|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8557#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1683 fasta sequence
[CGCACATGCTGTCTTTTTGTTTNATATTTTTTTTTTTATGTGCCAAGGTTTTCTTTATTTTTTATTTGATTATTGCATGAACATGGGTTCTTTGTAAGGTTGTCAAAAATGAGCATGAGCAGAGGCGGGTTTAGGGTGTCGAGAGACCTAAGGCAGTATGAAGAGATGACTTGCTATTCCCAGCTCTTCTGTTCACGGGCCTTTCTTCCTGGTGGGTAGAGAGGGTAGGAGGGGGGGAGGTACTTGGGCTACAGCCGTTCAGTCCTCTAACCGTTTAATCCGCTTCTATACATAAGGTTAATGTCGTTAATTTGAGGGCTGTTATTGTCTTTGTTTCAAGAGTTCTTTCTTAAATTCATAGTTAATCACTTGAATAATTATAAGGACTTTGACTATTGTGTTAACATTAAAAGAAACCACCATTAAGATTAAACGAAAAAAAACAAGAAATTTCCTATGCTCGTTCGTAAAATAAAACATATGCATTTGAGGTGACTAAATTACGCTCGAACGCCTCTGTGACATAGTTATCATTGAACTCATTCCATTGTTGAGTTTGTGGGTGTTTGCAAACAGCTACGTAATGCCCACCAGCAGTAGATCCCATATGATTCGAAATTCCATACAGTGAATAGTATATTGGTCCCGAAATGTCTTCTGAGGCATAAGGTTGCAGATTAAGAGCTCGATTTTTGGTAGGAAACTCAACAATATTGGTCAATTTGCTCCAACGTGCTTCCGAAAATCTTTTAAGATGTATTACTAAATACCGTGGAAAACGTTCGATCGTCAATCTTTTAGTGCATTTTCGACGTGTATCGCAATTCGAACACGTAGGTTGATCTATTCCATCCATAATCTCCTCCTTGATAAACATTTCGAGACAGTTTTCCAGCTTGCAACGGGAACTTGATGATGGTAGAGGTAGACTTAAATCCCAAAATGGATCAAACATAGTACTTTCCATATTGCAAAACGTACACTTGAGCGTACTTCTTAACTGCCCGACAAACAGATCCTTTATCATTGAATTTTCTGCCTTAGAATACCATTCCCACAGCATATCTGCTTTATCCTTGTTGTTCATGTTATCGTCAATTTCAGACAAGGGATCCCGCTTGATAGCAGCATTCAAAGCACCATGTAAAGAATCTAAGAAAAACCTTAAAAACTCTTGGGCATCTTGTTGGGCTGATCCTGAATACATTCGGTGTTTGCTAGAGAAAGCGTATTTTAAGTCGGATGGATTAATGCTCCGTTGTGTTCCACTCCACATATTTTTGATAAGCTTTGTGTATTCTGCTAATATAAGATGATCTTTACTAGTACCTCTTTCAGATGATGATTGACCTCGTAGAAATGATGTAAGTTCTCGGGTGTGACTGAGGCATTGAATCATTGAGTTCATGAAGCAAGTATTACCAATATTCCATAGACCACATAAACCTGTTATTATGCCACATAACCGAAGCATGCCTGCGCGAAACAACGTCGATGAGGAAATTGCTTATG--ATTTGCTTTAAACAATTCCATAATTTCATTATTAAAATAATAATTACTAATTGTTGTATTCATAGACTTAATTGTATGGTTTTATATAAGTTTGAGCACGAATTAGCTGATATTATTACTTTCTTTATAATCAAATATGCGTTGATTCAATTATATTTAGAAGTATACCGG]
[+] EMBL BX466769 [CGCACATGCTGTCTTTTTGTTTNATATTTTTTTTTTTATGTGCCAAGGTTTTCTTTATTTTTTATTTGATTATTGCATGAACATGGGTTCTTTGTAAGGTTGTCAAAAATGAGCATGAGCAGAGGCGGGTTTAGGGTGTCGAGAGACCTAAGGCAGTATGAAGAGATGACTTGCTATTCCCAGCTCTTCTGTTCACGGGCCTTTCTTCCTGGTGGGTAGAGAGGGTAGGAGGGGGGGAGGTACTTGGGCTACAGCCGTTCAGTCCTCTAACCGTTTAATCCGCT ]
[-] EMBL BX625673 [ ATGAACATGGGTTCTTTGTAAGGTTGTCAAAAATGAGCATGAGCAGAGGCGGGTTTAGGGTGTCGAGAGACNTAA GCAGTATGAAGAGATGACTTGCTATTCCCAGCTCTTCTGTTCACGGGCCTTTCTTCCTGGTGGGTAGAGAGGGTAGGAGGGGGGGAGGTACTTGGGCTACAGCCGTTCAGTCCTCTAACCGTTTAATCCGCTTCTATACATAAGGTTAATGTCGTTAATTTGAGGGCTGTTATTGTCTTTGTTTCAAGAGTTCTTTCTTAAATTCATAGTTAATCACTTGAATAATTATAAGGACTTTGACTATTGTGTTAACATTAAAAGAAACCACCATTAAGATTAAACGAAAAAAAACAAGAAATTTCCTATGCTCGTTCGTAAAATAAAACATATGCATTTGAGGTGACTAAATTACGCTCGAACGCCTCTGTGACATAGTTATCATTGAACTCATTCCATTGTTGAGTTTGTGGGTGTTTGCAAACAGCTACGTAATGCCCACCAGCAGTAGATCCCATATGATTCGAAATTCCATACAGTGAATAGTATATTGGTCCCGAAATGTCTTCTGAGGCATAAGGTTGCAGATTAAGAGCTCGATTTTTGGTAGGAAACTCAACAATATTGGTCAATTTGCTCCAACGTGCTTCCGAAAATCTTTTAAGATGTATTACTAAATACCGTGGAAAACGTTCGATCGTCAATCTTTTAGTGCATTTTCGACGTGTATCGCAATTCGAACACGTAGGc ]
