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Anopheles gambiae
cluster # 8586 cluster # 8586       Sequences # 11       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8586#0 length = 909 sequences # 7  
consensus_8586#1 length = 712 sequences # 1  
consensus_8586#2 length = 537 sequences # 1  
consensus_8586#3 length = 451 sequences # 1  
consensus_8586#4 length = 425 sequences # 1  

consensusID : consensus_8586#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 909
fasta sequence
                              [CCGAACAACAATTAGCTAGCCTTGATCGGGTGAATTTCAAAGAATGGAATAAGGAAAATCGTGCAGAATTCATAATAACTTTGAACATCATTCTACAAAAGTTTAATTAAACTTTATAGTTGGTGCAGATCGTATATAATAATATTTCAAATCTCAAAAGTGTCGAGAGACTACGAAAGCGTTCGTCATTGGTTCTGGTTGCAGTACAGCTCTATAGGGCTCAGGGAACACATTCGGTTCGATTCGATCGATAACTGAATAGATGTGCGTCTTCTAGAAAGTGCCGAGCAGGTGTGTGCTGTGCAAGATCCAAACCACGTAAAATGCCGCAGGAAATTAAACGGGAACGTAAAACTGCTCAGTCAATGATGCGCCCGAAATCTATTCACTGGAATGAAGCACCACTATCCCCCTGTCCCATCCCCGATATTAGTGACGATGAGCTGGTGTCGATTACGGTACGCGATCTCAATCGTACGCTTAAAATGAGAGGTCTAACCCGCGAGGAAATTGTGCGCATGAAGCAGCGGCGTCGTACGCTGAAAAATCGAGGATATGCCGCCAGCTGCCGCATAAAGCGCATCGAGCAGAAGGATGAACTGGAGACGGAAAAATCACAAGAATGGCGGG-ATATGGAGCTGATGCACGAGGAAACCGGTCGATTGCAGGAAGAGAACGATTCGCTCCGTAACAAATACGAGGCGTTGCGAAAGTTTGCTCTTTCGAAAAAGATTCCACTACCG-CCGGAGCTTGACGTGCTGTGAAGTGAGGTCAAGACGTGGCCAATGACCGTGCCGAATGGTTCACTGCTGTAACTAATTTGNTTATATTCCATCTCAGTACTTCGATTAGTATAATTGNATATTGAACATTAAAATAATAAAGTAACATTTTATATTCTAAAAAAAA]

