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Anopheles gambiae
cluster # 8513 cluster # 8513       Sequences # 10       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8513#0 length = 1730 sequences # 6  
consensus_8513#1 length = 670 sequences # 1  
consensus_8513#2 length = 630 sequences # 1  
consensus_8513#3 length = 496 sequences # 1  
consensus_8513#4 length = 175 sequences # 1  

consensusID : consensus_8513#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1730
fasta sequence
                              [CTTCAAAATGTGGCGTTGGCACGGGGTCGGCTGAAAGGGGCGCTGAAAACCGCCAACCAATCGTCGGACGATAACTCCAGCTTCGACGATAGCGAGGAAGAGTCGCAGGTCAAGCGAAAACGCATCGACGCACCGGCAATTAATCAGTCGTGCCCGTTGACGCTCTTCAACCGGTGCATCGATGTGGCCCGCTTCCGGGAAAATGCCCCGCTCTATCCCCTGTGCCGCGCATGGGTGAAGAACAACCCGCGGGAGAAAGTTGAGGAAGCGACAATGTCCGAACCTAGACGGCGCATCAAGCGCGAGCACAATCCAGATATCGTGAATCAGTTCGTGAGCGGAGAGTTGCTCGAAATAACGGAAATGCCACGGCCAGAATCGACGCAGTTGGAGCCTTTCCTTTCGGTAAAATCGGAACCGGTCGGTGACTTTGATATTGACAAGTCGTCCAAAAGCAAGGAAGAGTTGATCGAGGAGCATCGGGAGCAGTGGAAGAAAATTCGTGAATCGAGTATTGCACACAGAAAAAAGTACAACGAAGCACGGTACGGCACCAGTTTCAAGCTACTGGAAGCGTTGAAAAAGTGAAACCCTGGTCG---------GGTAATACATAGTTCGTAAC--CAGAGAGCACAGTTTATTGTGGTATATCA--AGTAAAGGCTTAAATGTACAATTCAATTCAATAAACTTAGGAATCGATGGATTTCATAACCACGTTCTATCAATTCAATTCAATAAACTTAGGAATCGATGGATTTCATAAGACGTTCTATCATTTGTTATCCATCAGAATTCTTTTGAGCACAA-CCACGCAAGGCTTACAGTTTATCACGTGTGTTTTTTCAGCCTGCTGTTTGACTAATGGAGCGAAACCATTACTAATACTCTCTTGCTTCTCTACAAAGCTATCCGCTGACCTCAGCCCATCGTTTAACACATCCTTCTCTCGTATTCGATTGATCCGTAAGCGATTCATGATCTCCCGGATGTGGTGGAATTTGTTCTTATTTTTTGCCGCTTTTTCACTGATTATCTTCGTCTTCTTTGCTGAAGCCACCGAATCACTGTTCTGTGGATGAAATGAGCGTTTTCTCACGGAAGCGCTTCCACCATCCACCCCGTTAGTAGCTGGCTCGGTTGCACGAACCGGTGTGCTGTGCACTGCTCCCGTAACATTT-AAATGAGCTTGCGCTTCCT-CGCTGCCGGTGTTCTCGCTGTTCGATTGCACTTTGCCGTTCGCCGGAGTGCAACCGCTGCTTACTATCGGATTGAACGAATCTGCTTGCAGTAGTGGCTGAAGGCGCTTCATTGCTTCATTCATGATTTTCGCTTCCCGCACTGTTTCGTAGTTCGAGCGGCTTTTGTTGCGGAATGTGACGAACGTTTCCATCGTTGCGATGCACCCATCGCACAAGCTGAACGTTTCGTCCGCCTCGGGCGTGAGATGGATTCCGACAATATTATCGATAATGCTAAGCAGGTCCGGTCGTCCAAGCGGAAACACGGCATGCACATTGACGCCACCGAAGCAGAAATGGCAATA-GGATTCCTCGTTGAGTGAGGGCACCAGCAAGTTGGAGTGCATTGCTGAAAGTTTACTTCCTTCCTGCCGTTACTCCAAAACAGCGTCCGAAACTGTTAGTTGTATAATCTCAACACGTCGCCTTACCGATATCGATGGCTGGAAAGATTCCTTCGCGTTTAATATTCAACAAACAAAGCGCACCAAACAGA]