[-] EMBL BX625437 [ AAATTACGCTCGAACGCCTCTGTGACATAGTTATCATTGAACTCATTCCATTGTTGAGTTTGTGGGTGTTTGCAAACAGCTACGTAATGCCCACCAGCAGTAGATCCCATATGATTCGAAATTCCATACAGTGAATAGTATATTGGTCCCGAAATGTCTTCTGAGGCATAAGGTTGCAGATTAAGAGCTCGATTTTTGGTAGGAAACTCAACAATATTGGTCAATTTGCTCCAACGTGCTTCCGAAAATCTTTTAAGATGTATTACTAAATACCGTGGAAAACGTTCGATCGTCAATCTTTTAGTGCATTTTCGACGTGTATCGCAATTCGAACACGTAGGTTGATCTATTCCATCCATAATCTCCTCCTTGATAAACATTTCGAGACAGTTTTCCAGCTTGCAACGGGAACTTGATGATGGTAGAGGTAGACTTAAATCCCAAAATGGATCAAACATAGTACTTTCCATATTGCAAAACGTACACTTGAGCGTACTTCTTAACTGCCCGACAAACAGATCCTTTATCATTGAATTTTCTGCCTTAGAATACCATTCCCACAGCATATCTGCTTTATCCTTGTTGTTCATGTTATCGTCAATTTCAGACAAGGGATCCCGCTTGATAGCAGCATTCAAAGCACCAT ]
[-] EMBL BX621739 [ TCTTTTAGTGCA TTTCGACGTGTATCGCAATTCGAACACGTAGGTTGATCTATTCCATCCATAATCTCCTCCTTGATAAACATTTCGAGACAGTTTTCCAGCTTGCAACGGGAACTTGATGATGGTAGAGGTAGACTTAAATCCCAAAATGGATCAAACATAGTACTTTCCATATTGCAAAACGTACACTTGAGCGTACTTCTTAACTGCCCGACAAACAGATCCTTTATCATTGAATTTTCTGCCTTAGAATACCATTCCCACAGCATATCTGCTTTATCCTTGTTGTTCATGTTATCGTCAATTTCAGACAAGGGATCCCGCTTGATAGCAGCATTCAAAGCACCATGTAAAGAATCTAAGAAAAACCTTAAAAACTCTTGGGCATCTTGTTGGGCTGATCCTGAATACATTCGGTGTTTGCTAGAGAAAGCGTATTTTAAGTCGGATGGATTAATGCTCCGTTGTGTTCCACTCCACATATTTTTGATAAGCTTTGTGTATTCTGCTAATATAAGATGATCTTTACTAGTACCTCTTTCAGATGATGATTGACCTCGTAGAAATGATGTAAGTTCTCGGGTGTGACTGAGGCATTGAATCATTGAGTTCATGAAGCAAGTATTACCAATATTCCATAGACCACATAAACCTGTTATTATGCCACATAACCGAAGCATGCCTGCGCGAAACAACGTCGATGAGGAAATTGCTTATG ATTTGCTTTAAACAATTCCATAATTTCATTATTAAAATAATAATTACTAA ]
[-] EMBL BM623333 [ TTTCTGCCTTAGAATACCATTCCCACAGCATATCTGCTTTATCCTTGTTGTTCATGTTATCGTCAATTTCAGACAAGGGATCCCGCTTGATAGCAGCATTCAAAGCACCATGTAAAGAATCTAAGAAAAACCTTAAAAACTCTTGGGCATCTTGTTGGGCTGATCCTGAATACATTCGGTGTTTGCTAGAGAAAGCGTATTTTAGGTCGGATGGATTAATGCTCCGTTGTGTTCCACTCCACATATTTTTGATAAGCTTTGTGTATTCTGCTAATATAAGATGATCTTTACTAGTACCTCTTTCAGATGATGATTGACCTCGTAGAAATGATGTAAGTTCTCGGGTGTGACTGAGGCATTGAATCATTGAGTTCATGAAGCAAGTATTACCAATATTCCACAGACCACATAAACCTGTTATTATGCCACATAACCGAAGCATGCCTGCGAGAAACAACGTCGATGAGGAAATTGCTTATGACATTTGCTTTAAACAATTCCATAATTTCATTATTAAAATAATAATTGCTAATTGTTGTATTCATAGACTTAATTGTATGGTTTTATATAAGTTTGAGCACGAATTAGCTGATATTATTACTTTCTTTATAATCAAATATGCGTTGATTCAATTATATTTAGAAGTATACCGG]
consensusID : consensus_8557#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1462 fasta sequence
[AAGATGATCTTTACTAGTACCTCTTTCAGATGATGATTGACCTCGTAGAAATGATGTAAGTTCTCGGGTGTGACTGAGGCATTGAATCATTGAGTTCATGAAGCAAGTATTACCAATATTCCATAGACCACATAAACCTTCCTCTTGTGTTCCGTAGAGAATCATTGACTTCTGTACATCTTTCATAATTTAAACTGGGTTTTATAAGTCTAGCAGATGATGGCGATTTATTCGGATATTGATCATCTTCGCGTTCGTTTGTTTTTGGCGATGTTTGTTGTTTGTTCAAGTTTATTCTGGGTTGAAGTTGAGTGGCCTGATCATCTTCGCATTCTTTGCTTGTTTCAATGCTTTTGTTCAAGGCTCTATCTGTCTCCTTACTGGCTTCATTTAATGTTGCAGGTATGAGCACATCTTCCGTAACATTTTTATTCACGTTTCGAATTATATCATTTCCAAACAATACGTTGCTACGCTTAGGGATTCGATTGAATTGATTTTTTTCGCTTGATACATCATCACAAGGATTTTCAGTGGCCCATGTTAAGATGGTATTA-GTTTCGATGTTTTATCAGAAGCTGACACATTTCTTTTCACTTGTTCACA-TTTTTGTT-CCATGATACTATTAGCATTGGCATTGGCATCTTT-CCTGATATTGCTTTGCGGCTTTATACGTATTGTTGCCGAAACATGTAGATTTGCAGAGTCACTGGCAATGATTTCTTTTTCTTTGTATCCTTCTCTCATTAAATCATCAGTCGTTACAGTTGCAGTCACTATCGCAGAGGACGACTGTATGCAAGAATCAATTGAATCTTTTGCATCACAGTGTTTATCGATTGATTGACTATTGTAACTTGAATTCGATGAACTCTCTAAAGAAGACTGTGCACGTAGATTGACCGTTTCCTTGCTTCTGCTGTTGTGAAGCTTTTCTTCTGATAAATCAGTACTCGATGTTTCTAATGATGAGCTTGCGGAATTCGCTTTGGGAAACCTTCCAGAATATGCTAAACTCAACTGAGTTATACGTGATGAAACACTAGCAGCAGGTTTATACGTCGAAAGACTGTATCGTTGATAGATTTCAGCTCCACATAACGCTGTGTTACGTATATTCGAAACGTAGCTACTGTTATTTCTCAGGCTTGTCGTTGA----ACTGTTGCGATAAAGACTACTGTTTCGAAAACTGCTAGTCTTAGTACTGTTCACGGGCGGTGAGTAGTATACACGATCGGAGAAACTTGATTTTGAGAATTGGCTTGCAGGTGGTTGAATGTATCGACTACCACTAGACGAGTACGTTGATGTGACTGGCATATTCCACCTTCTTTTACGTTAATCTGCTTTTCATAAGATGAATTAGTGTGCTATAATCGAACGCTCTAAACACTGCGTGGTACGATTTCACACTCACACGATCACACTCACAAACGAATTCGACATTAACACTTCATGCCGG]
[-] EMBL BM639897 [AAGATGATCTTTACTAGTACCTCTTTCAGATGATGATTGACCTCGTAGAAATGATGTAAGTTCTCGGGTGTGACTGAGGCATTGAATCATTGAGTTCATGAAGCAAGTATTACCAATATTCCATAGACCACATAAACCTTCCTCTTGTGTTCCGTAGAGAATCATTGACTTCTGTACATCTTTCATAATTTAAACTGGGTTTTATAAGTCTAGCAGATGATGGCGATTTATTCGGATATTGATCATCTTCGCGTTCGTTTGTTTTTGGCGATGTTTGTTGTTTGTTCAAGTTTATTCTGGGTTGAAGTTGAGTGGCCTGATCATCTTCGCATTCTTTGCTTGTTTCAATGCTTTTGTTCAAGGCTCTATCTGTCTCCTTACTGGCTTCATTTAATGTTGCAGGTATGAGCACATCTTCCGTAACATTTTTATTCACGTTTCGAATTATATCATTTCCAAACAATACGTTGCTACGCTTAGGGATTCGATTGAATTGATTTTTTTCGCTTGATACATCATCACAAGGATTTTCAGTGGCCCATGTTAAGATGGTATTAGGTTTCGATGTTTTATCAGAAGCTGACACATTTCTTTTCACTTGTTCACA TTTTTCTT CCATGATACTATTAGCATTGGCATTGGCATCTTT Cgg ]
[-] EMBL BM645952 [ GGTATTA GTTTCGATGTTTTATCAGAAGCTGACACATTTCTTTTCACTTGTTCACATTTTTTGTTGCCATGATACTATTAGCATTGGCATTGGCATCTTTGCCTGATATTGCTTTGCGGCTTTATACGTATTGTTGCCGAAACATGTAGATTTGCAGAGTCACTGGCAATGATTTCTTTTTCTTTGTATCCTTCTCTCATTAAATCATCAGTCGTTACAGTTGCAGTCACTATCGCAGAGGACGACTGTATGCAAGAATCAATTGAATCTTTTGCATCACAGTGTTTATCGATTGATTGACTATTGTAACTTGAATTCGATGAACTCTCTAAAGAAGACTGTGCACGTAGATTGACCGTTTCCTTGCTTCTGCTGTTGTGAAGCTTTTCTTCTGATAAATCAGTACTCGATGTTTCTAATGATGAGCTTGCGGAATTCGCTTTGGGAAACCTTCCAGAATATGCTAAACTCAACTGAGTTATACGTGATGAAACACTAGCAGCAGGTTTATACGTCGAAAGACTGTATCGTTGATAGATTTCAGCTCCACATAACGCTGTGTTACGTATATTCGAAACGTAGCTACTGTTATTTCTCAGGCTTGTCGTTGA ACTGTTGCGATAAAGACTACTGTTTCcgg ]
[-] EMBL BM646980 [ AGAAGCTGACACATTTCTTTTCACTTGTTCACA TTTTTGTT CCATGATACTATTAGCATTGGCATTGGCATCTTT CCTGATATTGCTTTGCGGCTTTATACGTATTGTTGCCGAAACATGTAGATTTGCAGAGTCACTGGCAATGATTTCTTTTTCTTTGTATCCTTCTCTCATTAAATCATCAGTCGTTACAGTTGCAGTCACTATCGCAGAGGACGACTGTATGCAAGAATCAATTGAATCTTTTGCATCACAGTGTTTATCGATTGATTGACTATTGTAACTTGAATTCGATGAACTCTCTAAAGAAGACTGTGCACGTAGATTGACCGTTTCCTTGCTTCTGCTGTTGTGAAGCTTTTCTTCTGATAAATCAGTACTCGATGTTTCTAATGATGAGCTTGCGGAATTCGCTTTGGGAAACCTTCCAGAATATGCTAAACTCAACTGAGTTATACGTGATGAAACACTAGCAGCAGGTTTATACGTCGAAAGACTGTATCGTTGATAGATTTCAGCTCCACATAACGCTGTGTTACGTATATTCGAAACGTAGCTACTGTTATTTCTCAGGCTTGTCGTTGA ACTGTTGCGATAAAGACTACTGTTTCGAAAACTGCTAGTCTTAGTACTGTTCACGG ]