[+] EMBL BM582828             [CCGAACAACAATTAGCTAGCCTTGATCGGGTGAATTTCAAAGAATGGAATAAGGAAAATCGTGCAGAATTCATAATAACTTTGAACATCATTCTACAAAAGTTTAATTAAACTTTATAGTTGGTGCAGATCGTATATAATAATATTTCAAATCTCAAAAGTGTCGAGAGACTACGAAAGCGTTCGTCATTGGTTCTGGTTGCAGTACAGCTCTATAGGGCTCAGGGAACACATTCGGTTCGATTCGATCGATAACTGAATAGATGTGCGTCTTCTAGAAAGTGCCGAGCAGGTGTGTGCTGTGCAAGATCCAAACCACGTAAAATGCCGCAGGAAATTAAACGGGAACGTAAAACTGCTCAGTCAATGATGCGCCCGAAATCTATTCACTGGAATGAAGCACCACTATCCCCCTGTCCCATCCCCGATATTAGTGACGATGAGCTGGTGTCGATTACGGTACGCGATCTCAATCGTACGCTTAAAATGAGAGGTCTAACCCGCGAGGAAATTGTGCGCATGAAGCAGCGGCGTCGTACGCTGAAAAATCGAGGATATGCCGCCAGCTGCCGCATAAAGCGCATCGAGCAGAAGGATGAACTGGAGACGGAAAAATCACAAGAATGGCGGGCATATGGAGCTGATGCACGAGGAAACCG                                                                                                                                                                                                                                                             ]
[+] EMBL BM633238             [                         cCGGGTGAATTTCAAAGAATGGAATAAGGAAAATCGTGCAGAATTCATAATAACTTTGAACATCATTCTACAAAAGTTTAATTAAACTTTATAGTTGGTGCAGATCGTATATAATAATATTTCAAATCTCAAAAGTGTCGAGAGACTACGAAAGCGTTCGTCATTGGTTCTGGTTGCAGTACAGCTCTATAGGGCTCAGGGAACACATTCGGTTCGATTCGATCGATAACTGAATAGATGTGCGTCTTCTAGAAAGTGCCGAGCAGGTGTGTGCTGTGCAAGATCCAAACCACGTAAAATGCCGCAGGAAATTAAACGGGAACGTAAAACTGCTCAGTCAATGATGCGCCCGAAATCTATTCACTGGAATGAAGCACCACTATCCCCCTGTCCCATCCCCGATATTAGTGACGATGAGCTGGTGTCGATTACGGTACGCGATCTCAATCGTACGCTTAAAATGAGAGGTCTAACCCGCGAGGAAATTGTGCGCATGAAGCAGCGGCGTCGTACGTTGAAAAATCGAGGATATGCCGCCAGCTGCCGCATAAAGCGCATCGAGCAGAAGGATGAACTGGAGACGGAAAAATCACAAGAATGGCGGG ATATGGAGCTGATGCACGAGGAAACCGGTCGATTGCAGGAAGAGAACGATTCGCTCCGTAACAAATACGAG                                                                                                                                                                                                                 ]
[+] EMBL BX625182             [                            GGTGAATTTCAAAGAATGGAATAAGGAAAATCGTGCAGAATTCATAATAACTTTGAACATCATTCTACAAAAGTTTAATTAAACTTTATAGTTGGTGCAGATCGTATATAATAATATTTCAAATCTCAAAAGTGTCGAGAGACTACGAAAGCGTTCGTCATTGGTTCTGGTTGCAGTACAGCTCTATAGGGCTCAGGGAACACATTCGGTTCGATTCGATCGATAACTGAATAGATGTGCGTCTTCTAGAAAGTGCCGAGCAGGTGTGTGCTGTGCAAGATCCAAACCACGTAAAATGCCGCAGGAAATTAAACGGGAACGTAAAACTGCTCAGTCAATGATGCGCCCGAAATCTATTCACTGGAATGAAGCACCACTATCCCCCTGTCCCATCCCCGATATTAGTGACGATGAGCTGGTGTCGATTACGGTACGCGATCTCAATCGTACGCTTAAAATGAGAGGTCTAACCCGCGAGGAAATTGTGCGCATGAAGCAGCGGCGTCGTACGCTGAAAAATCGAGGATATGCCGCCAGCTGCCGCATAAAGCGCATCGAGCAGAAGGATGAACTGGAGACGGAAAAATCACAAGAATGGCGGG ATATGGAGCTGATGCACGAGGAAACCGGTCGATTGCAGGAAGAGAACGATTCGCTCCGTAACAAATACGAGGCGTTGCGAAAGTTTGCTCTTTCGAAAAAGATTCCACTACCG CCGGAGCTTGACGTGCTGTGAAGTGAGGTCAAGACGTGGCCAATGACCGTGCCGAATGGTTCACTGCTGTAACTAATTTGNTTATATTCCATCTCAGTACTTCGATTAGTATAATTGNATATTGAACATTAAAATA                              ]
[+] EMBL BX628208             [                                 ATTTCAAAGAATGGAATAAGGAAAATCGTGCAGAATTCATAATAACTTTGAACATCATTCTACAAAAGTTTAATTAAACTTTATAGTTGGTGCAGATCGTATATAATAATATTTCAAATCTCAAAAGTGTCGAGAGACTACGAAAGCGTTCGTCATTGGTTCTGGTTGCAGTACAGCTCTATAGGGCTCAGGGAACACATTCGGTTCGATTCGATCGATAACTGAATAGATGTGCGTCTTCTAGAAAGTGCCGAGCAGGTGTGTGCTGTGCAAGATCCAAACCACGTAAAATGCCGCAGGAAATTAAACGGGAACGTAAAACTGCTCAGTCAATGATGCGCCCGAAATCTATTCACTGGAATGAAGCACCACTATCCCCCTGTCCCATCCCCGATATTAGTGACGATGAGCTGGTGTCGATTACGGTACGCGATCTCAATCGTACGCTTAAAATGAGAGGTCTAACCCGCGAGGAAATTGTGCGCATGAAGCAGCGGCGTCGTACGCTGAAAAATCGAGGATATGCCGCCAGCTGCCGCATAAAGCGCATCGAGCAGAAGGATGAACT                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX625380             [                                                               CAGAATTCATAATAACTTTGAACATCATTCTACAAAAGTTTAATTAAACTTTATAGTTGGTGCAGATCGTATATAATAATATTTCAAATCTCAAAAGTGTCGAGAGACTACGAAAGCGTTCGTCATTGGTTCTGGTTGCAGTACAGCTCTATAGGGCTCAGGGAACACATTCGGTTCGATTCGATTGATAACTGAATAGATGTGCGTCTTCTAGAAAGTGCCGAGCAGGTGTGTGCTGTGCAAGATCCAAACCACGTAAAATGCCGCAGGAAATTAAACGGGAACGTAAAACTGCTCAGTCAATGATGCGCCCGAAATCTATTCACTGGAATGAAGCACCACTATCCCCCTGTCCCATCCCCGATATTAGTGACGATGAGCTGGTGTCGATTACGGTACGCGATCTCAATCGTACGCTTAAAATGAGAGGTCTAACCCGCGAGGAAATTNTGCGCATGAAGCAGCGGCGTCGTACGTTGAAAAATCGAGGATATGCCGCCAGCTGCCGCATAAAGCGNATCGAGCAGAAGGATGAACTGGAGACGGAAAAATCACAAGAATGGCGGG ATATGGAGCTGATGCACGAGGAAACCGGTCGATTGCANGAAGAGAACGATTCGCTCCGTAACAAATACGAGGCGTTGCGAAAGTTTGCTCTTTCNAAAAAGATTCCACTACCGCCCGGAGCTTGACGTGC                                                                                                                                                      ]
[+] EMBL BX627485             [                                                                                                                                                                                                                                                                                                                    TCCAAACCACGTAAAATGCCGCAGGAAATTAAACGGGAACGTAAAACTGCTCAGTCAATGATGCGCCCGAAATCTATTCACTGGAATGAAGCACCACTATCCCCCTGTCCCATCCCCGATATTAGTGACGATGAGCTGGTGTNGATTACGGTACGCGATCTCAATCGCACGCTTAAAATGAGAGGTCTAACCCGCCAGGAAATTGTGC                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL AGA283671            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAGGTCTAACCCGCGAGGAAATTGTGCGCATGAAGCAGCGGCGTCGTACGTTGAAAAATCGAGGATATGCCGCCAGCTGCCGCATAAAGCGCATCGAGCAGAAGGATGAACTGGAGACGGAAAAATCACAAGAATGGCGGG ATATGGAGCTGATGCACGAGGAAACCGGTCGATTGCAGGAAGAGAACGATTCGCTCCGTAACAAATACGAGGCGTTGCGAAAGTTTGCTCTTTCGAAAAAGATTCCACTACCG CCGGAGCTTGACGTGCTGTGAAGTGAGGTCAAGACGTGGCCAATGACCGTGCCGAATGTTTCACTGCTGTAACTAACTTGTTTATATTCCATCTCAGTACTTCGATTAGTATAATTGTATATTGAACATTAAAATAATAAAGTAACATTTTATATTCTAAAAAAAA]


