cluster # 8523

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Anopheles gambiae
cluster # 8523 cluster # 8523 Sequences # 11 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8523#0 length = 1173 sequences # 6
consensus_8523#1 length = 748 sequences # 1
consensus_8523#2 length = 700 sequences # 1

consensus_8523#3 length = 596 sequences # 1
consensus_8523#4 length = 468 sequences # 1
consensus_8523#5 length = 323 sequences # 1

consensusID : consensus_8523#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1173
fasta sequence

                              [AGGCACCAAACACGCCACACGTCGCCACACATCACACTGAGAGCGCGCGCGCTCAGTTTGTGGACTACAGTTTTTAACACGTCTTGCAGTATTTATATGATCACGATTTTGGGTTTTATTTTTTATATATGTTTTTTTTTTGC-TTATTTTTGAATGCTTGCCCTTTTCCTAGCAATCATTACTGTTTTATTTTGTTTTCCTTTTTAACGGACAAAACGCTTAACTCGCTATTATGATTACCGCTGCTGCTGCTACTGCTGTTTTTTTATATCATTATTCAGGTGCAACTGCACCCACC-TACA-TTCACACACACACGCGCTCCTTCTACTGCGCTGCATCTTTCCTTACGAATATAAGTTTTGCTTACGCACTCTTTACACAATGAACAGTTGCGGGTTGGTTGGTTGGATAGGAAAACTTATCT--ACACACACAGAGCACAGCCGAGCGCAGCACTCAAACGCAACCGCGAAGAGCAGCAGCGTAACCACGTGAGCGCAGCCACCGCAAGATATGAAGCGCGGGACAAATGGGGAAAGGCATTTATGCGTCTGGTCTTCCTTTGGTGGAGAGCATTCGCTTTATCTGTCCCTCTAGTCTGCTGGGTACGATTTACTTTTTGGAAGCACTTTTTTTTAAAGCAAAAACTCGCCTCATGTGTATTTATTGAAACAACACTAAACGGAACCGTCGTGTGCTTCAATTCAAACGCATGAGAGCATGAGAGTTAAGCTCGTAGTAGTTAGAGCAAAGGAAGACACAAGTGAAAAATCAACGTACCGAGCATGATGGAAGAAAACAGCGACAGAAAAGAGAACTCAAATTCCACCCCAAGGACAGGACAGACACATCATACACCACCCACCAACCTCTCCCTCGGTGCTTGGTGGCTTGCATTTACATGGGTGGGTTTACACGCTACGCGAGTACTCGCATGCAACGGGCAACGATAATGAGATGTGCACGTGGTGCGTGTGTGTGCGATTTGTTTTGATTCCATTTCTTTTAATAAGGCACTCGCTTGGTGAATCCAAAATTATAATATTACACATGCATGTACATAAAAGAGGTGTATAGTTCGATTTGTGTGTATGTGCTTGCTTGCTATGTATAGTATAGGAAATAATATAATATATGTATAAAAAAAAGAACTCGCTTGCAAAAAAATCACGGAA]

