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Anopheles gambiae
cluster # 8522 cluster # 8522       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8522#0 length = 2253 sequences # 10  
consensus_8522#1 length = 1030 sequences # 1  

consensusID : consensus_8522#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 2253
fasta sequence
                              [CGAGCTGGACATCGGTACGCTCGATCAGCTGGCCGGCTCGCTGGCGGACGAGCTGACGCTGCAGCAGAACGATTACTTCAAAGGATTTACGCAGTCGACGGCGATGCACAATCAGCCACCGCCGCCACCGTACCAGCCGCCCCAGCCCTACTCGCTGATGGCCTCGGTCGCCCCGTCCTACGGTCTCCCGCAGCAACAGAATCAGTGCCCGATTCATCGCATACAACATTGTACCTGCATGCTACAGAATAATGCTCGTGAGAGCATCTCACCGGCGTCCGGCACCGGCATGTCGCCCTCATATCCGCACAGCGAACCGTCACCTGACTACGCCATGCTAATTGGATCTCGCGTAATACAAAGAACGCCCTCGTCTAGTCCTCCGCTAACGCCAAATACGATCTGCGGATTGATAGCGCCACCGCC---GCAGCAGCAGCAGCAGCAAGATCCAACACCGCAGACGCTAATGGGTCAAGTGATGGAAGCTTTAAACAGCCAAACAAACATCGACGACATCAACATCAACGTGGAAGCGTTTCCGTGTGTGGATGAGGTGCTAAAGCACGAGCTCAGCTTGGAGGGATCGCTCGATTTCTCCAACCTGCCACTGTCGATCCACAACAGCTACGCGGCCCCGAACAATTCCAACTCGTCCGACTCGTCGT-CCGGGATCAGTGCGATGACCGCACCGTCCCCGAACCAGCAGGCGGCCGCACACAACCACGGCCAGTACGCGGCCCGCACGAGCGTCACGCCACCGTCCTGGGTGCACTAGGGAGTGTGTGATGGAGTGCGCGGTGCATGGAGCCGGTACCGATGGCGCGATGGCGCGCATCGGTCCAGTGAATTGAACGCTTTTCCGAGAGCGGACCCAGTGCCCAAGTGCTGTGAGAATGCAACCCCTTGAAAGAGAAGCCCAGCTTGCCGATTGGGGGAGGAGAAAATAAAAACAAAACACCGACGACCGAAACGACTCACGTGGGGAAGCGCTGAACAACACCATCGCACTGGTGATCGTACGTGATCGTACCGGAAACGGGGAGAACGAATGGAGGAAAAAGGCTCTGCAAAATGAGAAATTAAACAGACAAGCCA-AGCTTTTTGTTTTTAATGTACATATAGTGTATGCGAGAGCGTAAGTGTGTGTGAGGGAGAGAGAGCGAGAGAATGAATGGAGTCTCTTGTGTGAATGACAGCGAAGGCTAGTAAACAAGATATAGTGACAGGTAGAGTTGATTAGTAGTAGGAGCGATAGTAGGCGCGATAGTACGAGCGATAGTAGTAGAGTAGCGTTAGTTGCAATAGTTTTTACCTTAGTACCTACACGCAGCTATCCTTATGTCGAGCTCTAAGCTGTGTAGCGTAAGGAGCAGCTTAGTACATTGTTTTAAGATGCGCAACAACAACAAAAGTCACACGCACACACATAGTAAGCGAGAGAAGGAGTTG--TTTTTTTTGTTTCGTTCGTTCTTTAACTATAGTAGGGGCTAAGATTTACGGATTTATTTGTGTTTTTTCCCTCTCTCTCCCTACTCCTGGTAGTGACATCTCATCAAAGCATTGTTAAATTGTTTGTTGAATTTTTATTTGATTTTTTGTACGAAACGAATTGTTTAACCGTTTAATAACTAACAACATTGC-AAAGGTGTGCAAC-AATAAACTCGCTGCACCGGGAAAAGGGTGACAAACACTGGTTTAGTTAAGTCAGCCTTTCCCCATTCCCTTAAGCCGCCCCTCCCCACTCATAATACTTCCGCGCTGTGTGAAAACTCAACTGAAAGTTGTTTATTGGTCTTCCTTTTACGACCGTTTTTTGTTATGACTAAACACTAAAAACCTGATCTTATCTTGTTATAATAGTACTGTTTAATTATTTTTTTTCGTGCGTTTCGTTTATTATTATTTTTTTTTGGGGCGGGGATAATAGAATCGTTCTTTTGAAGGCGACCGCCCGATAGTGTACAGAATAAGCTTTTGCGAAGTATGAAACCCATAAACATACGTATATAATAATCAAATGTAGCTTATCGAGTTAGCAATTAGGAGAAGAAACTGTACATACGTGACGACAATATAGGTTGTTAAGCTAAGCTATATATATATAATCCGGTTGCTCTGGNTTTGGTACAACGATCTGTTTCGCCGACAAGCCCTTCCCAGCAAGCCGCCCGCCCCCGTATTGGTCGTTTTTCAAGCGATGGCTGCACNAGCTTCTTCTCGCTACTTACACGCTACTACCACAAACGCTTGGGT]