>consensus_8586#0 CCGAACAACAATTAGCTAGCCTTGATCGGGTGAATTTCAAAGAATGGAATAAGGAAAATC GTGCAGAATTCATAATAACTTTGAACATCATTCTACAAAAGTTTAATTAAACTTTATAGT TGGTGCAGATCGTATATAATAATATTTCAAATCTCAAAAGTGTCGAGAGACTACGAAAGC GTTCGTCATTGGTTCTGGTTGCAGTACAGCTCTATAGGGCTCAGGGAACACATTCGGTTC GATTCGATCGATAACTGAATAGATGTGCGTCTTCTAGAAAGTGCCGAGCAGGTGTGTGCT GTGCAAGATCCAAACCACGTAAAATGCCGCAGGAAATTAAACGGGAACGTAAAACTGCTC AGTCAATGATGCGCCCGAAATCTATTCACTGGAATGAAGCACCACTATCCCCCTGTCCCA TCCCCGATATTAGTGACGATGAGCTGGTGTCGATTACGGTACGCGATCTCAATCGTACGC TTAAAATGAGAGGTCTAACCCGCGAGGAAATTGTGCGCATGAAGCAGCGGCGTCGTACGC TGAAAAATCGAGGATATGCCGCCAGCTGCCGCATAAAGCGCATCGAGCAGAAGGATGAAC TGGAGACGGAAAAATCACAAGAATGGCGGGATATGGAGCTGATGCACGAGGAAACCGGTC GATTGCAGGAAGAGAACGATTCGCTCCGTAACAAATACGAGGCGTTGCGAAAGTTTGCTC TTTCGAAAAAGATTCCACTACCGCCGGAGCTTGACGTGCTGTGAAGTGAGGTCAAGACGT GGCCAATGACCGTGCCGAATGGTTCACTGCTGTAACTAATTTGNTTATATTCCATCTCAG TACTTCGATTAGTATAATTGNATATTGAACATTAAAATAATAAAGTAACATTTTATATTC TAAAAAAAA



