cluster # 8555

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Anopheles gambiae
cluster # 8555 cluster # 8555 Sequences # 11 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8555#0 length = 910 sequences # 3
consensus_8555#1 length = 882 sequences # 6

consensus_8555#2 length = 666 sequences # 1
consensus_8555#3 length = 493 sequences # 1

consensusID : consensus_8555#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 910
fasta sequence

                              [CCCCAGCTCGGGCACTTGTGGCCTTTTTTTTTTTTTTTTTTTTTAAGATCGAGCAATGACAAGGGATTTATTTTCTGACACGCTTTTAGTACGGCTTGAATCGCTTTGCTTTCTTGATCTGTTCCATCTTCTTCAAATCCCGGTCGTACTTTTTCCGCAAGCTGATAATGTCGTTCTTCTTCGATTCGCGTATCTGGAAGGTGTAGAAATTTTTCAGCTCCTTTTCCGACTGGCCCTCGTACAGCTTCTTCTCCAGCCTCTTCACGACGCCCTGCGTTTGGGCAAAGACGCCAGAACTCTTCTTCGACACCGTCACCCAACCGTCCTCATCGACCGCATTGTTGCTCTCTGCGGCCTTCTGCTCCTCAATCTTGCGATCGTACGATTCCATGTACTGGTCGATTTCCTGCTGCAGTGCGGCCGGGTTCGGGATGCGCCCGTGGTACGCCCTGGTCCACTTTTCCACCCCTGTGAGCAGTGGCCTCTCTTCCGTGTGCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAGCGCACCAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCATCCGCTCGATCGGGGCGGACTCTTTGCTGGAAGGCTTTTCCTGCAGCACCACGCGCTCGATTTCACCCGCCGAGGAGAATGCATGCTGCAGCGCTTGCTCTGTTGCGTACGGTGGCACATTCAGGACGTACAGCGTACGCCCGGGCGGTTTCTGTTTGCAGGTTGCTTTGGAGGCATTTTCCTTCGCGAACAGCTGATGGCAGTGGGTGTCCGACTCCTTGTACTTTAGATCGATCGCGGTAAACTCGTCGGCAGACGACAATGGTGTTGCAGGGCAGTTTAGAATTCCAGTTGGCCAACAGTTCTCGAGGAATTC]

