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Anopheles gambiae
cluster # 8510 cluster # 8510       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8510#0 length = 1444 sequences # 8  
consensus_8510#1 length = 658 sequences # 1  
consensus_8510#2 length = 488 sequences # 1  

consensusID : consensus_8510#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1444
fasta sequence
                              [TTCCGGGAAGGAGGGTCACAATCGGTTCGTTTGTTTAGCGATAGAACCTACCCTCAAAAGCGGTACGGTGCGGTCGTTCTTCTAATCGCACCTTTTCGTAACCGCATATCAATCAAGAAAGGGGAAGGGGTTAAAG-GTGTGCTTGCAATGCCACGCGCTACATATCATATTGCTCGTGTTTACGATAGCGCTTCTCAGCACAAATGGCCAGAACGCGAATTTGAAGAATGCACAAAAGCACACCGCCACCCCGATGTCGGTGGGCGGCCTTCAGCGGGTGGCCGTCGATCCGATGACGCTTCTGCCCGAGGCCTTGGAAAATCTGCTCGTCGAGCGGGTGGTCGGATCGCCAGGCCACGAGAATGTGAAAAACTACATCGTGCAGCAGATGCAGCGGCATGGCTACACCGTCGAGCTGGACGAGTTCGATGAAACCGTGCCCATCCTGGGGAAGTTACGGTTTGCCAACGTGATCGCGTCGCTCAA-CCCC-AAAGCTACCCGGAATCTGGTGCTGGCCTGCCACTACGACAGTAAATACTTCCCCGGCCAACAGTTTATCGGAGCGACCGATTCGTCCGTGCCGTGCGCGATGCTCATTACGATGGCGTCCCTGCTCGCTCCCCACCTCGAGTCCATCAAAGCCAGGACGGACCTGAACCTGCAGTTCATTTTCTTCGACGGCGAGGAAGCATTCCAGAACTGGTCCGAGCGAGATTCGCTCTACGGTGCACGCCACCTGGCCGAACGGATGGAGCGCGATGGTACGCTGCAACGGATGGACATGCTCGTGCTGCTCGATCTGCTCGGTACGCCCGAGCCAACCTTTTACAGCTACTTTGCCGAGACGGAAAACTGGTACGTGCAGCTAA-TTTCCGCCGAACGGCGGCT-GGACGAGCTGGGCCATCTGGAGAACTACAGTACGAGCAGCGTGTCGCCCACCCAGAGAACGATCGCGTACTTTAAGCCCGCCTCAGTGTTTGCGGGCATCGAGGATGATCACATACCGTTCCTAAGGCGGGGCGTGCCCATCCTGCACGTCATTCCCAG-CCCCTTCC-CCGAGGTTTGGCACAAGCTGGAAGATAATGCGGACATCGTGGACGTACCGACGGTGCGCAATTTGGTGCGCATATTTTCCGTCTTTGTGCTGGAGTATTTGAACGTGCCGTTATGACAGTCGCATGATGAATTGTAGAACCAATGCAGCACCATTCCTTTCGGGGCGGTACGCGTACTTACACGCTCGGGGCT-AATTTTATCTCTTGTTTTTTGAGCGATTTTTAAATAATTCATTACGGTTTCTTATCGTGAAGGAAGCAAA-GAAAAAAAGAAGGAAAACACCAATCTTACTGTTTAATGGGCCTTTTCCCCCCTTCCAAGCGTACTACATATCTGTAAAAAA-AATGTAACACTTTTGTGCAATAAATACAAATTGTTGAACAATCAT]