consensusID : consensus_8586#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 712
fasta sequence
                              [CCGGTGGAACAACAATTAGCTAGCCTTGATCGGGTGAATTTCAAAGAATGGAATAAGGAAAATCGTGCAGAATTCATAATAACTTTGAACATCATTCTACAAAAGTTTAATTAAACTTTATAGTTGGTGCAGATCGTATATAATAATATTTCAAATCTCAAAAGTGTCGAGAGACTACGAAAGCGTTCGTCATTGGTTCTGGTTGCAGTACAGCTCTATAGGGCTCAGGCACTATCTGGTTTGTGCCCTTTTTTCATTGCATGGCGTCACCTAAAACATTCTACCCATAGGAACACATTCGGTTCGATTCGATCGATAACTGAATAGATGTGCGTCTTCTAGAAAGTGCCGAGCAGGTGTGTGCTGTGCAAGATCCAAACCACGTAAAATGCCGCAGGAAATTAAACGGGAACGTAAAACTGCTCAGGCACCACTATCCCCCTGTCCCATCCCCGATATTAGTGACGATGAGCTGGTGTCGATTACGGTACGCGATCTCAATCGTACGCTTAAAATGAGAGGTCTAACCCGCGAGGAAATTGTGCGCATGAAGCAGCGGCGTCGTACGCTGAAAAATCGAGGATATGCCGCCAGCTGCCGCATAAAGCGCATCGAGCAGAAGGATGAACTGGAGACGGAAAAATCACAAGAATGGCGGGATATGGAGCTGATGCACGAGGAAACCGGTCGATTGCAGGAAGAGAACGATTCG]

[+] EMBL BM605525             [CCGGTGGAACAACAATTAGCTAGCCTTGATCGGGTGAATTTCAAAGAATGGAATAAGGAAAATCGTGCAGAATTCATAATAACTTTGAACATCATTCTACAAAAGTTTAATTAAACTTTATAGTTGGTGCAGATCGTATATAATAATATTTCAAATCTCAAAAGTGTCGAGAGACTACGAAAGCGTTCGTCATTGGTTCTGGTTGCAGTACAGCTCTATAGGGCTCAGGCACTATCTGGTTTGTGCCCTTTTTTCATTGCATGGCGTCACCTAAAACATTCTACCCATAGGAACACATTCGGTTCGATTCGATCGATAACTGAATAGATGTGCGTCTTCTAGAAAGTGCCGAGCAGGTGTGTGCTGTGCAAGATCCAAACCACGTAAAATGCCGCAGGAAATTAAACGGGAACGTAAAACTGCTCAGGCACCACTATCCCCCTGTCCCATCCCCGATATTAGTGACGATGAGCTGGTGTCGATTACGGTACGCGATCTCAATCGTACGCTTAAAATGAGAGGTCTAACCCGCGAGGAAATTGTGCGCATGAAGCAGCGGCGTCGTACGCTGAAAAATCGAGGATATGCCGCCAGCTGCCGCATAAAGCGCATCGAGCAGAAGGATGAACTGGAGACGGAAAAATCACAAGAATGGCGGGATATGGAGCTGATGCACGAGGAAACCGGTCGATTGCAGGAAGAGAACGATTCG]


>consensus_8586#1 CCGGTGGAACAACAATTAGCTAGCCTTGATCGGGTGAATTTCAAAGAATGGAATAAGGAA AATCGTGCAGAATTCATAATAACTTTGAACATCATTCTACAAAAGTTTAATTAAACTTTA TAGTTGGTGCAGATCGTATATAATAATATTTCAAATCTCAAAAGTGTCGAGAGACTACGA AAGCGTTCGTCATTGGTTCTGGTTGCAGTACAGCTCTATAGGGCTCAGGCACTATCTGGT TTGTGCCCTTTTTTCATTGCATGGCGTCACCTAAAACATTCTACCCATAGGAACACATTC GGTTCGATTCGATCGATAACTGAATAGATGTGCGTCTTCTAGAAAGTGCCGAGCAGGTGT GTGCTGTGCAAGATCCAAACCACGTAAAATGCCGCAGGAAATTAAACGGGAACGTAAAAC TGCTCAGGCACCACTATCCCCCTGTCCCATCCCCGATATTAGTGACGATGAGCTGGTGTC GATTACGGTACGCGATCTCAATCGTACGCTTAAAATGAGAGGTCTAACCCGCGAGGAAAT TGTGCGCATGAAGCAGCGGCGTCGTACGCTGAAAAATCGAGGATATGCCGCCAGCTGCCG CATAAAGCGCATCGAGCAGAAGGATGAACTGGAGACGGAAAAATCACAAGAATGGCGGGA TATGGAGCTGATGCACGAGGAAACCGGTCGATTGCAGGAAGAGAACGATTCG