[-] EMBL CNS0995C             [CCCCAGCTCGGGCACTTGTGGCCTTTTTTTTTTTTTTTTTTTTTAAGATCGAGCAATGACAAGGGATTTATTTTCTGACACGCTTTTAGTACGGCTTGAATCGCTTTGCTTTCTTGATCTGTTCCATCTTCTTCAAATCCCGGTCGTACTTTTTCCGCAAGCTGATAATGTCGTTCTTCTTCGATTCGCGTATCTGGAAGGTGTAGAAATTTTTCAGCTCCTTTTCCGACTGGCCCTCGTACAGCTTCTTCTCCAGCCTCTTCACGACGCCCTGCGTTTGGGCAAAGACGCCAGAACTCTTCTTCGACACCGTCACCCAACCGTCCTCATCGACCGCATTGTTGCTCTCTGCGGCCTTCTGCTCCTCAATCTTGCGATCGTACGATTCCATGTACTGGTCGATTTCCTGCTGCAGTGCGGCCGGGTTCGGGATGCGCCCGTGGTACGCCCTGGTCCACTTTTCCACCCCTGTGAGCAGTGGCCTCTCTTCCGTGTGCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAGCGCACCAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCATCCGCTCGATCGGGGCGGACTCTTTGCTGGAAGGCTTTTCCTGCAGCACCACGCGCTCGATTTCACCCGCCGAGGAGAATGCATGCTGCAGCGCTTGCTCTGTTGCGTACGGTGGCACATTCAGGACGTACAGCGTACGCCCGGGCGGTTTCTGTTTGCAGGTTGCTTTGGAGGCATTTTCCTTCGCGAACAGCTGATGGCAGTGGGTGTCCGACTCCTTGTACTTTAGATCGATCGCGGTAAACTCGTCGGCAGACG                                                          ]
[+] EMBL CNS0995D             [                                 TTTTTTTTTTTAA ATCGGACAATGACAAGGGATTTATTTTCTGACACGCTTTTAGTACGGCTTGAATCGCTTTGCTTTCTTGATCTGTTCCATCTTCTTCAAATCCCGGTCGTACTTTTTCCGCAAGCTGATAATGTCGTTCTTCTTCGATTCGCGTATCTGGAAGGTGTAGAAATTTTTCAGCTCCTTTTCCGACTGGCCCTCGTACAGCTTCTTCTCCAGCCTCTTCACGACGCCCTGCGTTTGGGCAAAGACGCCAGAACTCTTCTTCGACACCGTCACCCAACCGTCCTCATCGACCGCATTGTTGCTCTCTGCGGCCTTCTGCTCCTCAATCTTGCGATCGTACGATTCCATGTACTGGTCGATTTCCTGCTGCAGTCCGGCCGGGTTCGGGATGCGCCCGTGGTACGCCCTGGTCCACTTTTCCACCCCTGTTAGCAGTGGCCTCTCTTCCGTGTTCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAGCGCACCAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCATCCGCTCGATCGGGGCGGACTCTTTGCTGGAAGGCTTTTCCTGCAGCACCACGCGCTCGATTTCACCCGCCGAGGAGAATGCATGCTGCAGCGCTTGCTCTGTTGCGTACGGTGGCACATTCAGGACGTACAGCGTACGCCCGGGCGGTTTCTGTTTGCAGGTTGCTTTGGAGGCATTTTCCTTCGCGAACAGCTGAAGGCAGTTGGTGTCCGACTCCTTGTACTTTAGATCGATCGCGGTAAACTCGTCGGCAGA GACAATGGTGTTGCAGGGCAGTTTAGAATTCCAGTTGGCCAACAGTTCTCGAGGAATTC]
[+] EMBL CNS09RYF             [                                                              tGGATTTATTTTCTGACACGCTTTCAGTACGGCTTGAATCGCTTTGCTTTCTTGATCTGTTCCATCTTCTTCAAATCCCGGTCGTACTTTTTCCGCAAGCTGATAATGTCGTTCTTCTTGGATTCGCGTATCTGGAAGGTGTAGAAATTTTTCAGCTCCTTTTCCGACTGGCCCTCGTACAGCTTCTTCTCTAGCCTCTTCACGACGCCCTGCGTTTGGGCAAAGACGCCAGAACTTTTCTTCGACACCGTCACCCAACCGTCCTCATCGACCGCATTGTTGCTCTCTGCGGCCTTCTGCTCCTCAATCTTGCGATCGTACGATTCCATGTACTGGTCGATTTCCTGCTGCAGTGCGGCCGGGTTCGGGATGCGCTCGTGGTACGCCTTGGTCCACTTGTCCACCCCGGTGAGCAGTGGCCTCTCTTCCGTGTGCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAGCGCACCAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCATCCGTTC                                                                                                                                                                                                                                                                                                                     ]




>consensus_8555#0
CCCCAGCTCGGGCACTTGTGGCCTTTTTTTTTTTTTTTTTTTTTAAGATCGAGCAATGAC
AAGGGATTTATTTTCTGACACGCTTTTAGTACGGCTTGAATCGCTTTGCTTTCTTGATCT
GTTCCATCTTCTTCAAATCCCGGTCGTACTTTTTCCGCAAGCTGATAATGTCGTTCTTCT
TCGATTCGCGTATCTGGAAGGTGTAGAAATTTTTCAGCTCCTTTTCCGACTGGCCCTCGT
ACAGCTTCTTCTCCAGCCTCTTCACGACGCCCTGCGTTTGGGCAAAGACGCCAGAACTCT
TCTTCGACACCGTCACCCAACCGTCCTCATCGACCGCATTGTTGCTCTCTGCGGCCTTCT
GCTCCTCAATCTTGCGATCGTACGATTCCATGTACTGGTCGATTTCCTGCTGCAGTGCGG
CCGGGTTCGGGATGCGCCCGTGGTACGCCCTGGTCCACTTTTCCACCCCTGTGAGCAGTG
GCCTCTCTTCCGTGTGCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAGCGCAC
CAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCATCCGCT
CGATCGGGGCGGACTCTTTGCTGGAAGGCTTTTCCTGCAGCACCACGCGCTCGATTTCAC
CCGCCGAGGAGAATGCATGCTGCAGCGCTTGCTCTGTTGCGTACGGTGGCACATTCAGGA
CGTACAGCGTACGCCCGGGCGGTTTCTGTTTGCAGGTTGCTTTGGAGGCATTTTCCTTCG
CGAACAGCTGATGGCAGTGGGTGTCCGACTCCTTGTACTTTAGATCGATCGCGGTAAACT
CGTCGGCAGACGACAATGGTGTTGCAGGGCAGTTTAGAATTCCAGTTGGCCAACAGTTCT
CGAGGAATTC

consensusID : consensus_8555#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 882
fasta sequence