[-] EMBL BX625197             [AGGCACCAAACACGCCACACGTCGCCACACATCACACTGAGAGCGCGCGCGCTCAGTTTGTGGACTACAGTTTTTAACACGTCTTGCAGTATTTATATGATCACGATTTTGGGTTTTATTTTTTATATATGTTTTTTTTTTGC TTATTTTTTAATGCTTGCCCTTTTCCAAGCAATCATTACTGTTTTATTTTGTTTTCCTTTTTAACGGACAAAACGCTTAACTCGCTATTATGATTACCGCTGCTGCTGCTACTGCTGTTTTTTTATATCATTATTCAGGTGCAACTGCACCCACC TACA TTCACACACACACGCGCTCCTTCTACTGCGCTGCATCTTTCCTTACGAATATAAGTTTTGCTTACGCACTCTTTACACAATGAACAGTTGCGGGTTGGTTGGTTGGATAGGAAAACTTATCTACACACACACAGAGCACAGCCGAGCGCAGCACTCAAACGCAACCGCGAAGAGCAGCAGCGTAACCACGTGA  GCAGCCACCGCAAGATATGAAGCGCGGGACAAATGGGGAAAGGCATTTATGCGTCTGGTCTTCCTTTGGTGGAGAGCATTCGCTTTATCTGTCCCTCTAGTCTGCTGGGTACGATTTACTTTTTGGAAGCACTTTTTTTTAAAGCAAAAACTCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL BX618165             [                                  CACTGAGAGCGCGCGCGCTCAGTTTGTGGACTACAGTTTTTAACACGTCTTGCAGTATTTATATGATCACGATTTTGGG TTCATTTTTTCTATATG  TTTTTTTTGCTTTTTTTTTGAATGCTTGCCCTTTTCCTAGCTATCATTACTGTTTTATTTTGTTTTCCTTTTTGACGGACCGTACGCTTCACTCGCTATTATGATTACCGCTGCTGCTGCTACTGCTGTTTTTTTATATCATTATTCAGGTGCGACTGCACCCACC TACA TTCACACACACACGCGCTCCTTCTACTGCGCTGCTTCTTTCCTTACGTATATTAGTTTTGCTTACGCACTCTTTACACCATGTACAGTTGCGGGTTGGTTGGTTGGATAGGAACACTTATCT  ACACACACAGAGCACAGCCGAGCGCAGCACTCAAACGCAACCGCGAAGAGCAGCAGCGTAACCACGTGAGCGCAGCCACCGCAAGATATGAAGCGCGGGACAAATGGGGAAAGGCATTTATGCGTCTGGTCTTCCTTTGGTGGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AGA281902            [                                                                                                                                                      TTGAATGCTTGCCCTTTTCCTAGCAATCATTACTGTTTTATTTTGTTTTCCTTTTTAACGGACAAAACGCTTAACTCGCTATTATGATTACCGCTGCTGCTGCTACTGCTGTTTTTTTATATCATTATTCAGGTGCAACTGCACCCACC TACA TTCACACACACACGCGCTCCTTCTACTGCGCTGCATCTTTCCTTACGAATATAAGTTTTGCTTACGCACTCTTTACACAATGAACAGTTGCGGGTTGGTTGGTTGGATAGGAAAACTTATCT  ACACACACAGAGCACAGCCGAGCGCAGCACTCAAACCCAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX622344             [                                                                                                                                                                GCCCTTTTCCTAGCAATCATTACTGTTTTATTTTGTTTTCCTTTTTAACGGACAAAACGCTTAACTCGCTATTATGATTACCGCTGCTGCTGCTACTGCTGTTTTTTTATATCATTATTCAGGTGCAACTGCACCCACC TACA TTCACACACACACGCGCTCCTTCTACTGCGCTGCATCTTTCCTTACGAATATAAGTTTTGCTTACGCACTCTTTACACAATGAACAGTTGCGGGTTGGTTGGTTGGATAGGAAAACTTATCT  ACACACACAGAGCACAGCCGAGCGCAGCACTCAAACGCAACCGCGAAGAGCAGCAGCGTAACCACGTGAGCGCAGCCACCGCAAGATATGAAGCGCGGGACAAATGGGGAAAGGCATTTATGCGTCTGGTCTTCCTTTGGTGGAGAGCATTCGCTTTATCTGTCCCTCTAGTCTGCTGGGTACGATTTACTTTTTGGAAGCACTTTTTTTTAAAGCAAAAACTCGCCTCATGTGTATTTATTGAAACAACACTAAACGGAACCGTCGTGTGCTTCAATTCAAACGCATGAGAGCATGAGAGTTAAGCTCGTAGTAGTTAGAGCAAAGGAAGACACAAGTGAAAAATCAACGTACCGAGCATGATGGAAGAAAACAGCGACAGAAAAGAGAACTCAAATTCCACCCCAAGGACAGGACAGACACATCATACACCACCCACCAACCTCTCCCTCGGTGCTTGGTGGCTTGCATTTACATGGGTGGGTTTACACGCTACGCGAGTACTCGCATGCAACGGGCAACGATNATGANATGTGCACGTGGTGCGTGTGTGNGCGATTTGGTTTGATTCat                                                                                                                                                                                ]
[-] EMBL BX623235             [                                                                                                                                                                                                                                                                      TTTTTTATATCATTATTCAGGTGCAACTGCACCCACCTTACATTTCACACACACACGCGCTCNTTTTACTGCGCTGCATCTTTCNTTACGAATATAAGTTTTGCTTACGCACTCTTTACACAATGAACAGTTGCGGGTTGGTTGGTTGGATAGGAAAACTTATCT  ACACACACAGAGCACAGCCGAGCGCAGCACTCAAACGCAACCGCGAAGAGCAGCAGCGTAACCACGTGAGCGCAGCCACCGCAAGATATGAAGCGCGGGACAAATGGGGAAAGGCATTTATGCGTCTGGTCTTCCTTTGGTGGAGAGCATTCGCTTTATCTGTCCCTCTAGTCTGCTGGGTACGATTTACTTTTTGGAAGCACTTTTTTTTAAAGCAAAAACTCGCCTCATGTGTATTTATTGAAACAACACTAAACGGAACCGTCGTGTGCTTCAATTCAAACGCATGAGAGCATGAGAGTTAAGCTCGTAGTAGTTAGAGCAAAGGAAGACACAAGTGAAAAATCAACGTACCGAGCATGATGGAAGAAAACAGCGACAGAAAAGAGAACTCAAATTCCACCCCAAGGACAGGACAGACACATCATACACCACCCACCAACCTCTCCCTCGGTGCTTGGTGGCTTGCATTTACATGGGTGGGTTTACACGCTACGCGAGTACTCGCATGCAACGGGCAACGATAATGAGATGTGCACGTGGTGCGTGTGTGTGCGATTTGTTTTGATTCCATTTCTTTTAATAAGGCACTCGCTTGGTGAATCCAAAATTATAATATTACACATGCATGTACATAAAAGAGG                                                                                                         ]
[-] EMBL AGA280206            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTTGGTGGCTTGCATTAACATGGGTGGGTTTACACGCTACGCGAGTACTCGCATGCAACGGGCAACGATAATGAGATGTGCACGTGGTGCGTGTGTGTGCGATTTGTTTTGATTCCATTTCTTTTAATAAGGCACTCGCTTGGTGAATCCAAAATTATAATATTACACATGCATGTACATAAAAGAGGTGTATAGTTCGATTTGTGTGTATGTGCTTGCTTGCTATGTATAGTATAGGAAATAATATAATATATGTATAAAAAAAAGAACTCGCTTGCAAAAAAATCACGGAA]