[+] EMBL CNS08HMY             [TTCCGGGAAGGAGGGTCACAATCGGTTCGTTTGTTTAGCGATAGAACCTACCCTCAAAAGCGGTACGGTGCGGTCGTTCTTCTAATCGCACCTTTTCGTAACCTCATATCAATCAAGAAAGGGGAAGGGGTTAAAG GTGTGCTTGCAATGCCACGCGCTACATATCATACTGCTCGTGTTTACAATACCGCTTCTCAGCACAAATGGCCAGAACGCGAATTTGAAGAATGCGCAAAAGCACACAGCCACCCCGATGTCGGTGGGCGGCCTTCAGCGGGTGGCCGTCGATCCGATGACGCTTCTGCCCGAGGCCTTGGAAAATCTGCTCGTCGAGCGGGTCGTCGGAACGCCAGGCCACGAGAATGTGAAAAATTACATCGTGCAGCAGATGCAGCGGCACGGCTACACCGTCGAGTTGGACGAGTTCGATGAAACCGTGCCTATCCTGGGGAAGTTACGGTTTGCCAACGTGATCGCGTCGCTCAA CCCC AAAGCTACCCGGAATCTGGTGCTGGCCTGCCACTACGACAGTAAATACTTCCCCGGCCAACAGTTTATCGGAGCGACCGATTCGTCCGTGCCGTGCGCGATGCTCATTACGATGGCGTCCCTGCTCGCTCCCCACCTCTTGTCCATCAAAGCCAGGACGGACCTGAACCTGCAGTTCATTTTCTTCGACGGCGAGGAAGCATTCCAGAACTGGTCCGAGCGAGATTCGCTCTACGGTGCGCGCCACCTGGCCGAACGGATGGAGCGCGATGGTACGCTGCCACGGATGGACATGCTCGTGCTGCTCGATCTGCTCGGTACGCCCGAGCCAACCTTTTACAGCTACTTTGCCGAGACGGAAAACTGGTACGTGCAGCTAA TTTCCGCCGAACGGGCGTG GGACGAGCTGGGCCATCTGGAGAACTACAGTACGAGCAGCGTGTCGCCCACCCAGAGAACGATCGCGTACTTTAAGCCCGCCTCAGTGTTTGCGGGCATCGAGGATGATCACATACCGTTCCTAAGGCGGG                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS09G0N             [    GGGAAGGATGGTCACAATCAGTTCGTTTGTTTAGCGATAGAACCTACCCTCAAAAGCGGTACGGTGCGGTCGTTCTTCTAATCGCACCTTTTCGTAACCGCATATCAATCAAGAAAGGGGAAGGGGTTAAAG GTGTGCTTGCAATGCCACGCG TACATATCATATTGCTCGTGTTTACGATAGCGCTTCTCAGCACAAATGGCCAGAACGCGAATTTGAAGAATGCACAAAAGCGCACCGCCACCCCGATGTCGGTGGGCGGCCTTCAGCGGGTGGCCGTCGATCCGATGACGCTTCTGCCCGAGGCCTTGGAAAATCTGCTCGTCGAGCGGGTGGTCGGATCGCCAGGCCACGAGAATGTGAAAAACTACATCGTGCAGCAGATGCAGCGGCATGGCTACACCGTCGAGCTGGACGAGTTCGATGAAACCGTGCCCATCCTGGGGAAGCTACGGTTTGCCAACGTGATCGCGTCGCTCAA CCCCAAAAGCTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS09AUI             [                                                                                   AATCGCACCTTTTCGTAACCGCATATCAATCAAGAAAGGGGAAGGGGTTAAAGAGTGTGCTTGCAATGCCACGCGCTACATATCATATTGCTCGTGTTTACGATAGCGCTTCTCAGCACAAATGGCCAGAACGCGAATTTGAAGAATGCACAAAAGCACACCGCCACCCCGATGTCGGTGGGCGGCCTTCAGCGGGTGGCCGTCGATCCGATGACGCTTCTGCCCGAGGCCTTGGAAAATCTGCTCGTCGAGCGGGTGGTCGGATCGCCAGGCCACGAGAATGTGAAAAACTACATCGTGCAGCAGATGCAGCGGCATGGCTACACCGTCGAGCCGGACGAGTTCGATGAAACCGTGCCCATCCTGGGGAAGCTACGGTTTGCCAACGTGATCGCGTCGCTCAACCCCC AAAGCTACCCGCAATTTGGTGCTGGCCTGCCACTACGACAGTAAATACTTCCCCGGCCAACAGTTTATCGGAGCGACCGATTCGTCCGTGCCGTGCGCGATGCTCATTACGATGGCGTCCCTGCTCGCTCCCCACCTCGAGTCCATCAAAGCCAGGACGGACCTGAACCTGCAGTTCATTTTCTTCGACGGCGAGGAAGCATTCCAGAACTGGTCCGAGCGAGATTCGCTCTACGGTGCACGCCACCTGGCCGAACGGATGGAGCGCGATGGTACGCTGCAACGGATGGACATGCTCGTGCTGCTCGATTTGCTCGGTACACCCGAGCCAACCTTTTACAGCTACTTTGCCGAGACGGAAAACTGGTACGTGCAGCTAA TTTCCGCCGAACGG GGCTAGGACGAGCTGGGCCATCTGGAGAACTACAGTACGAGCAGCGTGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AL694206             [                                                                                                                                                                                                                                                                                                                                                                                                                                                           gaatccccGAGGTTA GGTTTG CAACGTGATCGCGTCGCTCAA CCCC AAAGCTACCCGGAATCTGGTGCTGGCCTGCCACTACGACAGTAAATACTTCCCCGGCCAACAGTTTATCGGAGCGACCGATTCGTCCGTGCCGTGCGCGATGCTCATTACGATGGCGTCCCTGCTCGCTCCCCACCTCGAGTCCATCAAAGCCAGGACGGACCTGAACCTGCAGTTCATTTTCTTCGACGGCGAGGAAGCATTCCAGAACTGGTCCGAGCGAGATTCGCTCTACGGTGCACGCCACCTGGCCGAACGGATGGAGCGCGATGGTACGCTGCAACGGATGGACATGCTCGTGCTGCTCGATCTGCTCGGTACGCCCGAGCCAAACTTTTACAGCTACTTTGCCGAGACGGAAAACTGGTACGTGCAGCTAA TTTCGGCCGAACGGCGGCT GGACGAGCTGGGCCATCTGGAGAACTACAGTACGAGCAGCGTGTCACCGACCCAGAGGACGATCGCGTACTTTAAGCCCGCCTCAGTGTTTGCGGGCATCGAGGATGATCACATACCGTTCCTAAGGC GGGCGTGCCCATCCTGCACGTCATTCCCAG  CCCTTCC CCGAGG                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CNS09G0O             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCGTCGCTCAA CCCC AAAGCTACCCGCAATTTGGTGCTGGCCTGCCACTACGACAGTAAATACTTCCCCGGCCAACAGTTTATCGGAGCGACCGATTCGTCCGTGCCGTGCGCGATGCTCATTACGATGGCGTCCCTGCTCGCTCCCCACCTCGAGTCCATCAAAGCCAGGACGGACCTGAACCTGCAGTTCATTTTCTTCGACGGCGAGGAAGCATTCCAGAACTGGTCCGAGCGAGATTCGCTCTACGGTGCACGCCACCTGGCCGAACGGATGGAGCGCGATGGTACGCTGCAACGGATGGACATGCTCGTGCTGCTCGATCTGCTCGGTACACCCGAGCCAACCTTTTACAGCTACTTTGCCGAGACGGAAAACTGGTACGTGCAGCTAA TTTGCGCCGAACGGCGGCT GGACGAGCTGGGCCATCTGGAGAACTACAGTACGAGCAGCGTGTCGCCCACCCAGAGAACGATCGCCTACTTCAAGCCCGCCTCAGTGTTTcaccatt                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS08HMZ             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCGCTCAA CCCC AAAGCTACCCGGAATCTGGTGCTGGCCTGCCACTACGACAGTAAATACTTCCCCGGCCAACAGTTTATCGGAGCGACCGATTCGTCCGTGCCGTGCGCGATGCTCATTACGATGGCGTCCCTGCTCGCTCCCCACCTCGAGTCCATCAAAGCCAGGACGGACCTGAACCTGCAGTTCATTTTCTTCGACGGCGAGGAAGCATTCCAGAACTGGTCCGAGCGAGATTCGCTCTACGGTGCGCGCCACCTGGCCGAACGGATGGAGCGCGATGGTACGCTGCCACGGATGGACATGCTCGTGCTGCTCGAAAAGCTCGGTACGCCCGAGCCAACCTTTTACAGCTACTTTGCCGAGACGGAAAACTGGTACGTGCAGCTAA TTTCCGCCGAACGGCGGCT GGACGAGCTGGGCCATCTGGAGAACTACAGTACGAGCAGCGTGTCGCCCACCCAGAGAACGATCGCGTACTTTAAGCCCGCCTCAGTGTTTGCGGGCATCGAGGATGATCACATACCGTTCCTAAGGCGGGGCGTGCCCATCCTGCACGTCATTCCCAG CCCCTTCC CCGAGGTTTGGCACAAGCTGGAAGATAATGCGGACATCGTGGACGTACCGACGGTGCGCAATTTGGTGCGCATATTTTCCGTCTTTGTGCTGGAGTATTTGAACGTGCCGTTATGACAGTCGCATGATGAATTGTGGAACCAATGCAGCACCATTCCTTTCGGGGCGGTACGCGTACTTACACGCTCGGGGCT AATTTTATCTCTTGTTTTTTGAGCGATTTTTAAATAATTCATTACGGTTTCTTATCGTGAAGGAAGCAAAGGAAAAAAAGAAGGAAAACACCAATCTTACTGTTAAATGGGCGCTTTCCCCCCTTCCAAGCGTACTACATATCTGTAAAAAACAATGTAACACTTTTGTGCAATAAATACAAATTGTT          ]
[-] EMBL CNS09AUJ             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AATATTTCCCCGGCCAACAGTTTATCGGAGCGACCGATTCGTCCGTGCCGTGCGCGATGCTCATTACGATGGCGTCCCTGCTCGCTCCCCACCTCGAGTCCATCAAAGCCAGGACGGACCTGAACCTACAGTTCATTTTCTTCGACGGCGAGGAAGCATTCCAGAACTGGTCCGAGCGAGATTCGCTCTACGGTGCACGCCACCTGGCCGAACGGATGGAGCGCGATGGTACGCTGCAACGGATGGACATGCTCGTGCTGCTCGATCTGCTCGGTACACCCGAGCCAACTTTTTACAGCTACTTTGCCGAGACGGAAAACTGGTACGTGCAGCTAATTTTCCGCCGAACGGCGGCT GGACGAGCTGGGCCATTTGGAGAACTACAGTACGAGCAGCGTGTCGCCCACCCAGAGAACGATCGCCTACTTCAAGCCCGCCTCAGTGTTTGCGGGCATCGAGGATGATCACATACCGTTCCTAAGGCGGGGCGTGCCCATCCTGCACGTCATTCCCAGTCCCCTTCCTCCGAGGTTTGGCACAAGCTGGAAGATAATGCGGACATCGTGGACGTACCGACGGTGCGCAATTTGGTGCGCATATTTTCCGTCTTTGTGCTGGAGTATTTGAACGTGCCGTTATGACAGTCACATGATGAATTGTAGAAC  ATGCAGCACCATTCCTTTCGGGGCGGTACGCGTACTTACACGCTCGGGGCTAAATTTTTTCTCTTGTTTTTTGAGCGATTTTTAAATAATTCATTACGGTTTCCTATCGTGAAGGAAGCAAA GAAAAAAAGAAGGAAAACACCAATCTTACTGTTTAATGGGCCTTTTCCCCCCTTCCAAGCGTACTACATATCTGT AAAAA AATGTAACACTTTgt                              ]
[+] EMBL BM626939             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ccGCGGACATCGTGGACGTACCGACGGTGCGCAATTTGGTGCGCATATTTTCCGTCTTTGTGCTGGAGTATTTGAACGTGCCGTTATGACAGTCGCATGATGAATTGTAGAACCAATGCAGCACCATTCCTTTCGGGGCGGTACGCGTACTTACACGCTCGGGGCT AATTTTATCTCTTGTTTTTTGAGCGATTTTTAAATAATTCATTACAGTTTCTTATCGTGAAGGAAGCAAA  AAAAAAAGAAGGAAAACACCAATCTTACTGTTTAATGGGCCTTTTCCCCCCTTCTAAGCGTACTACATATCTGTAAAAAA AATGTAACACTTTTGTGCAATAAATACAAATTGTTGAACAATCAT]


