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Anopheles gambiae
cluster # 8573 cluster # 8573       Sequences # 11       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8573#0 length = 1504 sequences # 8  
consensus_8573#1 length = 671 sequences # 1  
consensus_8573#2 length = 616 sequences # 1  
consensus_8573#3 length = 489 sequences # 1  

consensusID : consensus_8573#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1504
fasta sequence
                              [GATGTGTCATTAATGTAAAAGCGAATGTACCTCTCTGCGTATTAAAGGAAGGGAGCTCAACATGCAATATTTCAATAGTTTATTTCAATTACCCGCGAGCAAATCCAAATTAATTCCTTCTCTGCGGTTATCTAAATGAGACTTTATGATGGCGATGTATTGAGGGCGATTAACCATGGAATATCCGGTAAAAAAAAGAGGCTTCATGACCTCATGTAGACTTTTCACACCAGAGCAGAAGAAGTCCAACGCAAGTTCAAGGACCGTTCCGAAATCACACTCGTCTGTTGCCAAATCTGCAGCGGTTATTATGGGCTGTAATTCTCTCATGAGTTCTTGGTATTCGAGGTTATTTTCAAAACGATTCAGATTTTCGAATTTGGAAAGAATGGCTCGAATTTTTGCATCACTTTCTAGCAGAGGTCTATATCCTATGTTGGTCTTCCTATCGTAAGGAACCACCAGACCAACCTTGTGGAAAGTTTTGCTAACTATCTGTGCCTTGCGAGACTTTTGTTTCTCGCAGCAATTTAAAGCAATGTCTTTCGACTGAG-CCCAATCGCTGATAAGTTTTTTCATATCGGATATTTTTTTTTTGTTGAATGGCGTCACAGATGCATAGTTTCCCAAGAAATGCAATATTGCATCAAAAATGTTTTCACCAACAATTAGAAACTCGCAGCCTTTTTTAACATCGTTCCAGGCCACTAAACCATCCGTGTTATCTGGACTATCTCTCCAATAGCCGTAATGCACACCAGAGTTTTGTTGCACGATTATCGTCTGAAATTCAGGTGGATCATAG-AAAAAACGCCAATGGCGCAAATAATCTCCAGGTTCGTGAACTTTCGCGCGGTCAAACTTTCCTGCGAGAACGTCGTATGGCCCAACCAATTTAAGTCCGAACTGCAAAAATGTTTCTTCCGGTTTTATCTGGGTTTTCAATGCTTGTACTTGGCAAAACTGCCACAGATCTTCGAAGCACGGTGGCATTAGGACAAGAAATTTGTGTTTGATGAATTTTTTAGGTTCATTGCACAATTCCTTGTATTCAGCTTGTTGGGAAAATTCAATTTGAGAATCATAGATATCGCGCAAAATACCAACGCTCATAGGCACCTTTGGCACAGCATAACGCTGGCGAGTTAAATCATGATATTCGTAGCTAGAGTCTTTCCCACCTGAATAGCAAATATCTTTTTCTGGAGATGAGAGACGTTTATAACGTTTGATATCTTCCAGCTGTTGATTAAGGGTTTCCATTGAACGTTTCTTGATTTCCATGTTACCAGAGTTAGACGTAACCGCTTGTACTGTACTGTTTTCGGCTACTGATTTCACAGGATGAGCAAACTTTTCTTTATGCGCAGGATTCTGCTGATAACATTCAGCGCCATATTTGCAATCGGGTTTGTTCATCTGTACTGTG-ATCTTCGCTTACTTTAACCCGTACGAATGAATTTGATGATATTTTTTGGCGTTTATATGCGACTTCTGGTAGTTG]