>consensus_8523#0
AGGCACCAAACACGCCACACGTCGCCACACATCACACTGAGAGCGCGCGCGCTCAGTTTG
TGGACTACAGTTTTTAACACGTCTTGCAGTATTTATATGATCACGATTTTGGGTTTTATT
TTTTATATATGTTTTTTTTTTGCTTATTTTTGAATGCTTGCCCTTTTCCTAGCAATCATT
ACTGTTTTATTTTGTTTTCCTTTTTAACGGACAAAACGCTTAACTCGCTATTATGATTAC
CGCTGCTGCTGCTACTGCTGTTTTTTTATATCATTATTCAGGTGCAACTGCACCCACCTA
CATTCACACACACACGCGCTCCTTCTACTGCGCTGCATCTTTCCTTACGAATATAAGTTT
TGCTTACGCACTCTTTACACAATGAACAGTTGCGGGTTGGTTGGTTGGATAGGAAAACTT
ATCTACACACACAGAGCACAGCCGAGCGCAGCACTCAAACGCAACCGCGAAGAGCAGCAG
CGTAACCACGTGAGCGCAGCCACCGCAAGATATGAAGCGCGGGACAAATGGGGAAAGGCA
TTTATGCGTCTGGTCTTCCTTTGGTGGAGAGCATTCGCTTTATCTGTCCCTCTAGTCTGC
TGGGTACGATTTACTTTTTGGAAGCACTTTTTTTTAAAGCAAAAACTCGCCTCATGTGTA
TTTATTGAAACAACACTAAACGGAACCGTCGTGTGCTTCAATTCAAACGCATGAGAGCAT
GAGAGTTAAGCTCGTAGTAGTTAGAGCAAAGGAAGACACAAGTGAAAAATCAACGTACCG
AGCATGATGGAAGAAAACAGCGACAGAAAAGAGAACTCAAATTCCACCCCAAGGACAGGA
CAGACACATCATACACCACCCACCAACCTCTCCCTCGGTGCTTGGTGGCTTGCATTTACA
TGGGTGGGTTTACACGCTACGCGAGTACTCGCATGCAACGGGCAACGATAATGAGATGTG
CACGTGGTGCGTGTGTGTGCGATTTGTTTTGATTCCATTTCTTTTAATAAGGCACTCGCT
TGGTGAATCCAAAATTATAATATTACACATGCATGTACATAAAAGAGGTGTATAGTTCGA
TTTGTGTGTATGTGCTTGCTTGCTATGTATAGTATAGGAAATAATATAATATATGTATAA
AAAAAAGAACTCGCTTGCAAAAAAATCACGGAA

consensusID : consensus_8523#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 748
fasta sequence

                              [TTTTACTGATGNCAGTTNCGGTTGGTTGGTTGATAGGATACTTATCGTACACACACAGCGGCACAGCCGAGCGCAGCACTCAGTACGGCNACCGCGAAGAGCAGCAGCGTAACCACGTGAGCGCTAGCCNCCGTCATAGTATATGAGAGCGCGGGACCAATATGGGGTATTAGGGCATTTTATGCGTCTGGTCTTCCTTTGGTGGAGAGCANNTCGCGTTATCNGTCCCTCTAGTCTGCTGGGTACGATTTACTTTTNTGGAAGCACTTTGTTTGTAAAGCTTGTGAACNCTCGCCTCATGTGTATGTTATTGNTACTACACTATTACGGGAACCTGTCGTGTGCTTCAATNTCAAACGCATGAGAGCATGAGAGTTAAGCTCGTAGTAGTTAGAGCAAAGGAAGACACAAGTGANTAAAATCAACGTACCGAGCATGATGGAAGAAAACAGCGACAGNAAAGAGAACTCAAATTCCACCCCAAGGACAGGACAGACACATCATACACCACCCTACCAACCTCTCCCTCGGTGCTTGGTGGCTTGCATTTACATGGGTGGGTTTACACGCTACGCGAGTACTCGCATGCAACGGGCAACGATAATGAGATGTGCACGTGGTGCGTGTGTGTGCGATTTGTTTTGATTCCATTTCTTTTAATAAGGCACTCGCTTGGTGAATCCAAAATTATAATATTACACATGCATGTACATAAAAGAGGTGTATAGTTCGATTTAACCTCGGCGAT]

[-] EMBL AL694628             [TTTTACTGATGNCAGTTNCGGTTGGTTGGTTGATAGGATACTTATCGTACACACACAGCGGCACAGCCGAGCGCAGCACTCAGTACGGCNACCGCGAAGAGCAGCAGCGTAACCACGTGAGCGCTAGCCNCCGTCATAGTATATGAGAGCGCGGGACCAATATGGGGTATTAGGGCATTTTATGCGTCTGGTCTTCCTTTGGTGGAGAGCANNTCGCGTTATCNGTCCCTCTAGTCTGCTGGGTACGATTTACTTTTNTGGAAGCACTTTGTTTGTAAAGCTTGTGAACNCTCGCCTCATGTGTATGTTATTGNTACTACACTATTACGGGAACCTGTCGTGTGCTTCAATNTCAAACGCATGAGAGCATGAGAGTTAAGCTCGTAGTAGTTAGAGCAAAGGAAGACACAAGTGANTAAAATCAACGTACCGAGCATGATGGAAGAAAACAGCGACAGNAAAGAGAACTCAAATTCCACCCCAAGGACAGGACAGACACATCATACACCACCCTACCAACCTCTCCCTCGGTGCTTGGTGGCTTGCATTTACATGGGTGGGTTTACACGCTACGCGAGTACTCGCATGCAACGGGCAACGATAATGAGATGTGCACGTGGTGCGTGTGTGTGCGATTTGTTTTGATTCCATTTCTTTTAATAAGGCACTCGCTTGGTGAATCCAAAATTATAATATTACACATGCATGTACATAAAAGAGGTGTATAGTTCGATTTAACCTCGGCGAT]




>consensus_8523#1
TTTTACTGATGNCAGTTNCGGTTGGTTGGTTGATAGGATACTTATCGTACACACACAGCG
GCACAGCCGAGCGCAGCACTCAGTACGGCNACCGCGAAGAGCAGCAGCGTAACCACGTGA
GCGCTAGCCNCCGTCATAGTATATGAGAGCGCGGGACCAATATGGGGTATTAGGGCATTT
TATGCGTCTGGTCTTCCTTTGGTGGAGAGCANNTCGCGTTATCNGTCCCTCTAGTCTGCT
GGGTACGATTTACTTTTNTGGAAGCACTTTGTTTGTAAAGCTTGTGAACNCTCGCCTCAT
GTGTATGTTATTGNTACTACACTATTACGGGAACCTGTCGTGTGCTTCAATNTCAAACGC
ATGAGAGCATGAGAGTTAAGCTCGTAGTAGTTAGAGCAAAGGAAGACACAAGTGANTAAA
ATCAACGTACCGAGCATGATGGAAGAAAACAGCGACAGNAAAGAGAACTCAAATTCCACC
CCAAGGACAGGACAGACACATCATACACCACCCTACCAACCTCTCCCTCGGTGCTTGGTG
GCTTGCATTTACATGGGTGGGTTTACACGCTACGCGAGTACTCGCATGCAACGGGCAACG
ATAATGAGATGTGCACGTGGTGCGTGTGTGTGCGATTTGTTTTGATTCCATTTCTTTTAA
TAAGGCACTCGCTTGGTGAATCCAAAATTATAATATTACACATGCATGTACATAAAAGAG
GTGTATAGTTCGATTTAACCTCGGCGAT

consensusID : consensus_8523#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 700
fasta sequence