[-] EMBL BM627192 [ TCCTTCTCTCATTAAATCATCAGTCGTTACAGTTGCAGTCACTATCGCAGAGGACGACTGTATGCAAGAATCAATTGAATCTTTTGCATCACAGTGTTTATCGATTGATTGACTATTGTAACTTGAATTCGATGAACTCTCTAAAGAAGACTGTGCACGTAGATTGACCGTTTCCTTGCTTCTGCTGTTGTGAAGCTTTTCTTCTGATAAATCAGTACTCGATGTTTCTAATGATGAGCTTGCGGAATTCGCTTTGGGAAACCTTCCAGAATATGCTAAACTCAACTGAGTTATACGTGATGAAACACTAGCAGCAGGTTTATACGTCGAAAGACTGTATCGTTGATAGATTTCAGCTCCACATAACGCTGTGTTACGTATATTCGAAACGTAGCTACTGTTATTTCTCAGGCTTGTCGTTGAACATACTGTTGCGATAAAGACTACTGTTTCGAAAACTGCTAGTCTTAGTACTGTTCAATAGCGGTGAGTAGTATACACGATCGGAGAAACTTGATTTTGAGAATTGGCTTGCAGGTGGTTGAATGTATCGACTACCACTAGACGAGTACGTTGATGTGACTGGCATATTCCACCTTCTTTTACGTTAATCTGCTTTTCATAAGATGAATTAGTGTGCTATAATCGAACGCTCTAAACACTGCGTGGTACGATTTCACACTCACACGATCACACTCACAAACGAATTCGACATTAACACTTCATGCCGG]
consensusID : consensus_8557#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 999 fasta sequence
[GCAGAATNGCCCGAGGTTAGAAAAAGAATCATTGCCAGTGACTCTGCTAAATCTACATGTTTCGGCAACAATACGTATAAAGCCGCAAAGCAATATCAGGAAAGATGCCAATGCCAATGCGAATAGTATCATGGAACAAAAATGTGAACAAGTGAAAAGAAATGTGTCAGCTTCTGACTAAAACATTCGAAAAACTAATAACTGGCAACATTCACACTGACACGGCCCAGTTAAGGAGGACAGATAAGAGGCCTTGGAACAAAAAAGCATTGACACAACCAANGCAACAAAGAACTTGCCGAAAGATTGATCAGGCCCAACTCAAACCTTACAACCCCAGAAATTAAACTTTGGAAACAAAACTAAACAAACCATTCGGGCAAAAAACAAACCGAAANCGCGGGAAGCATTGATACAAATTATTCCCGACACTAAAAATTCGCCAATCATCCTGCTAACNACCTTTATTAACCAAGANCCCCAAGCGTTNTTACAACTTTCATTGNACACAGNGGATTGCTACCAGGCACACGGTTCCAAAGTGGCACTTTCCTCCTTAACGGCGAAGCACCAAAGAGGCAAAGCGTATCACTAATGCTNGGGTTCCTAATTGGCGACTACTACTGGGGTAAACATTACCNTTGGGCTGTACCAACTTNGNCAAAACCATTCCAACAATTGGCATCTTCTCCAACAANTTGGGCCCCTCCCAAAGGATTACCCAAACNAAAACCCCACCTGGAAACGCTAATACACACCACTTATTTAACACCCACATATCCCCAATATATCAGTACCTTAACACCGGGAACAGTAGCTTACCACAAAAACTNACCAATTTACCAATTATACCTTGCAAACAAACAAANCGACANGGGTGTCACACTTCAAGAGGNTTAACATCACAACGGCAATTTCCAAATTACCCCTTACTACACATTTAANTTATTATCACACGACCCCACGNCTAAACTTAACCACAACCAACAAACATGGANC]
[+] EMBL AL929814 [GCAGAATNGCCCGAGGTTAGAAAAAGAATCATTGCCAGTGACTCTGCTAAATCTACATGTTTCGGCAACAATACGTATAAAGCCGCAAAGCAATATCAGGAAAGATGCCAATGCCAATGCGAATAGTATCATGGAACAAAAATGTGAACAAGTGAAAAGAAATGTGTCAGCTTCTGACTAAAACATTCGAAAAACTAATAACTGGCAACATTCACACTGACACGGCCCAGTTAAGGAGGACAGATAAGAGGCCTTGGAACAAAAAAGCATTGACACAACCAANGCAACAAAGAACTTGCCGAAAGATTGATCAGGCCCAACTCAAACCTTACAACCCCAGAAATTAAACTTTGGAAACAAAACTAAACAAACCATTCGGGCAAAAAACAAACCGAAANCGCGGGAAGCATTGATACAAATTATTCCCGACACTAAAAATTCGCCAATCATCCTGCTAACNACCTTTATTAACCAAGANCCCCAAGCGTTNTTACAACTTTCATTGNACACAGNGGATTGCTACCAGGCACACGGTTCCAAAGTGGCACTTTCCTCCTTAACGGCGAAGCACCAAAGAGGCAAAGCGTATCACTAATGCTNGGGTTCCTAATTGGCGACTACTACTGGGGTAAACATTACCNTTGGGCTGTACCAACTTNGNCAAAACCATTCCAACAATTGGCATCTTCTCCAACAANTTGGGCCCCTCCCAAAGGATTACCCAAACNAAAACCCCACCTGGAAACGCTAATACACACCACTTATTTAACACCCACATATCCCCAATATATCAGTACCTTAACACCGGGAACAGTAGCTTACCACAAAAACTNACCAATTTACCAATTATACCTTGCAAACAAACAAANCGACANGGGTGTCACACTTCAAGAGGNTTAACATCACAACGGCAATTTCCAAATTACCCCTTACTACACATTTAANTTATTATCACACGACCCCACGNCTAAACTTAACCACAACCAACAAACATGGANC]
consensusID : consensus_8557#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 823 fasta sequence