consensusID : consensus_8586#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 537
fasta sequence
                              [GAATCCCCCGAGGTTAGTGTCGATTACGGTACGCGATCTCATCGTACGCTTAAAATGAGAGGTCTAACCCGCGAGGAAATTGTGCGCATGAAGCAGCGGCGTCGTACGCTGAAAAATCGAGGATATGCCGCCAGCTGCCGCATAAAGCGCATCGAGCAGAAGGATGAACTGGAGACGGAAAAATCACAAGAATGGCGGGATATGGAGCTGATGCACGAGGAAACCGGTCGATTGCAGGAAGAGAACGATTCGTCCGTAACAAATACGAGGCGTTGCGAAAGTTTGCTCTTTCGAAAAAGATTCCACTACCGCCGGAGCTTGACGTGCTGTGAACGTGAGGTCAAGACGTGGCCAATGACCGTGCCGAATGTTTCACTGCTGTAACTAATTTGTTTATATTCCATNCTCAGTACTTCGATTAGTATAATTGTATATTGAACATTAAANTAATAAAGTAACATNTNATATTCTACACTCGCTTGCACGTGGCCATGCTTCGACACTACGTGCAATTGTAGATCAATTTGAATATTCTGA]

[+] EMBL AL694602             [GAATCCCCCGAGGTTAGTGTCGATTACGGTACGCGATCTCATCGTACGCTTAAAATGAGAGGTCTAACCCGCGAGGAAATTGTGCGCATGAAGCAGCGGCGTCGTACGCTGAAAAATCGAGGATATGCCGCCAGCTGCCGCATAAAGCGCATCGAGCAGAAGGATGAACTGGAGACGGAAAAATCACAAGAATGGCGGGATATGGAGCTGATGCACGAGGAAACCGGTCGATTGCAGGAAGAGAACGATTCGTCCGTAACAAATACGAGGCGTTGCGAAAGTTTGCTCTTTCGAAAAAGATTCCACTACCGCCGGAGCTTGACGTGCTGTGAACGTGAGGTCAAGACGTGGCCAATGACCGTGCCGAATGTTTCACTGCTGTAACTAATTTGTTTATATTCCATNCTCAGTACTTCGATTAGTATAATTGTATATTGAACATTAAANTAATAAAGTAACATNTNATATTCTACACTCGCTTGCACGTGGCCATGCTTCGACACTACGTGCAATTGTAGATCAATTTGAATATTCTGA]


>consensus_8586#2 GAATCCCCCGAGGTTAGTGTCGATTACGGTACGCGATCTCATCGTACGCTTAAAATGAGA GGTCTAACCCGCGAGGAAATTGTGCGCATGAAGCAGCGGCGTCGTACGCTGAAAAATCGA GGATATGCCGCCAGCTGCCGCATAAAGCGCATCGAGCAGAAGGATGAACTGGAGACGGAA AAATCACAAGAATGGCGGGATATGGAGCTGATGCACGAGGAAACCGGTCGATTGCAGGAA GAGAACGATTCGTCCGTAACAAATACGAGGCGTTGCGAAAGTTTGCTCTTTCGAAAAAGA TTCCACTACCGCCGGAGCTTGACGTGCTGTGAACGTGAGGTCAAGACGTGGCCAATGACC GTGCCGAATGTTTCACTGCTGTAACTAATTTGTTTATATTCCATNCTCAGTACTTCGATT AGTATAATTGTATATTGAACATTAAANTAATAAAGTAACATNTNATATTCTACACTCGCT TGCACGTGGCCATGCTTCGACACTACGTGCAATTGTAGATCAATTTGAATATTCTGA



consensusID : consensus_8586#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 451
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCCTTGATCGGGTGAATTTCAAAGAATGGAATAAGGAAAATCGTGCAGAATTCATAATAACTTTGAACATCATTCTACAAAAGTTTAATTAAACTTTATAGTTGGTGCAGATCGTATATAATAATATTTCAAATCTCAAAAGTGTCGAGAGACTACGAAAGCGTTCGTCATTGGTTCTGGTTGCAGTACAGCTCTATAGGGCTCAGGCACTATCTGGTTTGTGCCCTTTTTTTCATTGCATGGCGTCACCTAAAACATTCTACCCATAGGAACACATTCGGTTCGATTCGATCGATAACTGAATAGATGTGCGTCTTCTAGAAAGTGCCGAGCAGGTGTGTGCTGTGCAAGATCCAAACCACGTAAAATGCCGCAGGAAATTAAACGGGAACGTAAAACTGCTCAGTCAATGATGCGCCCGAAAT]