                              [CANCAATCGTTCGGCCCACNCACATTCAACCCCTTGAGTAAGNCGTCGCCGCGTCTCTTCCAAGTTTTTCTGGGAACCTTACCAGTTCTGTTAACCACGGTGCTTGACAGGCTGATTCTATTATGGATCACCGAATTTTGGGTTCAATGTTTTGTTCCGTATCAATGGTGTGTCTTCGTGTGCCTNTATGGTTTTGGAATGCTTGGCCCGTGTGTTCCGTAGCAATCGAGTGACTGCTGTTTATCTTTGNTGTTCTCGCTTCTGTGAACCGGGACAAACAGACGCTTAACTCGTCTATTATGATTACCGCTGCTGCTGCTACTGCTGTTTGTCTCTTATATCATTATTCAGGTGCACACTGCACCCACCTACATTCACACACACACGCGCTCCTTCTACCTGCGCTGCATCGTGTCTCCTGTACGAATATAAGTTTTGCTTACGCACTCTTTACACAATGNACAGTTGCGGGTTGGTTGNTTGGATAGGAAAACTTATCTACACACACAGAGCACAGCCGAGCGCACGCACTCAAACGCAACCCGCGAAGAGCAGCAGCGTAACCACGTGAGCGCAGCCACCGCAAGATATGAAGCGCGGGACAAATGGGGAAAGGCATTTATGCGTCTGGTCTTCCTTTGGTGGAGAGCATTCGCTTTATCTGTCCCTCTAGTCTGCTGGTTTAACCTCTGGCGATTCT]

[-] EMBL AL929708             [CANCAATCGTTCGGCCCACNCACATTCAACCCCTTGAGTAAGNCGTCGCCGCGTCTCTTCCAAGTTTTTCTGGGAACCTTACCAGTTCTGTTAACCACGGTGCTTGACAGGCTGATTCTATTATGGATCACCGAATTTTGGGTTCAATGTTTTGTTCCGTATCAATGGTGTGTCTTCGTGTGCCTNTATGGTTTTGGAATGCTTGGCCCGTGTGTTCCGTAGCAATCGAGTGACTGCTGTTTATCTTTGNTGTTCTCGCTTCTGTGAACCGGGACAAACAGACGCTTAACTCGTCTATTATGATTACCGCTGCTGCTGCTACTGCTGTTTGTCTCTTATATCATTATTCAGGTGCACACTGCACCCACCTACATTCACACACACACGCGCTCCTTCTACCTGCGCTGCATCGTGTCTCCTGTACGAATATAAGTTTTGCTTACGCACTCTTTACACAATGNACAGTTGCGGGTTGGTTGNTTGGATAGGAAAACTTATCTACACACACAGAGCACAGCCGAGCGCACGCACTCAAACGCAACCCGCGAAGAGCAGCAGCGTAACCACGTGAGCGCAGCCACCGCAAGATATGAAGCGCGGGACAAATGGGGAAAGGCATTTATGCGTCTGGTCTTCCTTTGGTGGAGAGCATTCGCTTTATCTGTCCCTCTAGTCTGCTGGTTTAACCTCTGGCGATTCT]




>consensus_8523#2
CANCAATCGTTCGGCCCACNCACATTCAACCCCTTGAGTAAGNCGTCGCCGCGTCTCTTC
CAAGTTTTTCTGGGAACCTTACCAGTTCTGTTAACCACGGTGCTTGACAGGCTGATTCTA
TTATGGATCACCGAATTTTGGGTTCAATGTTTTGTTCCGTATCAATGGTGTGTCTTCGTG
TGCCTNTATGGTTTTGGAATGCTTGGCCCGTGTGTTCCGTAGCAATCGAGTGACTGCTGT
TTATCTTTGNTGTTCTCGCTTCTGTGAACCGGGACAAACAGACGCTTAACTCGTCTATTA
TGATTACCGCTGCTGCTGCTACTGCTGTTTGTCTCTTATATCATTATTCAGGTGCACACT
GCACCCACCTACATTCACACACACACGCGCTCCTTCTACCTGCGCTGCATCGTGTCTCCT
GTACGAATATAAGTTTTGCTTACGCACTCTTTACACAATGNACAGTTGCGGGTTGGTTGN
TTGGATAGGAAAACTTATCTACACACACAGAGCACAGCCGAGCGCACGCACTCAAACGCA
ACCCGCGAAGAGCAGCAGCGTAACCACGTGAGCGCAGCCACCGCAAGATATGAAGCGCGG
GACAAATGGGGAAAGGCATTTATGCGTCTGGTCTTCCTTTGGTGGAGAGCATTCGCTTTA
TCTGTCCCTCTAGTCTGCTGGTTTAACCTCTGGCGATTCT

consensusID : consensus_8523#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 596
fasta sequence