>consensus_8510#0 TTCCGGGAAGGAGGGTCACAATCGGTTCGTTTGTTTAGCGATAGAACCTACCCTCAAAAG CGGTACGGTGCGGTCGTTCTTCTAATCGCACCTTTTCGTAACCGCATATCAATCAAGAAA GGGGAAGGGGTTAAAGGTGTGCTTGCAATGCCACGCGCTACATATCATATTGCTCGTGTT TACGATAGCGCTTCTCAGCACAAATGGCCAGAACGCGAATTTGAAGAATGCACAAAAGCA CACCGCCACCCCGATGTCGGTGGGCGGCCTTCAGCGGGTGGCCGTCGATCCGATGACGCT TCTGCCCGAGGCCTTGGAAAATCTGCTCGTCGAGCGGGTGGTCGGATCGCCAGGCCACGA GAATGTGAAAAACTACATCGTGCAGCAGATGCAGCGGCATGGCTACACCGTCGAGCTGGA CGAGTTCGATGAAACCGTGCCCATCCTGGGGAAGTTACGGTTTGCCAACGTGATCGCGTC GCTCAACCCCAAAGCTACCCGGAATCTGGTGCTGGCCTGCCACTACGACAGTAAATACTT CCCCGGCCAACAGTTTATCGGAGCGACCGATTCGTCCGTGCCGTGCGCGATGCTCATTAC GATGGCGTCCCTGCTCGCTCCCCACCTCGAGTCCATCAAAGCCAGGACGGACCTGAACCT GCAGTTCATTTTCTTCGACGGCGAGGAAGCATTCCAGAACTGGTCCGAGCGAGATTCGCT CTACGGTGCACGCCACCTGGCCGAACGGATGGAGCGCGATGGTACGCTGCAACGGATGGA CATGCTCGTGCTGCTCGATCTGCTCGGTACGCCCGAGCCAACCTTTTACAGCTACTTTGC CGAGACGGAAAACTGGTACGTGCAGCTAATTTCCGCCGAACGGCGGCTGGACGAGCTGGG CCATCTGGAGAACTACAGTACGAGCAGCGTGTCGCCCACCCAGAGAACGATCGCGTACTT TAAGCCCGCCTCAGTGTTTGCGGGCATCGAGGATGATCACATACCGTTCCTAAGGCGGGG CGTGCCCATCCTGCACGTCATTCCCAGCCCCTTCCCCGAGGTTTGGCACAAGCTGGAAGA TAATGCGGACATCGTGGACGTACCGACGGTGCGCAATTTGGTGCGCATATTTTCCGTCTT TGTGCTGGAGTATTTGAACGTGCCGTTATGACAGTCGCATGATGAATTGTAGAACCAATG CAGCACCATTCCTTTCGGGGCGGTACGCGTACTTACACGCTCGGGGCTAATTTTATCTCT TGTTTTTTGAGCGATTTTTAAATAATTCATTACGGTTTCTTATCGTGAAGGAAGCAAAGA AAAAAAGAAGGAAAACACCAATCTTACTGTTTAATGGGCCTTTTCCCCCCTTCCAAGCGT ACTACATATCTGTAAAAAAAATGTAACACTTTTGTGCAATAAATACAAATTGTTGAACAA TCAT



