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Anopheles gambiae
cluster # 8497 cluster # 8497       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8497#0 length = 1461 sequences # 4  
consensus_8497#1 length = 985 sequences # 2  
consensus_8497#2 length = 707 sequences # 1  
consensus_8497#3 length = 648 sequences # 3  

consensusID : consensus_8497#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1461
fasta sequence
                              [CCGCCCACGCGTCCGGGCCCCTGAACGCAGAAAACGTGCAACTTGATTTAAGGTTGCCTCGAGGCTGACAAAATCCAATCCGGAGCGGTCCAAGTTTTCAGGGAGCGTCGCACTGTCTGTATTAAGTGGTCAAGATGGTGTTAGCCGATTTAGGACGCAAAATTACGAATGCTTTGCACTCGCTAAGCAAAGCGACGATCATAAATGAAGAGGTGTTAGATTCAATGCTGAAAGAGATTTGCACGGCATTGCTCGAGGCGGACGTCAACATTCGGTTGGTGAAGAAGCTGCGTGAAAATGTACGTTCTGTGATCGACTTCGATGAAATGGCCGGAGGTCTGAATAAGCGACGAATGATTCAATCGGCAGTGTTCAAGGAGCTGGTTAAGCTGGTTGATCCGGGCGTGAAACCATACCAGCCCATTAAAGGACGTCCGAACGTGATAATGTTCGTAGGACTGCAGGGATCTGGTAAGACGACAACTTGTACAAAACTGGCGTACCATTATCAAAAGAAAAACTGGAAATCGTGCCTAGTCTGTGCCGATACGTTTCGTGCTGGTGCGTACGATCAAATCAAGCAAAATGCCACCAAGGCGCGTATTCCATTCTACGGTAGCTATACCGAAGTCGATCCGGTCACAATCGCACAGGATGGTGTAGAGATGTTCAAAAAGGAGGGCTTTGAGTTTATAATCGTGGATACGAGTGGCCGACATAAGCAGGAGGAATCACTGTTCGAGGAAATGTTGGCAGTGGCCAACGCGGTCAACCCGGATAACATTATTTTCGTCATGGATTTTTCCATTGGGCAGGCTTGTGAGGCCCAGGCAAAAGCGTTCAAAGAAAAGGTGGACATTGGTTCGGTCATCATTACGAAGCTAGACGGTCATGCGAAGGGTGGCGGTGCACTATCAGCGGTGGCAGCAACTAACTCTCCCATCATTTTCATCGGTACTGGTGAGCACATAGACGACTTGGAACCGTTTAAGACGAAGCCCTTTATTAGCAAACTGCTTGGAATGGGAGACATTGAGGGCTTAATCAGACAAGGTGAACGAATTGAAGCTGGACGACAACGAAGAAGCTAATCGATAAAAACAAACATGGTCAATTCACCATTCGGGACATGTATGAACAGTTCCAAAATATCATGAAGATGGGTCCTTTTTCGCAAATTATGGGAATGATTCCAGGATTTTCTCAAGATTTTATGACCAAGGGCGGTGAGCAAGAGTCAATGGCTAGAATCAAGCGTCTAATGACCATGATGGACTCCATGTCTGACGGGGAGCTCGATAACAAGGACGGTTTACAAAACATGATGCGCCAGCTACAACAAGGTGCGGGCGGCCTCGGTAATTTAATGAGTGGGTTCGGTGGCAAATAGATGGAGGATCGCACCAGAACATTCATCAGCTATTCATCTTTATACTTCCTGGGCTCATTATGTTTTATAAT]