[+] EMBL BX623602             [CTTCAAAATGTGGCGTTGGCACGGGGTCGGCTGAAAGGGGCGCTGAAAACCGCCAACCAATCGTCGGACGATAACTCCAGCTTCGACGATAGCGAGGAAGAGTCGCAGGTCAAGCGAAAACGCATCGACGCACCGGCAATTAATCAGTCGTGCCCGTTGACGCTCTTCAACCGGTGCATCGATGTGGCCCGCTTCCGGGAAAATGCCCCGCTCTATCCCCTGTGCCGCGCATGGGTGAAGAACAACCCGCGGGAGAAAGTTGAGGAAGCGACAATGTCCGAACCTAGACGGCGCATCAAGCGCGAGCACAATCCAGATATCGTGAATCAGTTCGTGAGCGGAGAGTTGCTCGAAATAACGGAAATGCCACGGCCAGAATCGACGCAGTTGGAGCCTTTCCTTTCGGTAAAATCGGAACCGGTCGGTGACTTTGATATTGACAAGTCGTCCAAAAGCAAGGAAGAGTTGATCGAGGAGCATCGGGAGCAGTGGAAGAAAATTCGTGAATCGAGTATTGCACACAGAAAAAAGTACAACGAAGCACGGTACGGCACCAGTTTCAAGCTACTGGAAGCGTTGAAAAAGTGAAACCCTGGTCG         GGTAATACATAGTTCGTAACAACAGAGAGCACAGTTTATTGTGGTATATCAAGAGTAAAGGCTTAAATGTACAATTCAATTCAATAAACTTANGAATCGATGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CNS08ZPC             [                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATTTACAAGTCGTCCAAAAGCAAGGAAGAGTTTATCGAGGAGCATCGGGAGCAGTGGAAGAAAATTCGTGAATCGAGTATTGCACACAGAAAAAAGTACAACGAAGCGCGGTACGGCACCAGTTTCAAGCTACTGGAAGCGTTGAAAAAGTGAAACCCTGGTCGGGTTGGGGTGGTAATACATAGTTCGTAACAACAGAGAGCACAGTTTATTGTGGTATATTAAGAGTAAAGGCTTAAATGTACAATTCAATTCAATAAACTTAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS09OS4             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           tttttTAAC  CACAGAGCACAGTTTATTGTGGTATATCA  AGTAAAGGCTTAAATGTACAATTCAATTCAATAAACTTAGGAATCGATGGATTTCATAACCACGTTCTATCAATTCAATTCAATAAACTTAGGAATCGATGGATTTCATAAGACGTTCTATCATTTGTTATCCATCAGAATTCTTTTGAGCACAA CCACGCAAGGCTTACAGTTTATCACGTGTGTTTTTTCAGCCTGCTGTTTGACTAATGGAGCGAAACCATTACTAATACTCTCTTGCTTCTCTACAAAGCTATCCGCTGACCTCAGCCCATCGTTTAACACATCCTTCTCTCGTATTCGATTGATCCGTAAGCGATTCATGATCTCCCGGATGTGGTGGAATTTGTTCTTATTTTTTGCCGCTTTTTCACTGATTATCTTCGTCTTCTTTGCTGAAGCCACCGAATCACTGTTCTGTGGATGAAATGAGCGTTTTCTCACGGAAGCGCTTCCACCATCCACCCCGTTAGTAGCTGGCTCGGTTGCACGAACCGGTGTGCTGTGCACTGCTCCCGTAACATTT AAATGAGCTTGCGCTTCCT CGCTGCCGGTGTTCTCGCTGTTCGATTGCACTTTGCCGTTCGCCGGAGTGCAACCGCTGCTTACTATCGGATTGAACGAATCTGCTTGCAGTAGTGGCTGAAGGCGCTTCATTGCTTCATTCATGATTTTCGCTTCCCGCACTGTTTCGTAGTTCGAGCGGCTTTTGTTGCGGAATGTGACGAACGTTTCCATCGTTGCGATGCACCCATCGCACAAGCTGAACGTTTCGTCCGCCTCGGGCGTGAGAAGGATTCCGACAATATTATCGATAATGCTAAGCAGGTCCGGTCGTCCAAGCGGAAACACGGCATGCACATTGACGCCACCCAAGCAGAAATGGCAATA GGATT CTCGTTGAGTt                                                                                                                                                                              ]
[+] EMBL CNS08HAT             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTATTGTGGTATATCA  AGTAAAGGCTTAAATGTACAATTCAATTCAATAAACTTAGGAATCGATGGATTTCATAA GACGTTCTATCAATTCAATTCAATAAACTTAGGAATCGATGGATTTCATAAGACGTTCTATCATTTGTTATCCATCAGAATTCTTTTGAGCACAA CCACGCAAGGCTTACAGTTTATCACGTGTGTTTTTTCAGCCTGCTGTTTGACTAATGGAGCGAAACCATTACTAATACTCTCTTGCTTCTCTACAAAGCTATCCGCTGACCTCAGCCCATCGTTTAACACATCCTTCTCTCGTATTCGATTGATCCGTAAGCGATTCATGATCTCCCGGATGTGGTGGAATTTGTTCTTATTTTTTGCCGCTTTTTCACTGATTATCTTCGTCTTCTTTGCTGAAGCCACCGAATCACTGTTCTGTGGATGAAATGAGCGTTTTCTCACGGAAGCGCTTCCACCATCCACCCCGTTAGTAGCTGGCTCGGTTGCACGAACCGGTGTGCTGTGC CTGCTCCCGTAACATTT AAATGAGCTTGCGCTTCCT CGCTGCCGGTGTTCTCGCTGTTCGATTGCACTTTGCCGTTCGCCGGAGTGCAACCGCTGCTTACTATCGGATTGAACGAATCTGCTTGCAGTAGTGGCTGAAGGCGCTTCATTGCTTCATTCATGATTTTCGCTTCCCGCACTGTTTCGTAGTTCGAGCGGCTTTTGTTGCGGAATGTGACGAACGTTTCCATCGTTGCGATGCACCCATCGCACAAGCTGAACGTTTCGTCCGCCTCGGGGGTGAGAGGGATTCCGACAATATTATCGATAATGCTAAGCAGGTCCGGTCGTCCAAGCGGAAACACGGCATGCACATTGACGCCACCGAAGCAGAAATGGCAATAGGGATTCCTCGTTGAGTGAGGG                                                                                                                                                                          ]
[-] EMBL CNS09OS3             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GAGCACAACCCACGCAAGGCTTACAGTTTATCACGTGTGTTTTTTCAGCCTGCTGTTTGACTAATGGAGCGAAACCATTACTAATACTCTCTTGCTTCTCTACAAAGCTATCCGCTGACCTCAGCCCATCGTTTAACACATCCTTCTCTCGTATTCGATTGATCCGTAAGCGATTCATGATCTCCCGGATGTGGTGGAATTTGTTCTTATTTTTTGCCGCTTTTTCACTGATTATCTTCGTCTTCTTTGCTGAAGCCACCGAATCACTGTTCTGTGGATGAAATGAGCGTTTTCTCACGGAAGCGCTTCCACCATCCACCCCGTTAGTAGCTGGCTCGGTTGCACGAACCGGTGTGCTGTGCACTGCTCCCGTAACATTT AAATGAGCTTGCGCTTCCT CGCTGCCGGTGTTCTCGCTGTTCGATTGCACTTTGCCGTTCGCCGGAGTGCAACCGCTGCTTACTATCGGATTGAACGAATCTGCTTGCAGTAGTGGCTGAAGGCGCTTCATTGCTTCATTCATGATTTTCGCTTCCCGCACTGTTTCGTAGTTCGAGCGGCTTTTGTTGCGGAATGTGACGAACGTTTCCATCGTTGCGATGCACCCATCGCACAAGCTGAACGTTTCGTCCGCCTCGGGCGTGAGATGGATTCCGACAATATTATCGATAATGCTAAGCAGGTCCGGTCGTCCAAGCGGAAACACGGCATGCACATTGACGCCACCGAAGCAGAAATGGCAATA GGATTCCTCGTTGAGTGAGGGCACCAGCAAGTTGGAGTGCATTGCTGAAAGTTTACTTCCTTCCTGCCGTTACTCCAAAACAGCGTCCGAAACTGTTAGTTGTATAATCTCAACACGTCGCCTTACCGA                                                              ]
[-] EMBL CNS08HAS             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CAGTTTATCACGTGTGTTTTTTCAGCCTGCTGTTTGACTAATGGAGCGAAACCATTACTAATACTCTCTTGCTTCTCTACAAAGCTATCCGCTGACCTCAGCCCATCGTTTAACACATCCTTCTCTCGTATTCGATTGATCCGTAAGCGATTCATGATCTCCCGGATGTGGTGGAATTTGTTCTTATTTTTTGCCGCTTTTTCACTGATTATCTTCGTCTTCTTTGCTGAAGCCACCGAATCACTGTTCTGTGGATGAAATGAGCGTTTTCTCACGGAAGCGCTTCCACCATCCACCCCGTTAGTAGCTGGCTCGGTTGCACGAACCGGTGTGCTGTGCACTGCTCCCGTAACATTTAAAATGAG TTGCGCTTCCTGCGCTGCCGGTGTTCTCGCTGTTCGATTGCACTTTGCCGTTCGCCGGAGTGCAACCGCTGCTTACTATCGGATTGAACGAATCTGCTTGCAGTAGTGGCTGAAGGCGCTTCATTGCTTCATTCATGATTTTCGCTTCCCGCACTGTTTCGTAGTTCGAGCGGCTTTTGTTGCGGAATGTGACGAACGTTTCCATCGTTGCGATGCACCCATCGCACAAGCTGAACGTTTCGTCCGCCTCGGGCGTGAGATGGATTCCGACAATATTATCGATAATGCTAAGCAGGTCCGGTCGTCCAAGCGGAAACACGGCATGCACATTGACGCCACCGAAGCAGAAATGGCAATA GGATTCCTCGTTGAGTGAGGGCACCAGCAAGTTGGAGTGCATTGCTGAAAGTTTACTTCCTTCCTGCCGTTACTCCAAAACAGCGTCCGAAACTGTTAGTTGTATAATCTCAACACGTCGCCTTACCGATATCGATGGCTGGAAAGATTCCTTCGCGTTTAATATTCAACAAACAAAGCGCACCAAACAGA]