[+] EMBL AGA284800            [CGAGCTGGACATCGGTACGCTCGATCAGCTGGCCGGCTCGCTGGCGGACGAGCTGACGCTGCAGCAGAACGATTACTTCAAAGGATTTACGCAGTCGACGGCGATGCACAATCAGCCACCGCCGCCACCGTACCAGCCGCCCCAGCCCTACTCGCTGATGGCCTCGGTCGCCCCGTCCTACGGTCTCCCGCAGCAACAGAATCAGTGCCCGATTCATCGCATACAACATTGTACCTGCATGCTACAGAATAATGCTCGTGAGAGCATCTCACCGGCATCCGGCACCGGCATGTCGCCCTCATATCCGCACAGCGAACCGTCACCTGACTACGCCATGCTAATTGGATCTCGCGTAATACAAAGAACGCCCCCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM610631             [                                                                                                         ccgCAATCAGCCACCACCGCCACCGTACCAGCCGCCCCAGCCCTACTCGCTGATGGCCTCGGTCGCCCCGTCCTACGGTCTCCCGCAGCAACAGAATCAGTGCCCGATTCATCGCATACAACATTGTACCTGCATGCTACAGAATAATGCTCGTGAGAGCATCTCACCGGCGTCCGGCACTGGCATGTCGCCCTCATATCCGCACAGCGAACCGTCACCTGACTACGCCATGCTAATTGGATCTCGCGTAATACAAAGAACGCCCTCGTCTAGTCCTCCGCTAACGCCAAATACGATCTGCGGATTGATAGCGCCACCGCCGCAGCAGCAGCAGCAGCAGCAAGATCCAACACCGCAGACGCTAATGGGTCAAGTGATGGAAGCTTTAAACAGCCAAACAAACATCGACGACATCAACATCAACGTGGAAGCGTTTCCGTGTGTGGATGAGGTGCTAAAGCACGAGCTCAGCTTGGAGGGATCGCTCGATTTCTCCAACCTGCCACTGTCGATCCACAACAGCTACGCGGCCCCGAACAATTCCAACTCGTCCGACTCGTCGTCCCGGGATCAGTGCGATGACCGCACCGTCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL AGA283507            [                                                                                                                                                                                                      GAATCAGTGCCCGATTCATCGCATACAACATTGTACCTGCATGCTACAGAATAATGCTCGTGAGAGCATCTCACCGGCATCCGGCACCGGCATGTCGCCCTCATATCCGCACAGCGAACCGTCACCTGACTACGCCATGCTAATTGGATCTCGCGTAATACAAAGAACGCCCTCGTCTAGTCCTCCGCTAACGCCAAATACGATCTGCGGATTGATAGCGCCACCGCC      GCAGCAGCAGCAGCAAGATCCAACACCGCAGACGCTAATGGGTCAAGTGATGGAAGCTTTAAACAGCCAAACAAACATCGACGACATCAACATCAACGTGGAAGCGTTTCCGTGTGTGGATGAGGTGCTAAAGCACGAGCTCAGCTTGGAGGGATCGCTCGATTTCTCCAACCTGCCACTGTCGATCCACAACAGCTACGCGGCCCCGAATAATTCCAACTCGTCCGACTCGTCGT CCGGGATCAGTGCGATGACCGCACCGTCCCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS08TO4             [                                                                                                                                                                                                                          GCATACAACATTGTACCTGCATGCTACAGAATAATGCTCGTGAGAGATTCTCACCGGCGTCCGGCACCGGCATGTCGCCCTCATATCCGCACAGCGAACCGTCACCTGACTACGCCATGCTAATTGGATCTCGCGTAATACAAAGAACGCCCTCGTCTAGTCCTCCGCTAACGCCAAATACGATCTGCGGATTGATAGCGCCACCGCC   GCAGCAGCAGCAGCAGCAAGATCCAACACCGCAGACGCTAATGGGTCAAGTGATGGAAGCTTTAAACAGCCAAACAAACATCGACGACATCAACATCAACGTGGAAGCGTTTCCGTGTGTGGATGAGGTGCTAAAGCACGAGCTCAGCTTGGAGGGATCGCTCGATTTCTCCAACCTGCCGCTGTCGATCCACAACAGCTACGCGGCCCCGAACAATTCCAACTCGTCCGACTCGTCGT CCGGGATCAGTGCGATGACCGCACCGTCCCCGAACCAGCAGGCGGCCGCACACAACCACGGCCAGTACGCGGCCCGCACGAGCGTCACGCCACCGTCCTGGGTGCACTAGGGAGTGTGTGATGGAGTGCGAAAAGCATGGAGCCGGTACCGATGGCGCGATGGCGCGCATCGGTCCAGTGAATTGAACGCTTTTCCGAGAGCGGACCCAGTGCCCAAGTGCTGTGAGAATGCAACCCCTTGAAAGAGAAGCCCAGCTTGCCGATTGGGGGAGGAGAAAATAAAAACAAAACACCGACGACCGAAACGACTCACGTGGGGAAGCGCTGAACAACACCATCGCACTGGTGATCGTACGTGATCGTACCGGAAACGGGGAGAACGAATGGAGGAAAAAGGCTCTGCAAAATGAGAAATTAAACAGACAAGCCA AGCTTTTTGTTTTTAATGTACATATAGTGTATGCGAGACCGTAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS08Y5N             [                                                                                                                                                                                                                               CAACATTGTACCTGCATGCTACAGAATAATGCTCGTGAGAG ATCTCACCGGCGTCCGGCACCGGCATGTCGCCCTCATATCCGCACAGCGAACCGTCACCTGACTACGCCATGCTAATTGGATCTCGCGTAATACAAAGAACGCCCTCGTCTAGTCCTCCGCTAACGCCAAATACGATCTGCGGATTGATAGCGCCACCGCC   GCAGCAGCAGCAGCAGCAAGATCCAACACCGCAGACGCTAATGGGTCAAGTGATGGAAGCTTTAAACAGCCAAACAAACATCGACGACATCAACATCAACGTGGAAGCGTTTCCGTGTGTGGATGAGGTGCTAAAACACGAGCTCAGCTTGGAGGGATCGCTCGATTTCTCCAACCTGCCGCTGTCGATCCACAACAGCTACGCGGCCCCGAACAATTCCAACTCGTCCGACTCGTCGT CCGGGATCAGTGCGATGACCGCACCGTCCCCGAACCAGCAGGCGGCCGCACACAACCACGGCCAGTACGCGGCCCGCACGAGCGTCACGCCACCGTCCTGGGTGCACTAGGGAGTGTGTGATGGAGTGCGCGGTGCATGGAGCCGGTACCGATGGCGCGATGGCGCGCATCGGTCCAGTGAATTGAACGCTTTTCCGAGAGCGGACCCAGTGCCCAAGTGCTGTGAGAATGCAACCCCTTGAAAGAGAAGCCCAGCTTGCCGATTGGGGGAGGAGAAAATAAAAACAAAACACCGACGACCGAAACGACTCACGTGGGGAAGCGCTGAACAACACCATCGCACTGGTGATCGTACGTGATCGTACCGGAAACGGGGAGAACGAATGGAGGAAAAAGGCTCTGCAAAATGAGAAATTAAACAGACAAGCCA AGCTTTTTGTTTTTAATGTACATATAGTGTATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CNS08Y5O             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CGCACACAACCACGGCCAGTACGCGGCCCGCACGAGCGTCACGCCACCGTCCTGGGTGCACTAGGGAGTGTGTGATGGAGTGCGCGGTGCATGGAGCCGGTACCGATGGCGCGATGGCGCGCATCGGTCCAGTGAATTGAACGCTTTTCCGAGAGCGGACCCAGTGCCCAAGTGCTGTGAGAATGCAACCCCTTGAAAGAGAAGCCCAGCTTGCCGATTGGGGGAGGAGAAAATAAAAACAAAACACCGACGACCGAAACGACTCACGTGGGGAAGCGCTGAACAACACCATCGCACTGGTGATCGTACGTGATCGTACCGGAAACGGGGAGAACGAATGGAGGAAAAAGGCTCTGCAAAATGAGAAATTAAACAGACAAGCCA AGCTTTTTGTTTTTAATGTACATATAGTGTATGCGAGAGCGTAAGTGTGTGTGAGGGAGAGAGAGCGAGAGAATGAATGGAGTCTCTTGTGTGAATGACAGCGAAGGCTAGTAAACAAGATATAGTGACAGGTAGAGTTGATTAGTAGTAGGAGCGATAGTAGGCGCGATAGTACGAGCGATAGTAGTAGAGTAGCGTTAGTTGCAATAGTTTTTACCTTAGTACCTACACGCAGCTATCCTTATGTCGAGCTCTAAGCTGTGTAGCGTAAGGAGCAGCTTAGTACATTGTTTTAAGATGCGCAACAACAACAAAAGTCACACGCACACACATAGTAAGCGAGAGAAGGAGTTG  TTTTTTTTGTTTCGTTCGTTCTTTAACTATAGTAGGGGCTAAGATTTACGGATTTATTTGTGTTTTTTCCCTCTCTCTCCCTACTCCTGGTAGTGACATCTCATCAAAGCATTGTTAAATTGTTTGTTGAATTTTTATTTGATTTTTTGTACGAAACGAATTGTTTAACCGTTTAATAACTAACAACATTGCGAAAGGTGTGCAACAAATAAACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CNS08TO5             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCAAAAACGTCACGCCACCGTCCTGGGTGCACTAGGGAGTGTGTGATGGAGTGCGCGGTGCATGGAGCCGGTACCGATGGCGCGATGGCGCGCATCGGTCCAGTGAATTGAACGCTTTTCCGAGAGCGGACCCAGTGCCCAAGTGCTGTGAGAATGCAACCCCTTGAAAGAGAAGCCCAGCTTGCCGATTGGGGGAGGAGAAAATAAAAACAAAACACCGACGACCGAAACAACTCACGTGGGGAAGCGCTGAACAACACCATCGCACTGGTGATCGTACGTGATCGTACCGGAAACGGGGAGAACGAATGGAGGAAAAAGGCTCTGCAAAATGAGAAATTAAACAGACAAGCTATAGCTTTTTGTTTTTAATGTACATATAGTGTATGCGAGAGCGTAAGTGTGTGTGAGAGAGAGAGAGCGAGAGAATGAATGGAGTCTCTTGTGTGAATGACAGCGAAGGCTAGTAAACAAGATATAGTGACAGGTAGAGTTGATTAGTAGTAGGAGCGATAGTAGGCGCGATAGTACGAGCGATAGTAGTAGAGTAGTGTTAGTTGCAATAGTTTTTACCTTAGTACCTACACGCAGCTATCCTTATGTCGAGCTCTAAGCTGTGTAGCGTAAGGAGCAGCTTAGTACATTGTTTTAAGATGCGCAACAACAACAAAAGTCACACGCACACACATAGTAAGCGAGAGAAGGAGTTG  TTTTTTTTGTTTCGTTCGTTCTTTAACTATAGTAGGGGCTAAGATTTACGGATTTATTTGTGTTTTTTCCCTCTCTCTCCCTACTCCTGGTAGTGACATCTCATCAAAGCATTGTTAAATTGTTTGTTGAATTTTTATTTGATTTTTTGTACGAAACGAATTGTTTAACCGTTTAATAACTAACAACATTGC AAAGGTGTGCAAC AATAAACTCGCTGCACCGGGgggtg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS08S0J             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCCACCGTCCTGGGTGCACTAGGGAGTGTGTGATGGAGTGCGCGGTGCATGGAGCCGGTACCGATGGCGCGATGGCGCGCATCGGTCCAGTGAATTGAACGCTTTTCCGAGAGCGGACCCAGTGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM628382             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ccGATTAGTAGTAG  GCGATAGTAGGCGCGATAGTATGAGCGACAGTAGTAGAGTAGCGTTAGTTGCAATAGTTTTTACCTTAGTACCTACATGCAGCTATCCTTATGTCGAGCTCTAAGCTGTGTAGCGTAAGGAGCAGCTTAGTACATTGTTTTAAGATGCGCAACAACAACAAAAGTCACACGCACACACATAGTAAGCGAGAGAAGGAGTTGCTTTTTTTTTGTTTCGTTCGTTCTTTAACTATAGTAGGGGCTAAGATTTACGGATTTATTTGTGTTTTTTCCCTCTCTCTCCCTACTCCTGGTAGTGACATCTCATCAAAGCATTGTTAAATTGTTTGTTGAATTTTTATTTGATTTTTTGTACGAAACGAATTGTTTAACCGTTTAATAACTAACAACATTGC AAAGGTGTGCAAC AATAAACTCGCTGCACCGGGAAAAGGGTGACAAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX624506             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGATTTACGGATTTATTTGTGTTTTTTCCCTCTCTCTCCCTACTCCTGGTAGTGACATCTCATCAAAGCATTGTTAAATTGTTTGTTGAATTTTTATTTGATTTTTTGTACGAAACGAATTGTTTAACCGTTTAATAACTAACAACATTGC AAAGGTGTGCAAC AATAAACTCGCTGCACCGGGAAAAGGGTGACAAACACTGGTTTAGTTAAGTCAGCCTTTCCCCATTCCCTTAAGCCGCCCCTCCCCACTCATAATACTTCCGCGCTGTGTGAAAACTCAACTGAAAGTTGTTTATTGGTCTTCCTTTTACGACCGTTTTTTGTTATGACTAAACACTAAAAACCTGATCTTATCTTGTTATAATAGTACTGTTTAATTATTTTTTTTCGTGCGTTTCGTTTATTATTATTTTTTTTTGGGGCGGGGATAATAGAATCGTTCTTTTGAAGGCGACCGCCCGATAGTGTACAGAATAAGCTTTTGCGAAGTATGAAACCCATAAACATACGTATATAATAATCAAATGTAGCTTATCGAGTTAGCAATTAGGAGAAGAAACTGTACATACGTGACGACAATATAGGTTGTTAAGCTAAGCTATATATATATAATCCGGTTGCTCTGGNTTTGGTACAACGATCTGTTTCGCCGACAAGCCCTTCCCAGCAAGCCGCCCGCCCCCGTATTGGTCGTTTTTCAAGCGATGGCTGCACNAGCTTCTTCTCGCTACTTACACGCTACTACCACAAACGCTTGGGT]