[+] EMBL BM656376             [CCGCCCACGCGTCCGCCCACGCGTCCGCCTTGATCGGGTGAATTTCAAAGAATGGAATAAGGAAAATCGTGCAGAATTCATAATAACTTTGAACATCATTCTACAAAAGTTTAATTAAACTTTATAGTTGGTGCAGATCGTATATAATAATATTTCAAATCTCAAAAGTGTCGAGAGACTACGAAAGCGTTCGTCATTGGTTCTGGTTGCAGTACAGCTCTATAGGGCTCAGGCACTATCTGGTTTGTGCCCTTTTTTTCATTGCATGGCGTCACCTAAAACATTCTACCCATAGGAACACATTCGGTTCGATTCGATCGATAACTGAATAGATGTGCGTCTTCTAGAAAGTGCCGAGCAGGTGTGTGCTGTGCAAGATCCAAACCACGTAAAATGCCGCAGGAAATTAAACGGGAACGTAAAACTGCTCAGTCAATGATGCGCCCGAAAT]


>consensus_8586#3 CCGCCCACGCGTCCGCCCACGCGTCCGCCTTGATCGGGTGAATTTCAAAGAATGGAATAA GGAAAATCGTGCAGAATTCATAATAACTTTGAACATCATTCTACAAAAGTTTAATTAAAC TTTATAGTTGGTGCAGATCGTATATAATAATATTTCAAATCTCAAAAGTGTCGAGAGACT ACGAAAGCGTTCGTCATTGGTTCTGGTTGCAGTACAGCTCTATAGGGCTCAGGCACTATC TGGTTTGTGCCCTTTTTTTCATTGCATGGCGTCACCTAAAACATTCTACCCATAGGAACA CATTCGGTTCGATTCGATCGATAACTGAATAGATGTGCGTCTTCTAGAAAGTGCCGAGCA GGTGTGTGCTGTGCAAGATCCAAACCACGTAAAATGCCGCAGGAAATTAAACGGGAACGT AAAACTGCTCAGTCAATGATGCGCCCGAAAT



consensusID : consensus_8586#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 425
fasta sequence
                              [TATAATGACCCGAACATGACTTGCAATTTGCTTTATTCGGTTTTTCTCAGCACTATCTGGTTTGTGCCCTTTTTTCATTGCATGGCGTCACCTAAAACATTCTACCCATAGGAACACATTCGGTTCGATTCGATCGATAACTGAATAGATGTGCGTCTTCTAGAAAGTGCCGAGCAGGTGTGTGCTGTGCAAGATCCAAACCACGTAAAATGCCGCAGGAAATTAAACGGGAACGTAAAACTGCTCAGGTAAAGTAACATTCAATACACAAATGAAGCATCTATTTTAACTATCGGTAGCAATTACCCCTGAGTGTGTTGCCAGCAGCAGCGTATGTGCAACATGTCTACCACTCGTTTCGTATAGTGTGCTAGAATTAATCTCATATCCATCGAAATGTGTACCCCTTTCTGTATTTGTAGTCA]

[+] EMBL AGA284960            [TATAATGACCCGAACATGACTTGCAATTTGCTTTATTCGGTTTTTCTCAGCACTATCTGGTTTGTGCCCTTTTTTCATTGCATGGCGTCACCTAAAACATTCTACCCATAGGAACACATTCGGTTCGATTCGATCGATAACTGAATAGATGTGCGTCTTCTAGAAAGTGCCGAGCAGGTGTGTGCTGTGCAAGATCCAAACCACGTAAAATGCCGCAGGAAATTAAACGGGAACGTAAAACTGCTCAGGTAAAGTAACATTCAATACACAAATGAAGCATCTATTTTAACTATCGGTAGCAATTACCCCTGAGTGTGTTGCCAGCAGCAGCGTATGTGCAACATGTCTACCACTCGTTTCGTATAGTGTGCTAGAATTAATCTCATATCCATCGAAATGTGTACCCCTTTCTGTATTTGTAGTCA]


>consensus_8586#4 TATAATGACCCGAACATGACTTGCAATTTGCTTTATTCGGTTTTTCTCAGCACTATCTGG TTTGTGCCCTTTTTTCATTGCATGGCGTCACCTAAAACATTCTACCCATAGGAACACATT CGGTTCGATTCGATCGATAACTGAATAGATGTGCGTCTTCTAGAAAGTGCCGAGCAGGTG TGTGCTGTGCAAGATCCAAACCACGTAAAATGCCGCAGGAAATTAAACGGGAACGTAAAA CTGCTCAGGTAAAGTAACATTCAATACACAAATGAAGCATCTATTTTAACTATCGGTAGC AATTACCCCTGAGTGTGTTGCCAGCAGCAGCGTATGTGCAACATGTCTACCACTCGTTTC GTATAGTGTGCTAGAATTAATCTCATATCCATCGAAATGTGTACCCCTTTCTGTATTTGT AGTCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8586#3      ------------------------------------------------------------
consensus_8586#4      ------------------------------------------------------------
consensus_8586#1      ------------------------------------------------------------
consensus_8586#0      CCGAACAACAATTAGCTAGCCTTGATCGGGTGAATTTCAAAGAATGGAATAAGGAAAATC 60
consensus_8586#2      ------------------------------------------------------------
                                                                                  