consensusID : consensus_8510#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 658
fasta sequence
                              [CCGCCCACGCGTCCGGCGGGCGGTCGTTCTTCTAATCGCACCTTTTCGTAACCTCATATCAATCAAGAAAAGGGAAGGGGTTAAAGGTGTGCTTGCAATGCCACGCGTACATATTATACTGCTCGTGTTCACGATAGCACTTCTCAGCACAAATGGCCAGAACGCGAATTTGAAGAATGCGCAAAAGCACACCGCCACCCCGATGTCGGTGGGCGGCCTTCAGCGGGTGGCCGTCGATCCGATGACGCTTCTGCCCGAGGCCTTGGAAAATCTGCTCGTCGAGCGGGTGGTCGGAACGCCAGGCCACGAGAATGTGAAAAACTACATCGTGCAGCAGATGCAGCGGCACGGCTACACCGTCGAGTTGGACGAGTTCGATGAAACCGTGCCCATCCTGGGGAAGTTACGGTTTGCCAACGTGATCGCGTCGCTCAACCCCAAAGCTACCCGGAATCTGGTGCTGGCCTGCCACTACGACAGTAAATACTTCCCCGGCCAACAGTTTATCGGAGCGACCGATTCGTCCGTGCCGTGCGCGATGCTCATTTACGATGGCGTCCCTGCTCGCTCCCCACCTCGAGTCCATCAAAAGCCAGGACGGACCTGGAACCTGCAGTTCATTTTTCTTCGACGGCGAGGAAGCATTTCCAGAACTGGT]