                              [ATTTTAATGTTTAAACATTGCCGTTCGTCTTTTTCACGCTGAGCAGGCACCAAACACGCCACACGTCGCCACACATCACACTGAGAGCGCGCGCGCTCAGTTTGTGGACTACAGTTTTTAACACGTCTTGCAGTATTTATATGATCACGATTTTGGGTTTTATTTTTTCTATATGTTTTTTTTTTGCTTATTTTTGAATGCTTGCCCTTTTCCTAGCAATTATTACTGTTTTATTTTGTTTTCCTTTTTAACGGACAAAACGCTTAACTCGCTATTATGATTACCGCTGCTGCTGCTACTGCTGTTTTTTTTTATATCATTATTCAGGTGCAACTGCACCCACCTACATTCACACACACACGCGCGCTCCTTCTACTGCGCTGCATCTTTCCTTACGAATATAAGTTTTGCTTACGCACTCTTTACACAATGAACAGTTGCGGGTTGGTTGGTTGGATAGGAAAACTTATCTACACACACAGAGCACAGCCGAGCGCAGCACTCAAACGCAACCGCGAAGAGCAGCAGCGTAACCACGTGAGCACAGCCACCGCAAGATATGAAGCGCCCGGACGCGTGGGCGGACGCGTGGGCGG]

[-] EMBL BM645711             [ATTTTAATGTTTAAACATTGCCGTTCGTCTTTTTCACGCTGAGCAGGCACCAAACACGCCACACGTCGCCACACATCACACTGAGAGCGCGCGCGCTCAGTTTGTGGACTACAGTTTTTAACACGTCTTGCAGTATTTATATGATCACGATTTTGGGTTTTATTTTTTCTATATGTTTTTTTTTTGCTTATTTTTGAATGCTTGCCCTTTTCCTAGCAATTATTACTGTTTTATTTTGTTTTCCTTTTTAACGGACAAAACGCTTAACTCGCTATTATGATTACCGCTGCTGCTGCTACTGCTGTTTTTTTTTATATCATTATTCAGGTGCAACTGCACCCACCTACATTCACACACACACGCGCGCTCCTTCTACTGCGCTGCATCTTTCCTTACGAATATAAGTTTTGCTTACGCACTCTTTACACAATGAACAGTTGCGGGTTGGTTGGTTGGATAGGAAAACTTATCTACACACACAGAGCACAGCCGAGCGCAGCACTCAAACGCAACCGCGAAGAGCAGCAGCGTAACCACGTGAGCACAGCCACCGCAAGATATGAAGCGCCCGGACGCGTGGGCGGACGCGTGGGCGG]




>consensus_8523#3
ATTTTAATGTTTAAACATTGCCGTTCGTCTTTTTCACGCTGAGCAGGCACCAAACACGCC
ACACGTCGCCACACATCACACTGAGAGCGCGCGCGCTCAGTTTGTGGACTACAGTTTTTA
ACACGTCTTGCAGTATTTATATGATCACGATTTTGGGTTTTATTTTTTCTATATGTTTTT
TTTTTGCTTATTTTTGAATGCTTGCCCTTTTCCTAGCAATTATTACTGTTTTATTTTGTT
TTCCTTTTTAACGGACAAAACGCTTAACTCGCTATTATGATTACCGCTGCTGCTGCTACT
GCTGTTTTTTTTTATATCATTATTCAGGTGCAACTGCACCCACCTACATTCACACACACA
CGCGCGCTCCTTCTACTGCGCTGCATCTTTCCTTACGAATATAAGTTTTGCTTACGCACT
CTTTACACAATGAACAGTTGCGGGTTGGTTGGTTGGATAGGAAAACTTATCTACACACAC
AGAGCACAGCCGAGCGCAGCACTCAAACGCAACCGCGAAGAGCAGCAGCGTAACCACGTG
AGCACAGCCACCGCAAGATATGAAGCGCCCGGACGCGTGGGCGGACGCGTGGGCGG

consensusID : consensus_8523#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 468
fasta sequence

                              [AACATGCCTGTGTGTGTTGTGTTGTCGTGTTTTTGAATGCTTTGCCCTGTTTCCTAGCAATCATTTACTGTTGTTATTTTGTTTTCCTTTTTAACGGACAAAACGCTTAACTCGCTATTATGATTACCGCTGCTGCTGCTACTGCTGTTTTTTTATATCATTATTCAGGTGCAACTGCACCCACCTACATTCACACACACACGCGCTCCTTCTACTGCGCTGCATCTTTCCTTACGAATATAAGTTTTGCTTACGCACTCTTTACACAATGAACAGTTGCGGGTTGGTTGGTTGGATAGGAAAACTTATCTACACACACAGAGCACAGCCGAGCGCAGCACTCAAACGCAACCGCGAAGAGCAGCAGCGTAACCACGTGAGCGCAGCCACCGCAAGATATGAAGCGCGGGACAAATGGGGAAAGGCATTTATGCGTCTGTCTTCCTTTGGTGGTGAACCTCTGGCGAT]

[-] EMBL AL713834             [AACATGCCTGTGTGTGTTGTGTTGTCGTGTTTTTGAATGCTTTGCCCTGTTTCCTAGCAATCATTTACTGTTGTTATTTTGTTTTCCTTTTTAACGGACAAAACGCTTAACTCGCTATTATGATTACCGCTGCTGCTGCTACTGCTGTTTTTTTATATCATTATTCAGGTGCAACTGCACCCACCTACATTCACACACACACGCGCTCCTTCTACTGCGCTGCATCTTTCCTTACGAATATAAGTTTTGCTTACGCACTCTTTACACAATGAACAGTTGCGGGTTGGTTGGTTGGATAGGAAAACTTATCTACACACACAGAGCACAGCCGAGCGCAGCACTCAAACGCAACCGCGAAGAGCAGCAGCGTAACCACGTGAGCGCAGCCACCGCAAGATATGAAGCGCGGGACAAATGGGGAAAGGCATTTATGCGTCTGTCTTCCTTTGGTGGTGAACCTCTGGCGAT]