[+] EMBL BM647579             [CCGCCCACGCGTCCGGGCCCCTGAACGCAGAAAACGTGCAACTTGATTTAAGGTTGCCTCGAGGCTGACAAAATCCAATCCGGAGCGGTCCAAGTTTTCAGGGAGCGTCGCACTGTCTGTATTAAGTGGTCAAGATGGTGTTAGCCGATTTAGGACGCAAAATTACGAATGCTTTGCACTCGCTAAGCAAAGCGACGATCATAAATGAAGAGGTGTTAGATTCAATGCTGAAAGAGATTTGCACGGCATTGCTCGAGGCGGACGTCAACATTCGGTTGGTGAAGAAGCTGCGTGAAAATGTACGTTCTGTGATCGACTTCGATGAAATGGCCGGAGGTCTGAATAAGCGACGAATGATTCAATCGGCAGTGTTCAAGGAGCTGGTTAAGCTGGTTGATCCGGGCGTGAAACCATACCAGCCCATTAAAGGACGTCCGAACGTGATAATGTTCGTAGGACTGCAGGGATCTGGTAAGACGACAACTTGTACAAAACTGGCGTACCATTATCAAAAGAAAAACTGGAAATCGTGCCTAGTCTGTGCCGATACGTTTCGTGCTGGTGCGTACGATCAAATCAAGCAAAATGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM622869             [                                                                                                                                            ccgGCCGATTTAGGACGCAAAATTACGAATGCTTTGCACTCGCTAAGCAAAGCGACGATCATAAATGAAGAGGTGTTAGATTCAATGCTGAAAGAGATTTGCACGGCATTGCTCGAGGCGGACGTCAACATTCGGTTGGTGAAGAAGCTGCGTGAAAATGTACGTTCTGTGATCGACTTCGATGAAATGGCCGGAGGTTTGAATAAGCGACGAATGATTCAATCGGCAGTGTTCAAGGAGCTGGTTAAGCTGGTTGATCCGGGCGTGAAGCCATACCAGCCCATTAAAGGACGTCCGAACGTGATAATGTTCGTAGGACTGCAGGGATCTGGTAAGACGACAACTTGTACAAAACTGGCGTACCATTATCAAAAGAAAAACTGGAAATCGTGCCTAGTCTGTGCCGATACGTTTCGTGCTGGTGCGTACGATCAAATCAAGCAAAATGCCACCAAGGCGCGTATTCCATTCTACGGTAGCTATACCGAAGTCGATCCGGTCACAATCGCACAGGATGGTGTAGAGATGTTCAAAAAGGAGGGCTTTGAGTTTATAATCGTGGATACGAGTGGCCGACATAAGCAGGAGGAATCACTGTTCGAGGAAATGTTGGCAGTGGCCAACGCGGTCAACCCGGATAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS08SNC             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAACTGGCGTA CATTATCAAAAGAAAAACTGGAAATCGTGCCTAGTCTGTGCCGATACGTTTCGTGCTGGTGCGTACGATCAAATCAAGCAAAATGCCACCAAGGCGCGTATTCCATTCTACGGTAGCTATACCGAAGTCGATCCGGTCACAATCGCACAGGATGGTGTAGAGATGTTCAAAAAGGAGGGCTTTGAGTTTATAATCGTGGATACGAGTGGCCGACATAAGCAGGAGGAATCACTGTTCGAGGAAATGTTGGCAGTGGCCAACGCGGTCAACCCGGATAACATTATTTTCGTCATGGATTTTTCCATTGGGCAGGCTTGTGAGGCCCAGGCAAAAGCGTTCAAAGAAAAGGTGGACATTGGTTCGGTCATCATTACGAAGCTAGACGGTCATGCGAAGGGTGGCGGTGCACTATCAGCGGTGGCAGCAACTAACTCTCCCATCATTTTCATCGGTACTGGTGAGCACATAGACGACTTGGAACCGTTTAAGACGAAGCCCTTTATTAGCAAACTGCTTGGAATGGGAGACATTGAGGGCTTAATCAGACAAGGTGAACGAATTGAAGCTGGACGACAACGAAGAAGCTAATCGATAAAAACAAACATGGTCAATTCACCATTCGGGACATGTATGAACAGTTCCAA                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX609115             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCCCAGGCAAAAGCGTTCAAAGAAAAGGTGGACATTGGTTCGGTCATCATTACGAAGCTAGACGGTCATGCGAAGGGTGGCGGTGCACTATCAGCGGTGGCAGCAACTAACTCTCCCATCATTTTCATCGGTACTGGTGAGCACATAGACGACTTGGAACCGTTTAAGACGAAGCCCTTTATTAGCAAACTGCTTGGAATGGGAGACATTGAGGGCTTAATC GACAAGGTGAACGAATTGAAGCTGGACGACAACGAAG AGCTAATCGATAAAATCAAACATGGTCAATTCACCATTCGGGACATGTATGAACAGTTCCAAAATATCATGAAGATGGGTCCTTTTTCGCAAATTATGGGAATGATTCCAGGATTTTCTCAAGATTTTATGACCAAGGGCGGTGAGCAAGAGTCAATGGCTAGAATCAAGCGTCTAATGACCATGATGGACTCCATGTCTGACGGGGAGCTCGATAACAAGGACGGTTTACAAAACATGATGCGCCAGCTACAACAAGGTGCGGGCGGCCTCGGTAATTTAATGAGTGGGTTCGGTGGCAAATAGATGGAGGATCGCACCAGAACATTCATCAGCTATTCATCTTTATACTTCCTGGGCTCATTATGTTTTATAAT]


>consensus_8497#0 CCGCCCACGCGTCCGGGCCCCTGAACGCAGAAAACGTGCAACTTGATTTAAGGTTGCCTC GAGGCTGACAAAATCCAATCCGGAGCGGTCCAAGTTTTCAGGGAGCGTCGCACTGTCTGT ATTAAGTGGTCAAGATGGTGTTAGCCGATTTAGGACGCAAAATTACGAATGCTTTGCACT CGCTAAGCAAAGCGACGATCATAAATGAAGAGGTGTTAGATTCAATGCTGAAAGAGATTT GCACGGCATTGCTCGAGGCGGACGTCAACATTCGGTTGGTGAAGAAGCTGCGTGAAAATG TACGTTCTGTGATCGACTTCGATGAAATGGCCGGAGGTCTGAATAAGCGACGAATGATTC AATCGGCAGTGTTCAAGGAGCTGGTTAAGCTGGTTGATCCGGGCGTGAAACCATACCAGC CCATTAAAGGACGTCCGAACGTGATAATGTTCGTAGGACTGCAGGGATCTGGTAAGACGA CAACTTGTACAAAACTGGCGTACCATTATCAAAAGAAAAACTGGAAATCGTGCCTAGTCT GTGCCGATACGTTTCGTGCTGGTGCGTACGATCAAATCAAGCAAAATGCCACCAAGGCGC GTATTCCATTCTACGGTAGCTATACCGAAGTCGATCCGGTCACAATCGCACAGGATGGTG TAGAGATGTTCAAAAAGGAGGGCTTTGAGTTTATAATCGTGGATACGAGTGGCCGACATA AGCAGGAGGAATCACTGTTCGAGGAAATGTTGGCAGTGGCCAACGCGGTCAACCCGGATA ACATTATTTTCGTCATGGATTTTTCCATTGGGCAGGCTTGTGAGGCCCAGGCAAAAGCGT TCAAAGAAAAGGTGGACATTGGTTCGGTCATCATTACGAAGCTAGACGGTCATGCGAAGG GTGGCGGTGCACTATCAGCGGTGGCAGCAACTAACTCTCCCATCATTTTCATCGGTACTG GTGAGCACATAGACGACTTGGAACCGTTTAAGACGAAGCCCTTTATTAGCAAACTGCTTG GAATGGGAGACATTGAGGGCTTAATCAGACAAGGTGAACGAATTGAAGCTGGACGACAAC GAAGAAGCTAATCGATAAAAACAAACATGGTCAATTCACCATTCGGGACATGTATGAACA GTTCCAAAATATCATGAAGATGGGTCCTTTTTCGCAAATTATGGGAATGATTCCAGGATT TTCTCAAGATTTTATGACCAAGGGCGGTGAGCAAGAGTCAATGGCTAGAATCAAGCGTCT AATGACCATGATGGACTCCATGTCTGACGGGGAGCTCGATAACAAGGACGGTTTACAAAA CATGATGCGCCAGCTACAACAAGGTGCGGGCGGCCTCGGTAATTTAATGAGTGGGTTCGG TGGCAAATAGATGGAGGATCGCACCAGAACATTCATCAGCTATTCATCTTTATACTTCCT GGGCTCATTATGTTTTATAAT