>consensus_8522#0 CGAGCTGGACATCGGTACGCTCGATCAGCTGGCCGGCTCGCTGGCGGACGAGCTGACGCT GCAGCAGAACGATTACTTCAAAGGATTTACGCAGTCGACGGCGATGCACAATCAGCCACC GCCGCCACCGTACCAGCCGCCCCAGCCCTACTCGCTGATGGCCTCGGTCGCCCCGTCCTA CGGTCTCCCGCAGCAACAGAATCAGTGCCCGATTCATCGCATACAACATTGTACCTGCAT GCTACAGAATAATGCTCGTGAGAGCATCTCACCGGCGTCCGGCACCGGCATGTCGCCCTC ATATCCGCACAGCGAACCGTCACCTGACTACGCCATGCTAATTGGATCTCGCGTAATACA AAGAACGCCCTCGTCTAGTCCTCCGCTAACGCCAAATACGATCTGCGGATTGATAGCGCC ACCGCCGCAGCAGCAGCAGCAGCAAGATCCAACACCGCAGACGCTAATGGGTCAAGTGAT GGAAGCTTTAAACAGCCAAACAAACATCGACGACATCAACATCAACGTGGAAGCGTTTCC GTGTGTGGATGAGGTGCTAAAGCACGAGCTCAGCTTGGAGGGATCGCTCGATTTCTCCAA CCTGCCACTGTCGATCCACAACAGCTACGCGGCCCCGAACAATTCCAACTCGTCCGACTC GTCGTCCGGGATCAGTGCGATGACCGCACCGTCCCCGAACCAGCAGGCGGCCGCACACAA CCACGGCCAGTACGCGGCCCGCACGAGCGTCACGCCACCGTCCTGGGTGCACTAGGGAGT GTGTGATGGAGTGCGCGGTGCATGGAGCCGGTACCGATGGCGCGATGGCGCGCATCGGTC CAGTGAATTGAACGCTTTTCCGAGAGCGGACCCAGTGCCCAAGTGCTGTGAGAATGCAAC CCCTTGAAAGAGAAGCCCAGCTTGCCGATTGGGGGAGGAGAAAATAAAAACAAAACACCG ACGACCGAAACGACTCACGTGGGGAAGCGCTGAACAACACCATCGCACTGGTGATCGTAC GTGATCGTACCGGAAACGGGGAGAACGAATGGAGGAAAAAGGCTCTGCAAAATGAGAAAT TAAACAGACAAGCCAAGCTTTTTGTTTTTAATGTACATATAGTGTATGCGAGAGCGTAAG TGTGTGTGAGGGAGAGAGAGCGAGAGAATGAATGGAGTCTCTTGTGTGAATGACAGCGAA GGCTAGTAAACAAGATATAGTGACAGGTAGAGTTGATTAGTAGTAGGAGCGATAGTAGGC GCGATAGTACGAGCGATAGTAGTAGAGTAGCGTTAGTTGCAATAGTTTTTACCTTAGTAC CTACACGCAGCTATCCTTATGTCGAGCTCTAAGCTGTGTAGCGTAAGGAGCAGCTTAGTA CATTGTTTTAAGATGCGCAACAACAACAAAAGTCACACGCACACACATAGTAAGCGAGAG AAGGAGTTGTTTTTTTTGTTTCGTTCGTTCTTTAACTATAGTAGGGGCTAAGATTTACGG ATTTATTTGTGTTTTTTCCCTCTCTCTCCCTACTCCTGGTAGTGACATCTCATCAAAGCA TTGTTAAATTGTTTGTTGAATTTTTATTTGATTTTTTGTACGAAACGAATTGTTTAACCG TTTAATAACTAACAACATTGCAAAGGTGTGCAACAATAAACTCGCTGCACCGGGAAAAGG GTGACAAACACTGGTTTAGTTAAGTCAGCCTTTCCCCATTCCCTTAAGCCGCCCCTCCCC ACTCATAATACTTCCGCGCTGTGTGAAAACTCAACTGAAAGTTGTTTATTGGTCTTCCTT TTACGACCGTTTTTTGTTATGACTAAACACTAAAAACCTGATCTTATCTTGTTATAATAG TACTGTTTAATTATTTTTTTTCGTGCGTTTCGTTTATTATTATTTTTTTTTGGGGCGGGG ATAATAGAATCGTTCTTTTGAAGGCGACCGCCCGATAGTGTACAGAATAAGCTTTTGCGA AGTATGAAACCCATAAACATACGTATATAATAATCAAATGTAGCTTATCGAGTTAGCAAT TAGGAGAAGAAACTGTACATACGTGACGACAATATAGGTTGTTAAGCTAAGCTATATATA TATAATCCGGTTGCTCTGGNTTTGGTACAACGATCTGTTTCGCCGACAAGCCCTTCCCAG CAAGCCGCCCGCCCCCGTATTGGTCGTTTTTCAAGCGATGGCTGCACNAGCTTCTTCTCG CTACTTACACGCTACTACCACAAACGCTTGGGT