[-] EMBL BM656672             [GATGTGTCATTAATGTAAAAGCGAATGTACCTCTCTGCGTATTAAAGGAAGGGAGCTCAACATGCAATATTTCAATAGTTTATTTCAATTACCCGCGAGCAAATTCAAATTAATTCCTTCTCTGCGGTTATCTAAATGAGACTTTATGATGGCGATGTATTGAGGGCGATTAACCATGGAATATCCGGTAAAAAAAAGAGGCTTCATGACCTCATGTAGACTTTTCACACCAGAGCAGAAGAAGTCCAACGCAAGTTCAAGGACCGTTCCGAAATCACACTCGTCTGTTGCCAAATCTGCAGCGGTTATTATGGGCTGTAATTCTCTCATGAGTTCTTGGTATTCGAGGTTATTTTCAAAACGATTCAGATTTTCGAATTTGGAAAGAATGGCTCGAATTTTTGCATCACTTTCTAGCAGAGGTCTATATCCTATGTTGGTCTTCCTATCGTAAGGAACCACCAGACCAACCTTGTGGAAAGTTTTGCTAACTATCTGTGCCTTGCGAGACTTTTGTTTCTCGCAGCAATTTAAAGCAATGTCTTTCGACTGAG CCCAATCGCTGATAAGTTTTTTCATATCGGATATTTTTTTTTTGTTGAATGGCGTCACAGATGCATAGTTTCCCAAGAAATGCAATATTGCATCAAAAATGTTTTCACCAACAATTAGAAACTCGCAGCCTTTTTTAACATCGTTCCAGGCCACTAAACCATCCGTGTTATCTGGACTATCTCcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS08EX1             [                                                                          ATAGTTTATTTCAATTACCCGCGAGCAAATCCAAATTAATTCCTTCTCTGCGGTTATCTAAATGAGACTTTATGATGGCGATGTATTGAGGGCGATTAACCATGGAATATCCGGTAAAAAAAAGAGGCTTCATGACCTCATGTAGACTTTTCACACCAGAGCAGAAGAAGTCCAACGCAAGTTCAAGGACCGTTCCGAAATCACACTCGTCTGTTGCCAAATCTGAAGCGGTTATTATGGGCTGTAATTCTCTCATGAGTTCTTGGTATTCGAGGTTATTTTCAAAACGATTCAGATTTTCGAATTTGGAAAGAATGGCTCGAATTTTTGCATCACTTTCTAGCAGAGGTCTATATCCTATGTTGGTCTTCCTATCGTAAGGAACCACCAGACCAACCTTGTGGAAAGTTTTGCTAACTATCTGTGCCTTGCGAGACTTTTGTTTCTCGCAGCAATTTAAAGCAATGTCTTTCGACTGAG CCCAATCGCTGATAAGTTTTTTCATATCGGATA TATTTTTTTGTTGAATGGCGTCACAGATGCATAGTTTCCCAAGAAATGCAATATTGCATCAAAAATGTTTTCACCAACAATTAGAAACTCGCAGCCTTTTTTAACATCGTTCCAGGCCACTAAACCATCCGTGTTATCTGGACTATCTCTCCAATAGCCGTAATGCACACCAGAGTTTTGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08ETN             [                                                                                     CAATTACCCGCGAGCAAATCCAAATTAATTCCTTCTCTGCGGTTATCTAAATGAGACTTTATGATGGCGATGTATTGAGGGCGATTAACCATGGAATATCCGGTAAAAAAAAGAGGCTTCATGACCTCATGTAGACTTTTCACACCAGAGCAGAAGAAGTCCAACGCAAGTTCAAGGACCGTTCCGAAATCACACTCGTCTGTTGCCAAATCTGAAGCGGTTATTATGGGCTGTAATTCTCTCATGAGTTCTTGGTATTCGAGGTTATTTTCAAAACGATTCAGATTTTCGAATTTGGAAAGAATGGCTCGAATTTTTGCATCACTTTCTAGCAGAGGTCTATATCCTATGTTGGTCTTCCTATCGTAAGGAACCACCAGACCAACCTTGTGGAAAGTTTTGCTAACTATCTGTGCCTTGCGAGACTTTTGTTTCTCGCAGCAATTTAAAGCAATGTCTTTCGACTGAT CCCAATCGCTGATAAGTTTTTTCATATCGGATA TTTTTTTTTGTTGAATGTTTTCACAGATGCATAGTTTCCCAAGAAATGCAATATTGCATCAAAAATGTTTTCACCAACAATTAGAAACTCGCAGCCTTTTTTAACATCGTTCCAGGCCACTAAACCATCCGTGTTATCTGGACTATCTCTCCAATAGCCGTAATGCACACCAGAGTTTTGTTGCACGATTATCGTCTGAAATTCAGGTGGATCATAG AAAAAACGCCAATGGCGCAAATAATCTCCAGGTTCGTGAACTTTCGCGCGGTCAAACTTTCCTGCGAGAACGTCGTATGGCCCAACCAATTTAAGTCCGAGCTGCAAAAATGTTTCTTCCGGTTTTATCTGGGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL BX609431             [                                                                                                                                                                                                                                                                                            CTGTTGCCAAATCTGCAGCGGTTATTATGGGCTGTAATTCTCTCATGAGTTCTTGGTATTCGAGGTTATTTTCAAAACGATTCAGATTTTCGAATTTGGAAAGAATGGCTCGAATTTTTTCATCACTTTCTAGCAGAGGTCTATATCCTATGTTGGTCTTCCTATCGTAAGGAACCACCAGACCAACCTTGTGGAAAGTTTTGCTAACTATCTGTGCCTTGCGAGACTTTTGTTTCTCGCAGCAATTTAAAGCAATGTCTTTCGACTGAG CCCAATCGCTGATAAGTTTTTTCATATCGGATATTTTTTTTTTGTTGAATGGCGTCACAGATGCATAGTTTCCCAAGAAATGCAATATTGCATCAAAAATGTTTTCACCAACAATTAGAAACTCGCAGCCTTTTTTAACATCGTTCCAGGCCACTAAACCATCCGTGTTATCTGGACTATCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL BX622503             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGCTAACTATCTGTGCCTNGCGAGACTTTTGTTTCTCGCAGCAATTTAAAGCAATGTCTTTCGACTGAGACCAAATCGCTGATAAGTTTTTTCATATCGGATATTTTTTTTTTGTTGAATGGCGTCACAGATGCATAGTTTCCCAAGAAATGCAATATTGCATCAAAAATGTTTTCACCAACAATTAGAAACTCGCAGCCTTTTTTAACATCGTTCCAGGCCACTAAACCATCCGTGTTATCTGGACTATCTCTCCAATAGCCGTAATGTACACCAGAGTTTTGTTGCACGATTATCGTCTGAAATTCAGGTGGATCATAG AAAAAACGCCAATGGCGCAAATAATCTCCAGGTTCGTGAACTTTCGCGCGGTCAAACTTTCCTGCGAGAACGTCGTATGGCCCAACCAATTTAAGTCCGAACTGCAAAAATGTTTCTTCCGGTTTTATCTGGGTTTTCAATGCTTGTACTTGGCAAAACTGCCACAGATCTTCGAAGCACGGTGGCATTAGGACAAGAAATTTGTGTTTGATGAATTTTTTAGGTTCATTGCACAATTCCTTGTATTCAGCTTGTTGGGAAAATTCAATTTGAGAATCATAGATATCGCGCAAAATACCAACGCTCATAGGCACCTTTGGCACAGCATAACGCTGGCGAGTT                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CNS08EX0             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CACACCAGAGTTTTTTTGCACGATTATCGTCTGAAATTCAGGTGGATCATAGAAAAAAACGCCAATGGCGCAAATAATCTCCAGGTTCGTGAACTTTCGCGCGGTCAAACTTTCCTGCGAGAACGTCGTATGGCCCAACCAATTTAAGTCCGAACTGCAAAAATGTTTCTTCCGGTTTTATCTGGGTTTTCAATGCTTGTACTTGGCAAAACTGCCACAGATCTTCGAAGCACGGTGGCATTAGGACAAGAAATTTGTGTTTGATGAATTTTTTAGGTTCATTGCACAATTCCTTGTATTCAGCTTGTTGGGAAAATTCAATTTGAGAATCATAGATATCGCGCAAAATACCAACGCTCATAGGCACCTTTGGCACAGCATAACGCTGGCGAGTTAAATCATGATATTCGTAGCTAGAGTCTTTCCCACCTGAATAGCAAATATCTTTTTCTGGAGATGAGAGACGTTTATAACGTTTGATATCTTCCAGCTGTTGATTAAGGGTTTCCATTGAACGTTTCTTGATTTCCATGTTACCAGAGTTAGACGTAACCGCTTGTACTGTACTGTTTTCGGCTACTGATTTCACAGGATGAGCAAACTTTTCTTTATGCGCAGGATTCTGCTGATAACATTCAGCGCCATATTTGCAATCGGGTTTGTTCATCTGTACTGTG ATCTTCGCTTACTTTAACCCGTACGAATGAATTTGATGATATTTTTTGGCGTTTATATGCGACTTCTGGTAGTTG]
[-] EMBL BM603995             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGTTTTGTTGCACGATTATCGTCTGAAATTCAGGTGGATCATAG AAAAAACGCCAATGGCGCAAATAATCTCCAGGTTCGTGAACTTTCGCGCGGTCAAACTTTCCTGCGAGAACGTCGTATGGCCCAACCAATTTAAGTCCGAACTGCAAAAATGTTTCTTCCGGTTTTATCTGGGTTTTCAATGCTTGTACTTGGCAAAACTGCCACAGATCTTCGAAGCACGGTGGCATTAGGACAAGAAATTTGTGTTTGATGAATTTTTTAGGTTCATTGCACAATTCCTTGTATTCAGCTTGTTGGGAAAATTCAATTTGAGAATCATAGATATCGCGCAAAATACCAACGCTCATAGGCACCTTTGGCACAGCATAACGCTGGCGAGTTAAATCATGATATTCGTAGCTAGAGTCTTTCCCACCTGAATAGCAAATATCTTTTTCTGGAGATGAGAGACGTTTATAACGTTTGATATCTTCCAGCTGTTGATTAAGGGTTTCCATTGAACGTTTCTTGATTTCCATGTTACCAGAGTTAGACGTAACCGCTTGTACTGTACTGcgg                                                                                                                                                                                     ]
[-] EMBL CNS08ETM             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATCGTCTGAAATTCAGGTGGATCATAG AAAAAACGCCAATGGCGCAAATAATCTCCAGGTTCGTGAACTTTCGCGCGGTCAAACTTTCCTGCGAGAACGTCGTATGGCCCAACCAATTTAAGTCCGAGCTGCAAAAATGTTTCTTCCGGTTTTATCTGGGTTTTCAATGCTTGTACTTGGCAAAACTGCCACAGATCTTCGAAGCACGGTGGCATAAAGACAAGAAATTTGTGTTTGATGAATTTTTTAGGTTCATTGCACAATTCCTAGTATTCAGCTTGTTGGGAAAATTCAATTTGAGAATCATAGATATCGCGCAAAATACCAACGCTCATAGGCACCTTTGGCACAGCATAACGCTGGCGAGTTAAATCATGATATTCGTAGCTAGAGTCTTTCCCACCTGAATAGCAAATATCTTTTTCTGGAGATGAGAGACGTTTATAACGTTTGATATCTTCCAGCTGTTGATTAAGGGTTTCCATTGAACGTTTCTTGATTTCCATGTTACCAGAGTTAGACGTAACCGCTTGTACTGTACTGTTTTCGGCTACTGATTTCACAGGATGAGCAAACTTTTCTTTATGCGCAGGATTCTGCTGATAACATTCAGCGCCATATTTGCAATCGGGTTTGTTCATCTGTACTGTGAATCTTCGCTTACTTTAACCCGTACGAATGAA                                            ]