                              [CGCACATGCTGTCNTGTTGTTGGAATTTTTTAAGATCGAGCAATGACAAGGGATTTATTTTCTGACACGCTTTTAGTACGGCTTGAATCGCTTTGCTTTCTTGATCTGTTCCATCTTCTTCAAATCCCGGTCGTACTTTTTCCGCAGGCTGATAATGTCGTTCTTCTTCGATTCGCGTATCTGGAAGGTGTAGAAATTTTTCAGCTCCTTTTCCGACTGGCCCTCGTACAGCTTCTTCTCCAGCCTCTTTACGACGCCCTGCGTTTGGGCAAAGACGCTGGAACTCTTCTTTGACACCGTC-ACCCAACCGTCCTCATCGACCGCATTGTTGCTCTCT-GCGGCCTTCTGCTCCTCAATCTTGCGATCGTACGATT-CCATGTACT-GGTCGATTTCCTGCTGCAGTGCGGCCGGGTTCGGGATGCGCTCGTGGTACGCCTTGGTCCACTTGTCCACCCCGGTGAGCAGTGGCCTCTCTTCCGTGTGCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAGCGCACCAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCATCCGCTCGATCGGGGCGGACTCTTTGCTGGAAGGCTTTTCCTGCAGCACCACGCGCTCGATTTCACCCGCCGAGGAGAATGCATGCTGCAGCGCTTGCTCTGTTGCGTACGGTGGCACATTTAGGACGTACAGCGTACGTCCGGGCGGTTTCTGTTTGCAGGTTGCTTTGGAGGCATTTTCCTTCGCGAACAGCTGATGGCAGTGGGTGTCCGACTCCTTGTACTTTAGATCGATCGCGGTAAATTCATCGGCCGACGACATGGTGTTGCTGGGGAGTTTAGAATTATCGAAACCAGTAGG]

