTATTGGGCACGGGGNCCAGAATTGCCAAGGCCCGGCATCCCGGCCTTAGCCCGGAA CCCGGGGTACAAACCGGTGGGGAACCAAAGGGTTTGACAGAATTTCTTAACGTAACGCCC GGCACAGGCAAAAGGCCTACGAAGCCTTGGCACGCCAGGTGNAAACCAGGCCCGGTACCC CGCAATTNTGGGCGGCCCCCGGGAAACACTTTCCCGCCGGAAAATTCCACTTGTCAGGCC AAGGTTGGCAGCTTGGACCNAAGTTACTTTCCCAGGAAACACAGGGGGCAGGGCTTAAAC AAACGGTGAAAATCCCGGGTTTCCCAAACCTTTCCACGGGAGGTTAAAACCAGTTTTCCG AGGCNCAGGGAACACCACGGGCCACTTGGGCCAACGCTTTGGNGGACCCCTTACAGAACA CCCGAGGACAGNNCATTAGGCAAAGANGTNACTGCGCGTTCCAACTGGGGAAANCGNTTT GGCCGTCGNGACAACACAGGTTGGTTTTTAGCGCCAAACGGGGAACACCGGGGGGCCCAA AAGTCTTGGAGCTTCCCTTAGGAGCGNAAGCACCTCAGC



consensusID : consensus_8452#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 334
fasta sequence
                              [CGAGGCAGAATCGGCACGATGGAGAACGGTCAACGTGGACAAGGCTGAAGATCTACTACCCGCAGAAGCTCGATCCTGACCGTGAACGCCGTCCCGATTGCGCCGGAAATTCGCGAATCCCTGCGCAGTGCGCTGAAATACTTCCAGAACAAGGGCGGCTACACGGAACCGCGTCAACTTCCGCTACTTCGCCGACAGCATGCAGCTGGCCTCGACCGAGCTGCAGTCGCTCACGGACGTGCCGAACGTGTTTGCCACGGCCGGCCAAGCCTGCATCTGGGAGCTGCTGAAGGTGACGTTCCGCCAGTCCGAGCACACAGTTCGCGACCATCTT]

[+] EMBL BX468847             [CGAGGCAGAATCGGCACGATGGAGAACGGTCAACGTGGACAAGGCTGAAGATCTACTACCCGCAGAAGCTCGATCCTGACCGTGAACGCCGTCCCGATTGCGCCGGAAATTCGCGAATCCCTGCGCAGTGCGCTGAAATACTTCCAGAACAAGGGCGGCTACACGGAACCGCGTCAACTTCCGCTACTTCGCCGACAGCATGCAGCTGGCCTCGACCGAGCTGCAGTCGCTCACGGACGTGCCGAACGTGTTTGCCACGGCCGGCCAAGCCTGCATCTGGGAGCTGCTGAAGGTGACGTTCCGCCAGTCCGAGCACACAGTTCGCGACCATCTT]


>consensus_8452#2 CGAGGCAGAATCGGCACGATGGAGAACGGTCAACGTGGACAAGGCTGAAGATCTACTACC CGCAGAAGCTCGATCCTGACCGTGAACGCCGTCCCGATTGCGCCGGAAATTCGCGAATCC CTGCGCAGTGCGCTGAAATACTTCCAGAACAAGGGCGGCTACACGGAACCGCGTCAACTT CCGCTACTTCGCCGACAGCATGCAGCTGGCCTCGACCGAGCTGCAGTCGCTCACGGACGT GCCGAACGTGTTTGCCACGGCCGGCCAAGCCTGCATCTGGGAGCTGCTGAAGGTGACGTT CCGCCAGTCCGAGCACACAGTTCGCGACCATCTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8452#0      CCGCTTCGATCGGTACAGTCGCGAAGTAAACAGCAGGTAGTACCCGGTAGAACCGTAACT 60
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      ------------------------------------------------------------
                                                                                  

consensus_8452#0      CGGTAGAACTCGGCCAGAACACCCTGCAAAAGGAAGTGGCACCGCGTACCTGGTTCGACC 120
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      ------------------------------------------------------------
                                                                                  

consensus_8452#0      TTTGCCCAACGGTTGGCGGCGACTAACGATCATTAGAATTGCAACGCTTCAATTAAAACC 180
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      ------------------------------------------------------------
                                                                                  