>consensus_8573#0 GATGTGTCATTAATGTAAAAGCGAATGTACCTCTCTGCGTATTAAAGGAAGGGAGCTCAA CATGCAATATTTCAATAGTTTATTTCAATTACCCGCGAGCAAATCCAAATTAATTCCTTC TCTGCGGTTATCTAAATGAGACTTTATGATGGCGATGTATTGAGGGCGATTAACCATGGA ATATCCGGTAAAAAAAAGAGGCTTCATGACCTCATGTAGACTTTTCACACCAGAGCAGAA GAAGTCCAACGCAAGTTCAAGGACCGTTCCGAAATCACACTCGTCTGTTGCCAAATCTGC AGCGGTTATTATGGGCTGTAATTCTCTCATGAGTTCTTGGTATTCGAGGTTATTTTCAAA ACGATTCAGATTTTCGAATTTGGAAAGAATGGCTCGAATTTTTGCATCACTTTCTAGCAG AGGTCTATATCCTATGTTGGTCTTCCTATCGTAAGGAACCACCAGACCAACCTTGTGGAA AGTTTTGCTAACTATCTGTGCCTTGCGAGACTTTTGTTTCTCGCAGCAATTTAAAGCAAT GTCTTTCGACTGAGCCCAATCGCTGATAAGTTTTTTCATATCGGATATTTTTTTTTTGTT GAATGGCGTCACAGATGCATAGTTTCCCAAGAAATGCAATATTGCATCAAAAATGTTTTC ACCAACAATTAGAAACTCGCAGCCTTTTTTAACATCGTTCCAGGCCACTAAACCATCCGT GTTATCTGGACTATCTCTCCAATAGCCGTAATGCACACCAGAGTTTTGTTGCACGATTAT CGTCTGAAATTCAGGTGGATCATAGAAAAAACGCCAATGGCGCAAATAATCTCCAGGTTC GTGAACTTTCGCGCGGTCAAACTTTCCTGCGAGAACGTCGTATGGCCCAACCAATTTAAG TCCGAACTGCAAAAATGTTTCTTCCGGTTTTATCTGGGTTTTCAATGCTTGTACTTGGCA AAACTGCCACAGATCTTCGAAGCACGGTGGCATTAGGACAAGAAATTTGTGTTTGATGAA TTTTTTAGGTTCATTGCACAATTCCTTGTATTCAGCTTGTTGGGAAAATTCAATTTGAGA ATCATAGATATCGCGCAAAATACCAACGCTCATAGGCACCTTTGGCACAGCATAACGCTG GCGAGTTAAATCATGATATTCGTAGCTAGAGTCTTTCCCACCTGAATAGCAAATATCTTT TTCTGGAGATGAGAGACGTTTATAACGTTTGATATCTTCCAGCTGTTGATTAAGGGTTTC CATTGAACGTTTCTTGATTTCCATGTTACCAGAGTTAGACGTAACCGCTTGTACTGTACT GTTTTCGGCTACTGATTTCACAGGATGAGCAAACTTTTCTTTATGCGCAGGATTCTGCTG ATAACATTCAGCGCCATATTTGCAATCGGGTTTGTTCATCTGTACTGTGATCTTCGCTTA CTTTAACCCGTACGAATGAATTTGATGATATTTTTTGGCGTTTATATGCGACTTCTGGTA GTTG