>consensus_8523#4
AACATGCCTGTGTGTGTTGTGTTGTCGTGTTTTTGAATGCTTTGCCCTGTTTCCTAGCAA
TCATTTACTGTTGTTATTTTGTTTTCCTTTTTAACGGACAAAACGCTTAACTCGCTATTA
TGATTACCGCTGCTGCTGCTACTGCTGTTTTTTTATATCATTATTCAGGTGCAACTGCAC
CCACCTACATTCACACACACACGCGCTCCTTCTACTGCGCTGCATCTTTCCTTACGAATA
TAAGTTTTGCTTACGCACTCTTTACACAATGAACAGTTGCGGGTTGGTTGGTTGGATAGG
AAAACTTATCTACACACACAGAGCACAGCCGAGCGCAGCACTCAAACGCAACCGCGAAGA
GCAGCAGCGTAACCACGTGAGCGCAGCCACCGCAAGATATGAAGCGCGGGACAAATGGGG
AAAGGCATTTATGCGTCTGTCTTCCTTTGGTGGTGAACCTCTGGCGAT

consensusID : consensus_8523#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 323
fasta sequence

                              [AGGCCATGTCGCCGTGTTAGTCNTGTCCCCCTCTAGTCCTCGCCTGGGTACCGATTGTTACCTTTTTGNAAGCCACCTTTTTTTGTTAAACGCACAAAACTCCGCCCTCATGTNGCATTTAGTTGAAACAACACCTAAACGGAACCGTCGTGTGCTTCAATTCAAACGCATGAGAGCATGAGAGTTAAGCTCGTAGTAGTTAGAGCAAAGGAAGACACCAAGTGAAAAATCAACGTACCGAGCATGATGGAAGAAAACAGCGACAGAAAAGAGAACTCAAATTCCACCCCAAGGACAGGCTTNCGTGCCGGANTTCTTGGCCT]

[-] EMBL BX468353             [AGGCCATGTCGCCGTGTTAGTCNTGTCCCCCTCTAGTCCTCGCCTGGGTACCGATTGTTACCTTTTTGNAAGCCACCTTTTTTTGTTAAACGCACAAAACTCCGCCCTCATGTNGCATTTAGTTGAAACAACACCTAAACGGAACCGTCGTGTGCTTCAATTCAAACGCATGAGAGCATGAGAGTTAAGCTCGTAGTAGTTAGAGCAAAGGAAGACACCAAGTGAAAAATCAACGTACCGAGCATGATGGAAGAAAACAGCGACAGAAAAGAGAACTCAAATTCCACCCCAAGGACAGGCTTNCGTGCCGGANTTCTTGGCCT]




>consensus_8523#5
AGGCCATGTCGCCGTGTTAGTCNTGTCCCCCTCTAGTCCTCGCCTGGGTACCGATTGTTA
CCTTTTTGNAAGCCACCTTTTTTTGTTAAACGCACAAAACTCCGCCCTCATGTNGCATTT
AGTTGAAACAACACCTAAACGGAACCGTCGTGTGCTTCAATTCAAACGCATGAGAGCATG
AGAGTTAAGCTCGTAGTAGTTAGAGCAAAGGAAGACACCAAGTGAAAAATCAACGTACCG
AGCATGATGGAAGAAAACAGCGACAGAAAAGAGAACTCAAATTCCACCCCAAGGACAGGC
TTNCGTGCCGGANTTCTTGGCCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8523#2      CANCAATCGTTCGGCCCACNCACATTCAACCCCTTGAGTAAGNCGTCGCCGCGTCTCTTC 60
consensus_8523#4      ------------------------------------------------------------
consensus_8523#3      ATTTTAATGTTTAAACATTGC-CGTTCGTCTTTTTCACGCTGAGCAGGCACCAAACACGC 59
consensus_8523#0      ---------------------------------------------AGGCACCAAACACGC 15
consensus_8523#1      ---------------------------------------TTTTACTGATGNCAGTTNCGG 21
consensus_8523#5      ------------------------------------------------------------
                                                                                  

consensus_8523#2      CAAGTTTTTCTGGGAACCTTACCAGTTCTGTTAAC-CACGGTGCTTGACAGGCTGATTCT 119
consensus_8523#4      ------------------------------------------------------------
consensus_8523#3      CACACGTCGCCACACATCACACTGAGAGCGCGCGCGCTCAGTTTGTGGACTACAGTTTTT 119
consensus_8523#0      CACACGTCGCCACACATCACACTGAGAGCGCGCGCGCTCAGTTTGTGGACTACAGTTTTT 75
consensus_8523#1      TTGGTTGGTTGATAGGATACTTATCGTACACACACAGCGGCACAGCCGAGCGCAGCACTC 81
consensus_8523#5      ------------------------------------------------------------
                                                                                  

consensus_8523#2      ATTATGGATCACCGAATTT-TGGGTTCAATGTTTTGTTCCGTATCAATGGTGTGTCTTCG 178
consensus_8523#4      ------------------------------------------AACATGCCTGTGTGTGT- 17
consensus_8523#3      AACACGTCTTGCAGTATTTATATGATCACGATTTTGGGTTTTATTTTTTCTATATGTTT- 178
consensus_8523#0      AACACGTCTTGCAGTATTTATATGATCACGATTTTGGGTTTTATTTTTTATATATGTTT- 134
consensus_8523#1      AGTACGGCNACCGCGAAGAGCAGCAGCGTAACCACGTGAGCGCTAGCCNCCGTCATAGTA 141
consensus_8523#5      ------------------------------------------------------------
                                                                                  

consensus_8523#2      TGTGCCTNTATGGTTTTGGAATGCTTGGCCCGTGTGTTCCGTAGCAATCGAGTGACTGCT 238
consensus_8523#4      TGTGTTGTCGTGTTTTTG-AATGCTTTGCCC---TGTTTCCTAGCAATC-ATTTACTGTT 72
consensus_8523#3      TTTTTTTGCTTATTTTTG-AATGCTTGCCCT-----TTTCCTAGCAATT--ATTACTGTT 230
consensus_8523#0      TTTTTTTGCTTATTTTTG-AATGCTTGCCCT-----TTTCCTAGCAATC--ATTACTGTT 186
consensus_8523#1      TATGAGAGCGCGGGACCAATATGGGGTATTAGGGCATTTTATGCGTCTGGTCTTCCTTTG 201
consensus_8523#5      -----------------------------------------------AGGCCATGTCGCC 13
                                                                                  