[+] EMBL BX466827             [CGCACATGCTGTCNTGTTGTTGGAATTTTTTAAGATCGAGCAATGACAAGGGATTTATTTTCTGACACGCTTTTAGTACGGCTTGAATCGCTTTGCTTTCTTGATCTGTTCCATCTTCTTCAAATCCCGGTCGTACTTTTTCCGCAGGCTGATAATGTCGTTCTTCTTCGATTCGCGTATCTGGAAGGTGTAGAAATTTTTCAGCTCCTTTTCCGACTGGCCCTCGTACAGCTTCTTCTCCAGCCTCTTTACGACGCCCTGCGTTTGGGCAAAGACGCTGGAACTCTTCTTTGACACCGTCGACCCAACCGTCCTCATCGACCGCATTGTTGCTCTCTGGCGGCCTTCTGCTCCTCAATCTTGCGATCGTACGATTNCCATGTACTGGGTCGATTTCCTGNTGCAGNGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL BX625119             [                               AAGATCGAGCAATGACAAGGGATTTATTTTCTGACACGCTTTTAGTACGGCTTGAATCGCTTTGCTTTCTTGATCTGTTCCATCTTCTTCAAATCCCGGTCGTACTTTTTCCGCAGGCTGATAATGTCGTTCTTCTTCGATTCGCGTATCTGGAAGGTGTAGAAATTTTTCAGCTCCTTTTCCGACTGGCCCTCGTACAGCTTCTTCTCCAGCCTCTTTACGACGCCCTGCGTTTGGGCAAAGACGCTGGAACTCTTCTTTGACACCGTC ACCCAACCGTCCTCATCGACCGCATTGTTGCTCTCT GCGGCCTTCTGCTCCTCAATCTTGCGATCGTACGATT CCATGTACT GGTCGATTTCCTGCTGCAGTGCGGCCGGGTTCGGGATGCGCTCGTGGTACGCCTTGGTCCACTTGTCCACCCCGGTGAGCAGTGGCCTCTCTTCCGTGTGCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAGCGCACCAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCATCCGCTCGATCGGGGCGGACTCTTTGCTGGAAGGCTTTTCCTGCAGCACCACGCGCTCGATTTCACCCGCCGAGGAGAATGCATGCTGCAGCGCTTGCTCTGTTGCGTACGGTGGCACATTTAGGACGTACAGCGTACGTCCGGGCGGTTTCTGTTTGCAGGTTGCTTTGGAGGCATTTTCCTTCGCGAACAGCTGATGGCAGTGGGTGTCCGACTCCTTGTACTTTAGATCGATCGCGGTAAATTCATCGGCCGACGA                                          ]
[-] EMBL BX621844             [                                                                        TTAGTACGGCTTGAATCGCTTTGCTTTCTTGATCTGTTCCATCTT TTCAAATCCCGGTCGTACTTTTTCCGCAAGCTGATAATGTCGTTCTTCTTCGATTCGCGTATCTGGAAGGTGTAGAAATTTTTCAGCTCCTTTTCCGACTGGCCCTCGTACAGCTTCTTCTCCAGCCTCTTCACGACGCCCTGCGTTTGGGCAAAGACGCCGGAACTCTTCTTNGACACCGTC ACCCAACCGTCCTCATCGACCGCATTGTTGCTCTCT GCGGCCTTCTGCTCCTCAATCTTGCGATCGTACGATT CCATGTACT GGTCGATTTCCTGCTGCAGTGCGGCCGGGTTCGGGATGCGCTCGTGGTACGCCTTGGTCCACTTGTCCACCCCGGTGAGCAGTGGCCTCTCTTCCGTGTGCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAGCGCACCAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCATCCGCTCGATCGGGGCGGACTCTTTGCTGGAAGGCTTTTCCTGCAGCACCACGCGCTCGATTTCACCCG CGAGGAGAATGCATGCTGCAGCGCTTGCTCTGTTGCGTACGGTGGCACATTCAGGACGTACAGCGTACGTCCGGGCGGTTTCTGTTTGCAGGTTGCTTTGGAGGCATTTTCCTTCGCGAACAGCTGATGGCAGTGGGTGTCCGACTCCTTGTACTTTAGATCGATCGCGGTAAATTCGTCGGCAGACGACAT                                       ]
[-] EMBL BX621630             [                                                                          AGTACGGCTTGAATCGCTTTGCTTTCTTGATCTGTTCCATCTTCTTCAAATCCCGGTCGTACTTTTTCCGCAGGCTGATAATGTCGTTCTTCTTCGATTCGCGTATCTGGAAGGTGTAGAAATTTTTCAGCTCCTTTTCCGACTGGCCNTCGTACAGCTTCTTCTCCAGCCTCTTTACGACGCCCTGCGTTTGGGCAAAGACGCTGGAACTCTTCTTTGACACCGTC ACCCAACCGTCCTCATCGACCGCATTGTTGCTCTCT GCGGCCTTCTGCTCCTCAATCTTGCGATCGTACGATT CCATGTACT GGTCGATTTCCTGCTGCAGTGCGGCCGGGTTCGGGATGCGCTCGTGGTACGCCTTGGTCCACTTGTCCACCCCGGTGAGCAGTGGCCTCTCTTCCGTGTGCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAGCGCACCAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCATCCGCTCGATCGGGGCGGACTCTTTGCTGGAAGGCTTTTCCTGCAGCACCACGCGCTCGATTTCACCCGCCGAGGAGAATGCATGCTGCAGCGCTTGCTCTGTTGCGTACGGTGGCACATTTAGGACGTACAGCGTACGTCCGGGCGGTTTCTGTTTGCAGGTTGCTTTGGAGGCATTTTCCTTCGCGAACAGCTGATGGCAGTGGGTGTCCGACTCCTTGTACTTTAGATCGATCGCGGTAAATTCATCGGCCGACGACATGGTGTTGCTGGGGAGTTT                     ]
[-] EMBL CNS09RYE             [                                                                                                                                                                                                                                                        tcACGACGCCCTGCGTTTGGGCAAAGACGCCAGAACTTTTCTTCGACACCGTC ACCCAACCGTCCTCATCGACCGCATTGTTGCTCTCT GCGGCCTTCTGCTCCTCAATCTTGCGATCGTACGATT CCATGTACT GGTCGATTTCCTGCTGCAGTGCGGCCGGGTTCGGGATGCGCTCGTGGTACGCCTTGGTCCACTTGTCCACCCCGGTGAGCAGTGGCCTCTCTTCCGTGTGCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAGCGCACCAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCATCCGCTCGATCGGGGCGGACTCTTTGCTGGAAGGCTTTTCCTGCAGCACCACGCGCTCGATTTCACCCGCCGCGGAGAATGCATGCTGCAGCACTTGCTCTGTTGCATACGGTGGCACATTCAGGACGTACAGCGTACGCCCGGGCGGTTTCTGTTTGCAGGTTGCTTTGGAGGCATTTTCCTTCGCGAACAGCTGATGGCAGTGGGTGTCCGACTCCTTGTACTTTAGATCGATCGCGGTAAATTCATCGGCCGACGACATGGTGTTGCAGGGGAGTTTAGAATTATCGAAACCAGTAGG]
[-] EMBL BM611519             [                                                                                                                                                                                                                                                                                                                                               TCT GCGGCCTTCTGCTCCTCAATCTTGCGATCGTACGATT CCATGTACT GGTCGATTTCCTGCTGCAGTGCGGCCGGGTTCGGGATGCGCTCGTGGTACGCCTTGGTCCACTTGTCCACCCCGGTGAGCAGTGGCCTCTCTTCCGTGTGCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAGCGCACCAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCATCCGCTCGATCGGGGCGGACTCTTTGCTGGAAGGCTTTTCCTGCAGCACCACGCGCTCGATTTCACCCGCCGAGGAGAATGCATGCTGCAGCGCTTGCTCTGTTGCGTACGGTGGCACATTTAGGACGTACAGCGTACGTCCGGGCGGTTTCTGTTTGCAGGTTGCTTTGGAGGCATTTTCCTTCGCGAACAGCTGATGGCAGTGGGTGTCCGACTCCTTGTACTTTAGATCGATCGCGGcgg                                                          ]