consensusID : consensus_8573#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 671
fasta sequence
                              [CATAGTTTCCCAAGAAATGCAATATTGCATCAAAAATGTTTTCACCAACAATTAGAAACTCGCAGCCTTTTTTAACATCGTTCCAGGCCACTAAACCATCCGTGTTATCTGGACTATCTCTCCAATAGCCGTAATGTACACCAGAGTTTTGTTGCACGATTATCGTCTGAAATTCAGGTGGATCATAGAAAAAACGCCAATGGCGCAAATAATCTCCAGGTTCGTGAACTTTCGCGCGGTCAAACTTTCCTGCGAGAACGTCGTATGGCCCAACCAATTTAAGTCCGAAAACAAAAATGTTTCTTCCGGTTTTATCTGGGTTTTCAATGCTTGTACTTGGCAAAACTGCCACAGATCTTCGAAGCACGGTGGCATTAGGACAAGAAATTTGTGTTTGATGAATTTTTTAGGTTCATTGCACAATTCCTTGTATTCAGCTTTGGCACAGCATAACGCTGGCGAGTTAAATCATGATATTCGTAGCTAGAGTCTTTCCCACCTGAATAGCAAATATCTTTTTCTGGAGATGAGAGACGTTTATAACGTTTGATATCTTCCAGCTGTTGATTAAGGGTTTCCATTGAACGTTTCTTGATTTCCATGTTACCAGAGTTAGACGTAACCGCTTGTACTGTAATGTTTTCGGCTACTGATTTCAACAGGATGAGCAA]

[-] EMBL CNS08T7J             [CATAGTTTCCCAAGAAATGCAATATTGCATCAAAAATGTTTTCACCAACAATTAGAAACTCGCAGCCTTTTTTAACATCGTTCCAGGCCACTAAACCATCCGTGTTATCTGGACTATCTCTCCAATAGCCGTAATGTACACCAGAGTTTTGTTGCACGATTATCGTCTGAAATTCAGGTGGATCATAGAAAAAACGCCAATGGCGCAAATAATCTCCAGGTTCGTGAACTTTCGCGCGGTCAAACTTTCCTGCGAGAACGTCGTATGGCCCAACCAATTTAAGTCCGAAAACAAAAATGTTTCTTCCGGTTTTATCTGGGTTTTCAATGCTTGTACTTGGCAAAACTGCCACAGATCTTCGAAGCACGGTGGCATTAGGACAAGAAATTTGTGTTTGATGAATTTTTTAGGTTCATTGCACAATTCCTTGTATTCAGCTTTGGCACAGCATAACGCTGGCGAGTTAAATCATGATATTCGTAGCTAGAGTCTTTCCCACCTGAATAGCAAATATCTTTTTCTGGAGATGAGAGACGTTTATAACGTTTGATATCTTCCAGCTGTTGATTAAGGGTTTCCATTGAACGTTTCTTGATTTCCATGTTACCAGAGTTAGACGTAACCGCTTGTACTGTAATGTTTTCGGCTACTGATTTCAACAGGATGAGCAA]