>consensus_8513#0 CTTCAAAATGTGGCGTTGGCACGGGGTCGGCTGAAAGGGGCGCTGAAAACCGCCAACCAA TCGTCGGACGATAACTCCAGCTTCGACGATAGCGAGGAAGAGTCGCAGGTCAAGCGAAAA CGCATCGACGCACCGGCAATTAATCAGTCGTGCCCGTTGACGCTCTTCAACCGGTGCATC GATGTGGCCCGCTTCCGGGAAAATGCCCCGCTCTATCCCCTGTGCCGCGCATGGGTGAAG AACAACCCGCGGGAGAAAGTTGAGGAAGCGACAATGTCCGAACCTAGACGGCGCATCAAG CGCGAGCACAATCCAGATATCGTGAATCAGTTCGTGAGCGGAGAGTTGCTCGAAATAACG GAAATGCCACGGCCAGAATCGACGCAGTTGGAGCCTTTCCTTTCGGTAAAATCGGAACCG GTCGGTGACTTTGATATTGACAAGTCGTCCAAAAGCAAGGAAGAGTTGATCGAGGAGCAT CGGGAGCAGTGGAAGAAAATTCGTGAATCGAGTATTGCACACAGAAAAAAGTACAACGAA GCACGGTACGGCACCAGTTTCAAGCTACTGGAAGCGTTGAAAAAGTGAAACCCTGGTCGG GTAATACATAGTTCGTAACCAGAGAGCACAGTTTATTGTGGTATATCAAGTAAAGGCTTA AATGTACAATTCAATTCAATAAACTTAGGAATCGATGGATTTCATAACCACGTTCTATCA ATTCAATTCAATAAACTTAGGAATCGATGGATTTCATAAGACGTTCTATCATTTGTTATC CATCAGAATTCTTTTGAGCACAACCACGCAAGGCTTACAGTTTATCACGTGTGTTTTTTC AGCCTGCTGTTTGACTAATGGAGCGAAACCATTACTAATACTCTCTTGCTTCTCTACAAA GCTATCCGCTGACCTCAGCCCATCGTTTAACACATCCTTCTCTCGTATTCGATTGATCCG TAAGCGATTCATGATCTCCCGGATGTGGTGGAATTTGTTCTTATTTTTTGCCGCTTTTTC ACTGATTATCTTCGTCTTCTTTGCTGAAGCCACCGAATCACTGTTCTGTGGATGAAATGA GCGTTTTCTCACGGAAGCGCTTCCACCATCCACCCCGTTAGTAGCTGGCTCGGTTGCACG AACCGGTGTGCTGTGCACTGCTCCCGTAACATTTAAATGAGCTTGCGCTTCCTCGCTGCC GGTGTTCTCGCTGTTCGATTGCACTTTGCCGTTCGCCGGAGTGCAACCGCTGCTTACTAT CGGATTGAACGAATCTGCTTGCAGTAGTGGCTGAAGGCGCTTCATTGCTTCATTCATGAT TTTCGCTTCCCGCACTGTTTCGTAGTTCGAGCGGCTTTTGTTGCGGAATGTGACGAACGT TTCCATCGTTGCGATGCACCCATCGCACAAGCTGAACGTTTCGTCCGCCTCGGGCGTGAG ATGGATTCCGACAATATTATCGATAATGCTAAGCAGGTCCGGTCGTCCAAGCGGAAACAC GGCATGCACATTGACGCCACCGAAGCAGAAATGGCAATAGGATTCCTCGTTGAGTGAGGG CACCAGCAAGTTGGAGTGCATTGCTGAAAGTTTACTTCCTTCCTGCCGTTACTCCAAAAC AGCGTCCGAAACTGTTAGTTGTATAATCTCAACACGTCGCCTTACCGATATCGATGGCTG GAAAGATTCCTTCGCGTTTAATATTCAACAAACAAAGCGCACCAAACAGA