[+] EMBL BM576193             [CCGCCCACGCGTCCGGCGGGCGGTCGTTCTTCTAATCGCACCTTTTCGTAACCTCATATCAATCAAGAAAAGGGAAGGGGTTAAAGGTGTGCTTGCAATGCCACGCGTACATATTATACTGCTCGTGTTCACGATAGCACTTCTCAGCACAAATGGCCAGAACGCGAATTTGAAGAATGCGCAAAAGCACACCGCCACCCCGATGTCGGTGGGCGGCCTTCAGCGGGTGGCCGTCGATCCGATGACGCTTCTGCCCGAGGCCTTGGAAAATCTGCTCGTCGAGCGGGTGGTCGGAACGCCAGGCCACGAGAATGTGAAAAACTACATCGTGCAGCAGATGCAGCGGCACGGCTACACCGTCGAGTTGGACGAGTTCGATGAAACCGTGCCCATCCTGGGGAAGTTACGGTTTGCCAACGTGATCGCGTCGCTCAACCCCAAAGCTACCCGGAATCTGGTGCTGGCCTGCCACTACGACAGTAAATACTTCCCCGGCCAACAGTTTATCGGAGCGACCGATTCGTCCGTGCCGTGCGCGATGCTCATTTACGATGGCGTCCCTGCTCGCTCCCCACCTCGAGTCCATCAAAAGCCAGGACGGACCTGGAACCTGCAGTTCATTTTTCTTCGACGGCGAGGAAGCATTTCCAGAACTGGT]