>consensus_8555#1
CGCACATGCTGTCNTGTTGTTGGAATTTTTTAAGATCGAGCAATGACAAGGGATTTATTT
TCTGACACGCTTTTAGTACGGCTTGAATCGCTTTGCTTTCTTGATCTGTTCCATCTTCTT
CAAATCCCGGTCGTACTTTTTCCGCAGGCTGATAATGTCGTTCTTCTTCGATTCGCGTAT
CTGGAAGGTGTAGAAATTTTTCAGCTCCTTTTCCGACTGGCCCTCGTACAGCTTCTTCTC
CAGCCTCTTTACGACGCCCTGCGTTTGGGCAAAGACGCTGGAACTCTTCTTTGACACCGT
CACCCAACCGTCCTCATCGACCGCATTGTTGCTCTCTGCGGCCTTCTGCTCCTCAATCTT
GCGATCGTACGATTCCATGTACTGGTCGATTTCCTGCTGCAGTGCGGCCGGGTTCGGGAT
GCGCTCGTGGTACGCCTTGGTCCACTTGTCCACCCCGGTGAGCAGTGGCCTCTCTTCCGT
GTGCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAGCGCACCAGGCTTTGCAAA
CACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCATCCGCTCGATCGGGGCGGA
CTCTTTGCTGGAAGGCTTTTCCTGCAGCACCACGCGCTCGATTTCACCCGCCGAGGAGAA
TGCATGCTGCAGCGCTTGCTCTGTTGCGTACGGTGGCACATTTAGGACGTACAGCGTACG
TCCGGGCGGTTTCTGTTTGCAGGTTGCTTTGGAGGCATTTTCCTTCGCGAACAGCTGATG
GCAGTGGGTGTCCGACTCCTTGTACTTTAGATCGATCGCGGTAAATTCATCGGCCGACGA
CATGGTGTTGCTGGGGAGTTTAGAATTATCGAAACCAGTAGG

consensusID : consensus_8555#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 666
fasta sequence

                              [TCCTTTTCCGACTGGCCTTCGTACAGCTTCTTCTCCAGCTTCTTCACGACGCCCTGCGTTTGGGCAAAGACGCCGGAACTCTTCTTCGACACCGTCACCCAACCGTCCTCATCGACCGCATTGTTGCTCTCTGCGGCCTTCTGCTCCTCAATCTTGCGATCGTACGATTCCATGTACTGGTCGATTTCCTGCTGCAGTGCGGCCGGGTTCGGGATGCGCTCGTGGTACGCCTTGGTCCACTTGTCCACCCCGGTGAGCAGTGGCCTCTCTTCCGTGTGCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAGCGCACCAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCATCCGCTCGATCGGGGCGGACTCTTTGCTGGAAGGCTTTTCCTGCAGCACCACGCGCTCGATTTCACCCGCCGAGGAGAATGCATGCTGCAGCGCTTGCTCTGTTGCGTACGGTGGCACATTCAGGACGTACAGCGTACGTCCGGGCGGTTTCTGTTTGCAGGTTGCTTTGGAGGCATTTTCCTTCGCGAACAGCTGATGGCAGTGGGTGTCCGACTCCTTGTACTTTAGATCGATCGCGGTAAATTCGTCGGCAGACGACATGCGGACGCGTGGGCGGACGCGTGGGCGG]