consensusID : consensus_8497#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 985
fasta sequence
                              [GGCAAGAATCGGCACGAGGCTATCGATAAAATCAAACATGGTCAATTCACCATTCGGGACATGTATGAACAGTTCCAAAATATCATGAAGATGGGTCCTTTTTCGCAAATTATGGGAATGATTCCAGGATTTTCTCAAGATTTTATGACCAAGGGCGGTGAGCAAGAGTCAATGGCTAGAATCAAGCGTCTAATGACCATGATGGACTCCATGTCTGACGGGGAGCTCGATAACAAGGA-TGGTGCGAAACTG-TTCAGCAAACAGCCAACACGAGTAACGCGAGTGGCTCAAGGATCGGGCGTCATGGAGCGGGAAGTGCGCGATTTGATATCACAGTACACGAAATTCGCTGCAGTCATCAAGAAGATGGGAGGTATTAAGGGACTGTTCAAGAGTGGCGATATGACGAAAAACGTGAATCCGACACAAATGGCCAAACTGAATCAACAGATGGCAAAGATGATTGATCCTCGCATGTTCCAACAGATGGGCGGCATGAACGGTTTACAAAACATGATGCGCCAGCTACAACAAGGTGCGGGCGGCCTCGGTAATTTAATGAGTGGGTTCGGTGGCAAATAGAT-GAGGATCGCACCAGGAACATTCATCAGCTATTCATCTTTTATACTTCCTGGGCTCATTAGTGTCTCTCATACGTGTGTTGAACGANAAAAAAGGGTTGGTTTTTAGCAAACTTATCTGAGCGTATCGACAAGATCGGGAGCAATTAAATGGTATGAATTTGTTAGCCTTTAAAAAGCACGATNAAAATACNNACAAANCCCGAGGGCCATTTATTTCGCGGCCCACAAAAGCCTTTTAATTTCCCGCTTTTTAATTTACAAGCGGGTTTCAATCTCNAAACCTTTTGGCACACTTGCACCAGTCCAACNTTTTTACACAACCGGTCGTGAACTTGGAAAAAAAACCCATTTAGTGTTTATCCCCCAACATTTANAACGCNCTTTTTACATGCACACATTNC]

[+] EMBL BX467570             [GGCAAGAATCGGCACGAGGCTATCGATAAAATCAAACATGGTCAATTCACCATTCGGGACATGTATGAACAGTTCCAAAATATCATGAAGATGGGTCCTTTTTCGCAAATTATGGGAATGATTCCAGGATTTTCTCAAGATTTTATGACCAAGGGCGGTGAGCAAGAGTCAATGGCTAGAATCAAGCGTCTAATGACCATGATGGACTCCATGTCTGACGGGGAGCTCGATAACAAGGA TGGTGCGAAACTG TTCAGCAAACAGCCAACACGAGTAACGCGAGTGGCTCAAGGATCGGGCGTCATGGAGCGGGAAGTGCGCGATTTGATATCACAGTACACGAAATTCGCTGCAGTCATCAAGAAGATGGGAGGTATTAAGGGACTGTTCAAGAGTGGCGATATGACGAAAAACGTGAATCCGACACAAATGGCCAAACTGAATCAACAGATGGCAAAGATGATTGATCCTCGCATGTTCCAACAGATGGGCGGCATGAACGGTTTACAAAACATGATGCGCCAGCTACAACAAGGTGCGGGCGGCCTCGGTAATTTAATGAGTGGGTTCGGTGGCAAATAGAT GAGGATCGCACCAGGAACATTCATCAGCTATTCATCTTTTATACTTCCTGGGCTCATTAGTGTCTCTCATACGTGTGTTGAACGANAAAAAAGGGTTGGTTTTTAGCAAACTTATCTGAGCGTATCGACAAGATCGGGAGCAATTAAATGGTATGAATTTGTTAGCCTTTAAAAAGCACGATNAAAATACNNACAAANCCCGAGGGCCATTTATTTCGCGGCCCACAAAAGCCTTTTAATTTCCCGCTTTTTAATTTACAAGCGGGTTTCAATCTCNAAACCTTTTGGCACACTTGCACCAGTCCAACNTTTTTACACAACCGGTCGTGAACTTGGAAAAAAAACCCATTTAGTGTTTATCCCCCAACATTTANAACGCNCTTTTTACATGCACACATTNC]
[-] EMBL CNS08SND             [                                                                                                                                                                                                                       TGACGGGGAGCTCGATAACAAGGATTGGTGCGAAACTGTTTCAGCAAACAGCCAACACGAGTAACGCGAGTGGCTCAAGGATCGGGCGTCATGGAGCGGGAAGTGCGCGATTTGATATCACAGTACACGAAATTCGCTGCAGTCATCAAGAAGATGGGAGGTTTTAAGGGACTGTTAAAGAGTGGCGATATGACGAAAAACGTGAATCCGACACAAAAAGCCAAACTGAATCAACAGATGGCAAAGATGATTGATCCGCGCATGTTCCAACAGATGGGCGGCATGAACGGTTTACAAAACATGATGCGCCAGCTACAACAAGGTGCGGGCGGCCTCGGTAATTTAATGAGTGGGTTCGGTGGCAAATAGATGGAGGATCGCACCA GAACATTCATCAGCTATTCATTCTTTATACTTCCTGGGCTCATTA TGT T TTATA ATGTGTTGAACGA AAAAAA GGTTTGTTTTTAGC AACTTATCTGAGCGTATCGACAAGATC GGAGCAA TAAATGGTATGATTTTG                                                                                                                                                                                                                                                ]


