Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8474 cluster # 8474       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8474#0 length = 1398 sequences # 9  
consensus_8474#1 length = 1153 sequences # 1  

consensusID : consensus_8474#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1398
fasta sequence
                              [GACATATTGCATTAAACGATTGTAGAAAGGAGACCGTTGCGCACATTCGGTTAATAATTCTCGTTAATACGCGTACACTGAAAAGAAAATTGGAGAGAGGAGAGAGATGTTGTACAACTGATCTGATCGTATGCTCTGATGTATTTGATGCGCTTATAACATTACACCACACACACATGCTACAAGAATAATTCGTTGCAAGTAAATCTCGAAAACAAGTGGTAGTTGAAGGCGGCCAACGTTTGGAATTAATTTGCGCGTTCAAATTCCTAAAAATATAACGAAAATGACATCAGAATGTGTGTTACGTAAATAAGCAGGAAATGATTCTTGTCGTTTTACAACAAGAGTTCGACTGTAACCTTACATACAACTAGAATTTCCCCATTTGCATGGGTATGAGTGACGAAAGACTGAAAAGAAGTGATTTGTTTGTGGAAGAAACGGTACGAAATTGGAAAAGATTCATCCTAAAACTAAAAATTGCGCTCCATTCCAGTACAGCAACAATGCACACACACACACAAACGCATTCCAATGCACCGTTTAAGTGTTACGATCTGAATAGTTAATTTTCAACATATTAGTTCCTGCTATTTTGTGATTATTCCTTGAACCGAATCAACGTTGTACGAGGAGACAGACCCCGATGTCTCTTGTTTACCCCACACGATCGGTCACATCGTAATAGGGATATTTTCTTTTAATCCATTTCATTTGACACCTCATCGGGATGGCCGTGCTGTGGTGAGCAAAAATGCGAATAACTAGCTACTAGTACGCAATTTTGCAAC-AGGTTGATCAAACTCAATTTGACCTACACAGCACAGTTAGTATTTGAGGCAAAAGATCTGATTTTTATGATGCATTGATGTGAGGTAG--TCATATCGATCGGTTATGCTCTTACGGAACATTCAACTAAGTGTGTGATTTAATTGAATCAGGAAAATTATGATGCAGAACAGATGATAACGCTTCACGAACTCACGTGTGTTCGTGAAACATACGAAACCACTAGGAACAAAAAGAAGAATAAAAAAGGAACAACAATGATAAAACATACATATGTTCGTGTTACAGTTGAATGCGATGAACTTGAATGAGGTGCGAGTGAGTGTTTAGTATTAACAAAATAAAATCAAGCATGTAAAGCTTAACACACACATACAAACACACACTCGATGTCTAATACGAGATATAGAACAACAGAGATGAGGTTGAAGGATTCGTACGTGCTATTGATGCAAAAGGCACATGACAAGACATGAAGTTATGGGAAAATAAACTACTCGATCATATTTTAAAGTTCCACTCACCACGGAAACGAAAAACTCGCAACGCATTTTATCAGAACATAATTATTTGAATTAAAGAAATTTTCAACGAATCTAAAAAAAA]