>consensus_8510#1 CCGCCCACGCGTCCGGCGGGCGGTCGTTCTTCTAATCGCACCTTTTCGTAACCTCATATC AATCAAGAAAAGGGAAGGGGTTAAAGGTGTGCTTGCAATGCCACGCGTACATATTATACT GCTCGTGTTCACGATAGCACTTCTCAGCACAAATGGCCAGAACGCGAATTTGAAGAATGC GCAAAAGCACACCGCCACCCCGATGTCGGTGGGCGGCCTTCAGCGGGTGGCCGTCGATCC GATGACGCTTCTGCCCGAGGCCTTGGAAAATCTGCTCGTCGAGCGGGTGGTCGGAACGCC AGGCCACGAGAATGTGAAAAACTACATCGTGCAGCAGATGCAGCGGCACGGCTACACCGT CGAGTTGGACGAGTTCGATGAAACCGTGCCCATCCTGGGGAAGTTACGGTTTGCCAACGT GATCGCGTCGCTCAACCCCAAAGCTACCCGGAATCTGGTGCTGGCCTGCCACTACGACAG TAAATACTTCCCCGGCCAACAGTTTATCGGAGCGACCGATTCGTCCGTGCCGTGCGCGAT GCTCATTTACGATGGCGTCCCTGCTCGCTCCCCACCTCGAGTCCATCAAAAGCCAGGACG GACCTGGAACCTGCAGTTCATTTTTCTTCGACGGCGAGGAAGCATTTCCAGAACTGGT



consensusID : consensus_8510#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 488
fasta sequence
                              [AATTCCCCGAGGTTAATTTGAAGAATGCGCAAAAGCACACCGCCACCCCGATGTCGGTGGGCGGCCTTCAGCGGGTGGCCGTCGATCCGATGACGCTTCTGCCCGAGGCCTTGGAAAATCTGCTCGTCGAGCGGGTCGTCGGAACGCCAGGCCACGAGATTGTGAAAAACTACATAGTGCAGCAGATGCAGCGGCACGGCTACACCGTCGAGTTGGACGAGTTCGATGAAACCGTGCCTATCCTGGGGAAGTTACGGTTTGCCAACGTGATCGCGTCGCTCAACCCCAAAGCTACCCGGAATCTGGTGCTGGCCTGCCACTACGACAGTAAATACTTCCCCGGCAACAGTTTATCGGAGCGACCGATTCGTCCGTGCCGTGCGCGATGCTCATTACGATGGCGTCCCTGCTCGCTCCCCACTCGAGTCCATCAAAGCCAGGACGGACCTGAACCTGCAGTTCATTTTCTTCGACGGCGAGGAAGCATT]

[+] EMBL AL694197             [AATTCCCCGAGGTTAATTTGAAGAATGCGCAAAAGCACACCGCCACCCCGATGTCGGTGGGCGGCCTTCAGCGGGTGGCCGTCGATCCGATGACGCTTCTGCCCGAGGCCTTGGAAAATCTGCTCGTCGAGCGGGTCGTCGGAACGCCAGGCCACGAGATTGTGAAAAACTACATAGTGCAGCAGATGCAGCGGCACGGCTACACCGTCGAGTTGGACGAGTTCGATGAAACCGTGCCTATCCTGGGGAAGTTACGGTTTGCCAACGTGATCGCGTCGCTCAACCCCAAAGCTACCCGGAATCTGGTGCTGGCCTGCCACTACGACAGTAAATACTTCCCCGGCAACAGTTTATCGGAGCGACCGATTCGTCCGTGCCGTGCGCGATGCTCATTACGATGGCGTCCCTGCTCGCTCCCCACTCGAGTCCATCAAAGCCAGGACGGACCTGAACCTGCAGTTCATTTTCTTCGACGGCGAGGAAGCATT]


>consensus_8510#2 AATTCCCCGAGGTTAATTTGAAGAATGCGCAAAAGCACACCGCCACCCCGATGTCGGTGG GCGGCCTTCAGCGGGTGGCCGTCGATCCGATGACGCTTCTGCCCGAGGCCTTGGAAAATC TGCTCGTCGAGCGGGTCGTCGGAACGCCAGGCCACGAGATTGTGAAAAACTACATAGTGC AGCAGATGCAGCGGCACGGCTACACCGTCGAGTTGGACGAGTTCGATGAAACCGTGCCTA TCCTGGGGAAGTTACGGTTTGCCAACGTGATCGCGTCGCTCAACCCCAAAGCTACCCGGA ATCTGGTGCTGGCCTGCCACTACGACAGTAAATACTTCCCCGGCAACAGTTTATCGGAGC GACCGATTCGTCCGTGCCGTGCGCGATGCTCATTACGATGGCGTCCCTGCTCGCTCCCCA CTCGAGTCCATCAAAGCCAGGACGGACCTGAACCTGCAGTTCATTTTCTTCGACGGCGAG GAAGCATT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8510#1      -----------------------------------------------CCGCCCACGCGTC 13
consensus_8510#2      ------------------------------------------------------------
consensus_8510#0      TTCCGGGAAGGAGGGTCACAATCGGTTCGTTTGTTTAGCGATAGAACCTACCCTCAAAAG 60
                                                                                  