>consensus_8497#1 GGCAAGAATCGGCACGAGGCTATCGATAAAATCAAACATGGTCAATTCACCATTCGGGAC ATGTATGAACAGTTCCAAAATATCATGAAGATGGGTCCTTTTTCGCAAATTATGGGAATG ATTCCAGGATTTTCTCAAGATTTTATGACCAAGGGCGGTGAGCAAGAGTCAATGGCTAGA ATCAAGCGTCTAATGACCATGATGGACTCCATGTCTGACGGGGAGCTCGATAACAAGGAT GGTGCGAAACTGTTCAGCAAACAGCCAACACGAGTAACGCGAGTGGCTCAAGGATCGGGC GTCATGGAGCGGGAAGTGCGCGATTTGATATCACAGTACACGAAATTCGCTGCAGTCATC AAGAAGATGGGAGGTATTAAGGGACTGTTCAAGAGTGGCGATATGACGAAAAACGTGAAT CCGACACAAATGGCCAAACTGAATCAACAGATGGCAAAGATGATTGATCCTCGCATGTTC CAACAGATGGGCGGCATGAACGGTTTACAAAACATGATGCGCCAGCTACAACAAGGTGCG GGCGGCCTCGGTAATTTAATGAGTGGGTTCGGTGGCAAATAGATGAGGATCGCACCAGGA ACATTCATCAGCTATTCATCTTTTATACTTCCTGGGCTCATTAGTGTCTCTCATACGTGT GTTGAACGANAAAAAAGGGTTGGTTTTTAGCAAACTTATCTGAGCGTATCGACAAGATCG GGAGCAATTAAATGGTATGAATTTGTTAGCCTTTAAAAAGCACGATNAAAATACNNACAA ANCCCGAGGGCCATTTATTTCGCGGCCCACAAAAGCCTTTTAATTTCCCGCTTTTTAATT TACAAGCGGGTTTCAATCTCNAAACCTTTTGGCACACTTGCACCAGTCCAACNTTTTTAC ACAACCGGTCGTGAACTTGGAAAAAAAACCCATTTAGTGTTTATCCCCCAACATTTANAA CGCNCTTTTTACATGCACACATTNC



consensusID : consensus_8497#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 707
fasta sequence
                              [GCAGATCCCCCGAGTTTAAAACAGGAGGGCTTTGAGTTTATAATCGTGGATACGAGTGGCCGACATAAGCAGGAGGAATCACTGTTCGAGGAAATGTTGGCAGTGGCCAACGCGGTCAACCCGGATAACATTATTTTCGTCATGGATGCTACCATTGGGCAGGCTTGTGAGGCCCAGGCAAAAGCGTTCAACAGAAAACGGTGGACATTTGGTTCGGTCATCATTACGAAGCTAGACGGTCATGCGAAGGGTGGCGGTGCACTATCAGCGGTGGCAGCAACTAACTCTCCCATCATTTTCATCGGTACTGGTGAGCACATAGACGACTTGGAACCGTTTAAGACGAAGCCCTTTATTCAGCAAACTGCTTGGAATGGGAGACATTGAGGGCTTAATCGACCAAGGTGAACGAACTTGAAGCTGGACGACAACGAAGCAGCTAATCGATAAAATCAAACATGGTCAATTCACCATTCGGGACATGTATGAACAGTTCCAAAATATCATGAAGCATGGGTCCTCTTTTCGCAAATTATGGGAATGATTCCAGGCATTTCTACAAGATTTCTATGCACCAAGGGCCGGTGAGCAAGAGTCCATTGGCTAGAATCAAGCGTCTAATGACCATGCATGGNCCTCCATGTCTTGACGGGGGAGNCTCNATAACACGGNNTGGTNGCGAAACTGTTCCAGCAAACAGCAACACG]

[+] EMBL AL694717             [GCAGATCCCCCGAGTTTAAAACAGGAGGGCTTTGAGTTTATAATCGTGGATACGAGTGGCCGACATAAGCAGGAGGAATCACTGTTCGAGGAAATGTTGGCAGTGGCCAACGCGGTCAACCCGGATAACATTATTTTCGTCATGGATGCTACCATTGGGCAGGCTTGTGAGGCCCAGGCAAAAGCGTTCAACAGAAAACGGTGGACATTTGGTTCGGTCATCATTACGAAGCTAGACGGTCATGCGAAGGGTGGCGGTGCACTATCAGCGGTGGCAGCAACTAACTCTCCCATCATTTTCATCGGTACTGGTGAGCACATAGACGACTTGGAACCGTTTAAGACGAAGCCCTTTATTCAGCAAACTGCTTGGAATGGGAGACATTGAGGGCTTAATCGACCAAGGTGAACGAACTTGAAGCTGGACGACAACGAAGCAGCTAATCGATAAAATCAAACATGGTCAATTCACCATTCGGGACATGTATGAACAGTTCCAAAATATCATGAAGCATGGGTCCTCTTTTCGCAAATTATGGGAATGATTCCAGGCATTTCTACAAGATTTCTATGCACCAAGGGCCGGTGAGCAAGAGTCCATTGGCTAGAATCAAGCGTCTAATGACCATGCATGGNCCTCCATGTCTTGACGGGGGAGNCTCNATAACACGGNNTGGTNGCGAAACTGTTCCAGCAAACAGCAACACG]