[+] EMBL CNS08Z5G             [GACATATTGCATTAAACGATTGTAGAAAGGAGACCGTTGCGCACATTCGGTTAATAATTCTCGTTAATACGCGTACACTGAAAAGAAAATTGGAGAGAGGAGAGAGATGTTGTACAACTGATCTGATCGTATGCTCTGATGTATTTGATGCGCTTATAACATTACACCACACACACATGCTACAAGAATAATTCGTTGCAAGTAAATCTCGAAAACAAGTGGTAGTTGAAGGCGGCCAACGTTTGGAATTAATTTGCGCGTTCAAATTCCTAAAAATATAACGAAAATGACATCAGAATGTGTGTTACGTAAATAAGCAGGAAATGATTCTTGTCGTTTTACAACAAGAGTTCGACTGTAACCTTACATACAACTAGAATTTCCCCATTTGCATGGGTATGAGTGACGAAAGACTGAAAAGAAGTGATTTGTTTGTGGAAGAAACGGTACGAAATTGGAAAAGATTCATCCTAAAACTAAAAATTGCGCTCCATTCCAGTACAGCAACAATGCACACACATACAC  ACGCATTCCAATGCACCGTTTAAGTGTTACGATCTGAATAGTTAATTTTCAACATATTAGTTCCTGCTATTTTGTGATTATTCCTTGAACCGAATCAACGTTATGCGAGGAGACAGACCCCGATGTCTCTTGTTTACCCCACACGATCGGTCACATCGTAATAGGGATATTTTCTTTTAATCCATTTCATTTGACCCCTCATCGGGATGGCCGTGCTGTGGTGAGCAAAAATGCGATTAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX627981             [                                                                                                                                                                                                                                     AGGCGGCCAACGTTTGGAATTAATTTGCGCGTTCAAATTCCTAAAAATATAACGAAAATGACATCAGAATGTGTGTTACGTAAATAAGCAGTAAATAATTCTTGTCGTTTTACAACAAGAGTTCGACTGTAACCTTACATAAAACTAGAATTTCCCCATTTGCATGGGTATGAGTGACGAAAGACTGAAAAGAAGTGATTTGTTTGT GAAGAAACGGTACGAAATTGGAAAAGATTCATCCTAAAACTAAAAATTGCGCTCCATTCCAGTACAGCAACAATGCACACACACACACAAACGCATTCCAATGCACCGTTTAAGTGTTACGATCTGAATAGTTAATTTTTAACATATTAGTTCCTGCTATTTTGTGATTATTCCTTGAACCGAATCAAC   GTACGAGGAGACAGACCCCGATGTCTCTTGTTTACCCCACACGATCGGTCACATCGTAATAGGGATATTTTCTTTTAATTCATTTCTTTTGACACATCATCGGGATGGCCGTGCTGTGGTGAGCAAAAATGCGAATAACTAGGTACTAGTACGCAATTTTGCAACAAGGTTGATCAAACTCAATTTGACCTACACAGCATAGTTAGTATTTGAGGCAAAAGATCTGATTTTTATGATGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX626208             [                                                                                                                                                                                                                                                                                                                                                      AACAAGAGTTCCACTGTAACCTTACATACAACTAGAATCTCCCCATTTGCATGGGTATGAGTGACGAAAGACTGAAAAGAAGTGATTTGTTTGTGGAAGAAACGGTACGAAATTGGAAAAGATTCATCCTAAAACTAAAAATTGCGCTCCATTCCAGTACAGCAACAATGCACACACACACACAAACGCATTCCAATGCACCGTTTAAGTATTACGATCTGAATAGTTAATTTTCAACATATTAGTTCCTGCTATTTTGTGATTATTCCTTGAACCGAATCAACGTTGTACGAGGAGACAGACCCCGATGTCTCTTGTACACACCACACGATCGGTCACATCGTAATAGGGATATTTTCTTTTAATTCATTTCATTTGACACCTCATCGGGATGGCCGTGCTGTGGTGAGCAAAAATGCGAATAACTAGCTACTAGTACGCAATTTTGCAAC AGGTTGATCTAACTCAAATTGACCAACACAGCACAGTTAGTATTTGAGGCAAAAGATCTGATTTTTATGATGCATTGATGTGAGGTAG  TCATATCGATCGGTTATGCTCTTACGGAACATTCAACTAAGTATGTGATTTAATTGAATCANGAAAATTATGATGCAGAACAGATGATAACGCTTCACGAACTCACGTGTGTTCGTGAAACATACGAAACC                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX612391             [                                                                                                                                                                                                                                                                                                                                                                                 ACAACTAGAATCTCACAATTTGCAGGGGTATGAGTGACGAAAGACTGAAAAGAAGTGATTTGTTTGTGGAAGAAACGGTACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX626275             [                                                                                                                                                                                                                                                                                                                                                                                                 CATTTGCATGNGTNTGAGTGACGAAAGACTGAAAAGAAGTGATTTGTTTGTGGAAGAAACGGTACGAAATTGGAAAAGATTCATCCTAAAACTAAAAATTGCGCTCCATTCCAGTACAGCCACAATGCACACACACACACAAACGCATTCCAATGCACCGTTTAAGTGTTACGATCTGAATAGTTAATTTTCAACATATTAGTTCCTGCTATTTTGTGATTATTCCTTGAACCGAATCAACGTTGTACGAGGAGACAGACCCCGATGTCTCTTGTACACACCACACGATCGGTCACATCGTAATAGGGATATTTTCTTTTAATCCATTTCATTTGACACCTCATCGGGATGGTCGTGCTGTAGTGAGCAAAAATGCGAATAACTAGCTACTAGTACGCAATTTTGCAAC AGGTTGATCAAACTCAATTTGACCTACACAGCACAGTTAGTATTTGAGGCAAAAGATCTGATTTTTATGATGCATTGATGTGAGGTAG  TCATATCGATCGGTTATGCTCTTACGGAACTTTCAACTAAGTGTGTGATTTAATTGAATCAGGAAAATTATGATGCAGAACAGATGATAACGCTTCACGAA                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS08Z5H             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TATTTTGTGATTATTCCTTGAACCGAATCAACGTTATGCGAGGAGACAGACCCCGATGTCTCTTGTTTACCCCACACGATCGGTCACATCGTAATAGGGATATTTTCTTTTAATCCATTTCATTTGACCCCTCATCGGGATGGCCGTGCTGTGGTGAGCAAAAATGCGAATAACTAGCTACTAGTACGCAATTTTGCAAC AGGTTGATCAAACTCAATTTGACCTACACAGCATAGTTAGTATTTGAGGCAAAAGATCTGATTTTTATGATGCATTGATGTGAGGTAGTCTCATATCGATCGGTTATGCTCTTACGGAACATTCAACTAAGTGTGTGATTTAATTGAATCAGGAAAATTATGATGCAAATCAGATGATAACGCTACACGAACTCACGTGTGTTCGTGAAACATACGAAACCACTAGGAACAAAATGAAGAATAAAAAAGGGACAACAATGATAAAACATACATATGTTCGTGTTACAGTTGAATGCGATGAACTTGAATGAGGTGCGAGTGAGTGTTTAGTATTAACAAAATAAAATCAAGCATGTAAAGCTTAACACACACATCCAAAAACACACTCGATGTCTAATACGAGATATAGAACAACAGAGATGAGGTTGAAGGATTCGTACGTGCTATTGATGC AAAGGCCCATGACAAGACATGAAGTTATGGGAAAATAAACTACTCGATCATATTTTAAA TTCCACTCACCACGGAA                                                                           ]
[+] EMBL AGA282414            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCTTGAACCGAATCAACGTTGTACGAGGAGACAGACCCCGATGTCTCTTGTACACACCACACGATCGGTCACATCGTAATAGGGATATTTTCTTTTAATTCATTTCATTTGACACCTCATCGGGATGGCCGTGCTGTGGTGAGCAAAAATGCGAATAACTAGCTACTAGTACGCAATTTTGCAAC AGGTTGATCTAACTCAAATTGACCAACACAGCACAGTTAGTATTTGAGGCAAAAGATCTGATTTTTATGATGCATTGATGTGAGGTAG  TCATATCGATCGGTTATGCTCTTACGGAACATTCAACTAAGTATGTGATTTAATTGAATCAGGAAAATTATGATGCAGAACAGATGATAACGCTTCACGAACTCACGTGTGTTCGTGAAACATACGAAACCACTAGGAACAAAAAGAAGAATAAAAAAGGAACAACAATGATAAAACATAC  ATGTTCGTGTTACAGTTGAAT                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM656254             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ccgG  TCATATCGATCGGTTATGCTCTTACGGAACTTTCAACTAAGTGTGTGATTTAATTGAATCAGGAAAATTATGATGCAGAACAGATGATAACGCTTCACGAACTCACGT TGTTCGCGAAACATACGAAACCACTAGGAACAAAAAGAAGAATAAAAAAGGAACAACAATGATAAAACATACATATGTTCGTGTTACAGTTGAATGCGATGAACTTGAATGAGGTGCGAGTGAGTGTTTAGTATTAACAAAATAAAATCAAGCATGTAAAGCTTAACACACACATACAAACACACACTCGATGTCTAATACGAGATATAGAACAACAGAGATGAGGTTGAAGGATTCGTACGTGCTATTGATGCAAAAGGCACATGACAAGACATGAAGTTATGGGAAAATAAACTACTCGATCATATTTTAAAGTTCCACTCACCACGGAAACGAAAAACTCGC                                                              ]
[-] EMBL AGA280790            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGAATCAGGAAAATTATGATGCAGAACAGATGATAACGCTTCACGAACTCACGTGTGTTCGTGAAACATACGAAACCACTAGGAACAAAAAGAAGAATAAAAAAGGAACAACAATGATAAAACATAC  ATGTTCGTGTTACAGTTGAATGCGATGAACTTGAATGAGGTGCGAGTGAGTGTTTAGTATTAACAAAATAAAATCAAGCATGTAAAGCTTAACACACACATACAAACACACACTCGATGTCTAATACGAGATATAGAACAACAGAGATGAAGTTGAAGGATTCGTACGTGCTATTGATGCAAAAGGCACATGACAAGACATGAAGTTATGGGAAAATAAACTACTCGATCATATTTTAAAGTTCCACTCACCACGGAAACGAAAAACTCGCAACGCATTTTATCAGAACATAATTATTTGAATTAAAGAAATTTTCAACGAATCTAAAAAAAA]