[GGTGAGCTAGAGTTACGCTCGACGCCTCTGGTGACATAGTTATCATTGAAGCCTCATNTCCATTGTTGAGTTTGTGGGTGTTTGCAACAGCTACGTAATGCCCACCAGCAGTAGATNGCCAGGGTGATTCGNGAGTNCCACTNCACGTGAATAGTATATTGGTCCCGAAATGTCTTCTGAGGCATAAGGTTGCAGATTAAGAGCTCGATTTTTGGTAGGATAAGCTCGGACCAGATATTGGTCAATTTGCTCCAACGTGCTTCCGAAAAGTGCGNGGNGNTAAGAGTGTAGTTACTNAATGACCGTGGAAACGTTCGATCGTCAATGCGTTGTTAGTGCATNGGTGTGCGACGTGTATCGCAAATTCGAACACGTAGGTTGATCGTAGTTCCAAGTCCATAATCGTCCGTCCTTTGATAGAACAGTTTGCGAGACAAGTTGTTCCAAGCTTGCAACGGGAACTTGATGATGGTAGAGGTAGACTTAAAGTCCACAATGGATCAAACATAGTACTTTCCATATTGCAAAACGTACACTTGAGCGTACTTCGTTAACTGCCCGACANGACAGATCCGTTTATCATTGAATTTTCTGCACTTAGAATACCATTCCCACAGCATATCTGCATTTATCCATTGTTGTTACATGTTATCAGTCAAATTTCAGACAAGGGATCCACGCTTGATAGCAGCATTCAAAGCACCATGTAAAGAATCTAAGAAAAACCTTAAAAACTCTTGGGCATCATTGTTGGGCTGATCCTGAATACATTCGGTGTTTGCTAGAGAAAGCGTATTTTAAGTCGGATGGATAATGCTCCGTT]
[-] EMBL AL931510 [GGTGAGCTAGAGTTACGCTCGACGCCTCTGGTGACATAGTTATCATTGAAGCCTCATNTCCATTGTTGAGTTTGTGGGTGTTTGCAACAGCTACGTAATGCCCACCAGCAGTAGATNGCCAGGGTGATTCGNGAGTNCCACTNCACGTGAATAGTATATTGGTCCCGAAATGTCTTCTGAGGCATAAGGTTGCAGATTAAGAGCTCGATTTTTGGTAGGATAAGCTCGGACCAGATATTGGTCAATTTGCTCCAACGTGCTTCCGAAAAGTGCGNGGNGNTAAGAGTGTAGTTACTNAATGACCGTGGAAACGTTCGATCGTCAATGCGTTGTTAGTGCATNGGTGTGCGACGTGTATCGCAAATTCGAACACGTAGGTTGATCGTAGTTCCAAGTCCATAATCGTCCGTCCTTTGATAGAACAGTTTGCGAGACAAGTTGTTCCAAGCTTGCAACGGGAACTTGATGATGGTAGAGGTAGACTTAAAGTCCACAATGGATCAAACATAGTACTTTCCATATTGCAAAACGTACACTTGAGCGTACTTCGTTAACTGCCCGACANGACAGATCCGTTTATCATTGAATTTTCTGCACTTAGAATACCATTCCCACAGCATATCTGCATTTATCCATTGTTGTTACATGTTATCAGTCAAATTTCAGACAAGGGATCCACGCTTGATAGCAGCATTCAAAGCACCATGTAAAGAATCTAAGAAAAACCTTAAAAACTCTTGGGCATCATTGTTGGGCTGATCCTGAATACATTCGGTGTTTGCTAGAGAAAGCGTATTTTAAGTCGGATGGATAATGCTCCGTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8557#0 CGCACATGCTGTCTTTTTGTTTNATATTTTTTTTTTTATGTGCCAAGGTTTTCTTTATTT 60
consensus_8557#3 ------------------------------------------------------------
consensus_8557#1 --AAGATGATCTTTACTAGTACCTCTTTCAGATGATGATTGACCTCGTAGAAATGATGTA 58
consensus_8557#2 ------------------------------------------------------------
consensus_8557#0 TTTATTTGATTATTGCATGAACATGGGTTCTTTGTAAGGTTGTCAAAAATGAGCATGAGC 120
consensus_8557#3 ------------------------------------------------------------
consensus_8557#1 AGTTCTCGGGTGTGACTGAGGCATTGAATCATTG--AGTTCAT--GAAGCAAGTATTACC 114
consensus_8557#2 ------------------------------------------------------------
consensus_8557#0 AGAGGCGGGTTTAGGGTGTCGAGAGACCTAAGGCAGTATGAAGAGATGACTTGCTATTCC 180
consensus_8557#3 ------------------------------------------------------------
consensus_8557#1 AATATTCCATAGACCACATAAACCTTCCTCTTGTGTTCCGTAGAGAATCATTGACTTCTG 174
consensus_8557#2 ------------------------------------------------------------
consensus_8557#0 CAGCTCTTCTGTTCACGGGCCTTTCTTCCTGGTGGGTAGAGAGGGTAGGAGGGGGGGAGG 240
consensus_8557#3 ------------------------------------------------------------
consensus_8557#1 TACATCTTTCATAATTTAAACTGGGTTTTATAAGTCTAGCAGATGATGGCGATTTATTCG 234