>consensus_8497#2 GCAGATCCCCCGAGTTTAAAACAGGAGGGCTTTGAGTTTATAATCGTGGATACGAGTGGC CGACATAAGCAGGAGGAATCACTGTTCGAGGAAATGTTGGCAGTGGCCAACGCGGTCAAC CCGGATAACATTATTTTCGTCATGGATGCTACCATTGGGCAGGCTTGTGAGGCCCAGGCA AAAGCGTTCAACAGAAAACGGTGGACATTTGGTTCGGTCATCATTACGAAGCTAGACGGT CATGCGAAGGGTGGCGGTGCACTATCAGCGGTGGCAGCAACTAACTCTCCCATCATTTTC ATCGGTACTGGTGAGCACATAGACGACTTGGAACCGTTTAAGACGAAGCCCTTTATTCAG CAAACTGCTTGGAATGGGAGACATTGAGGGCTTAATCGACCAAGGTGAACGAACTTGAAG CTGGACGACAACGAAGCAGCTAATCGATAAAATCAAACATGGTCAATTCACCATTCGGGA CATGTATGAACAGTTCCAAAATATCATGAAGCATGGGTCCTCTTTTCGCAAATTATGGGA ATGATTCCAGGCATTTCTACAAGATTTCTATGCACCAAGGGCCGGTGAGCAAGAGTCCAT TGGCTAGAATCAAGCGTCTAATGACCATGCATGGNCCTCCATGTCTTGACGGGGGAGNCT CNATAACACGGNNTGGTNGCGAAACTGTTCCAGCAAACAGCAACACG



consensusID : consensus_8497#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 648
fasta sequence
                              [CCGCTTTTTCTACGACAATTTGCGTATCGTTGCAATCTCCAATTTATAGTAATATTGCAACAATTAACATTATTTTGAAGTATTATTAGACCCGTGAACGCAGAAAACGTGCAACTTGATTTAAGGTTGCCTCGAGGCTGACAAAATCCAATCCGGAGCGGTCCAAGTTTTCAGGGAGCGTCGCACTGTCTGTATTAAGTGGTCAAGATGGTGTTAGCCGATTTAGGACGCAAAATTACGAATGCTTTGCACTCGCTAAGCAAAGCGACGATCATAAATGAAGAGGTGTTAGATTCAATGCTGAAAGAGATTTGCACGGCATTGCTCGAGGCGGACGTCAACATTCGGTTGGTGAAGAAGCTGCGTGAAAATGTACGTTCTGTGATCGACTTCGATGAAATGGCCGGAGGTTTGAATAAGCGACGAATGATTCAATCGGCAGTGTTCAAGGAGCTGGTTAAGCTGGTTGATCCGGGCGTGAAGCCATACCAGCCCATTAAAGGACGTCCGAACGTGATAATGTTCGTAGGACTGCAGGGATCTGGTAAGACGACAACTTGTACAAAACTGGCGTACCATTATCAAAAGAAAAACTGGAAATCGTGCCTAGTCTGTGCCGATACGTTTCGTGCTGGTGCGTACGATCAA]