consensus_8510#1      CGGC---GGGCGGTCGTTCTTCTAATCGCACCTTTTCGTAACCTCATATCAATCAAGAAA 70
consensus_8510#2      ------------------------------------------------------------
consensus_8510#0      CGGTACGGTGCGGTCGTTCTTCTAATCGCACCTTTTCGTAACCGCATATCAATCAAGAAA 120
                                                                                  

consensus_8510#1      AGGGAAGGGGTTAAAGGTGTGCTTGCAATGCCACGCG-TACATATTATACTGCTCGTGTT 129
consensus_8510#2      ------------------------------------------------------------
consensus_8510#0      GGGGAAGGGGTTAAAGGTGTGCTTGCAATGCCACGCGCTACATATCATATTGCTCGTGTT 180
                                                                                  

consensus_8510#1      CACGATAGCACTTCTCAGCACAAATGGCCAGAACGCGAATTTGAAGAATGCGCAAAAGCA 189
consensus_8510#2      ----------------------AATTCCCCGAG-GTTAATTTGAAGAATGCGCAAAAGCA 37
consensus_8510#0      TACGATAGCGCTTCTCAGCACAAATGGCCAGAACGCGAATTTGAAGAATGCACAAAAGCA 240
                                            ***  ** **  *  ************** ********

consensus_8510#1      CACCGCCACCCCGATGTCGGTGGGCGGCCTTCAGCGGGTGGCCGTCGATCCGATGACGCT 249
consensus_8510#2      CACCGCCACCCCGATGTCGGTGGGCGGCCTTCAGCGGGTGGCCGTCGATCCGATGACGCT 97
consensus_8510#0      CACCGCCACCCCGATGTCGGTGGGCGGCCTTCAGCGGGTGGCCGTCGATCCGATGACGCT 300
                      ************************************************************

consensus_8510#1      TCTGCCCGAGGCCTTGGAAAATCTGCTCGTCGAGCGGGTGGTCGGAACGCCAGGCCACGA 309
consensus_8510#2      TCTGCCCGAGGCCTTGGAAAATCTGCTCGTCGAGCGGGTCGTCGGAACGCCAGGCCACGA 157
consensus_8510#0      TCTGCCCGAGGCCTTGGAAAATCTGCTCGTCGAGCGGGTGGTCGGATCGCCAGGCCACGA 360
                      *************************************** ****** *************

consensus_8510#1      GAATGTGAAAAACTACATCGTGCAGCAGATGCAGCGGCACGGCTACACCGTCGAGTTGGA 369
consensus_8510#2      GATTGTGAAAAACTACATAGTGCAGCAGATGCAGCGGCACGGCTACACCGTCGAGTTGGA 217
consensus_8510#0      GAATGTGAAAAACTACATCGTGCAGCAGATGCAGCGGCATGGCTACACCGTCGAGCTGGA 420
                      ** *************** ******************** *************** ****

consensus_8510#1      CGAGTTCGATGAAACCGTGCCCATCCTGGGGAAGTTACGGTTTGCCAACGTGATCGCGTC 429
consensus_8510#2      CGAGTTCGATGAAACCGTGCCTATCCTGGGGAAGTTACGGTTTGCCAACGTGATCGCGTC 277
consensus_8510#0      CGAGTTCGATGAAACCGTGCCCATCCTGGGGAAGTTACGGTTTGCCAACGTGATCGCGTC 480
                      ********************* **************************************

consensus_8510#1      GCTCAACCCCAAAGCTACCCGGAATCTGGTGCTGGCCTGCCACTACGACAGTAAATACTT 489
consensus_8510#2      GCTCAACCCCAAAGCTACCCGGAATCTGGTGCTGGCCTGCCACTACGACAGTAAATACTT 337
consensus_8510#0      GCTCAACCCCAAAGCTACCCGGAATCTGGTGCTGGCCTGCCACTACGACAGTAAATACTT 540
                      ************************************************************

consensus_8510#1      CCCCGGCCAACAGTTTATCGGAGCGACCGATTCGTCCGTGCCGTGCGCGATGCTCATTTA 549
consensus_8510#2      CCCCGGC-AACAGTTTATCGGAGCGACCGATTCGTCCGTGCCGTGCGCGATGCTCATT-A 395
consensus_8510#0      CCCCGGCCAACAGTTTATCGGAGCGACCGATTCGTCCGTGCCGTGCGCGATGCTCATT-A 599
                      ******* ************************************************** *