consensus_8452#0      GTGTGTGTGCGCGAGCCGGTATTCGAGTGCATGTGTGTGTGTGTGATTGTGATCTAAGTA 240
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      ------------------------------------------------------------
                                                                                  

consensus_8452#0      AATCCCAGATTTAAATTACTGTTCCGCTAGCTGGTAGGTGAACCCGTTATAGCGCAGGTA 300
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      ------------------------------------------------------------
                                                                                  

consensus_8452#0      TCGTGTTCGCGTCGCGCTTAGACAATCGGCTGCAGGTGTTTTGCGCGGCTGCTGTGCAAA 360
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      ------------------------------------------------------------
                                                                                  

consensus_8452#0      GCTAGCGACGCAAGTGTCGCGGTTCCCCCCCCCCCCCCCCACACAGGGACAACAGAACCT 420
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      ------------------------------------------------------------
                                                                                  

consensus_8452#0      CCCCCCTTCGCTCATCAACAATCGACATCGGACGCACCTAGCACCATTGACAGTCACAAT 480
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      ------------------------------------------------------------
                                                                                  

consensus_8452#0      GGAGCTGCTGCTGAAGCTGGTTGCGCTGATCCTGCGCGTGGTTAATCTCGTGCTCGAGCC 540
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      ------------------------------------------------------------
                                                                                  

consensus_8452#0      AATCCTCGCCCGGCTGGCTGGTCCAGCCCGCGTCGACCCCTTTCCTGCGATACGGGACGA 600
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      ------------------------------------------------------------
                                                                                  

consensus_8452#0      GCTGCTGCGGCTACCGGCAACCGAGCTGGCCGAAAGGATACGCCAGGGCAAGCTGCGCTC 660
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      ------------------------------------------------------------
                                                                                  

consensus_8452#0      GGTCGAGCTGGTGCGGGCGTACGTGCTGCGCATACGCGAGGTGAACCCGCTGATCAATGC 720
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      ---NAAATTTGTCGGAGCAGATTGGCCGANNGTATTAAACGTGA--CGGGCGGACGCTCA 55
                                                                                  

consensus_8452#0      GGTCGTCGAGGAACGGTTCGAGGCGGCCC-TCGGCGAGGCGGCCGAAGCGGACGAACGGG 779
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      ACCCGTACGATCGTGCCGTACGCCGGCCGGTTCGTCCGGCGGGGAAGGTGCGCTGCTCGG 115
                                                                                  

consensus_8452#0      TGGCGGCGTGCGGCGGGGACGAGCAGGCAGTGAAGGAGCTGGCCCGCACCAGTCCGCTGC 839
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      CGCGGGCGCATCGGTGTGTGGGGTGGGCAGTGATCTCGGCGGATCGATCCGAATACCGGC 175
                                                                                  

consensus_8452#0      TCGGTGTACCGATCACCGTGAAGGAAAGCTGCTCGGTCAAGGGCCTTTCGCTGGGCGGTG 899
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      CCTGTTCTGTGGCATCTTCGGACACAAACCATCGGCAGGAATCGTACCCAATCAAAGGGG 235
                                                                                  

consensus_8452#0      GAGTGGTACGACGGCAGAACCTAACGGCGGAAGAGGACGGTGAGGCGGTGGGGCGGCTGC 959
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      CACATGCCCG---------TTCTGTGGCCGATGCACAACTTTCGGAACCCAGTAATCTCT 286
                                                                                  

consensus_8452#0      GCCGGGCGGGCGCTATCCCGCTGCTCGTGTCCAACACGCCCGAGTACTGTATGGCGTTCG 1019
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      CCCTCGAGGGCCAAANAGTGTTGCCGGTTTACGGCCCAA--AGGGATTCTTGGCCGGCCN 344
                                                                                  

consensus_8452#0      AGTCGTACAACAACGTGACCGGGCGGACGCTCAACCCGTACGATCCGCGCCGTACGCCGG 1079
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      TGCTTGACTTCGGAAGAATTTATTGGGCACGGGGNCC--AGAATTGCCAAGGCCCGGCAT 402
                                                                                  

consensus_8452#0      CCGGTTCGTCCGGCGGGGAAGGTGCGCTGCTCGGCGCGGGCGCATCGGTGTGTGGGGTGG 1139
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      CCCGGCC--TTAGCCCGGAACCCGGGGTACAAACCGGTGGGGAACCAAAGGGTTTGACAG 460
                                                                                  