>consensus_8474#0 GACATATTGCATTAAACGATTGTAGAAAGGAGACCGTTGCGCACATTCGGTTAATAATTC TCGTTAATACGCGTACACTGAAAAGAAAATTGGAGAGAGGAGAGAGATGTTGTACAACTG ATCTGATCGTATGCTCTGATGTATTTGATGCGCTTATAACATTACACCACACACACATGC TACAAGAATAATTCGTTGCAAGTAAATCTCGAAAACAAGTGGTAGTTGAAGGCGGCCAAC GTTTGGAATTAATTTGCGCGTTCAAATTCCTAAAAATATAACGAAAATGACATCAGAATG TGTGTTACGTAAATAAGCAGGAAATGATTCTTGTCGTTTTACAACAAGAGTTCGACTGTA ACCTTACATACAACTAGAATTTCCCCATTTGCATGGGTATGAGTGACGAAAGACTGAAAA GAAGTGATTTGTTTGTGGAAGAAACGGTACGAAATTGGAAAAGATTCATCCTAAAACTAA AAATTGCGCTCCATTCCAGTACAGCAACAATGCACACACACACACAAACGCATTCCAATG CACCGTTTAAGTGTTACGATCTGAATAGTTAATTTTCAACATATTAGTTCCTGCTATTTT GTGATTATTCCTTGAACCGAATCAACGTTGTACGAGGAGACAGACCCCGATGTCTCTTGT TTACCCCACACGATCGGTCACATCGTAATAGGGATATTTTCTTTTAATCCATTTCATTTG ACACCTCATCGGGATGGCCGTGCTGTGGTGAGCAAAAATGCGAATAACTAGCTACTAGTA CGCAATTTTGCAACAGGTTGATCAAACTCAATTTGACCTACACAGCACAGTTAGTATTTG AGGCAAAAGATCTGATTTTTATGATGCATTGATGTGAGGTAGTCATATCGATCGGTTATG CTCTTACGGAACATTCAACTAAGTGTGTGATTTAATTGAATCAGGAAAATTATGATGCAG AACAGATGATAACGCTTCACGAACTCACGTGTGTTCGTGAAACATACGAAACCACTAGGA ACAAAAAGAAGAATAAAAAAGGAACAACAATGATAAAACATACATATGTTCGTGTTACAG TTGAATGCGATGAACTTGAATGAGGTGCGAGTGAGTGTTTAGTATTAACAAAATAAAATC AAGCATGTAAAGCTTAACACACACATACAAACACACACTCGATGTCTAATACGAGATATA GAACAACAGAGATGAGGTTGAAGGATTCGTACGTGCTATTGATGCAAAAGGCACATGACA AGACATGAAGTTATGGGAAAATAAACTACTCGATCATATTTTAAAGTTCCACTCACCACG GAAACGAAAAACTCGCAACGCATTTTATCAGAACATAATTATTTGAATTAAAGAAATTTT CAACGAATCTAAAAAAAA