consensus_8510#1      CGATGGCGTCCCTGCTCGCTCCCCACCTCGAGTCCATCAAAAGCCAGGACGGACCTGGAA 609
consensus_8510#2      CGATGGCGTCCCTGCTCGCTCCCCAC-TCGAGTCCATCAAA-GCCAGGACGGACCTG-AA 452
consensus_8510#0      CGATGGCGTCCCTGCTCGCTCCCCACCTCGAGTCCATCAAA-GCCAGGACGGACCTG-AA 657
                      ************************** ************** *************** **

consensus_8510#1      CCTGCAGTTCATTTTTCTTCGACGGCGAGGAAGCATTTCCAGAACTGGT----------- 658
consensus_8510#2      CCTGCAGTTCATTTT-CTTCGACGGCGAGGAAGCATT----------------------- 488
consensus_8510#0      CCTGCAGTTCATTTT-CTTCGACGGCGAGGAAGCATT-CCAGAACTGGTCCGAGCGAGAT 715
                      *************** *********************                       

consensus_8510#1      ------------------------------------------------------------
consensus_8510#2      ------------------------------------------------------------
consensus_8510#0      TCGCTCTACGGTGCACGCCACCTGGCCGAACGGATGGAGCGCGATGGTACGCTGCAACGG 775
                                                                                  

consensus_8510#1      ------------------------------------------------------------
consensus_8510#2      ------------------------------------------------------------
consensus_8510#0      ATGGACATGCTCGTGCTGCTCGATCTGCTCGGTACGCCCGAGCCAACCTTTTACAGCTAC 835
                                                                                  

consensus_8510#1      ------------------------------------------------------------
consensus_8510#2      ------------------------------------------------------------
consensus_8510#0      TTTGCCGAGACGGAAAACTGGTACGTGCAGCTAATTTCCGCCGAACGGCGGCTGGACGAG 895
                                                                                  

consensus_8510#1      ------------------------------------------------------------
consensus_8510#2      ------------------------------------------------------------
consensus_8510#0      CTGGGCCATCTGGAGAACTACAGTACGAGCAGCGTGTCGCCCACCCAGAGAACGATCGCG 955
                                                                                  

consensus_8510#1      ------------------------------------------------------------
consensus_8510#2      ------------------------------------------------------------
consensus_8510#0      TACTTTAAGCCCGCCTCAGTGTTTGCGGGCATCGAGGATGATCACATACCGTTCCTAAGG 1015
                                                                                  

consensus_8510#1      ------------------------------------------------------------
consensus_8510#2      ------------------------------------------------------------
consensus_8510#0      CGGGGCGTGCCCATCCTGCACGTCATTCCCAGCCCCTTCCCCGAGGTTTGGCACAAGCTG 1075
                                                                                  

consensus_8510#1      ------------------------------------------------------------
consensus_8510#2      ------------------------------------------------------------
consensus_8510#0      GAAGATAATGCGGACATCGTGGACGTACCGACGGTGCGCAATTTGGTGCGCATATTTTCC 1135
                                                                                  

consensus_8510#1      ------------------------------------------------------------
consensus_8510#2      ------------------------------------------------------------
consensus_8510#0      GTCTTTGTGCTGGAGTATTTGAACGTGCCGTTATGACAGTCGCATGATGAATTGTAGAAC 1195
                                                                                  

consensus_8510#1      ------------------------------------------------------------
consensus_8510#2      ------------------------------------------------------------
consensus_8510#0      CAATGCAGCACCATTCCTTTCGGGGCGGTACGCGTACTTACACGCTCGGGGCTAATTTTA 1255
                                                                                  

consensus_8510#1      ------------------------------------------------------------
consensus_8510#2      ------------------------------------------------------------
consensus_8510#0      TCTCTTGTTTTTTGAGCGATTTTTAAATAATTCATTACGGTTTCTTATCGTGAAGGAAGC 1315
                                                                                  

consensus_8510#1      ------------------------------------------------------------
consensus_8510#2      ------------------------------------------------------------
consensus_8510#0      AAAGAAAAAAAGAAGGAAAACACCAATCTTACTGTTTAATGGGCCTTTTCCCCCCTTCCA 1375
                                                                                  

consensus_8510#1      ------------------------------------------------------------
consensus_8510#2      ------------------------------------------------------------
consensus_8510#0      AGCGTACTACATATCTGTAAAAAAAATGTAACACTTTTGTGCAATAAATACAAATTGTTG 1435
                                                                                  

consensus_8510#1      ---------
consensus_8510#2      ---------
consensus_8510#0      AACAATCAT 1444
                               




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)