consensus_8586#3      ------------------------------------------------------------
consensus_8586#4      ------------------------------------------------------------
consensus_8586#1      ------------------------------------------------------------
consensus_8586#0      GTGCAGAATTCATAATAACTTTGAACATCATTCTACAAAAGTTTAATTAAACTTTATAGT 120
consensus_8586#2      ------------------------------------------------------------
                                                                                  

consensus_8586#3      ------------------------------------------------------------
consensus_8586#4      ------------------------------------------------------------
consensus_8586#1      ------------------------------------------------------------
consensus_8586#0      TGGTGCAGATCGTATATAATAATATTTCAAATCTCAAAAGTGTCGAGAGACTACGAAAGC 180
consensus_8586#2      ------------------------------------------------------------
                                                                                  

consensus_8586#3      ------------------------------------------------------------
consensus_8586#4      ------------------------------------------------------------
consensus_8586#1      ------------------------------------------------------------
consensus_8586#0      GTTCGTCATTGGTTCTGGTTGCAGTACAGCTCTATAGGGCTCAGGGAACACATTCGGTTC 240
consensus_8586#2      ------------------------------------------------------------
                                                                                  

consensus_8586#3      ---------------------------------------------------------CCG 3
consensus_8586#4      ------------------------------------------------------------
consensus_8586#1      ------------------------------------------------------------
consensus_8586#0      GATTCGATCGATAACTGAATAGATGTGCGTCTTCTAGAAAGTGCCGAGCAGGTGTGTGCT 300
consensus_8586#2      ------------------------------------------------------------
                                                                                  

consensus_8586#3      CCCACGCGTCCGCCCACGCGTCCGCCTTGATCGGGTGAATTTCAAAGAATGGAATAAGGA 63
consensus_8586#4      ------------------------------------------------------------
consensus_8586#1      -CCGGTGGAACAACAATTAGCTAGCCTTGATCGGGTGAATTTCAAAGAATGGAATAAGGA 59
consensus_8586#0      GTGCAAGATCCAAACCACGTAAAATGCCGCAGGAAATTAAACGGGAACGTAAAACTGCTC 360
consensus_8586#2      ------------------------------------------------------------
                                                                                  

consensus_8586#3      AAATCGTGCAGAATTCATAATAACTTTGAACATCATTCTACAAAAGTTTAATTAAACTTT 123
consensus_8586#4      ------------------------------------------------------------
consensus_8586#1      AAATCGTGCAGAATTCATAATAACTTTGAACATCATTCTACAAAAGTTTAATTAAACTTT 119
consensus_8586#0      AGTCAATGATGCGCCCGAAATCTATTCACTGGAATGAAGCACCACTATCCCCCTGTCCCA 420
consensus_8586#2      ------------------------------------------------------------
                                                                                  

consensus_8586#3      ATAGTTGGTGCAGATCGTATATAATAATATTTCAAATCTCAAAAGTGTCGAGAGACTACG 183
consensus_8586#4      -----------------------------------------------TATAATGACCCGA 13
consensus_8586#1      ATAGTTGGTGCAGATCGTATATAATAATATTTCAAATCTCAAAAGTGTCGAGAGACTACG 179
consensus_8586#0      TCCCCGATATTAGTGACGATGAGCTGGTGTCGATTACGGTACGCGATCTCAATCGTACGC 480
consensus_8586#2      ----------GAATCCCCCGAGGTTAGTGTCGATTACGGTACGCGATCTCA-TCGTACGC 49
                                                                        *         

consensus_8586#3      AAAGCGTTCGTCATTGGTTCTGGTTGCAGTACAGCTCTATAGGGCTCAGGCACTATCTGG 243
consensus_8586#4      ACATGACTTGCAATTTGCTTTATTCG-------GTTTTT-----CTCAG-CACTATCTGG 60
consensus_8586#1      AAAGCGTTCGTCATTGGTTCTGGTTGCAGTACAGCTCTATAGGGCTCAGGCACTATCTGG 239
consensus_8586#0      TTAAAATGAGAGGTCTAACCCGCGAGGAAATTGTGCGCATGAAGCAGCGGCGTCGTACGC 540
consensus_8586#2      TTAAAATGAGAGGTCTAACCCGCGAGGAAATTGTGCGCATGAAGCAGCGGCGTCGTACGC 109
                        *      *   *           *                  *   * *    *  * 