>consensus_8573#1 CATAGTTTCCCAAGAAATGCAATATTGCATCAAAAATGTTTTCACCAACAATTAGAAACT CGCAGCCTTTTTTAACATCGTTCCAGGCCACTAAACCATCCGTGTTATCTGGACTATCTC TCCAATAGCCGTAATGTACACCAGAGTTTTGTTGCACGATTATCGTCTGAAATTCAGGTG GATCATAGAAAAAACGCCAATGGCGCAAATAATCTCCAGGTTCGTGAACTTTCGCGCGGT CAAACTTTCCTGCGAGAACGTCGTATGGCCCAACCAATTTAAGTCCGAAAACAAAAATGT TTCTTCCGGTTTTATCTGGGTTTTCAATGCTTGTACTTGGCAAAACTGCCACAGATCTTC GAAGCACGGTGGCATTAGGACAAGAAATTTGTGTTTGATGAATTTTTTAGGTTCATTGCA CAATTCCTTGTATTCAGCTTTGGCACAGCATAACGCTGGCGAGTTAAATCATGATATTCG TAGCTAGAGTCTTTCCCACCTGAATAGCAAATATCTTTTTCTGGAGATGAGAGACGTTTA TAACGTTTGATATCTTCCAGCTGTTGATTAAGGGTTTCCATTGAACGTTTCTTGATTTCC ATGTTACCAGAGTTAGACGTAACCGCTTGTACTGTAATGTTTTCGGCTACTGATTTCAAC AGGATGAGCAA



consensusID : consensus_8573#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 616
fasta sequence
                              [CCTTGCGAGACTTTTGTTTCTCGCAGCAATTTAAAGCAATGTCTTTCGACTGAGCCCAATCGCTGATAAGTTTTTTCATATCGGATATTTTTTTTTGTTGAATGGCGTCACAGATGCATAGTTTCCCAAGAAATGCAATATTGCATCAAAAATGTTTTCACCAACAATTAGAAACTCGCAGCCTTTTTTAACATCGTTCCAGGCCACTAAACCATCCGTGTTATCTGGACTATCTCTCCAATAGCCGTAATGCACACCAGAGTTTTGTTGCACGATTATCGTCTGAAATTCAGGTGGATCATAGAAAAAACGCCAATGGCGCAAATAATCTCCAGGTTCGTGAACTTTCGCGCGGTCAAACTTTCCTGCGAGAACGTCGTATGGCCCAACCAATTTAAGTCCGAACTGAATAGCAAATATCTTTTTCTGGAGATGAGAGACGTTTATAACGTTTGATATCTTCCAGCTGTTGATTAAGGGTTTCCATTGAACGTTTCTTGATTTCCATGTTACCAGAGTTAGACGTAACCGCTTGTACTGTACTGTTTTCGGCTACTGATTTCACAGGATGAGCAAACTTTTCTTTATGCGCAGGATTCTGCTGATAACATTCCGG]

[-] EMBL BM636171             [CCTTGCGAGACTTTTGTTTCTCGCAGCAATTTAAAGCAATGTCTTTCGACTGAGCCCAATCGCTGATAAGTTTTTTCATATCGGATATTTTTTTTTGTTGAATGGCGTCACAGATGCATAGTTTCCCAAGAAATGCAATATTGCATCAAAAATGTTTTCACCAACAATTAGAAACTCGCAGCCTTTTTTAACATCGTTCCAGGCCACTAAACCATCCGTGTTATCTGGACTATCTCTCCAATAGCCGTAATGCACACCAGAGTTTTGTTGCACGATTATCGTCTGAAATTCAGGTGGATCATAGAAAAAACGCCAATGGCGCAAATAATCTCCAGGTTCGTGAACTTTCGCGCGGTCAAACTTTCCTGCGAGAACGTCGTATGGCCCAACCAATTTAAGTCCGAACTGAATAGCAAATATCTTTTTCTGGAGATGAGAGACGTTTATAACGTTTGATATCTTCCAGCTGTTGATTAAGGGTTTCCATTGAACGTTTCTTGATTTCCATGTTACCAGAGTTAGACGTAACCGCTTGTACTGTACTGTTTTCGGCTACTGATTTCACAGGATGAGCAAACTTTTCTTTATGCGCAGGATTCTGCTGATAACATTCCGG]