[-] EMBL BM596955             [TCCTTTTCCGACTGGCCTTCGTACAGCTTCTTCTCCAGCTTCTTCACGACGCCCTGCGTTTGGGCAAAGACGCCGGAACTCTTCTTCGACACCGTCACCCAACCGTCCTCATCGACCGCATTGTTGCTCTCTGCGGCCTTCTGCTCCTCAATCTTGCGATCGTACGATTCCATGTACTGGTCGATTTCCTGCTGCAGTGCGGCCGGGTTCGGGATGCGCTCGTGGTACGCCTTGGTCCACTTGTCCACCCCGGTGAGCAGTGGCCTCTCTTCCGTGTGCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAGCGCACCAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCATCCGCTCGATCGGGGCGGACTCTTTGCTGGAAGGCTTTTCCTGCAGCACCACGCGCTCGATTTCACCCGCCGAGGAGAATGCATGCTGCAGCGCTTGCTCTGTTGCGTACGGTGGCACATTCAGGACGTACAGCGTACGTCCGGGCGGTTTCTGTTTGCAGGTTGCTTTGGAGGCATTTTCCTTCGCGAACAGCTGATGGCAGTGGGTGTCCGACTCCTTGTACTTTAGATCGATCGCGGTAAATTCGTCGGCAGACGACATGCGGACGCGTGGGCGGACGCGTGGGCGG]




>consensus_8555#2
TCCTTTTCCGACTGGCCTTCGTACAGCTTCTTCTCCAGCTTCTTCACGACGCCCTGCGTT
TGGGCAAAGACGCCGGAACTCTTCTTCGACACCGTCACCCAACCGTCCTCATCGACCGCA
TTGTTGCTCTCTGCGGCCTTCTGCTCCTCAATCTTGCGATCGTACGATTCCATGTACTGG
TCGATTTCCTGCTGCAGTGCGGCCGGGTTCGGGATGCGCTCGTGGTACGCCTTGGTCCAC
TTGTCCACCCCGGTGAGCAGTGGCCTCTCTTCCGTGTGCAGCGCGTTGATAGATTTCGTT
TTGAGCAGCTTTCGGAGCGCACCAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAA
AACACATCCTTGTCCATCCGCTCGATCGGGGCGGACTCTTTGCTGGAAGGCTTTTCCTGC
AGCACCACGCGCTCGATTTCACCCGCCGAGGAGAATGCATGCTGCAGCGCTTGCTCTGTT
GCGTACGGTGGCACATTCAGGACGTACAGCGTACGTCCGGGCGGTTTCTGTTTGCAGGTT
GCTTTGGAGGCATTTTCCTTCGCGAACAGCTGATGGCAGTGGGTGTCCGACTCCTTGTAC
TTTAGATCGATCGCGGTAAATTCGTCGGCAGACGACATGCGGACGCGTGGGCGGACGCGT
GGGCGG

consensusID : consensus_8555#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 493
fasta sequence

                              [CTTCTGCTCCTCAATCTTGCGATCGTACGATTCCATGTACTGGTCGATTTCCTGCTGCAGTGCGGCCGGGTTCGGGATGCGCTCGTGGTACGCCTTGGTCCACTTGTCCACCCCGGTGAGCAGTGGCCTCTCTTCCGTGTGCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAGCGCACCAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCATCCGCTCGATCGGGGCGGACTCTTTGCTGGAAGGCTTTTCCTGCAGCACCACGCGCTCGATTTCACCCGCCGAGGAGAATGCATGCTGCAGCGCTTGCTCTGTTGCGTACGGTGGCACATTTAGGACGTACAGCGTACGTCCGGGCGGTTTCTGTTTGCAGGTTGCTTTGGAGGCATTTTCCTTCGAGAACAGCTGATGGCAGTGGGTGTCCGACTCCTTGTACTTTAGATCGATCGCGCGGACGCGTGGGTCG]

[-] EMBL BM621005             [CTTCTGCTCCTCAATCTTGCGATCGTACGATTCCATGTACTGGTCGATTTCCTGCTGCAGTGCGGCCGGGTTCGGGATGCGCTCGTGGTACGCCTTGGTCCACTTGTCCACCCCGGTGAGCAGTGGCCTCTCTTCCGTGTGCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAGCGCACCAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCATCCGCTCGATCGGGGCGGACTCTTTGCTGGAAGGCTTTTCCTGCAGCACCACGCGCTCGATTTCACCCGCCGAGGAGAATGCATGCTGCAGCGCTTGCTCTGTTGCGTACGGTGGCACATTTAGGACGTACAGCGTACGTCCGGGCGGTTTCTGTTTGCAGGTTGCTTTGGAGGCATTTTCCTTCGAGAACAGCTGATGGCAGTGGGTGTCCGACTCCTTGTACTTTAGATCGATCGCGCGGACGCGTGGGTCG]