consensus_8557#2 ------------------------------------------------------------
consensus_8557#0 TACTTGGGCTACAGCCGTTCAGTCCTCTAACCGTTTAATCCGCTTCTATACATAAGGTTA 300
consensus_8557#3 ------------------------------------------------------------
consensus_8557#1 GATATTGATCATCTTCGCGTTCGTTTGTTTTTGGCGATGTTTGTTGTTTGTTCAAGTTTA 294
consensus_8557#2 ------------------------------------------------------------
consensus_8557#0 ATGTCGTT--AATTTGAGGGCTGTTATTGTCTTTGTTTCAAGAGTTCTTTCTTAAATTCA 358
consensus_8557#3 ------------------------------------------------------------
consensus_8557#1 TTCTGGGTTGAAGTTGAGTGGCCTGATCATCTTCGCATTCTTTGCTTGTTTCAATGCTTT 354
consensus_8557#2 ------------------------------------------------------------
consensus_8557#0 TAGTTAATCACTTGAATAATTA--TAAGGACTTTGACTATTGTGTTAACATTAAAAGAAA 416
consensus_8557#3 ------------------------------------------------------------
consensus_8557#1 TGTTCAAGGCTCTATCTGTCTCCTTACTGGCTTCATTTAATGTTGCAGGTATGAGCACAT 414
consensus_8557#2 ------------------------------------------------------------
consensus_8557#0 CCACCATTAAGATTAAACGAAAAAAAACAAGAAATTTCCTATGCTCGTTCGTAAAATAAA 476
consensus_8557#3 ------------------------------------------------------------
consensus_8557#1 CTTCCGTAACATTTTTATTCACGTTTCGAATTATATCATTTCCAAACAATACGTTGCTAC 474
consensus_8557#2 -------GCAGAATNGCCCGAGGTTAGAAAAAGAATCATTGCCAGTGACTCTG---CTAA 50
consensus_8557#0 ACATATGCATTTGAGGTGACTAAATTA---CGCTCGAACGCCTCTG-TGACATAGTTATC 532
consensus_8557#3 ------------GGTGAGCTAGAGTTA---CGCTCGA-CGCCTCTGGTGACATAGTTATC 44
consensus_8557#1 GCTTAGGGATTCGATTGAATTGATTTTTTTCGCTTGA-TACATCAT-CACAAGGATTTTC 532
consensus_8557#2 ATCTACATGTTTCGGCAACAATACGTATAAAGCCGCAAAGCAATAT-CAGGAAAGATGCC 109
* * ** * * * * *
consensus_8557#0 ATTGAA--CTCATT-CCATTGT-TGAGTTTGTGGGTGTTTGCAAACAGCTACGTAATGCC 588
consensus_8557#3 ATTGAAGCCTCATNTCCATTGT-TGAGTTTGTGGGTGTTTGCAA-CAGCTACGTAATGCC 102
consensus_8557#1 AGTGGC-CCATGTTAAGATGGTATTAGTTTCGATGTTTTATCAGAAGCTGACACATTTCT 591
consensus_8557#2 AATGCC--AATGCGAATAGTATCATGGAACAAAAATGTGAACAA---GTGAAAAGAAATG 164
* ** * * * * * ** *
consensus_8557#0 CACCAGCAGTAGATCCC--ATATGATTCGAAA-TTCCA-TACA-GTGAATAGTATATTGG 643
consensus_8557#3 CACCAGCAGTAGATNGCCAGGGTGATTCGNGAGTNCCACTNCACGTGAATAGTATATTGG 162
consensus_8557#1 TTTCACTTGTTCACATT---TTTGTTCCATGA-TACTATTAGCATTGGCATTGGCATCTT 647
consensus_8557#2 TGTCAGCTTCTGACTAA----AACATTCGAAA-AACTAATAAC--TGGCA---ACATTCA 214
** * * * * * * * ** **
consensus_8557#0 TCCCGAAATGTCTTCTGAGGCATAAGGTTGCAGATTA-AGAGCTCGATTTTTGGTAGGA- 701
consensus_8557#3 TCCCGAAATGTCTTCTGAGGCATAAGGTTGCAGATTA-AGAGCTCGATTTTTGGTAGGAT 221
consensus_8557#1 TCCTGATAT-TGCTTTGCGGCTTTA---TACGTATTG-TTGCCGAAACATGTAGATTTGC 702
consensus_8557#2 CACTGACACGGCCC----AGTTAAGGAGGACAGATAAGAGGCCTTGGAACAAAAAAGCAT 270
* ** * * * ** *
consensus_8557#0 -AACTCAAC---AATATTGGTCAATTTGCTCCAACGTGCTTCCGA-AAATC------TTT 750
consensus_8557#3 AAGCTCGGACCAGATATTGGTCAATTTGCTCCAACGTGCTTCCGA-AAAGTGCGNGGNGN 280