consensusID : consensus_8522#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1030
fasta sequence
                              [TCCCGCAGGTTAAAACCTGATCTTATCTTGTTCTAATAGTCTGTTTAATAATTTTTTGTGCGTTTCGTTTATTATTATTATTTTTTTTTTTGGGGCGGGGATAATAGAATCGTTCTTTTGAAGTGCGACCGCCCGATAGTGTACAGCAATAAGCTTTTGCGAAGTATGAAACCCATAAACATACGTATATACATTAATCCAACATTGTAAGCTCATCCGCAGTTCAGCANATTCAGCAGCAAGCAAACTTGTNACCATACGTTGCACGGACCAATCATTAGGGTTTGTTAAAGCCTCAAAGGCTNNATTANATTATTCATTATTACCTCCCGGTTGCCTCCTGGGTTATTTGGGTACCAAACCGATTCTTGTTTTTCGGCGAAANAAAGGCCCTTTCCCCCAAGGAAAAANGTCCCGGGTGCACGGAGACACCCCCCGGAGTTAANTTTTGGTGNTACGGCTGCATNTANTCAAAGACCGAATGGTGTCTTGGTCCACACAACGGCCTTTACTTATACATTCCGCACCGATAACTTTTAAAAGTCAACCGCTAAGCTTAACCCAACCAAACANCAGACCCATTGGGGGCATNGCGAACTGGGTGAACACATACATNNCCACACTACTCAGCTGGATGGGGCAACAGAGCCTGAAACCCGGATGGATAATAGGCGACACGGGAACCGGGTCGAAGTCCACACCNACCATAANTGGNNATGNAACANCTTATCAACCAACAANAAGGAAACACACCACNACAAAATCAAAGGANATCAGCAAAAAACCATTATTACCACCATCNAGGGCGACACGGGAAGAAACAACGATTCCNTCCCCAAATATTAAAACCTNGGANAGNCGAACTNTAAAAACCGAAGATGGACGTCACGAGCANACACCCCACGCGTGAGGAACAAGCGGATGGAGCGNACAAAACGACATGGACGAGCGCGGGGNCACGAGGATGACACNACTATGATGCTGAAAACAGNTNTNCACCATGCAGATNGGCAGCAGCGACAGCACAGTA]