consensusID : consensus_8474#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1153
fasta sequence
                              [CGGTTAAAATATTCTTGTCGTTTTACACAAGAGTTCGACTGTAACCTTACATACAACTAGAATCTCCCCATTTGCATGGGTATGAGTGACGAAAGACTGAAAAGAAGTGATTTGTTTGTGGAAGAAAGGTACGAAATTGGAAAAGATTCATCCTAAAACTAAAAATTGCGCTCCATATCCAGTACAGCCAAACAATAGCACACACACACACAAACGCATATCCAATGCACCGTATATAACGTATTACGATACTCGANNTAGTNANNTTTTCCAACATATNAGTTCCTGCATAATACTCGTCGANTTATTCCTTTGAACCGAATCAACCGTTNGTNACGNAGGGGACGACCAAGAAGCCCCCGNATAGGTACTTCTTGTTGTAAAAACAACCCAACAACGGNATACGGGNTCACCACAATTCCGGTCAACTTAANGGGGATATAAACCTTTACTCAACTCACACCATTCTCNCCNATACCNTGGCAACAACACTTACATACGGCANTAGCGCACGGATTAGACTTGGTGNCNTTGCNNTGCCANAANAACAATTGGCCGGCAACTTTAANCCGCTNAGCGCCTAACCATAAGGTTAACACAGCCCAAACNTAGNCTATGGGCCAAGCCCACNGAGGNTACTGGACGTTCCTAAACACCTCCAACACNAGTTTAGGNACCCCAAAAGCGACCAAGCGCAACCCGCGTANAACGGTCNACTGCTNCGACCNGNGGACNCAACGNGCAAGTCCTTGGANAGTATCTCNAAGTGGACTAGNCATCNTGCACTGGTTGCACGGGCATACAGANCCACTTANATCCAGGNAAGTCCCGGCGGACTAAGGCNTCCATAGNCCGGGGNNAACNAANTTTACCAANANNGTAAACGGCTACTTGGNTGCACTGNTTACACTTTAGGCAAGTTCCCAGGTGGANACTACATATTCTTNGNNNTATGGCCAAGAAACACAANGAAACTGNNCAATNAACCGGCATTTCAGCACGANCACANCCAACCGGGCTGCATGGTACCGCGTAGGACAACAACANTNNCGGAAAGNGCCACGTAAGGGGGAAACAAAAAAAAGCANANACAGANACGANCNAGNNCCGGGCCAGTTCGTGNNNCGGCGCGGNGNAGGCATACANTCTCCCG]