>consensus_8555#3
CTTCTGCTCCTCAATCTTGCGATCGTACGATTCCATGTACTGGTCGATTTCCTGCTGCAG
TGCGGCCGGGTTCGGGATGCGCTCGTGGTACGCCTTGGTCCACTTGTCCACCCCGGTGAG
CAGTGGCCTCTCTTCCGTGTGCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAG
CGCACCAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCAT
CCGCTCGATCGGGGCGGACTCTTTGCTGGAAGGCTTTTCCTGCAGCACCACGCGCTCGAT
TTCACCCGCCGAGGAGAATGCATGCTGCAGCGCTTGCTCTGTTGCGTACGGTGGCACATT
TAGGACGTACAGCGTACGTCCGGGCGGTTTCTGTTTGCAGGTTGCTTTGGAGGCATTTTC
CTTCGAGAACAGCTGATGGCAGTGGGTGTCCGACTCCTTGTACTTTAGATCGATCGCGCG
GACGCGTGGGTCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8555#1      -------------CGCACATGCTGTCNTGTTGTTGGAATTTTTTAAGATCGAGCAATGAC 47
consensus_8555#2      ------------------------------------------------------------
consensus_8555#3      ------------------------------------------------------------
consensus_8555#0      CCCCAGCTCGGGCACTTGTGGCCTTTTTTTTTTTTTTTTTTTTTAAGATCGAGCAATGAC 60
                                                                                  

consensus_8555#1      AAGGGATTTATTTTCTGACACGCTTTTAGTACGGCTTGAATCGCTTTGCTTTCTTGATCT 107
consensus_8555#2      ------------------------------------------------------------
consensus_8555#3      ------------------------------------------------------------
consensus_8555#0      AAGGGATTTATTTTCTGACACGCTTTTAGTACGGCTTGAATCGCTTTGCTTTCTTGATCT 120
                                                                                  

consensus_8555#1      GTTCCATCTTCTTCAAATCCCGGTCGTACTTTTTCCGCAGGCTGATAATGTCGTTCTTCT 167
consensus_8555#2      ------------------------------------------------------------
consensus_8555#3      ------------------------------------------------------------
consensus_8555#0      GTTCCATCTTCTTCAAATCCCGGTCGTACTTTTTCCGCAAGCTGATAATGTCGTTCTTCT 180
                                                                                  

consensus_8555#1      TCGATTCGCGTATCTGGAAGGTGTAGAAATTTTTCAGCTCCTTTTCCGACTGGCCCTCGT 227
consensus_8555#2      --------------------------------------TCCTTTTCCGACTGGCCTTCGT 22
consensus_8555#3      ------------------------------------------------------------
consensus_8555#0      TCGATTCGCGTATCTGGAAGGTGTAGAAATTTTTCAGCTCCTTTTCCGACTGGCCCTCGT 240
                                                                                  

consensus_8555#1      ACAGCTTCTTCTCCAGCCTCTTTACGACGCCCTGCGTTTGGGCAAAGACGCTGGAACTCT 287
consensus_8555#2      ACAGCTTCTTCTCCAGCTTCTTCACGACGCCCTGCGTTTGGGCAAAGACGCCGGAACTCT 82
consensus_8555#3      ------------------------------------------------------------
consensus_8555#0      ACAGCTTCTTCTCCAGCCTCTTCACGACGCCCTGCGTTTGGGCAAAGACGCCAGAACTCT 300
                                                                                  

consensus_8555#1      TCTTTGACACCGTCACCCAACCGTCCTCATCGACCGCATTGTTGCTCTCTGCGGCCTTCT 347
consensus_8555#2      TCTTCGACACCGTCACCCAACCGTCCTCATCGACCGCATTGTTGCTCTCTGCGGCCTTCT 142
consensus_8555#3      -------------------------------------------------------CTTCT 5
consensus_8555#0      TCTTCGACACCGTCACCCAACCGTCCTCATCGACCGCATTGTTGCTCTCTGCGGCCTTCT 360
                                                                             *****

consensus_8555#1      GCTCCTCAATCTTGCGATCGTACGATTCCATGTACTGGTCGATTTCCTGCTGCAGTGCGG 407
consensus_8555#2      GCTCCTCAATCTTGCGATCGTACGATTCCATGTACTGGTCGATTTCCTGCTGCAGTGCGG 202
consensus_8555#3      GCTCCTCAATCTTGCGATCGTACGATTCCATGTACTGGTCGATTTCCTGCTGCAGTGCGG 65
consensus_8555#0      GCTCCTCAATCTTGCGATCGTACGATTCCATGTACTGGTCGATTTCCTGCTGCAGTGCGG 420
                      ************************************************************

consensus_8555#1      CCGGGTTCGGGATGCGCTCGTGGTACGCCTTGGTCCACTTGTCCACCCCGGTGAGCAGTG 467
consensus_8555#2      CCGGGTTCGGGATGCGCTCGTGGTACGCCTTGGTCCACTTGTCCACCCCGGTGAGCAGTG 262
consensus_8555#3      CCGGGTTCGGGATGCGCTCGTGGTACGCCTTGGTCCACTTGTCCACCCCGGTGAGCAGTG 125
consensus_8555#0      CCGGGTTCGGGATGCGCCCGTGGTACGCCCTGGTCCACTTTTCCACCCCTGTGAGCAGTG 480
                      ***************** *********** ********** ******** **********