consensusID : consensus_8513#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 670
fasta sequence
                              [GGGGCCGGGTGTGGCGTGTGCCANCTGCTGGCCGGTGTACAGTGTGTTGATGAGCTGTTGGCGCGTTCCGTCGCTGGCCGGTGTTCACGCTGTTCCGNATTTTGCACTCCGTTCAGCGCCGGAGGTGGCAGTCTTGCCTGCGTCTACTTATCGGATGTTGNACGAAGTCGTGCTTGCAGTAGGTGGCTGAAGGCGCTTCAGTTGCGTNTCATTGCATGAGTGTTTCGCTTCCCGCACCTGTTTCTGTAGGTTGCGAGGCGGCTTNTTGGTTGCGGAATGTGAGCGAACGTTTCCAGTCGTTGCGAGTGCACCCATCGCAGCAAGCTGAACGTTTCGTCCGCCTAGGGCGTGAGATGGATTCCGATCATATTATCGATAATGCTAAGCAGGTCCGTCGGCCAAGCGGAAACACGGCATGCACATTGACGCCAGCGCGAAGCAGNNAGTGGCAATAGGAGTTGCCTCGTTGATGTGAGGGCATCCAGCAAGTTGGAGTGCATTGCTGAAAGTTTACTTCCTTCCAAACAGCCTCCCGAACTGTAAAGTTGTATAATCTCAACACGTCACCTTACCGATATCGATGGCTGGAAAGATTATTTCGCGTTTAATAGTTCAACAAACTAAGCGCACCAAACAGATTTCGCGCGGTTCTTTCGGTAAACCTCGGGGA]

[-] EMBL AL692964             [GGGGCCGGGTGTGGCGTGTGCCANCTGCTGGCCGGTGTACAGTGTGTTGATGAGCTGTTGGCGCGTTCCGTCGCTGGCCGGTGTTCACGCTGTTCCGNATTTTGCACTCCGTTCAGCGCCGGAGGTGGCAGTCTTGCCTGCGTCTACTTATCGGATGTTGNACGAAGTCGTGCTTGCAGTAGGTGGCTGAAGGCGCTTCAGTTGCGTNTCATTGCATGAGTGTTTCGCTTCCCGCACCTGTTTCTGTAGGTTGCGAGGCGGCTTNTTGGTTGCGGAATGTGAGCGAACGTTTCCAGTCGTTGCGAGTGCACCCATCGCAGCAAGCTGAACGTTTCGTCCGCCTAGGGCGTGAGATGGATTCCGATCATATTATCGATAATGCTAAGCAGGTCCGTCGGCCAAGCGGAAACACGGCATGCACATTGACGCCAGCGCGAAGCAGNNAGTGGCAATAGGAGTTGCCTCGTTGATGTGAGGGCATCCAGCAAGTTGGAGTGCATTGCTGAAAGTTTACTTCCTTCCAAACAGCCTCCCGAACTGTAAAGTTGTATAATCTCAACACGTCACCTTACCGATATCGATGGCTGGAAAGATTATTTCGCGTTTAATAGTTCAACAAACTAAGCGCACCAAACAGATTTCGCGCGGTTCTTTCGGTAAACCTCGGGGA]