[+] EMBL AL695216             [CGGTTAAAATATTCTTGTCGTTTTACACAAGAGTTCGACTGTAACCTTACATACAACTAGAATCTCCCCATTTGCATGGGTATGAGTGACGAAAGACTGAAAAGAAGTGATTTGTTTGTGGAAGAAAGGTACGAAATTGGAAAAGATTCATCCTAAAACTAAAAATTGCGCTCCATATCCAGTACAGCCAAACAATAGCACACACACACACAAACGCATATCCAATGCACCGTATATAACGTATTACGATACTCGANNTAGTNANNTTTTCCAACATATNAGTTCCTGCATAATACTCGTCGANTTATTCCTTTGAACCGAATCAACCGTTNGTNACGNAGGGGACGACCAAGAAGCCCCCGNATAGGTACTTCTTGTTGTAAAAACAACCCAACAACGGNATACGGGNTCACCACAATTCCGGTCAACTTAANGGGGATATAAACCTTTACTCAACTCACACCATTCTCNCCNATACCNTGGCAACAACACTTACATACGGCANTAGCGCACGGATTAGACTTGGTGNCNTTGCNNTGCCANAANAACAATTGGCCGGCAACTTTAANCCGCTNAGCGCCTAACCATAAGGTTAACACAGCCCAAACNTAGNCTATGGGCCAAGCCCACNGAGGNTACTGGACGTTCCTAAACACCTCCAACACNAGTTTAGGNACCCCAAAAGCGACCAAGCGCAACCCGCGTANAACGGTCNACTGCTNCGACCNGNGGACNCAACGNGCAAGTCCTTGGANAGTATCTCNAAGTGGACTAGNCATCNTGCACTGGTTGCACGGGCATACAGANCCACTTANATCCAGGNAAGTCCCGGCGGACTAAGGCNTCCATAGNCCGGGGNNAACNAANTTTACCAANANNGTAAACGGCTACTTGGNTGCACTGNTTACACTTTAGGCAAGTTCCCAGGTGGANACTACATATTCTTNGNNNTATGGCCAAGAAACACAANGAAACTGNNCAATNAACCGGCATTTCAGCACGANCACANCCAACCGGGCTGCATGGTACCGCGTAGGACAACAACANTNNCGGAAAGNGCCACGTAAGGGGGAAACAAAAAAAAGCANANACAGANACGANCNAGNNCCGGGCCAGTTCGTGNNNCGGCGCGGNGNAGGCATACANTCTCCCG]