consensus_8555#1      GCCTCTCTTCCGTGTGCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAGCGCAC 527
consensus_8555#2      GCCTCTCTTCCGTGTGCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAGCGCAC 322
consensus_8555#3      GCCTCTCTTCCGTGTGCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAGCGCAC 185
consensus_8555#0      GCCTCTCTTCCGTGTGCAGCGCGTTGATAGATTTCGTTTTGAGCAGCTTTCGGAGCGCAC 540
                      ************************************************************

consensus_8555#1      CAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCATCCGCT 587
consensus_8555#2      CAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCATCCGCT 382
consensus_8555#3      CAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCATCCGCT 245
consensus_8555#0      CAGGCTTTGCAAACACCACGTACGCCACCTTGAAGCAAAACACATCCTTGTCCATCCGCT 600
                      ************************************************************

consensus_8555#1      CGATCGGGGCGGACTCTTTGCTGGAAGGCTTTTCCTGCAGCACCACGCGCTCGATTTCAC 647
consensus_8555#2      CGATCGGGGCGGACTCTTTGCTGGAAGGCTTTTCCTGCAGCACCACGCGCTCGATTTCAC 442
consensus_8555#3      CGATCGGGGCGGACTCTTTGCTGGAAGGCTTTTCCTGCAGCACCACGCGCTCGATTTCAC 305
consensus_8555#0      CGATCGGGGCGGACTCTTTGCTGGAAGGCTTTTCCTGCAGCACCACGCGCTCGATTTCAC 660
                      ************************************************************

consensus_8555#1      CCGCCGAGGAGAATGCATGCTGCAGCGCTTGCTCTGTTGCGTACGGTGGCACATTTAGGA 707
consensus_8555#2      CCGCCGAGGAGAATGCATGCTGCAGCGCTTGCTCTGTTGCGTACGGTGGCACATTCAGGA 502
consensus_8555#3      CCGCCGAGGAGAATGCATGCTGCAGCGCTTGCTCTGTTGCGTACGGTGGCACATTTAGGA 365
consensus_8555#0      CCGCCGAGGAGAATGCATGCTGCAGCGCTTGCTCTGTTGCGTACGGTGGCACATTCAGGA 720
                      ******************************************************* ****

consensus_8555#1      CGTACAGCGTACGTCCGGGCGGTTTCTGTTTGCAGGTTGCTTTGGAGGCATTTTCCTTCG 767
consensus_8555#2      CGTACAGCGTACGTCCGGGCGGTTTCTGTTTGCAGGTTGCTTTGGAGGCATTTTCCTTCG 562
consensus_8555#3      CGTACAGCGTACGTCCGGGCGGTTTCTGTTTGCAGGTTGCTTTGGAGGCATTTTCCTTCG 425
consensus_8555#0      CGTACAGCGTACGCCCGGGCGGTTTCTGTTTGCAGGTTGCTTTGGAGGCATTTTCCTTCG 780
                      ************* **********************************************

consensus_8555#1      CGAACAGCTGATGGCAGTGGGTGTCCGACTCCTTGTACTTTAGATCGATCGCGGTAAATT 827
consensus_8555#2      CGAACAGCTGATGGCAGTGGGTGTCCGACTCCTTGTACTTTAGATCGATCGCGGTAAATT 622
consensus_8555#3      AGAACAGCTGATGGCAGTGGGTGTCCGACTCCTTGTACTTTAGATCGATCGCG-CGGACG 484
consensus_8555#0      CGAACAGCTGATGGCAGTGGGTGTCCGACTCCTTGTACTTTAGATCGATCGCGGTAAACT 840
                       ****************************************************    *  

consensus_8555#1      CATCGGCCGACGACA-TGGTGTTGCTGGGGAGTTTAGAATTATCGAAACCAGTAGG---- 882
consensus_8555#2      CGTCGGCAGACGACA-TGCGGACGCGTGGGCGGAC-GCGTGGGCGG-------------- 666
consensus_8555#3      CGTGGGTCG--------------------------------------------------- 493
consensus_8555#0      CGTCGGCAGACGACAATGGTGTTGCAGGGCAGTTTAGAATTCCAGTTGGCCAACAGTTCT 900
                      * * **  *                                                   

consensus_8555#1      ----------
consensus_8555#2      ----------
consensus_8555#3      ----------
consensus_8555#0      CGAGGAATTC 910