consensus_8523#2      GTTTATCTTTGNTGTTCTCGCTTCTGTGAACCGGGACAAACAGACGCTTAACTCGTCTAT 298
consensus_8523#4      GTTATT-----TTGTTTTCCTTTTT---AAC--GGACAAA---ACGCTTAACTCG-CTAT 118
consensus_8523#3      -TTATT-----TTGTTTTCCTTTTT---AAC--GGACAAA---ACGCTTAACTCG-CTAT 275
consensus_8523#0      -TTATT-----TTGTTTTCCTTTTT---AAC--GGACAAA---ACGCTTAACTCG-CTAT 231
consensus_8523#1      GTGGAG----AGCANNTCGCGTTAT-------------CNGTCCCTCTAGTCTGC-TGGG 243
consensus_8523#5      GTGTTA----GTCNTGTCCCCCTCT-------------AGTCCTCGCCTGGGTAC-CGAT 55
                       *                    * *                   * *     *       

consensus_8523#2      TATGA-TTACCGCTGCTGCTGCTACTGCTGTTTGTCTCTTATATCATTATTCAGGTGCAC 357
consensus_8523#4      TATGA-TTACCGCTGCTGCTGCTACTGCTGTTT---TTTTATATCATTATTCAGGTGCA- 173
consensus_8523#3      TATGA-TTACCGCTGCTGCTGCTACTGCTGTTT-TTTTTTATATCATTATTCAGGTGCA- 332
consensus_8523#0      TATGA-TTACCGCTGCTGCTGCTACTGCTGTTT---TTTTATATCATTATTCAGGTGCA- 286
consensus_8523#1      TACGATTTACTTTTNTGGAAGCA--CTTTGTTTGTAAAGCTTGTGAACNCTCGCC-TCAT 300
consensus_8523#5      TG----TTACCTTTTTGNAAGCCACCTTTTTTTGTTAAACGCACAAAACTCCGCCCTCAT 111
                      *     ****   *      **      * ***            *     *     ** 

consensus_8523#2      ACTGCACCCACCTACATTCACACACACACGCGC--TCCTTCTACCTGCGCTGCATCGTGT 415
consensus_8523#4      ACTGCACCCACCTACATTCACACACACACGCGC--TCCTTCTAC-TGCGCTGCATC---T 227
consensus_8523#3      ACTGCACCCACCTACATTCACACACACACGCGCGCTCCTTCTAC-TGCGCTGCATC---T 388
consensus_8523#0      ACTGCACCCACCTACATTCACACACACACGCGC--TCCTTCTAC-TGCGCTGCATC---T 340
consensus_8523#1      GTG-TATGTTATTGNTACTACACTATTACGGGA----ACCTGTCGTGTGCTTCAATNTCA 355
consensus_8523#5      GTNGCATTTAGTTGAAACAACACCTAAACGGAA------CCGTCGTGTGCTTCAATT-CA 164
                           *      *      ****    ***             * ** *** **      

consensus_8523#2      CTCCTGTACGAATATAAGTTTTGCTTACGCACTCTTTACACAATGNACAGTTGCGGGTTG 475
consensus_8523#4      TTCCT-TACGAATATAAGTTTTGCTTACGCACTCTTTACACAATGAACAGTTGCGGGTTG 286
consensus_8523#3      TTCCT-TACGAATATAAGTTTTGCTTACGCACTCTTTACACAATGAACAGTTGCGGGTTG 447
consensus_8523#0      TTCCT-TACGAATATAAGTTTTGCTTACGCACTCTTTACACAATGAACAGTTGCGGGTTG 399
consensus_8523#1      AACGCATGAGAGCATGAGAGTTAAGCTCGTAGTAGTTAGAGCAAAGGAAGACAC-AAGTG 414
consensus_8523#5      AACGCATGAGAGCATGAGAGTTAAGCTCGTAGTAGTTAGAGCAAAGGAAGACACCAAGTG 224
                        *   *  **  ** **  **     ** * *  *** *  *     **   *    **

consensus_8523#2      GTTGNTTGGATAGGAAAACTTATCTACACACACAGAGCACAGCCGAGCGCACGCACTCAA 535
consensus_8523#4      GTTGGTTGGATAGGAAAACTTATCTACACACACAGAGCACAGCCGAGCGCA-GCACTCAA 345
consensus_8523#3      GTTGGTTGGATAGGAAAACTTATCTACACACACAGAGCACAGCCGAGCGCA-GCACTCAA 506
consensus_8523#0      GTTGGTTGGATAGGAAAACTTATCTACACACACAGAGCACAGCCGAGCGCA-GCACTCAA 458
consensus_8523#1      ANTAA--AATCAACGTACCGAGCATGATGGAAGAAAACAGCGACAGNAAAGAGAACTCAA 472
consensus_8523#5      A--AA--AATCAACGTACCGAGCATGATGGAAGAAAACAGCGACAGAAAAGAGAACTCAA 280
                                 *    * *     *      * * * **  * *        * ******

consensus_8523#2      ACGCAACCCGCGAAGAGCAGCAG---CGTAACCACGTGAGCGCAGCCACCGCAAGATATG 592
consensus_8523#4      ACGCAACC-GCGAAGAGCAGCAG---CGTAACCACGTGAGCGCAGCCACCGCAAGATATG 401
consensus_8523#3      ACGCAACC-GCGAAGAGCAGCAG---CGTAACCACGTGAGCACAGCCACCGCAAGATATG 562
consensus_8523#0      ACGCAACC-GCGAAGAGCAGCAG---CGTAACCACGTGAGCGCAGCCACCGCAAGATATG 514
consensus_8523#1      ATTCCACC--CCAAGGACAGGACAGACACATCATACACCACCCTACCAACCTCTCCCTCG 530
consensus_8523#5      ATTCCACC--CCAAGGACAGGCT---TNCGTGCCGGANTTCTTGGCCT------------ 323
                      *  * ***  * ***  ***                    *    **             