[+] EMBL AL695142             [TCCCGCAGGTTAAAACCTGATCTTATCTTGTTCTAATAGTCTGTTTAATAATTTTTTGTGCGTTTCGTTTATTATTATTATTTTTTTTTTTGGGGCGGGGATAATAGAATCGTTCTTTTGAAGTGCGACCGCCCGATAGTGTACAGCAATAAGCTTTTGCGAAGTATGAAACCCATAAACATACGTATATACATTAATCCAACATTGTAAGCTCATCCGCAGTTCAGCANATTCAGCAGCAAGCAAACTTGTNACCATACGTTGCACGGACCAATCATTAGGGTTTGTTAAAGCCTCAAAGGCTNNATTANATTATTCATTATTACCTCCCGGTTGCCTCCTGGGTTATTTGGGTACCAAACCGATTCTTGTTTTTCGGCGAAANAAAGGCCCTTTCCCCCAAGGAAAAANGTCCCGGGTGCACGGAGACACCCCCCGGAGTTAANTTTTGGTGNTACGGCTGCATNTANTCAAAGACCGAATGGTGTCTTGGTCCACACAACGGCCTTTACTTATACATTCCGCACCGATAACTTTTAAAAGTCAACCGCTAAGCTTAACCCAACCAAACANCAGACCCATTGGGGGCATNGCGAACTGGGTGAACACATACATNNCCACACTACTCAGCTGGATGGGGCAACAGAGCCTGAAACCCGGATGGATAATAGGCGACACGGGAACCGGGTCGAAGTCCACACCNACCATAANTGGNNATGNAACANCTTATCAACCAACAANAAGGAAACACACCACNACAAAATCAAAGGANATCAGCAAAAAACCATTATTACCACCATCNAGGGCGACACGGGAAGAAACAACGATTCCNTCCCCAAATATTAAAACCTNGGANAGNCGAACTNTAAAAACCGAAGATGGACGTCACGAGCANACACCCCACGCGTGAGGAACAAGCGGATGGAGCGNACAAAACGACATGGACGAGCGCGGGGNCACGAGGATGACACNACTATGATGCTGAAAACAGNTNTNCACCATGCAGATNGGCAGCAGCGACAGCACAGTA]