consensus_8452#0      GCAGTGATCTCGGCGGATCGATCCGCATACCGGCCCTGTTCTGTGGCATCTTCGGACACA 1199
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      AAT---TTCTTAACGTAACGCCCGGCACAG-GCAAAAGGCCTACGAAGCCTTGGCACGCC 516
                                                                                  

consensus_8452#0      AACCATCGGCAGGAATCGTACCCATCAAAGGGCACATGCCCGTCTGTGGCGATGCACACT 1259
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      AGGTGNAAACCAGGCCCGGTACCCCGCAATTNTGGGCGGCCCCCGGGAAACACTTTCCCG 576
                                                                                  

consensus_8452#0      TCGACCAGTATCTCTCCCTCGGGCCAATGTGCCGTTACGCCAAGGATCTGCCGCTGCTGC 1319
consensus_8452#2      ------------------------------------------------------------
consensus_8452#1      CCGGAAAAT-TCCACTTGTCAGGCCAAGGT----TGGCAGCTTGGACCNAAGTTACTTTC 631
                                                                                  

consensus_8452#0      TCGAGATTATGGCAGGGCCGAATGCAAGCCGCCTCCGCCTAGCCGA-ACCGGTCAACGTG 1378
consensus_8452#2      -----------------------CGAGGCAGAATCGGCACGATGGAGAACGGTCAACGTG 37
consensus_8452#1      CCAGGAAACACAGGGGGCAGGGCTTAAACAAACGGTGAAAATCCCGGGTTTCCCAAACCT 691
                                               *  *       *                ***    

consensus_8452#0      GACAAGG-TGAAGATCTACTACCCGCAGAAGCTCGA-CCTGACCGTGAACGCCGTCCCGA 1436
consensus_8452#2      GACAAGGCTGAAGATCTACTACCCGCAGAAGCTCGATCCTGACCGTGAACGCCGTCCCGA 97
consensus_8452#1      TTCCACG--GGAGGT-TAAAACC---AGTTTTCCGAGGCNCAGGGAACACCACGGGCCAC 745
                        * * *  * ** * **  ***   **     ***  *  *  *   **  **  **  

consensus_8452#0      TTGCGCCGGAAATTCGCGAATCCCTGCGCAGTGCGCTGAAA-----TACTTCCAGAACAA 1491
consensus_8452#2      TTGCGCCGGAAATTCGCGAATCCCTGCGCAGTGCGCTGAAA-----TACTTCCAGAACAA 152
consensus_8452#1      TTGGGCCAACGCTTTGGNGGACCCCTTACAGAACACCCGAGGACAGNNCATTAGGCAAAG 805
                      *** ***     ** *     ***    ***  * *   *        * *   * * * 

consensus_8452#0      GGGCGGCTACACGG---AACCGC-TCAACTTCCGCTACTTCGCCGACAGCATGCAGCTGG 1547
consensus_8452#2      GGGCGGCTACACGG---AACCGCGTCAACTTCCGCTACTTCGCCGACAGCATGCAGCTGG 209
consensus_8452#1      ANGTNACTGCGCGTTCCAACTGGGGAAANCGNTTTGGCCGTCGNGACAACACA-GGTTGG 864
                        *   ** * **    *** *    **         *      **** **    * ***

consensus_8452#0      CCTCGACCGAGCTGCAGTCGCTCACGGACGTGCCGAACGTGTT----------------- 1590
consensus_8452#2      CCTCGACCGAGCTGCAGTCGCTCACGGACGTGCCGAACGTGTTTGCCACGGCCGGCCAAG 269
consensus_8452#1      TTTTTAGCGCCAAACGGGGAACACCGGGGGGCCCAAAAGTCTTGGAGCTTCCCTTAGGAG 924
                        *  * **     * *       ***  *  ** ** ** **                 

consensus_8452#0      ------------------------------------------------------------
consensus_8452#2      CCTGCATCTGGGAGCTGCTGAAGGTGACGTTCCGCCAGTCCGAGCACACAGTTCGCGACC 329
consensus_8452#1      CGNAAGCACCTCAGC--------------------------------------------- 939
                                                                                  

consensus_8452#0      -----
consensus_8452#2      ATCTT 334
consensus_8452#1      -----
                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)