>consensus_8573#2 CCTTGCGAGACTTTTGTTTCTCGCAGCAATTTAAAGCAATGTCTTTCGACTGAGCCCAAT CGCTGATAAGTTTTTTCATATCGGATATTTTTTTTTGTTGAATGGCGTCACAGATGCATA GTTTCCCAAGAAATGCAATATTGCATCAAAAATGTTTTCACCAACAATTAGAAACTCGCA GCCTTTTTTAACATCGTTCCAGGCCACTAAACCATCCGTGTTATCTGGACTATCTCTCCA ATAGCCGTAATGCACACCAGAGTTTTGTTGCACGATTATCGTCTGAAATTCAGGTGGATC ATAGAAAAAACGCCAATGGCGCAAATAATCTCCAGGTTCGTGAACTTTCGCGCGGTCAAA CTTTCCTGCGAGAACGTCGTATGGCCCAACCAATTTAAGTCCGAACTGAATAGCAAATAT CTTTTTCTGGAGATGAGAGACGTTTATAACGTTTGATATCTTCCAGCTGTTGATTAAGGG TTTCCATTGAACGTTTCTTGATTTCCATGTTACCAGAGTTAGACGTAACCGCTTGTACTG TACTGTTTTCGGCTACTGATTTCACAGGATGAGCAAACTTTTCTTTATGCGCAGGATTCT GCTGATAACATTCCGG



consensusID : consensus_8573#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 489
fasta sequence
                              [CGTCGTATGGCCCAACCAATTTAAGTCCGAACTGCAAAAATGTTTCTTCCGGTTTTATCTGGGTTTTCAANTGCTTGTACTTGGCAAAACTGCCACAGATCTTCGAAGCACGGTGGCATTAGGACAAGAAATTTGTGTTTGATGAATTTTTTAGGTTCATTGCACAATTCCTTGTATTCAGCTTGTTGGGAAAATTCAATTTGAGAATCATAGATATCGCGCAAAATACCAACGCTCATAGGCACCTTTGGCACAGCATAACGCTGGCGAGTTAAATCATGATATTCGTAGCTAGAGTCTTTCCCACCTGAATAGCAAATATCTTTTTCTGGAGATGAGAGACGTTTATAACGTTTGATATCTTCCAGCTGTTGATTAAGGGTTTCCATTGAACGTTTCTTGATTTCCATGTTACCAGAGTTAGACGTAACCGCTTGTACTGTACTGTTTTCGGCTACTGATTTCACAGGATGAGCAACTAATCCTCGG]

[-] EMBL AL932444             [CGTCGTATGGCCCAACCAATTTAAGTCCGAACTGCAAAAATGTTTCTTCCGGTTTTATCTGGGTTTTCAANTGCTTGTACTTGGCAAAACTGCCACAGATCTTCGAAGCACGGTGGCATTAGGACAAGAAATTTGTGTTTGATGAATTTTTTAGGTTCATTGCACAATTCCTTGTATTCAGCTTGTTGGGAAAATTCAATTTGAGAATCATAGATATCGCGCAAAATACCAACGCTCATAGGCACCTTTGGCACAGCATAACGCTGGCGAGTTAAATCATGATATTCGTAGCTAGAGTCTTTCCCACCTGAATAGCAAATATCTTTTTCTGGAGATGAGAGACGTTTATAACGTTTGATATCTTCCAGCTGTTGATTAAGGGTTTCCATTGAACGTTTCTTGATTTCCATGTTACCAGAGTTAGACGTAACCGCTTGTACTGTACTGTTTTCGGCTACTGATTTCACAGGATGAGCAACTAATCCTCGG]


>consensus_8573#3 CGTCGTATGGCCCAACCAATTTAAGTCCGAACTGCAAAAATGTTTCTTCCGGTTTTATCT GGGTTTTCAANTGCTTGTACTTGGCAAAACTGCCACAGATCTTCGAAGCACGGTGGCATT AGGACAAGAAATTTGTGTTTGATGAATTTTTTAGGTTCATTGCACAATTCCTTGTATTCA GCTTGTTGGGAAAATTCAATTTGAGAATCATAGATATCGCGCAAAATACCAACGCTCATA GGCACCTTTGGCACAGCATAACGCTGGCGAGTTAAATCATGATATTCGTAGCTAGAGTCT TTCCCACCTGAATAGCAAATATCTTTTTCTGGAGATGAGAGACGTTTATAACGTTTGATA TCTTCCAGCTGTTGATTAAGGGTTTCCATTGAACGTTTCTTGATTTCCATGTTACCAGAG TTAGACGTAACCGCTTGTACTGTACTGTTTTCGGCTACTGATTTCACAGGATGAGCAACT AATCCTCGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8573#1      ------------------------------------------------------------
consensus_8573#3      ------------------------------------------------------------
consensus_8573#0      GATGTGTCATTAATGTAAAAGCGAATGTACCTCTCTGCGTATTAAAGGAAGGGAGCTCAA 60
consensus_8573#2      ------------------------------------------------------------
                                                                                  

consensus_8573#1      ------------------------------------------------------------
consensus_8573#3      ------------------------------------------------------------
consensus_8573#0      CATGCAATATTTCAATAGTTTATTTCAATTACCCGCGAGCAAATCCAAATTAATTCCTTC 120
consensus_8573#2      ------------------------------------------------------------
                                                                                  

consensus_8573#1      ------------------------------------------------------------
consensus_8573#3      ------------------------------------------------------------
consensus_8573#0      TCTGCGGTTATCTAAATGAGACTTTATGATGGCGATGTATTGAGGGCGATTAACCATGGA 180
consensus_8573#2      ------------------------------------------------------------
                                                                                  

consensus_8573#1      ------------------------------------------------------------
consensus_8573#3      ------------------------------------------------------------
consensus_8573#0      ATATCCGGTAAAAAAAAGAGGCTTCATGACCTCATGTAGACTTTTCACACCAGAGCAGAA 240
consensus_8573#2      ------------------------------------------------------------
                                                                                  