>consensus_8522#1 TCCCGCAGGTTAAAACCTGATCTTATCTTGTTCTAATAGTCTGTTTAATAATTTTTTGTG CGTTTCGTTTATTATTATTATTTTTTTTTTTGGGGCGGGGATAATAGAATCGTTCTTTTG AAGTGCGACCGCCCGATAGTGTACAGCAATAAGCTTTTGCGAAGTATGAAACCCATAAAC ATACGTATATACATTAATCCAACATTGTAAGCTCATCCGCAGTTCAGCANATTCAGCAGC AAGCAAACTTGTNACCATACGTTGCACGGACCAATCATTAGGGTTTGTTAAAGCCTCAAA GGCTNNATTANATTATTCATTATTACCTCCCGGTTGCCTCCTGGGTTATTTGGGTACCAA ACCGATTCTTGTTTTTCGGCGAAANAAAGGCCCTTTCCCCCAAGGAAAAANGTCCCGGGT GCACGGAGACACCCCCCGGAGTTAANTTTTGGTGNTACGGCTGCATNTANTCAAAGACCG AATGGTGTCTTGGTCCACACAACGGCCTTTACTTATACATTCCGCACCGATAACTTTTAA AAGTCAACCGCTAAGCTTAACCCAACCAAACANCAGACCCATTGGGGGCATNGCGAACTG GGTGAACACATACATNNCCACACTACTCAGCTGGATGGGGCAACAGAGCCTGAAACCCGG ATGGATAATAGGCGACACGGGAACCGGGTCGAAGTCCACACCNACCATAANTGGNNATGN AACANCTTATCAACCAACAANAAGGAAACACACCACNACAAAATCAAAGGANATCAGCAA AAAACCATTATTACCACCATCNAGGGCGACACGGGAAGAAACAACGATTCCNTCCCCAAA TATTAAAACCTNGGANAGNCGAACTNTAAAAACCGAAGATGGACGTCACGAGCANACACC CCACGCGTGAGGAACAAGCGGATGGAGCGNACAAAACGACATGGACGAGCGCGGGGNCAC GAGGATGACACNACTATGATGCTGAAAACAGNTNTNCACCATGCAGATNGGCAGCAGCGA CAGCACAGTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8522#0      CGAGCTGGACATCGGTACGCTCGATCAGCTGGCCGGCTCGCTGGCGGACGAGCTGACGCT 60
consensus_8522#1      ------------------------------------------------------------
                                                                                  

consensus_8522#0      GCAGCAGAACGATTACTTCAAAGGATTTACGCAGTCGACGGCGATGCACAATCAGCCACC 120
consensus_8522#1      ------------------------------------------------------------
                                                                                  

consensus_8522#0      GCCGCCACCGTACCAGCCGCCCCAGCCCTACTCGCTGATGGCCTCGGTCGCCCCGTCCTA 180
consensus_8522#1      ------------------------------------------------------------
                                                                                  

consensus_8522#0      CGGTCTCCCGCAGCAACAGAATCAGTGCCCGATTCATCGCATACAACATTGTACCTG-CA 239
consensus_8522#1      -----TCCCGCAG-GTTAAAACCTGATCTTATCTTGT----TCTAATAGTCTGTTTAATA 50
                           ********    * ** * *  *     *  *    *  ** * * *   *   *