>consensus_8513#1 GGGGCCGGGTGTGGCGTGTGCCANCTGCTGGCCGGTGTACAGTGTGTTGATGAGCTGTTG GCGCGTTCCGTCGCTGGCCGGTGTTCACGCTGTTCCGNATTTTGCACTCCGTTCAGCGCC GGAGGTGGCAGTCTTGCCTGCGTCTACTTATCGGATGTTGNACGAAGTCGTGCTTGCAGT AGGTGGCTGAAGGCGCTTCAGTTGCGTNTCATTGCATGAGTGTTTCGCTTCCCGCACCTG TTTCTGTAGGTTGCGAGGCGGCTTNTTGGTTGCGGAATGTGAGCGAACGTTTCCAGTCGT TGCGAGTGCACCCATCGCAGCAAGCTGAACGTTTCGTCCGCCTAGGGCGTGAGATGGATT CCGATCATATTATCGATAATGCTAAGCAGGTCCGTCGGCCAAGCGGAAACACGGCATGCA CATTGACGCCAGCGCGAAGCAGNNAGTGGCAATAGGAGTTGCCTCGTTGATGTGAGGGCA TCCAGCAAGTTGGAGTGCATTGCTGAAAGTTTACTTCCTTCCAAACAGCCTCCCGAACTG TAAAGTTGTATAATCTCAACACGTCACCTTACCGATATCGATGGCTGGAAAGATTATTTC GCGTTTAATAGTTCAACAAACTAAGCGCACCAAACAGATTTCGCGCGGTTCTTTCGGTAA ACCTCGGGGA



consensusID : consensus_8513#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 630
fasta sequence
                              [GCTTGGCTCGTTTGCACGAACCGGTGTGCTGTGCACTGCTCCCCGCGTAACATTTAAATGAGCTTGCGCTTCCTCGCTGCCGGTTTTCACGCTGTTCGATTTCACTCCGTTCACCGGAGTGCAACTGCTGCTCACTATCGGATTGAACGAATCTGCTTGCAGTAGTGGCTGAAGGCGCTTCATTGCTTCATTCATGATTTTCGCTTCTCGCACTGTTTCGTAGTTCGAGCGGCTTTTGTTGCGGAACGTGACGAACGTTTCCATCGTTGCGATGCACCCATCGCACAAGCTGAACGTTTCGTCCGCCTCGGGCGTGAGATGGATTCCGATCATATTATCGATAATGCTAAGCAGGTCCGGTCGGCCAAGCGGAAGCACGGCATGCACATTGGCGCCACCGAAGCAGAAATGGCAATAGGATTCCTCGTTGAGTGAGGGCACCAGCAAGTTGGAGTGCATTGCTGAAAGTTTAATTCCTTCCAAACAGCCTCGCAAACTGTAAAGTTGTATAATCTCAACACGTCGCCTTACCGATATCGATGGCTGGAAAGATTCTTTCGCGTTTAATATTCAACAAACAAAGCGCACCAAACAGATTTCGCGCGGTTCTTTCGGGCGTCTGTCGGTTTG]

[-] EMBL CNS09FK9             [GCTTGGCTCGTTTGCACGAACCGGTGTGCTGTGCACTGCTCCCCGCGTAACATTTAAATGAGCTTGCGCTTCCTCGCTGCCGGTTTTCACGCTGTTCGATTTCACTCCGTTCACCGGAGTGCAACTGCTGCTCACTATCGGATTGAACGAATCTGCTTGCAGTAGTGGCTGAAGGCGCTTCATTGCTTCATTCATGATTTTCGCTTCTCGCACTGTTTCGTAGTTCGAGCGGCTTTTGTTGCGGAACGTGACGAACGTTTCCATCGTTGCGATGCACCCATCGCACAAGCTGAACGTTTCGTCCGCCTCGGGCGTGAGATGGATTCCGATCATATTATCGATAATGCTAAGCAGGTCCGGTCGGCCAAGCGGAAGCACGGCATGCACATTGGCGCCACCGAAGCAGAAATGGCAATAGGATTCCTCGTTGAGTGAGGGCACCAGCAAGTTGGAGTGCATTGCTGAAAGTTTAATTCCTTCCAAACAGCCTCGCAAACTGTAAAGTTGTATAATCTCAACACGTCGCCTTACCGATATCGATGGCTGGAAAGATTCTTTCGCGTTTAATATTCAACAAACAAAGCGCACCAAACAGATTTCGCGCGGTTCTTTCGGGCGTCTGTCGGTTTG]


>consensus_8513#2 GCTTGGCTCGTTTGCACGAACCGGTGTGCTGTGCACTGCTCCCCGCGTAACATTTAAATG AGCTTGCGCTTCCTCGCTGCCGGTTTTCACGCTGTTCGATTTCACTCCGTTCACCGGAGT GCAACTGCTGCTCACTATCGGATTGAACGAATCTGCTTGCAGTAGTGGCTGAAGGCGCTT CATTGCTTCATTCATGATTTTCGCTTCTCGCACTGTTTCGTAGTTCGAGCGGCTTTTGTT GCGGAACGTGACGAACGTTTCCATCGTTGCGATGCACCCATCGCACAAGCTGAACGTTTC GTCCGCCTCGGGCGTGAGATGGATTCCGATCATATTATCGATAATGCTAAGCAGGTCCGG TCGGCCAAGCGGAAGCACGGCATGCACATTGGCGCCACCGAAGCAGAAATGGCAATAGGA TTCCTCGTTGAGTGAGGGCACCAGCAAGTTGGAGTGCATTGCTGAAAGTTTAATTCCTTC CAAACAGCCTCGCAAACTGTAAAGTTGTATAATCTCAACACGTCGCCTTACCGATATCGA TGGCTGGAAAGATTCTTTCGCGTTTAATATTCAACAAACAAAGCGCACCAAACAGATTTC GCGCGGTTCTTTCGGGCGTCTGTCGGTTTG