>consensus_8474#1 CGGTTAAAATATTCTTGTCGTTTTACACAAGAGTTCGACTGTAACCTTACATACAACTAG AATCTCCCCATTTGCATGGGTATGAGTGACGAAAGACTGAAAAGAAGTGATTTGTTTGTG GAAGAAAGGTACGAAATTGGAAAAGATTCATCCTAAAACTAAAAATTGCGCTCCATATCC AGTACAGCCAAACAATAGCACACACACACACAAACGCATATCCAATGCACCGTATATAAC GTATTACGATACTCGANNTAGTNANNTTTTCCAACATATNAGTTCCTGCATAATACTCGT CGANTTATTCCTTTGAACCGAATCAACCGTTNGTNACGNAGGGGACGACCAAGAAGCCCC CGNATAGGTACTTCTTGTTGTAAAAACAACCCAACAACGGNATACGGGNTCACCACAATT CCGGTCAACTTAANGGGGATATAAACCTTTACTCAACTCACACCATTCTCNCCNATACCN TGGCAACAACACTTACATACGGCANTAGCGCACGGATTAGACTTGGTGNCNTTGCNNTGC CANAANAACAATTGGCCGGCAACTTTAANCCGCTNAGCGCCTAACCATAAGGTTAACACA GCCCAAACNTAGNCTATGGGCCAAGCCCACNGAGGNTACTGGACGTTCCTAAACACCTCC AACACNAGTTTAGGNACCCCAAAAGCGACCAAGCGCAACCCGCGTANAACGGTCNACTGC TNCGACCNGNGGACNCAACGNGCAAGTCCTTGGANAGTATCTCNAAGTGGACTAGNCATC NTGCACTGGTTGCACGGGCATACAGANCCACTTANATCCAGGNAAGTCCCGGCGGACTAA GGCNTCCATAGNCCGGGGNNAACNAANTTTACCAANANNGTAAACGGCTACTTGGNTGCA CTGNTTACACTTTAGGCAAGTTCCCAGGTGGANACTACATATTCTTNGNNNTATGGCCAA GAAACACAANGAAACTGNNCAATNAACCGGCATTTCAGCACGANCACANCCAACCGGGCT GCATGGTACCGCGTAGGACAACAACANTNNCGGAAAGNGCCACGTAAGGGGGAAACAAAA AAAAGCANANACAGANACGANCNAGNNCCGGGCCAGTTCGTGNNNCGGCGCGGNGNAGGC ATACANTCTCCCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8474#0      GACATATTGCATTAAACGATTGTAGAAAGGAGACCGTTGCGCACATTCGGTTAATAATTC 60
consensus_8474#1      ------------------------------------------------------------
                                                                                  

consensus_8474#0      TCGTTAATACGCGTACACTGAAAAGAAAATTGGAGAGAGGAGAGAGATGTTGTACAACTG 120
consensus_8474#1      ------------------------------------------------------------
                                                                                  