consensus_8573#1      ------------------------------------------------------------
consensus_8573#3      ------------------------------------------------------------
consensus_8573#0      GAAGTCCAACGCAAGTTCAAGGACCGTTCCGAAATCACACTCGTCTGTTGCCAAATCTGC 300
consensus_8573#2      ------------------------------------------------------------
                                                                                  

consensus_8573#1      ------------------------------------------------------------
consensus_8573#3      ------------------------------------------------------------
consensus_8573#0      AGCGGTTATTATGGGCTGTAATTCTCTCATGAGTTCTTGGTATTCGAGGTTATTTTCAAA 360
consensus_8573#2      ------------------------------------------------------------
                                                                                  

consensus_8573#1      ------------------------------------------------------------
consensus_8573#3      ------------------------------------------------------------
consensus_8573#0      ACGATTCAGATTTTCGAATTTGGAAAGAATGGCTCGAATTTTTGCATCACTTTCTAGCAG 420
consensus_8573#2      ------------------------------------------------------------
                                                                                  

consensus_8573#1      ------------------------------------------------------------
consensus_8573#3      ------------------------------------------------------------
consensus_8573#0      AGGTCTATATCCTATGTTGGTCTTCCTATCGTAAGGAACCACCAGACCAACCTTGTGGAA 480
consensus_8573#2      ------------------------------------------------------------
                                                                                  

consensus_8573#1      ------------------------------------------------------------
consensus_8573#3      ------------------------------------------------------------
consensus_8573#0      AGTTTTGCTAACTATCTGTGCCTTGCGAGACTTTTGTTTCTCGCAGCAATTTAAAGCAAT 540
consensus_8573#2      ------------------------------------------------------------
                                                                                  

consensus_8573#1      ------------------------------------------------------------
consensus_8573#3      ------------------------------------------------------------
consensus_8573#0      GTCTTTCGACTGAGCCCAATCGCTGATAAGTTTTTTCATATCGGATATTTTTTTTTTGTT 600
consensus_8573#2      ------------------------------------------------------------
                                                                                  

consensus_8573#1      -----------------CATAGTTTCCCAAGAAATGCAATATTGCATCAAAAATGTTTTC 43
consensus_8573#3      ------------------------------------------------------------
consensus_8573#0      GAATGGCGTCACAGATGCATAGTTTCCCAAGAAATGCAATATTGCATCAAAAATGTTTTC 660
consensus_8573#2      ------------------------------------------------------------
                                                                                  

consensus_8573#1      ACCAACAATTAGAAACTCGCAGCCTTTTTTAACATCGTTCCAGGCCACTAAACCATCCGT 103
consensus_8573#3      ------------------------------------------------------------
consensus_8573#0      ACCAACAATTAGAAACTCGCAGCCTTTTTTAACATCGTTCCAGGCCACTAAACCATCCGT 720
consensus_8573#2      ------------------------------------------------------------
                                                                                  

consensus_8573#1      GTTATCTGGACTATCTCTCCAATAGCCGTAATGTACACCAGAGTTTTGTTGCACGATTAT 163
consensus_8573#3      ------------------------------------------------------------
consensus_8573#0      GTTATCTGGACTATCTCTCCAATAGCCGTAATGCACACCAGAGTTTTGTTGCACGATTAT 780
consensus_8573#2      ---------------------------------------CCTTGCGAGACTTTTGTTTCT 21
                                                                                  

consensus_8573#1      CGTCTGAAATTCAGGTGGATCATAGAAAAAACGCCAATGGCGCAAATAATCTCCAGGTTC 223
consensus_8573#3      ------------------------------------------------------------
consensus_8573#0      CGTCTGAAATTCAGGTGGATCATAGAAAAAACGCCAATGGCGCAAATAATCTCCAGGTTC 840
consensus_8573#2      CGCAGCAATTTAAAGCAATGTCTTTCGACTGAGCCCAATCGCTGATAAGTTTTTTCATAT 81
                                                                                  

consensus_8573#1      GTGAACTTTCGCGCGGTCAAACTTTCCTGCGAGAACGTCGTATGGCCCAACCAATTTAAG 283
consensus_8573#3      -----------------------------------CGTCGTATGGCCCAACCAATTTAAG 25
consensus_8573#0      GTGAACTTTCGCGCGGTCAAACTTTCCTGCGAGAACGTCGTATGGCCCAACCAATTTAAG 900
consensus_8573#2      CGGATATTTTTTTTTGTTGAATGGCGTCACAGATGCATAGTTT--CCCAAGAAATGCAAT 139
                                                         * * ** *  *****  ***  ** 

consensus_8573#1      TCCGAAA-ACAAAAATGTTTCTTCCGGTTTTATCTGGGTTTTCAAT-GCTTGTACTTGGC 341
consensus_8573#3      TCCGAACTGCAAAAATGTTTCTTCCGGTTTTATCTGGGTTTTCAANTGCTTGTACTTGGC 85
consensus_8573#0      TCCGAACTGCAAAAATGTTTCTTCCGGTTTTATCTGGGTTTTCAAT-GCTTGTACTTGGC 959
consensus_8573#2      ATTGCAT--CAAAAATGTTTTCACCAAC---AATTAGAAACTCGCA-----GCCTTTTTT 189
                         * *   ***********   **      *  * *    **        *   **   