consensusID : consensus_8513#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 496
fasta sequence
                              [TTTTTTTTTTTTTTTCTAATTGTGGTATATTAAGAGTAAAGGCTTAAATGTACAATTCAATTCAATAAACTTAGGAATCGATGGATTTCATAAGACGTTCTATCATTTGTTATCCATCAGAATTCTTTTGAGCACAACCACGCAAGGCTTACAGTTTATCACGTGTGTTTTTTCAGCCTGCTGTTTGACTAATGGAGCGAAACCATTACTAATACTCTCTTGCTTCTCTACAAAGCTATCCGCTGACCTCAGCCCATCGTTGAACACATCCTTCTCTCGTATTCGATTGATCCGTAAGCGATTCATGATCTCCCGGATGTGGGGGAATTTGTTCTTATTTTTTGCCGCTTTATCACTGATTATCTTTGTCTTCTTTGCTGAAGCCACCAAATCAGTTTTCTGTGCATGAAATGAGCGTTTTCTCACGGAAGAGCTTCCACCATCCACCCCGTTAGTAGCTGGCTCGTTTGCACGAACCGGTGTGCTGTGCACTGCT]

[+] EMBL CNS09FKA             [TTTTTTTTTTTTTTTCTAATTGTGGTATATTAAGAGTAAAGGCTTAAATGTACAATTCAATTCAATAAACTTAGGAATCGATGGATTTCATAAGACGTTCTATCATTTGTTATCCATCAGAATTCTTTTGAGCACAACCACGCAAGGCTTACAGTTTATCACGTGTGTTTTTTCAGCCTGCTGTTTGACTAATGGAGCGAAACCATTACTAATACTCTCTTGCTTCTCTACAAAGCTATCCGCTGACCTCAGCCCATCGTTGAACACATCCTTCTCTCGTATTCGATTGATCCGTAAGCGATTCATGATCTCCCGGATGTGGGGGAATTTGTTCTTATTTTTTGCCGCTTTATCACTGATTATCTTTGTCTTCTTTGCTGAAGCCACCAAATCAGTTTTCTGTGCATGAAATGAGCGTTTTCTCACGGAAGAGCTTCCACCATCCACCCCGTTAGTAGCTGGCTCGTTTGCACGAACCGGTGTGCTGTGCACTGCT]


>consensus_8513#3 TTTTTTTTTTTTTTTCTAATTGTGGTATATTAAGAGTAAAGGCTTAAATGTACAATTCAA TTCAATAAACTTAGGAATCGATGGATTTCATAAGACGTTCTATCATTTGTTATCCATCAG AATTCTTTTGAGCACAACCACGCAAGGCTTACAGTTTATCACGTGTGTTTTTTCAGCCTG CTGTTTGACTAATGGAGCGAAACCATTACTAATACTCTCTTGCTTCTCTACAAAGCTATC CGCTGACCTCAGCCCATCGTTGAACACATCCTTCTCTCGTATTCGATTGATCCGTAAGCG ATTCATGATCTCCCGGATGTGGGGGAATTTGTTCTTATTTTTTGCCGCTTTATCACTGAT TATCTTTGTCTTCTTTGCTGAAGCCACCAAATCAGTTTTCTGTGCATGAAATGAGCGTTT TCTCACGGAAGAGCTTCCACCATCCACCCCGTTAGTAGCTGGCTCGTTTGCACGAACCGG TGTGCTGTGCACTGCT



consensusID : consensus_8513#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 175
fasta sequence
                              [TAGCCAAACGGAGAAGCCTCATCAATTCGGACGAAAAGCGTAAAGCGCTTCAAAATGTGGCCCGCTTCCGGGAAAATGCCCCGCTCTATCCCCTGTGCCGCGCATGGGTGAAGAACAACCCGCGGGAGAAGGTTGAAGAAGCGACAATGTCCGCAACCGCAGACGGCGCATCAAG]

[+] EMBL CNS08ZPB             [TAGCCAAACGGAGAAGCCTCATCAATTCGGACGAAAAGCGTAAAGCGCTTCAAAATGTGGCCCGCTTCCGGGAAAATGCCCCGCTCTATCCCCTGTGCCGCGCATGGGTGAAGAACAACCCGCGGGAGAAGGTTGAAGAAGCGACAATGTCCGCAACCGCAGACGGCGCATCAAG]