consensus_8557#1 AGAGTCACTGGCAATGATTTCTTTTTCTTTGTATCCTTCTCTCATTAAATCATCAGTCGT 762
consensus_8557#2 TGACACAACCAANGCAACAAAGAACTTGCCGAAAGATTGATCAGGCCCAAC-TCAAACCT 329
* * * * *
consensus_8557#0 TAAGA-TGTA-TTACTAAAT-ACCGTGGAAAACGTTCGATCGTCAAT---CTTTTAGTGC 804
consensus_8557#3 TAAGAGTGTAGTTACTNAATGACCGTGGAAA-CGTTCGATCGTCAATGCGTTGTTAGTGC 339
consensus_8557#1 TACAGTTGCAGTCACTA-----TCGCAGAGGACGACTGTATGCAAGAATCAATTGAATCT 817
consensus_8557#2 TACAACCCCAGAAATTAA---ACTTTGGAAA-----CAAAACTAAAC--------AAACC 373
** * * * ** * *
consensus_8557#0 ATT----TTCGACGTGTATCGCAA-TTCGAACAC-GTAGGTTGATCT--ATTCCA--TCC 854
consensus_8557#3 ATNGGTGTGCGACGTGTATCGCAAATTCGAACAC-GTAGGTTGATCGTAGTTCCAAGTCC 398
consensus_8557#1 TTTGCATCACAGTGTTTATCGATTGATTGACTATTGTAACTTGAATTCGATGAACTCTCT 877
consensus_8557#2 ATTCGGGCAAAAAACAAACCGAAANCGCGGGAAGCATTGATACAAATTATTCCCGACACT 433
* * ** * * * * * * *
consensus_8557#0 ATAATCTCCT-----CCTTGATA-AACATTT---CGAGACAGTTT---TCCAGCTTGC-- 900
consensus_8557#3 ATAATCGTCCGTC--CTTTGATAGAACAGTTTG-CGAGACAAGTTGTTCCAAGCTTGC-- 453
consensus_8557#1 AAAGAAGACTGTGCACGTAGATTGACCGTTTCCTTGCTTCTGCTGTTGTGAAGCTTTTCT 937
consensus_8557#2 AAAAATTCGCCAATCATCCTGCTAACNACCTTTATTAACCAAGANCC-CCAAGCGTTN-- 490
* * * * * *** *
consensus_8557#0 -------AACGGGAACTTGATGATGGTAGAGGTAGACTTA--AATCCCAAAATGG---AT 948
consensus_8557#3 -------AACGGGAACTTGATGATGGTAGAGGTAGACTTA--AAGTCCACAATGG---AT 501
consensus_8557#1 TCTGATAAATCAGTACTCGATGTTTCTAATGATGAGCTTGCGGAATTCGCTTTGGGAAAC 997
consensus_8557#2 ---------TTACAACTT--TCATTGNACACAGNGGATTGCTACCAGGCACACGG---TT 536
*** * * * ** **
consensus_8557#0 CAAACATAGTACTTTCCATATTGCAAAACGTACACTTGAGCGTACTTC-TTAACTGCCCG 1007
consensus_8557#3 CAAACATAGTACTTTCCATATTGCAAAACGTACACTTGAGCGTACTTCGTTAACTGCCCG 561
consensus_8557#1 CTTCCAGAATATGCTAAACTCAACTGAGT-TATACGTGATGAAACACTAGCAGCAGGTTT 1056
consensus_8557#2 CCAAAGTGGCACTTTCCTCCTTAACGGCGAAGCACCAAAGAGGCAA-----AGCGTATCA 591
* * * ** * * *
consensus_8557#0 ACAA-ACAGATCC-TTTATCATTGAATTTTCTGC-CTTAGAATACCATTCCCACA-GCAT 1063
consensus_8557#3 ACANGACAGATCCGTTTATCATTGAATTTTCTGCACTTAGAATACCATTCCCACA-GCAT 620
consensus_8557#1 ATACGTCGAAAGACTGTATCGTTGATAGATTTCAGCTCCACATAACGCTGTGTTACGTAT 1116
consensus_8557#2 CTAATGCTNGGG--TTCCTAATTGGCGACTACTA-CTGGGGTAAACATTACCNTTGGGCT 648
* * * * *** * ** * * * * *
consensus_8557#0 ATCTGC--TTTATCC-TTGTTGTT-CATG---TTATC-GTCAA-TTTCA-GACAAGGGAT 1113
consensus_8557#3 ATCTGCA-TTTATCCATTGTTGTTACATG---TTATCAGTCAAATTTCA-GACAAGGGAT 675
consensus_8557#1 ATTCGAAACGTAGCTACTGTTATTTCTCAGGCTTGTCGTTGAACTGTTGCGATAAAGACT 1176
consensus_8557#2 GTACCAA-CTTNGNCAAAACCATTCCAACAA-TTGGC-ATCTTCTCCAACAANTTGGGCC 705
* * ** * ** * * * * *
consensus_8557#0 CC-CGCTTGATAGCAGC--ATTCAAAGCACCATGTAAAGAATCTAAGAAAAACC-----T 1165
consensus_8557#3 CCACGCTTGATAGCAGC--ATTCAAAGCACCATGTAAAGAATCTAAGAAAAACC-----T 728
consensus_8557#1 ACTGTTTCGAAAACTGCT-AGTCTTAGTACTGTTCACGGGCGGTGAGTAGTATACACGAT 1235
consensus_8557#2 CCTCCCAAAGGATTACCCAAACNAAAACCCCACCTGGAAACGCTAATACACACCACTTAT 765