[+] EMBL BM624673             [CCGCTTTTTCTACGACAATTTGCGTATCGTTGCAATCTCCAATTTATAGTAATATTGCAACAATTAACATTATTTTGAAGTATTATTAGACCCGTGAACGCAGAAAACGTGCAACTTGATTTAAGGTTGCCTCGAGGCTGACAAAATCCAATCCGGAGCGGTCCAAGTTTTCAGGGAGCGTCGCACTGTCTGTATTAAGTGGTCAAGATGGTGTTAGCCGATTTAGGACGCAAAATTACGAATGCTTTGCACTCGCTAAGCAAAGCGACGATCATAAATGAAGAGGTGTTAGATTCAATGCTGAAAGAGATTTGCACGGCATTGCTCGAGGCGGACGTCAACATTCGGTTGGTGAAGAAGCTGCGTGAAAATGTACGTTCTGTGATCGACTTCGATGAAATGGCCGGAGGTTTGAATAAGCGACGAATGATTCAATCGGCAGTGTTCAAGGAGCTGGTTAAGCTGGTTGATCCGGGCGTGAAGCCATACCAGCCCATTAAAGGACGTCCGAACGTGATAATGTTCGTAGGACTGCAGGGATCTGGTAAGACGACAACTTGTACAAAACTGGCGTACCATTATCAAAAGAAAAACTGGAAATCGTGCCTAGTCTGTGCCGATACGTTTCGTGCTGGTGCGTACGATCA ]
[+] EMBL BM599313             [         ccgCGACAATTTGCGTATCGTTTCTATCTCCAATTTATAGTAATATTGCAACAATTAACATTATTTTGCAGTATTATTAGGCCCCTGAACGCAGAAAACGTGCAACTTGATTTAAGGTTGCCTCGAGGCTGACAAAATCCAATCCGGAGCGGTCCAAGTTTTCAGGGAGCGTCGCACTGTCTGTATTAAGTGGTCAAGATGGTGTTAGCCGATTTAGGACGCAAAATTACGAATGCTTTGCACTCGCTAAGCAAAGCGACGATCATAAATGAAGAGGTGTTAGATTCAATGCTGAAAGAGATTTGCACGGCATTGCTCGAGGCGGACGTCAACATTCGGTTGGTGAAGAAGCTG                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM609622             [             ccgAATTTGCGTATCGTTGCAATCTCCAATTTATAGTAATATTGCAACAATTAACATTATTTTGAAGTATTATTAGACCCGTGAACGCAGAAAACGTGCAACTTGATTTAAGGTTGCCTCGAGGCTGACAAAATCCAATCCGGAGCGGTCCAAGTTTTCAGGGAGCGTCGCACTGTCTGTATTAAGTGGTCAAGATGGTGTTAGCCGATTTAGGACGCAAAATTACGAATGCTTTGCACTCGCTAAGCAAAGCGACGATCATAAATGAAGAGGTGTTAGATTCAATGCTGAAAGAGATTTGCACGGCATTGCTCGAGGCGGACGTCAACATTCGGTTGGTGAAGAAGCTGCGTGAAAATGTACGTTCTGTGATCGACTTCGATGAAATGGCCGGAGGTTTGAATAAGCGACGAATGATTCAATCGGCAGTGTTCAAGGAGCTGGTTAAGCTGGTTGATCCGGGCGTGAAGCCATACCAGCCCATTAAAGGACGTCCGAACGTGATAATGTTCGTAGGACTGCAGGGATCTGGTAAGACGACAACTTGTACAAAACTGGCGTACCATTATCAAAAGAAAAACTGGAAATCGTGCCTAGTCTGTGCCGATACGTTTCGTGCTGGTGCGTACGATCAA]


>consensus_8497#3 CCGCTTTTTCTACGACAATTTGCGTATCGTTGCAATCTCCAATTTATAGTAATATTGCAA CAATTAACATTATTTTGAAGTATTATTAGACCCGTGAACGCAGAAAACGTGCAACTTGAT TTAAGGTTGCCTCGAGGCTGACAAAATCCAATCCGGAGCGGTCCAAGTTTTCAGGGAGCG TCGCACTGTCTGTATTAAGTGGTCAAGATGGTGTTAGCCGATTTAGGACGCAAAATTACG AATGCTTTGCACTCGCTAAGCAAAGCGACGATCATAAATGAAGAGGTGTTAGATTCAATG CTGAAAGAGATTTGCACGGCATTGCTCGAGGCGGACGTCAACATTCGGTTGGTGAAGAAG CTGCGTGAAAATGTACGTTCTGTGATCGACTTCGATGAAATGGCCGGAGGTTTGAATAAG CGACGAATGATTCAATCGGCAGTGTTCAAGGAGCTGGTTAAGCTGGTTGATCCGGGCGTG AAGCCATACCAGCCCATTAAAGGACGTCCGAACGTGATAATGTTCGTAGGACTGCAGGGA TCTGGTAAGACGACAACTTGTACAAAACTGGCGTACCATTATCAAAAGAAAAACTGGAAA TCGTGCCTAGTCTGTGCCGATACGTTTCGTGCTGGTGCGTACGATCAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8497#0      ------------------------------------------------------------
consensus_8497#3      CCGCTTTTTCTACGACAATTTGCGTATCGTTGCAATCTCCAATTTATAGTAAT--ATTGC 58
consensus_8497#2      --GCAGATCCCCCGA--GTTTAA--AACAGGAGGGCTTTGAGTTTATAATCGTGGATACG 54
consensus_8497#1      ----------GGCAAGAATCGGCACGAGGCTATCGA-TAAAATCAAACATGGTCAATT-C 48
                                                                                  

consensus_8497#0      -------------CCGCCCACGCGTC--CGGGC-CCCTGAACGCAGAAAACGTGCAACTT 44
consensus_8497#3      AACAATTAACATTATTTTGAAGTATTATTAGAC-CCGTGAACGCAGAAAACGTGCAACTT 117
consensus_8497#2      AGTGGCCGACATAAGCAGGAGGAATCACTGTTC-GAGGAAATGTTGGCAGTGGCCAACGC 113
consensus_8497#1      ACCATTCGGGACATGTATGAACAGTTCCAAAATATCATGAAGATGGGTCCTTTTTCGCAA 108
                                         *    *              **    *           *  

consensus_8497#0      GATTTAAGGTTGCCTCGAGGCTGACAAAATCCAATCCGGAGCGGTCCAAGTTTTCAGGG- 103
consensus_8497#3      GATTTAAGGTTGCCTCGAGGCTGACAAAATCCAATCCGGAGCGGTCCAAGTTTTCAGGG- 176
consensus_8497#2      GGTCAACCCGGATAACATTATTTTCGTCATGGATGCTACCATTGGGCAGGCTTGTGAGGC 173
consensus_8497#1      ATTATGGGAATGATTCCAGGATTTTCTCAAGATTTTATGACCAAGGGCGGTGAGCAAGAG 168
                        *            *     *      *                    *       *  

consensus_8497#0      --AGCGTCGCACTGTCTGTATTAAGTGGTCAAGATGGTGTTAGCCGAT--TTAGGACGCA 159
consensus_8497#3      --AGCGTCGCACTGTCTGTATTAAGTGGTCAAGATGGTGTTAGCCGAT--TTAGGACGCA 232
consensus_8497#2      CCAGGCAAAAGCGTTCAACAGAAAACGGTGGACATTTGGTTCGGTCATCATTACGAAGCT 233
consensus_8497#1      TCAATGGCTAGAATCAAGCGTCTAATGACCATGATGGACTCCATGTCT-GACGGGGAGCT 227
                        *                    *  *      **    *       *      *  ** 