>consensus_8513#4 TAGCCAAACGGAGAAGCCTCATCAATTCGGACGAAAAGCGTAAAGCGCTTCAAAATGTGG CCCGCTTCCGGGAAAATGCCCCGCTCTATCCCCTGTGCCGCGCATGGGTGAAGAACAACC CGCGGGAGAAGGTTGAAGAAGCGACAATGTCCGCAACCGCAGACGGCGCATCAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8513#1      ------------------------------------------------------------
consensus_8513#2      ------------------------------------------------------------
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      CTTCAAAATGTGGCGTTGGCACGGGGTCGGCTGAAAGGGGCGCTGAAAACCGCCAACCAA 60
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      ------------------------------------------------------------
consensus_8513#2      ------------------------------------------------------------
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      TCGTCGGACGATAACTCCAGCTTCGACGATAGCGAGGAAGAGTCGCAGGTCAAGCGAAAA 120
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      ------------------------------------------------------------
consensus_8513#2      ------------------------------------------------------------
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      CGCATCGACGCACCGGCAATTAATCAGTCGTGCCCGTTGACGCTCTTCAACCGGTGCATC 180
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      ------------------------------------------------------------
consensus_8513#2      ------------------------------------------------------------
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      GATGTGGCCCGCTTCCGGGAAAATGCCCCGCTCTATCCCCTGTGCCGCGCATGGGTGAAG 240
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      ------------------------------------------------------------
consensus_8513#2      ------------------------------------------------------------
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      AACAACCCGCGGGAGAAAGTTGAGGAAGCGACAATGTCCGAACCTAGACGGCGCATCAAG 300
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      ------------------------------------------------------------
consensus_8513#2      ------------------------------------------------------------
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      CGCGAGCACAATCCAGATATCGTGAATCAGTTCGTGAGCGGAGAGTTGCTCGAAATAACG 360
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      ------------------------------------------------------------
consensus_8513#2      ------------------------------------------------------------
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      GAAATGCCACGGCCAGAATCGACGCAGTTGGAGCCTTTCCTTTCGGTAAAATCGGAACCG 420
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      ------------------------------------------------------------
consensus_8513#2      ------------------------------------------------------------
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      GTCGGTGACTTTGATATTGACAAGTCGTCCAAAAGCAAGGAAGAGTTGATCGAGGAGCAT 480
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      ------------------------------------------------------------
consensus_8513#2      ------------------------------------------------------------
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      CGGGAGCAGTGGAAGAAAATTCGTGAATCGAGTATTGCACACAGAAAAAAGTACAACGAA 540
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      ------------------------------------------------------------
consensus_8513#2      ------------------------------------------------------------
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      GCACGGTACGGCACCAGTTTCAAGCTACTGGAAGCGTTGAAAAAGTGAAACCCTGGTCGG 600
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      ------------------------------------------------------------
consensus_8513#2      ------------------------------------------------------------
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      GTAATACATAGTTCGTAACCAGAGAGCACAGTTTATTGTGGTATATCAAGTAAAGGCTTA 660
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      ------------------------------------------------------------
consensus_8513#2      ------------------------------------------------------------
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      AATGTACAATTCAATTCAATAAACTTAGGAATCGATGGATTTCATAACCACGTTCTATCA 720
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      ------------------------------------------------------------
consensus_8513#2      ------------------------------------------------------------
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      ATTCAATTCAATAAACTTAGGAATCGATGGATTTCATAAGACGTTCTATCATTTGTTATC 780
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      ------------------------------------------------------------
consensus_8513#2      ------------------------------------------------------------
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      CATCAGAATTCTTTTGAGCACAACCACGCAAGGCTTACAGTTTATCACGTGTGTTTTTTC 840
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      ------------------------------------------------------------
consensus_8513#2      ------------------------------------------------------------
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      AGCCTGCTGTTTGACTAATGGAGCGAAACCATTACTAATACTCTCTTGCTTCTCTACAAA 900
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      ------------------------------------------------------------
consensus_8513#2      ------------------------------------------------------------
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      GCTATCCGCTGACCTCAGCCCATCGTTTAACACATCCTTCTCTCGTATTCGATTGATCCG 960
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      ------------------------------------------------------------
consensus_8513#2      ------------------------------------------------------------
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      TAAGCGATTCATGATCTCCCGGATGTGGTGGAATTTGTTCTTATTTTTTGCCGCTTTTTC 1020
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      ------------------------------------------------------------
consensus_8513#2      ------------------------------------------------------------
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      ACTGATTATCTTCGTCTTCTTTGCTGAAGCCACCGAATCACTGTTCTGTGGATGAAATGA 1080
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      -------------------------------------------------GGGGCCGGGTG 11
consensus_8513#2      ------------------------------------------GCTTGGCTCGTTTGCACG 18
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      GCGTTTTCTCACGGAAGCGCTTCCACCATCCACCCCGTTAGTAGCTGGCTCGGTTGCACG 1140
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      TGGCG-TGTGCCANCTGCTGGCCGGTGTACAGTGTGTTGATGAGCTGTTGGCGCGTTCCG 70
consensus_8513#2      AACCGGTGTGCTGTGCACTGCTCCCCGCGTAACATTTAAATGAGCT-----TGCGCTTCC 73
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      AACCGGTGTGCTGTGCACTGCTCC---CGTAACATTTAAATGAGCT-----TGCGCTTCC 1192
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      TCGCTGGCCGGTGTTCACGCTGTTCCGNATTTTGCACTCCGTTCAGCGCCGGAGGTGGCA 130
consensus_8513#2      TCGCTG-CCGGTTTTCACGCTGTTC--GATTT--CACTCCGTTCA---CCGGAGT--GCA 123
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      TCGCTG-CCGGTGTTCTCGCTGTTC--GATTG--CACTTTGCCGTTCGCCGGAGT--GCA 1245
consensus_8513#3      ------------------------------------------------------------
                                                                                  

consensus_8513#1      GTCTTGCCTGCGTCTACTTATCGGATGTTGNACGAAGTCGTGCTTGCAGTAGGTGGCTGA 190
consensus_8513#2      A------CTGCTGCTCACTATCGGAT--TGAACGAATC--TGCTTGCAGTAG-TGGCTGA 172
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      A------CCGCTGCTTACTATCGGAT--TGAACGAATC--TGCTTGCAGTAG-TGGCTGA 1294
consensus_8513#3      -------------TTTTTTTTTTTTTTTCTAATTGTGGTATATTAAGAGTAAAGGCTTAA 47
                                                                                  

consensus_8513#1      AGGCGCTTCAGTTGCGTNTCATTGCATGAGTGTTTCGCTTCCCGCACCTGTTTCT--GTA 248
consensus_8513#2      AGGCGCTTCATT---GCTTCATT-CATGATT--TTCGCTTCTCGCAC-TGTTTC---GTA 222
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      AGGCGCTTCATT---GCTTCATT-CATGATT--TTCGCTTCCCGCAC-TGTTTC---GTA 1344
consensus_8513#3      ATGTACAATTCAATTCAATAAACTTAGGAATCGATGGATTTCATAAGACGTTCTATCATT 107
                                                                                  