consensus_8523#2      AAGCGCG-GGACAAATGGGGAAAGGCATTTATGCGTCTGGTCTTCCTTTGGTGGAGAGCA 651
consensus_8523#4      AAGCGCG-GGACAAATGGGGAAAGGCATTTATGCGTCTG-TCTTCCTTTGGTGGTGAACC 459
consensus_8523#3      AAGCGCCCGGACGCGTGGGCGGACGCGTGGGCGG-------------------------- 596
consensus_8523#0      AAGCGCG-GGACAAATGGGGAAAGGCATTTATGCGTCTGGTCTTCCTTTGGTGGAGAGCA 573
consensus_8523#1      GTGCTTGGTGGCTTGCATTTACATGGGTGGGTTTACACGCTACGCGAGTACTCGCATGCA 590
consensus_8523#5      ------------------------------------------------------------
                                                                                  

consensus_8523#2      TTCGCTTTATCTGTCCCTCTAGTCTGCTGGTTTAACCTCTGGCGATTCT----------- 700
consensus_8523#4      TCTGGCG-AT-------------------------------------------------- 468
consensus_8523#3      ------------------------------------------------------------
consensus_8523#0      TTCGCTTTATCTGTCCCTCTAGTCTGCTGGGTACGATTTACTTTTTGGAAGCACTTTTTT 633
consensus_8523#1      ACGGGCAACGATAATGAGATGTGCACGTGGTGCGTGTGTGTGCGATTTGTTTTGATTCCA 650
consensus_8523#5      ------------------------------------------------------------
                                                                                  

consensus_8523#2      ------------------------------------------------------------
consensus_8523#4      ------------------------------------------------------------
consensus_8523#3      ------------------------------------------------------------
consensus_8523#0      TTAAAGCAAAAACTCGCCTCATGTGTATTTATTGAAACAACACTAAACGGAACCGTCGTG 693
consensus_8523#1      TTTCTTTTAATAAGGCACTCGCTTGGTGAATCCAAAATTATAATATTACACATGCATGTA 710
consensus_8523#5      ------------------------------------------------------------
                                                                                  

consensus_8523#2      ------------------------------------------------------------
consensus_8523#4      ------------------------------------------------------------
consensus_8523#3      ------------------------------------------------------------
consensus_8523#0      TGCTTCAATTCAAACGCATGAGAGCATGAGAGTTAAGCTCGTAGTAGTTAGAGCAAAGGA 753
consensus_8523#1      CATAAAAGAGGTGTATAGTTCGATTTAACCTCGGCGAT---------------------- 748
consensus_8523#5      ------------------------------------------------------------
                                                                                  

consensus_8523#2      ------------------------------------------------------------
consensus_8523#4      ------------------------------------------------------------
consensus_8523#3      ------------------------------------------------------------
consensus_8523#0      AGACACAAGTGAAAAATCAACGTACCGAGCATGATGGAAGAAAACAGCGACAGAAAAGAG 813
consensus_8523#1      ------------------------------------------------------------
consensus_8523#5      ------------------------------------------------------------
                                                                                  

consensus_8523#2      ------------------------------------------------------------
consensus_8523#4      ------------------------------------------------------------
consensus_8523#3      ------------------------------------------------------------
consensus_8523#0      AACTCAAATTCCACCCCAAGGACAGGACAGACACATCATACACCACCCACCAACCTCTCC 873
consensus_8523#1      ------------------------------------------------------------
consensus_8523#5      ------------------------------------------------------------
                                                                                  

consensus_8523#2      ------------------------------------------------------------
consensus_8523#4      ------------------------------------------------------------
consensus_8523#3      ------------------------------------------------------------
consensus_8523#0      CTCGGTGCTTGGTGGCTTGCATTTACATGGGTGGGTTTACACGCTACGCGAGTACTCGCA 933
consensus_8523#1      ------------------------------------------------------------
consensus_8523#5      ------------------------------------------------------------
                                                                                  

consensus_8523#2      ------------------------------------------------------------
consensus_8523#4      ------------------------------------------------------------
consensus_8523#3      ------------------------------------------------------------
consensus_8523#0      TGCAACGGGCAACGATAATGAGATGTGCACGTGGTGCGTGTGTGTGCGATTTGTTTTGAT 993
consensus_8523#1      ------------------------------------------------------------
consensus_8523#5      ------------------------------------------------------------
                                                                                  

consensus_8523#2      ------------------------------------------------------------
consensus_8523#4      ------------------------------------------------------------
consensus_8523#3      ------------------------------------------------------------
consensus_8523#0      TCCATTTCTTTTAATAAGGCACTCGCTTGGTGAATCCAAAATTATAATATTACACATGCA 1053
consensus_8523#1      ------------------------------------------------------------
consensus_8523#5      ------------------------------------------------------------
                                                                                  

consensus_8523#2      ------------------------------------------------------------
consensus_8523#4      ------------------------------------------------------------
consensus_8523#3      ------------------------------------------------------------
consensus_8523#0      TGTACATAAAAGAGGTGTATAGTTCGATTTGTGTGTATGTGCTTGCTTGCTATGTATAGT 1113
consensus_8523#1      ------------------------------------------------------------
consensus_8523#5      ------------------------------------------------------------
                                                                                  

consensus_8523#2      ------------------------------------------------------------
consensus_8523#4      ------------------------------------------------------------
consensus_8523#3      ------------------------------------------------------------
consensus_8523#0      ATAGGAAATAATATAATATATGTATAAAAAAAAGAACTCGCTTGCAAAAAAATCACGGAA 1173
consensus_8523#1      ------------------------------------------------------------
consensus_8523#5      ------------------------------------------------------------