consensus_8522#0      TGCTACAGAATAATGCTCGTGAGAGCATCTCACCGGCGTCCGGCACCGGCATGTCGCCCT 299
consensus_8522#1      ATTTTTTGTGCGTTTCGTTTATTATTATTATTTTTTTTTTTGGGGCGGGGATAATAGAAT 110
                         *   *     * *   *   *  **          *  **  * ** **       *

consensus_8522#0      CATATCCGCACAGCGAACCGTCACCTGACTACGCCATGCTAATTGGATCTCGCGTAATAC 359
consensus_8522#1      CGTTCTTTTGAAGTG--CGACCGCCCGATAGTGT-ACAGCAATAAGCTTTTGCGAAGTAT 167
                      * *        ** *  *   * ** **    *  *    ***  * * * *** * ** 

consensus_8522#0      AAAGAACGCCCTCGTCTAGTCCTCCGCTAACGCCAAATACGATCTGCGGATTGATAGCGC 419
consensus_8522#1      GAAACCCATAAACATACGTATATACATTAATCC--AACATTGTAAGCTCATCCGCAGTTC 225
                       **   *     * *       * *  ***  *  ** *   *  **  **    **  *

consensus_8522#0      CACCGCCGCAGCAGCA-GCAGCAGCAAGATCCAACACCGCAGACGCTAATGGGTCAAGTG 478
consensus_8522#1      AGCANATTCAGCAGCAAGCAAACTTGTNACCATACGTTGCACGGACCAATCATTAGGGTT 285
                        *     ******** ***        * *  **   ***    * ***   *   ** 

consensus_8522#0      -ATGGAAGCTTTAAACAGCCAAACAAACATCGACGACATCAACATCAACGTGGAAGCGTT 537
consensus_8522#1      TGTTAAAGCCTCAAAGGCTNNATTANATTAT-------TCATTATTACCTCCCGGTTGCC 338
                        *  **** * ***      *  * *           ***  ** * *        *  

consensus_8522#0      TCCGTGTGTGGATGAGGTGCTAAAGCACGAGCTCAGCTTGGAGGGATCGCTCGATTTCTC 597
consensus_8522#1      TCC-TGGGTTATTTGGGTACCAAACCG-ATTCTTGTTTTTCGGCGAAANAAAGGCCCTTT 396
                      *** ** **   *  *** * *** *     **    **   * **      *     * 

consensus_8522#0      CAACCTGCCACTGTCGATCCACAACAGCTACGCGGCCCCGAACAATTCCAACTCGTCCGA 657
consensus_8522#1      CCCCCAAGGAAAAANGTCCCGGGTGCACGGAGACACCCCCCGGAGTT--AANT--TTTGG 452
                      *  **    *     *  **       *   *   ****    * **  ** *  *  * 

consensus_8522#0      CTCGTCGTCCGGGATCAGTGCGATGACCGCACCGTCCCCGAACCAGCAGGCGGCCGCACA 717
consensus_8522#1      TGNTACGGCTGCATNTANT-CAAAGACCGAATGGTGTCTTGGTCCACACAACGGCCTTTA 511
                           ** * *     * * * * ***** *  **  *     *  **    * *    *

consensus_8522#0      CAACCACGGCCAGTACGCGGCCCGCACGAGCGTCACGCCACCGTCCTGGGTGCACTAGGG 777
consensus_8522#1      CTTATACATTCCGCACCGATAACTTTTAAAAGTCAACCGCTAAGCTTAACCCAACCAAAC 571
                      *    **   * * **      *     *  ****  *      * *      ** *   

consensus_8522#0      AGTGTGTG-ATGGAGTGCGCGGTGCATGGAGCCGGTACCGATGGCGCGATGGCGCGCATC 836
consensus_8522#1      ANCAGACCCATTGGGGGCATNGCGAACTGGGTGAACACATACATNNCCACACTACTCAGC 631
                      *        ** * * **   * * *  * *     **  *     * *     * ** *

consensus_8522#0      GGTCCAGTGAATTGAACGCTTTTCCGAGAGCGGACCCAGTGCCCAAGTGCTGTGAGAATG 896
consensus_8522#1      TGGATGGGGCAACAGAGCCT-----GAAACCCGGATGGATAAT-AGGCGACACGGGAACC 685
                       *    * * *    *  **     ** * * *      *    * * *    * ***  

consensus_8522#0      CAACCCCTTGAAAGAGAAGCCCAGCTTGCCGATTGGGGGAGGAGAAAATAAAAACAAAAC 956
consensus_8522#1      GGGTC----GAAGTCCACACCNACCATAANTGGNNATGNAACANCTTATCAACCAACAAN 741
                          *    ***    *  ** * * *          * *  *    ** **   * ** 

consensus_8522#0      ACCGACGACCGAAACGACTCACGTGGGGAAGCGCTGAACAACACCATCGCACTGGTGATC 1016
consensus_8522#1      AAGGAAACACACCACNACAAAATCAAAGGANATCAGCAAAAAACCATTATTACCACCATC 801
                      *  **    *   ** **  *      * *   * * * ** *****          ***