consensus_8513#1      GGTTGCGAGGCGGCTTNTTGGTTGCGGAATGTGAGCGAACGTTTCCAGTCGTTGCGAGTG 308
consensus_8513#2      GTTCG---AGCGGCTTTT--GTTGCGGAACGTGA-CGAACGTTTCCA-TCGTTGCGA-TG 274
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      GTTCG---AGCGGCTTTT--GTTGCGGAATGTGA-CGAACGTTTCCA-TCGTTGCGA-TG 1396
consensus_8513#3      TGTTATCCATCAGAATTCTTTTGAGCACAACCACGCAAGGCTTACAGTTTATCACGTGTG 167
                                                                                  

consensus_8513#1      CACCCATCGCAGCAAGCTGAACGTTTCGTCCGCCTAGGGCGTGAGATGGATTCCGATCAT 368
consensus_8513#2      CACCCATCGCA-CAAGCTGAACGTTTCGTCCGCCTCGGGCGTGAGATGGATTCCGATCAT 333
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      CACCCATCGCA-CAAGCTGAACGTTTCGTCCGCCTCGGGCGTGAGATGGATTCCGACAAT 1455
consensus_8513#3      T---TTTTTCAGCCTGCTGTTTGACTAATGGAGCGAAACCATTACTAATACTCTCTTGCT 224
                                                                                  

consensus_8513#1      ATTATCGATAATGCTAAGCAGGTCCG-TCGGCCAAGCGG-AAACACGGCATGCACATTGA 426
consensus_8513#2      ATTATCGATAATGCTAAGCAGGTCCGGTCGGCCAAGCGG-AAGCACGGCATGCACATTGG 392
consensus_8513#4      ----------------------------TAGCCAAACGG-AGAAGC------CTCATCAA 25
consensus_8513#0      ATTATCGATAATGCTAAGCAGGTCCGGTCGTCCAAGCGG-AAACACGGCATGCACATTGA 1514
consensus_8513#3      TCTCTACAAAGCTATCCGCTGACC---TCAGCCCATCGTTGAACACATCCTTCTCTCGTA 281
                                                     ** * **       *      * *     

consensus_8513#1      CGCCAGCGCGAAGCAGNNAGTGGCAATAGGAGTTGCCTCGTTGATGTGAGGGCAT-CCAG 485
consensus_8513#2      CGCCACCG--AAGCAGAAA-TGGCAATAGGA--TTCCTCGTTGA-GTGAGGGCA--CCAG 444
consensus_8513#4      TTCGGACGAAAAGCGTAAAGCG-CTTCAAAATGTGGCCCGCTTCCGGGAAAATGC-CCCG 83
consensus_8513#0      CGCCACCG--AAGCAGAAA-TGGCAATAGGA--TTCCTCGTTGA-GTGAGGGCA--CCAG 1566
consensus_8513#3      TTCGATTG---ATCCGTAAGCG-ATTCATGATCTCCCGGATGTGGGGGAATTTGTTCTTA 337
                        *    *   * *    *  *     *  *  *  *        * **       *   

consensus_8513#1      CAAGTTGGAG-TGCATTGCTGAAAGTTTACTTCCTTCC-------------AAA-CAGCC 530
consensus_8513#2      CAAGTTGGAG-TGCATTGCTGAAAGTTTAATTCCTTCC-------------AAA-CAGCC 489
consensus_8513#4      CTCTATCCCC-TGTGCCGCGCATGGGTGAA---------------------GAA-CAACC 120
consensus_8513#0      CAAGTTGGAG-TGCATTGCTGAAAGTTTACTTCCTTCCTGCCGTTACTCCAAAA-CAGCG 1624
consensus_8513#3      TTTTTTGCCGCTTTATCACTGATTATCTTTGTCTTCTTTGCTGAAGCCACCAAATCAGTT 397
                           *     *      *  *                              ** **   

consensus_8513#1      TCCCGAACTGTAAAGTTGTATAATCTCAACACGTCACCTTACCGATATCGATGGCTGGAA 590
consensus_8513#2      TCGCAAACTGTAAAGTTGTATAATCTCAACACGTCGCCTTACCGATATCGATGGCTGGAA 549
consensus_8513#4      CGCGGGA---GAAGGTTGAAGAAGC--GACAATGTCCGCAACCGCAGACGGCGCATCAAG 175
consensus_8513#0      TCCGAAACTGTTA-GTTGTATAATCTCAACACGTCGCCTTACCGATATCGATGGCTGGAA 1683
consensus_8513#3      TTCTGTGCATGAAATGAGCGTTTTCTCACGGAAGAGCTT--CCACCATCCACCCCGTTAG 455
                                  *    *      *           *    **     *         * 

consensus_8513#1      AGATTATTTCGCGTTTAATAGTTCAACAAACTAAGCGCACCAAACAGATTTCGCGCGGTT 650
consensus_8513#2      AGATTCTTTCGCGTTTAATA-TTCAACAAACAAAGCGCACCAAACAGATTTCGCGCGGTT 608
consensus_8513#4      ------------------------------------------------------------
consensus_8513#0      AGATTCCTTCGCGTTTAATA-TTCAACAAACAAAGCGCACCAAACAGA------------ 1730
consensus_8513#3      TAGCTGGCTCGTTTGCACGA-ACCGGTGTGCTGTGCACTGCT------------------ 496
                                                                                  

consensus_8513#1      CTTTCGGTAAACCTCGGGGA-- 670
consensus_8513#2      CTTTCGGGCGTCTGTCGGTTTG 630
consensus_8513#4      ----------------------
consensus_8513#0      ----------------------
consensus_8513#3      ----------------------
                                            




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)