consensus_8497#0      AAAT-----TACGAATGCTTTGCACTCGCTAAGCAAAGCGACGATC--A-TAAATGAAGA 211
consensus_8497#3      AAAT-----TACGAATGCTTTGCACTCGCTAAGCAAAGCGACGATC--A-TAAATGAAGA 284
consensus_8497#2      AGACGGTCATGCGAAGGGTGGCGGTGCACTATCAGCGGTGGCAGCA--ACTAACTCTCCC 291
consensus_8497#1      CGATA---ACAAGGATGGTGCGAAACTGTTCAGCAAACAGCCAACACGAGTAACGCGAGT 284
                        *         * * * *          *         * *      * ***       

consensus_8497#0      GGTGTTAGATTCAA----TGCTGAAAGAGATTTGCACGGC-----ATTGCTCGAGGCGGA 262
consensus_8497#3      GGTGTTAGATTCAA----TGCTGAAAGAGATTTGCACGGC-----ATTGCTCGAGGCGGA 335
consensus_8497#2      ATCATTTTCATCGG----TACTGGTGAGCACATAGACGACTTGGAACCGTTTAAGACGAA 347
consensus_8497#1      GGCTCAAGGATCGGGCGTCATGGAGCGGGAAGTGCGCGATTTGATATCACAGTACACGAA 344
                                **          *      *  *   **       *       *  ** *

consensus_8497#0      CGTCAACATTCGGTTGG-TGAAGAAGCTGCGTGAAAATGTACGTTCTGTGATCGACTTCG 321
consensus_8497#3      CGTCAACATTCGGTTGG-TGAAGAAGCTGCGTGAAAATGTACGTTCTGTGATCGACTTCG 394
consensus_8497#2      GCCCTTTATTCAGCAAACTGCTTGGAATGGGAGACATTGAGGGCT---TAATCGACCAAG 404
consensus_8497#1      ATTCGCTG--CAGTCA--TCAAGAAGATGGGAGGTATTAAGGGAC---TGTTCAAGAGTG 397
                         *      * *     *        ** * *  * *    *     *  ** *    *

consensus_8497#0      ATGAAATGGCCGGAGGTCTGAATAAGCGACGAATG-----ATTCAATCGGCAG-TGTTCA 375
consensus_8497#3      ATGAAATGGCCGGAGGTTTGAATAAGCGACGAATG-----ATTCAATCGGCAG-TGTTCA 448
consensus_8497#2      GTGAACGAACTTGAAGCTGGAC--GACAACGAAGC-----AGCTAATCGATAA-AATCAA 456
consensus_8497#1      GCGATATGACGAAAAACGTGAATCCGACACAAATGGCCAAACTGAATCAACAGATGGCAA 457
                        **     *   *     **       ** **       *   ****   *       *

consensus_8497#0      AGGAGCTGGTTAAGCTGGTTGATCCGGGCGTGAAACCATACCAGCCCATTAAAGGAC--- 432
consensus_8497#3      AGGAGCTGGTTAAGCTGGTTGATCCGGGCGTGAAGCCATACCAGCCCATTAAAGGAC--- 505
consensus_8497#2      ACATGGTCAATTCACCATTCGGGACATGTATGAA-CAGTTCCAAAATATCATGAAGCATG 515
consensus_8497#1      AGATGATTGATCC-TCGCATGTTCCAACAGATGGGCGGCATGAACGGTTTACAAAACATG 516
                      *   * *   *         *   *          *      *     * *     *   

consensus_8497#0      -GTCCGAACGTGATAA---TGTTCGTAGGACTGCAGGGATCTG-GTAAGACGACAACTTG 487
consensus_8497#3      -GTCCGAACGTGATAA---TGTTCGTAGGACTGCAGGGATCTG-GTAAGACGACAACTTG 560
consensus_8497#2      GGTCCTCTTTTCGCAAAT-TATGGGAATGATTCCAGGCATTTCTACAAGATTTCTATGCA 574
consensus_8497#1      -ATGCGCCAGCTACAACAAGGTGCGGGCGGCCTCGGTAATTTAATGAGTGGGTTCGGTGG 575
                        * *         **     *  *   *    * *  ** *    *             

consensus_8497#0      TACAAAACTGGCGTAC-CATTATCAAAAGA--AAAACTGGAAATC--GTGCCTA-GTCTG 541
consensus_8497#3      TACAAAACTGGCGTAC-CATTATCAAAAGA--AAAACTGGAAATC--GTGCCTA-GTCTG 614
consensus_8497#2      CCAAGGGCCGGTGAGC-AAGAGTCCATTGGCTAGAATCAAGCGTCTAATGACCATGCATG 633
consensus_8497#1      CAAATAGATGAGGATCGCACCAGGAACATTCATCAGCTATTCATCTTTTATACT-TCCTG 634
                         *     *  *  *  *      *        *        **   *         **

consensus_8497#0      TGCCGAT--ACGTTTCGTGCTGGTGCGT---ACGATCAAATCAAGCAAAATGCCACCAAG 596
consensus_8497#3      TGCCGAT--ACGTTTCGTGCTGGTGCGT---ACGATCAA--------------------- 648
consensus_8497#2      GNCCTCC--ATGTCTTGACGGGGGAGNC---TCNATAACACGGNNTGGTNGCGAAACTGT 688
consensus_8497#1      GGCTCATTAGTGTCTCTCATACGTGTGTTGAACGANAAAAAAGGGTTGGTTTTTAGCAAA 694
                        *        ** *       *         * *  *                      