* * * * * * * * * *
consensus_8557#0 TAAAAACTCTTGGGCATC-TTGTTGGGCTGATCCTGAATACATTCGGTGTTTGCTAGAGA 1224
consensus_8557#3 TAAAAACTCTTGGGCATCATTGTTGGGCTGATCCTGAATACATTCGGTGTTTGCTAGAGA 788
consensus_8557#1 CGGAGAAACTTGATTTTGAGAATTGGCTTGCAGGTGGTTGAATGTATCGACTACCACTAG 1295
consensus_8557#2 TTAACACCCACATATCCC-CAATATATCAGTACCTTAACACCGGGAACAGTAGCTTACCA 824
* * * * * * *
consensus_8557#0 AAGCGTATTTTAAGTCGGATGGATTAATGCTCCGTTGTGTTCCAC-TCCACATATTTTTG 1283
consensus_8557#3 AAGCGTATTTTAAGTCGGATGGAT-AATGCTCCGTT------------------------ 823
consensus_8557#1 ACGAGTACGTTGATGTGACTGGC---ATATTCCACCTTCTTTTACGTTAATCTGCTTTTC 1352
consensus_8557#2 CAAAAACTNACCAATTTACCAATT--ATACCTTGCAAACAAACAAANCGACANGGGTGTC 882
* **
consensus_8557#0 ATAAGCTTTGTGTATTC-TGCTAATATAAGATGATCTTTACTAGTACCTCTTTCAGATGA 1342
consensus_8557#3 ------------------------------------------------------------
consensus_8557#1 ATAAGATGAAT-TAGTG-TGCTATAATCGAACGCTCTAAAC-ACTGCGTGGTACGATTTC 1409
consensus_8557#2 ACACTTCAAGAGGNTTAACATCACAACGGCAATTTCCAAATTACCCCTTACTACACATTT 942
consensus_8557#0 TGATTGACCTCGTA-GAAATGATGTAAGTTCTCGGGTGTGACTGAGGCAT-TGAATCATT 1400
consensus_8557#3 ------------------------------------------------------------
consensus_8557#1 ACACTCACACGATC-ACACTCACAAACGAATTCGAC----ATTAACACTT-CATGCCGG- 1462
consensus_8557#2 AANTTATTATCACACGACCCCACGNCTAAACTTAACCACAACCAACAAACATGGANC--- 999
consensus_8557#0 GAGTTCATGAAGCAAGTATTACCAATATTCCATAGACCACATAAACCTGTTATTATGCCA 1460
consensus_8557#3 ------------------------------------------------------------
consensus_8557#1 ------------------------------------------------------------
consensus_8557#2 ------------------------------------------------------------
consensus_8557#0 CATAACCGAAGCATGCCTGCGCGAAACAACGTCGATGAGGAAATTGCTTATGATTTGCTT 1520
consensus_8557#3 ------------------------------------------------------------
consensus_8557#1 ------------------------------------------------------------
consensus_8557#2 ------------------------------------------------------------
consensus_8557#0 TAAACAATTCCATAATTTCATTATTAAAATAATAATTACTAATTGTTGTATTCATAGACT 1580
consensus_8557#3 ------------------------------------------------------------
consensus_8557#1 ------------------------------------------------------------
consensus_8557#2 ------------------------------------------------------------
consensus_8557#0 TAATTGTATGGTTTTATATAAGTTTGAGCACGAATTAGCTGATATTATTACTTTCTTTAT 1640
consensus_8557#3 ------------------------------------------------------------
consensus_8557#1 ------------------------------------------------------------
consensus_8557#2 ------------------------------------------------------------
consensus_8557#0 AATCAAATATGCGTTGATTCAATTATATTTAGAAGTATACCGG 1683
consensus_8557#3 -------------------------------------------
consensus_8557#1 -------------------------------------------
consensus_8557#2 -------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||