consensus_8474#0      ATCTGATCGTATGCTCTGATGTATTTGATGCGCTTATAACATTACACCACACACACATGC 180
consensus_8474#1      ------------------------------------------------------------
                                                                                  

consensus_8474#0      TACAAGAATAATTCGTTGCAAGTAAATCTCGAAAACAAGTGGTAGTTGAAGGCGGCCAAC 240
consensus_8474#1      ------------------------------------------------------------
                                                                                  

consensus_8474#0      GTTTGGAATTAATTTGCGCGTTCAAATTCCTAAAAATATAACGAAAATGACATCAGAATG 300
consensus_8474#1      ------------------------------------------------------------
                                                                                  

consensus_8474#0      TGTGTTACGTAAATAAGCAGG-AAATGATTCTTGTCGTTTTACAACAAGAGTTCGACTGT 359
consensus_8474#1      -----------------CGGTTAAAATATTCTTGTCGTTTTACA-CAAGAGTTCGACTGT 42
                                       * *  ***  ***************** ***************

consensus_8474#0      AACCTTACATACAACTAGAATTTCCCCATTTGCATGGGTATGAGTGACGAAAGACTGAAA 419
consensus_8474#1      AACCTTACATACAACTAGAATCTCCCCATTTGCATGGGTATGAGTGACGAAAGACTGAAA 102
                      ********************* **************************************

consensus_8474#0      AGAAGTGATTTGTTTGTGGAAGAAACGGTACGAAATTGGAAAAGATTCATCCTAAAACTA 479
consensus_8474#1      AGAAGTGATTTGTTTGTGGAAGAAA-GGTACGAAATTGGAAAAGATTCATCCTAAAACTA 161
                      ************************* **********************************

consensus_8474#0      AAAATTGCGCTCCAT-TCCAGTACAGC--AACAAT-GCACACACACACACAAACGCAT-T 534
consensus_8474#1      AAAATTGCGCTCCATATCCAGTACAGCCAAACAATAGCACACACACACACAAACGCATAT 221
                      *************** ***********  ****** ********************** *

consensus_8474#0      CCAATGCACCGTTTAA---GTGTTACGAT---CTGAATAGTTAATTTT--CAACATATTA 586
consensus_8474#1      CCAATGCACCGTATATAACGTATTACGATACTCGANNTAGTNANNTTTTCCAACATATNA 281
                      ************ **    ** *******   *    **** *  ***  ******** *

consensus_8474#0      GTTCCTGC----TATTTTGTGATT-ATTCCTT-GAACCGAATCAAC-GTTG--TACGAGG 637
consensus_8474#1      GTTCCTGCATAATACTCGTCGANTTATTCCTTTGAACCGAATCAACCGTTNGTNACGNAG 341
                      ********    ** *    ** * ******* ************* ***    ***  *

consensus_8474#0      AGACAGACCCCGATGTCTCTTGTT---TACCCCACACGATCGGTCACATCGTAATAGGGA 694
consensus_8474#1      GGGACGACCAAGAAGCCCCCGNATAGGTACTTCTTGTTGTAAAA-ACAACCCAACAACGG 400
                       *   ****  ** * * *    *   ***  *      *     *** *  ** *  * 

consensus_8474#0      TATTTTCTTTTAATCCATTTCATTTGACACCTCATCGGGATG---GCCGTGCTGTGGTGA 751
consensus_8474#1      NATACGGGNTCACCACAATTCCGGTCA-ACTTAANGGGGATATAAACCTTTACTCAACTC 459
                       **      * *   ** ***   * * ** * *  *****     ** *          

consensus_8474#0      GCAAAAAT---GCGAATAACTAGCTACTAGTACGCA-ATTTTGCAACAG---GTTGATCA 804
consensus_8474#1      ACACCATTCTCNCCNATACCNTGGCAACAACACTTACATACGGCANTAGCGCACGGATTA 519
                       **  * *    *  *** *  *  *  *  **  * **   ***  **      *** *