consensus_8497#0      GCGCGTATTCCATTCTACGGTAGCTATACCGAAGTCGATCCGGTCACAATCGCACAGGAT 656
consensus_8497#3      ------------------------------------------------------------
consensus_8497#2      TCCAGCAAACAGCAACACG----------------------------------------- 707
consensus_8497#1      CTTATCTGAGCGTATCGACAAGATCGGGAGCAATTAAATGGTATGAATTTGTTAGCCTTT 754
                                                                                  

consensus_8497#0      GGTGTAGAGATGTTCAAAAAGGAGGGCTTTGAGTTTATAATCGTGGATACGAGTGGCCGA 716
consensus_8497#3      ------------------------------------------------------------
consensus_8497#2      ------------------------------------------------------------
consensus_8497#1      AAAAAGCACGATNAAAATACNNACAAANCCCGAGGGCCATTTATTTCGCGGCCCACAAAA 814
                                                                                  

consensus_8497#0      CATAAGCAGGAGGAATCACTGTTCGAGGAAATGTTGGCAGTGGCCAACGCGGTCAACCCG 776
consensus_8497#3      ------------------------------------------------------------
consensus_8497#2      ------------------------------------------------------------
consensus_8497#1      GCCTTTTAATTTCCCGCTTTTTAATTTACAAGCGGGTTTCAATCTCNAAACCTTTTGGCA 874
                                                                                  

consensus_8497#0      GATAACATTATTTTCGTCATGGATTTTTCCATTGGGCAGGCTTGTGAGGCCCAGGCAAAA 836
consensus_8497#3      ------------------------------------------------------------
consensus_8497#2      ------------------------------------------------------------
consensus_8497#1      CACTTGCACCAGTCCAACNTTTTTACACAACCGGTCGTGAACTTGGAAAAAAAACCCATT 934
                                                                                  

consensus_8497#0      GCGTTCAAAGAAAAGGTGGACATTGGTTCGGTCATCATTACGAAGCTAGACGGTCATGCG 896
consensus_8497#3      ------------------------------------------------------------
consensus_8497#2      ------------------------------------------------------------
consensus_8497#1      TAGTGTTTATCCCCCAACATTTANAACGCNCTTTTTACATGCACACATTNC--------- 985
                                                                                  

consensus_8497#0      AAGGGTGGCGGTGCACTATCAGCGGTGGCAGCAACTAACTCTCCCATCATTTTCATCGGT 956
consensus_8497#3      ------------------------------------------------------------
consensus_8497#2      ------------------------------------------------------------
consensus_8497#1      ------------------------------------------------------------
                                                                                  

consensus_8497#0      ACTGGTGAGCACATAGACGACTTGGAACCGTTTAAGACGAAGCCCTTTATTAGCAAACTG 1016
consensus_8497#3      ------------------------------------------------------------
consensus_8497#2      ------------------------------------------------------------
consensus_8497#1      ------------------------------------------------------------
                                                                                  

consensus_8497#0      CTTGGAATGGGAGACATTGAGGGCTTAATCAGACAAGGTGAACGAATTGAAGCTGGACGA 1076
consensus_8497#3      ------------------------------------------------------------
consensus_8497#2      ------------------------------------------------------------
consensus_8497#1      ------------------------------------------------------------
                                                                                  

consensus_8497#0      CAACGAAGAAGCTAATCGATAAAAACAAACATGGTCAATTCACCATTCGGGACATGTATG 1136
consensus_8497#3      ------------------------------------------------------------
consensus_8497#2      ------------------------------------------------------------
consensus_8497#1      ------------------------------------------------------------
                                                                                  

consensus_8497#0      AACAGTTCCAAAATATCATGAAGATGGGTCCTTTTTCGCAAATTATGGGAATGATTCCAG 1196
consensus_8497#3      ------------------------------------------------------------
consensus_8497#2      ------------------------------------------------------------
consensus_8497#1      ------------------------------------------------------------
                                                                                  

consensus_8497#0      GATTTTCTCAAGATTTTATGACCAAGGGCGGTGAGCAAGAGTCAATGGCTAGAATCAAGC 1256
consensus_8497#3      ------------------------------------------------------------
consensus_8497#2      ------------------------------------------------------------
consensus_8497#1      ------------------------------------------------------------
                                                                                  

consensus_8497#0      GTCTAATGACCATGATGGACTCCATGTCTGACGGGGAGCTCGATAACAAGGACGGTTTAC 1316
consensus_8497#3      ------------------------------------------------------------
consensus_8497#2      ------------------------------------------------------------
consensus_8497#1      ------------------------------------------------------------
                                                                                  

consensus_8497#0      AAAACATGATGCGCCAGCTACAACAAGGTGCGGGCGGCCTCGGTAATTTAATGAGTGGGT 1376
consensus_8497#3      ------------------------------------------------------------
consensus_8497#2      ------------------------------------------------------------
consensus_8497#1      ------------------------------------------------------------
                                                                                  

consensus_8497#0      TCGGTGGCAAATAGATGGAGGATCGCACCAGAACATTCATCAGCTATTCATCTTTATACT 1436
consensus_8497#3      ------------------------------------------------------------
consensus_8497#2      ------------------------------------------------------------
consensus_8497#1      ------------------------------------------------------------
                                                                                  

consensus_8497#0      TCCTGGGCTCATTATGTTTTATAAT 1461
consensus_8497#3      -------------------------
consensus_8497#2      -------------------------
consensus_8497#1      -------------------------
                                               




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)