consensus_8573#1      AAAACTGCCACAGATCTTCGAAGCA-CGGTGGCATTAGGACAAGAAATT---TGTGTTTG 397
consensus_8573#3      AAAACTGCCACAGATCTTCGAAGCA-CGGTGGCATTAGGACAAGAAATT---TGTGTTTG 141
consensus_8573#0      AAAACTGCCACAGATCTTCGAAGCA-CGGTGGCATTAGGACAAGAAATT---TGTGTTTG 1015
consensus_8573#2      AACATCGTTCCAGGCCACTAAACCATCCGTGTTATCTGGACTATCTCTCCAATAGCCGTA 249
                      ** *  *   ***  *    ** ** * ***  **  **** *    *    *     * 

consensus_8573#1      ATGAATTTTTTAGGTTCATTGCACAATTCCTTGTATTCAGCTT----------------- 440
consensus_8573#3      ATGAATTTTTTAGGTTCATTGCACAATTCCTTGTATTCAGCTTGTTGGGAAAATTCAATT 201
consensus_8573#0      ATGAATTTTTTAGGTTCATTGCACAATTCCTTGTATTCAGCTTGTTGGGAAAATTCAATT 1075
consensus_8573#2      ATGCACACCAGAGTTTTGTTGCACGATTA-TCGTCTGAAATTCAGGTGGATCATAGAA-- 306
                      *** *      ** **  ****** ***  * ** *  *  *                  

consensus_8573#1      -----------------------------------------------TGGCACAGCATAA 453
consensus_8573#3      TGAGAATCATAGATATCGCGCAAAATACCAACGCTCATAGGCACCTTTGGCACAGCATAA 261
consensus_8573#0      TGAGAATCATAGATATCGCGCAAAATACCAACGCTCATAGGCACCTTTGGCACAGCATAA 1135
consensus_8573#2      ---AAAACGCCAATGGCGCAAATAATCTCCAGGTTCGTGAA---CTTTCGCGCGGTCAAA 360
                                                                     * ** * *   **

consensus_8573#1      CGCTGGCGAGTTAAATCATGATATT-CGTAGCTAGAGTCTTTCCCACCTGAATAGCAAAT 512
consensus_8573#3      CGCTGGCGAGTTAAATCATGATATT-CGTAGCTAGAGTCTTTCCCACCTGAATAGCAAAT 320
consensus_8573#0      CGCTGGCGAGTTAAATCATGATATT-CGTAGCTAGAGTCTTTCCCACCTGAATAGCAAAT 1194
consensus_8573#2      CTTTCCTGCG--AGAACGTCGTATGGCCCAACCAATTTAAGTCCGAACTGAATAGCAAAT 418
                      *  *   * *  * * * *  ***  *  * * *   *   *** * *************

consensus_8573#1      ATCTTTTTCTGGAGATGAGAGACGTTTATAACGTTTGATATCTTCCAGCTGTTGATTAAG 572
consensus_8573#3      ATCTTTTTCTGGAGATGAGAGACGTTTATAACGTTTGATATCTTCCAGCTGTTGATTAAG 380
consensus_8573#0      ATCTTTTTCTGGAGATGAGAGACGTTTATAACGTTTGATATCTTCCAGCTGTTGATTAAG 1254
consensus_8573#2      ATCTTTTTCTGGAGATGAGAGACGTTTATAACGTTTGATATCTTCCAGCTGTTGATTAAG 478
                      ************************************************************

consensus_8573#1      GGTTTCCATTGAACGTTTCTTGATTTCCATGTTACCAGAGTTAGACGTAACCGCTTGTAC 632
consensus_8573#3      GGTTTCCATTGAACGTTTCTTGATTTCCATGTTACCAGAGTTAGACGTAACCGCTTGTAC 440
consensus_8573#0      GGTTTCCATTGAACGTTTCTTGATTTCCATGTTACCAGAGTTAGACGTAACCGCTTGTAC 1314
consensus_8573#2      GGTTTCCATTGAACGTTTCTTGATTTCCATGTTACCAGAGTTAGACGTAACCGCTTGTAC 538
                      ************************************************************

consensus_8573#1      TGTAATGTTTTCGGCTACTGATTTCAACAGGATGAGCAA--------------------- 671
consensus_8573#3      TGTACTGTTTTCGGCTACTGATTTCA-CAGGATGAGCAACTAATCCTCGG---------- 489
consensus_8573#0      TGTACTGTTTTCGGCTACTGATTTCA-CAGGATGAGCAAACTTTTCTTTATGCGCAGGAT 1373
consensus_8573#2      TGTACTGTTTTCGGCTACTGATTTCA-CAGGATGAGCAAACTTTTCTTTATGCGCAGGAT 597
                      **** ********************* ************                     

consensus_8573#1      ------------------------------------------------------------
consensus_8573#3      ------------------------------------------------------------
consensus_8573#0      TCTGCTGATAACATTCAGCGCCATATTTGCAATCGGGTTTGTTCATCTGTACTGTGATCT 1433
consensus_8573#2      TCTGCTGATAACATTCCGG----------------------------------------- 616
                                                                                  

consensus_8573#1      ------------------------------------------------------------
consensus_8573#3      ------------------------------------------------------------
consensus_8573#0      TCGCTTACTTTAACCCGTACGAATGAATTTGATGATATTTTTTGGCGTTTATATGCGACT 1493
consensus_8573#2      ------------------------------------------------------------
                                                                                  

consensus_8573#1      -----------
consensus_8573#3      -----------
consensus_8573#0      TCTGGTAGTTG 1504
consensus_8573#2      -----------
                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)