consensus_8522#0      GTACGTGATCGTACCGGAAACGGGGAGAACGAATGGAGGAAAAAGGCTCTGCAAAATGAG 1076
consensus_8522#1      NAGGGCGACACGGGAAGAAACAACGATTCCNTCCCCAAATATTAAAACCTNGGANAGNCG 861
                          * **        *****   **   *      *   *  *    **   * *   *

consensus_8522#0      AAATTAAACAGACAAGCCAAGCTTTTTGTTTTTAATGTACATATAGTGTATGCGAGAGCG 1136
consensus_8522#1      AACTNTAAAAACCG----AAGATGGACGTC----ACGAGCANACACCCCACGCGTGAG-G 912
                      ** *  ** *  *     *** *    **     * *  ** * *    * *** *** *

consensus_8522#0      TAAGTGTGTGTGAGGGAGAGAGAGCGAGA-GAATGAATGGAGTCTCTTGTGTGAATGACA 1195
consensus_8522#1      AACAAGCGGATGGAGCGNACAAAACGACATGGACGAGCGCGGGGNCACGAGGATGACACN 972
                       *   * *  **  *   * * * *** * * * **  *  *   *  * *      ** 

consensus_8522#0      GCGAAGGCTAGTAAACAAGATATAGTGACAGGTAGAGTTGATTAGTAGTAGGAGCGATAG 1255
consensus_8522#1      ACTATGATGCTGAAAACAGNTNTN-CACCATGCAGA--TNGGCAGCAGCGACAGC-ACAG 1028
                       * * *      ***  ** * *     ** * ***  *    ** **    *** * **

consensus_8522#0      TAGGCGCGATAGTACGAGCGATAGTAGTAGAGTAGCGTTAGTTGCAATAGTTTTTACCTT 1315
consensus_8522#1      TA---------------------------------------------------------- 1030
                      **                                                          

consensus_8522#0      AGTACCTACACGCAGCTATCCTTATGTCGAGCTCTAAGCTGTGTAGCGTAAGGAGCAGCT 1375
consensus_8522#1      ------------------------------------------------------------
                                                                                  

consensus_8522#0      TAGTACATTGTTTTAAGATGCGCAACAACAACAAAAGTCACACGCACACACATAGTAAGC 1435
consensus_8522#1      ------------------------------------------------------------
                                                                                  

consensus_8522#0      GAGAGAAGGAGTTGTTTTTTTTGTTTCGTTCGTTCTTTAACTATAGTAGGGGCTAAGATT 1495
consensus_8522#1      ------------------------------------------------------------
                                                                                  

consensus_8522#0      TACGGATTTATTTGTGTTTTTTCCCTCTCTCTCCCTACTCCTGGTAGTGACATCTCATCA 1555
consensus_8522#1      ------------------------------------------------------------
                                                                                  

consensus_8522#0      AAGCATTGTTAAATTGTTTGTTGAATTTTTATTTGATTTTTTGTACGAAACGAATTGTTT 1615
consensus_8522#1      ------------------------------------------------------------
                                                                                  

consensus_8522#0      AACCGTTTAATAACTAACAACATTGCAAAGGTGTGCAACAATAAACTCGCTGCACCGGGA 1675
consensus_8522#1      ------------------------------------------------------------
                                                                                  

consensus_8522#0      AAAGGGTGACAAACACTGGTTTAGTTAAGTCAGCCTTTCCCCATTCCCTTAAGCCGCCCC 1735
consensus_8522#1      ------------------------------------------------------------
                                                                                  

consensus_8522#0      TCCCCACTCATAATACTTCCGCGCTGTGTGAAAACTCAACTGAAAGTTGTTTATTGGTCT 1795
consensus_8522#1      ------------------------------------------------------------
                                                                                  

consensus_8522#0      TCCTTTTACGACCGTTTTTTGTTATGACTAAACACTAAAAACCTGATCTTATCTTGTTAT 1855
consensus_8522#1      ------------------------------------------------------------
                                                                                  

consensus_8522#0      AATAGTACTGTTTAATTATTTTTTTTCGTGCGTTTCGTTTATTATTATTTTTTTTTGGGG 1915
consensus_8522#1      ------------------------------------------------------------
                                                                                  

consensus_8522#0      CGGGGATAATAGAATCGTTCTTTTGAAGGCGACCGCCCGATAGTGTACAGAATAAGCTTT 1975
consensus_8522#1      ------------------------------------------------------------
                                                                                  

consensus_8522#0      TGCGAAGTATGAAACCCATAAACATACGTATATAATAATCAAATGTAGCTTATCGAGTTA 2035
consensus_8522#1      ------------------------------------------------------------
                                                                                  

consensus_8522#0      GCAATTAGGAGAAGAAACTGTACATACGTGACGACAATATAGGTTGTTAAGCTAAGCTAT 2095
consensus_8522#1      ------------------------------------------------------------
                                                                                  

consensus_8522#0      ATATATATAATCCGGTTGCTCTGGNTTTGGTACAACGATCTGTTTCGCCGACAAGCCCTT 2155
consensus_8522#1      ------------------------------------------------------------
                                                                                  

consensus_8522#0      CCCAGCAAGCCGCCCGCCCCCGTATTGGTCGTTTTTCAAGCGATGGCTGCACNAGCTTCT 2215
consensus_8522#1      ------------------------------------------------------------
                                                                                  

consensus_8522#0      TCTCGCTACTTACACGCTACTACCACAAACGCTTGGGT 2253
consensus_8522#1      --------------------------------------
                                                            




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)