consensus_8474#0      AACTCAATTTGACCTACACAGCACAGTTAGTATTTGAGGCAAAAGATCTGATTTTTATGA 864
consensus_8474#1      GACTTGGTGNCNTTGCNNTGCCANAANAACAATT--GGCCGGCAACTTTAANCCGCTNAG 577
                       ***   *             ** *   *  ***   * *   *  * * *         

consensus_8474#0      TGCATTGATGTGAGGTAGTCATA------------TCGATCGGTTATGCTC-------TT 905
consensus_8474#1      CGCCTAACCATAAGGTTAACACAGCCCAAACNTAGNCTATGGGCCAAGCCCACNGAGGNT 637
                       ** *     * ****   ** *             * ** **  * ** *        *

consensus_8474#0      ACGGAACATTCAACTAAGTGTGTGATTTAATT----GAATCAGGAAAATTATGATGCAGA 961
consensus_8474#1      ACTGGACGTTCCTAAACACCTCCAACACNAGTTTAGGNACCCCAAAAGCGACCAAGCGCA 697
                      ** * ** ***    *    *   *    * *    * * *   ***   *  * **  *

consensus_8474#0      ACAGATG-ATAACGCTTCACGAACTCACGTGTGTTCGTGAAACATACGAAACCACTAGGA 1020
consensus_8474#1      ACCCGCGTANAACGGTCNACTGCTNCG-ACCNGNGGACNCAACGNGCAAGTCCTTGGANA 756
                      **    * * **** *  **     *      *       ***   * *  **      *

consensus_8474#0      ACAA---AAAGAAGAATAAAAAAGGAACAACAATGATA-AAACATACATATGTTCGTGT- 1075
consensus_8474#1      GTATCTCNAAGTGGACTAGNCATCNTGCACTGGTTGCACGGGCATACAGANCCACTTANA 816
                        *     ***  ** **   *     **    *   *    ****** *    * *   

consensus_8474#0      TACAGTTGAATGC-GATGAACTTGAATG-----AGGTGCGAGTGAGTGTTTAGTATTAAC 1129
consensus_8474#1      TCCAGGNAAGTCCCGGCGGACTAAGGCNTCCATAGNCCGGGGNNAACNAANTTTACCAAN 876
                      * ***   * * * *  * ***           **    * *  *        **  ** 

consensus_8474#0      AAAATAAA-ATCAAGCATGTAAAGCTTAACACACAC-ATACAAACACACACTCGATGTCT 1187
consensus_8474#1      ANNGTAAACGGCTACTTGGNTGCACTGNTTACACTTTAGGCAAGTTCCCAGGTGGANACT 936
                      *   ****   * *    *     **    ****   *  ***   * **   *    **

consensus_8474#0      A-ATACGAGATATAGAACAACAGAGATG-AGGTTGAAGGATTCGTACGTGCTATTGATGC 1245
consensus_8474#1      ACATATTCTTNGNNNTATGGCCAAGAAACACAANGAAACTGNNCAATNAACCGGCATTTC 996
                      * ***           *   *  ***   *    ***        *    *      * *

consensus_8474#0      AAAAGGCACATGACAAGACATGAAGTTATGGGAAAATAAACTACT-CGATCATATTTTAA 1304
consensus_8474#1      AGCACGANCACANCCAACCGGGCTGC-ATGGTACCGCGTAGGACAACAACANTNNCGGAA 1055
                      *  * *  **   * *  *  *  *  **** *      *  **  * *   *     **

consensus_8474#0      AGTTCCACTCACCACGGAAACGAAAAA---CTCGCAACGCATTTTATCAGAACATAATTA 1361
consensus_8474#1      AGNGCCACGTAAGGGGGAAACAAAAAAAAGCANANACAGANACGANCNAGNNCCGGGCCA 1115
                      **  ****  *    ****** *****   *    *  *         **  *      *

consensus_8474#0      TTTGAATTAAAGAAATTTTCAACGAATCTAAAAAAAA- 1398
consensus_8474#1      GTTCGTGNNNCGGCGCGGNGNAGGCATACANTCTCCCG 1153
                       **        *         * * **  *        




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)