consensus_8586#3      TTTGTGCCCTTTTTTTCATTGCATGGCGTCACCTAAAACATTCTACCCATAGGAACACAT 303
consensus_8586#4      TTTGTGCCCTTTTTT-CATTGCATGGCGTCACCTAAAACATTCTACCCATAGGAACACAT 119
consensus_8586#1      TTTGTGCCCTTTTTT-CATTGCATGGCGTCACCTAAAACATTCTACCCATAGGAACACAT 298
consensus_8586#0      TGAAAAATCGAGGATATGCCGCCAGCTGCCGCATAAAGCGCATCGAGCAGAAGGATGAAC 600
consensus_8586#2      TGAAAAATCGAGGATATGCCGCCAGCTGCCGCATAAAGCGCATCGAGCAGAAGGATGAAC 169
                      *       *     *     **  *  * * * **** *        ** * * *   * 

consensus_8586#3      TCGGTTCGATTCGATCG-ATAACTGAATAGATGTGCGTCTTCTA---GAAAGTGCCGAGC 359
consensus_8586#4      TCGGTTCGATTCGATCG-ATAACTGAATAGATGTGCGTCTTCTA---GAAAGTGCCGAGC 175
consensus_8586#1      TCGGTTCGATTCGATCG-ATAACTGAATAGATGTGCGTCTTCTA---GAAAGTGCCGAGC 354
consensus_8586#0      TGGAGACGGAAAAATCACAAGAATGGCGGGATATGGAGCTGATGCACGAGGAAACCGGTC 660
consensus_8586#2      TGGAGACGGAAAAATCACAAGAATGGCGGGATATGGAGCTGATGCACGAGGAAACCGGTC 229
                      * *   **     ***  *  * **    *** **   **  *    **     ***  *

consensus_8586#3      AGGTGTGTGCTGTGCAAGATCCA-----AACCACGTAAAATGCCGCAGGAAATTAAACGG 414
consensus_8586#4      AGGTGTGTGCTGTGCAAGATCCA-----AACCACGTAAAATGCCGCAGGAAATTAAACGG 230
consensus_8586#1      AGGTGTGTGCTGTGCAAGATCCA-----AACCACGTAAAATGCCGCAGGAAATTAAACGG 409
consensus_8586#0      GATTGCAGGAAGAGAACGATTCGCTCCGTAACAAATACGAGGCGTTGCGAAAGTTTGCTC 720
consensus_8586#2      GATTGCAGGAAGAGAACGATTCG-TCCGTAACAAATACGAGGCGTTGCGAAAGTTTGCTC 288
                         **   *  * * * *** *       * **  **  * **     **** *   *  

consensus_8586#3      GAACGTAAAACTGCTCAGTCAATGATGCGCCCGAAAT----------------------- 451
consensus_8586#4      GAACGTAAAACTGCTCAGGTAAAGTAACATTCAATACACAAATGAAGCATCTATTTTAAC 290
consensus_8586#1      GAACGTAAAACTGCTCAGGCACCACTATCCCCCTGTCCCATCCCCGATATTAGTGACGAT 469
consensus_8586#0      TTTCGAAAAAGATTCCACTACCGCCGGAGCTTGACGTGCTGT--GAA-GTGAGGTCAAGA 777
consensus_8586#2      TTTCGAAAAAGATTCCACTACCGCCGGAGCTTGACGTGCTGT--GAACGTGAGGTCAAGA 346
                         ** ****     **                                           

consensus_8586#3      ------------------------------------------------------------
consensus_8586#4      TATCGGTAGCAATTACCCCTGAG--TGTGTTGCCAGCAGCAGC--GTATGTGCAACATGT 346
consensus_8586#1      GA--GCTGGTGTCGATTACGGTA--CGCGATCTCAATCGTACG--CTTAAAATGAGAGGT 523
consensus_8586#0      CGTGGCCAATGACCGTGCCGAATGGTTCACTGCTGTAACTAATTTGNTTATATTCCATC- 836
consensus_8586#2      CGTGGCCAATGACCGTGCCGAATGTTTCACTGCTGTAACTAATTTGTTTATATTCCATNC 406
                                                                                  

consensus_8586#3      ------------------------------------------------------------
consensus_8586#4      CTACCACT-CGTTTCGTATA---GTGTGCTAGA-ATTAATCTCAT-ATCCATCGAAATGT 400
consensus_8586#1      CTAACCCG-CGAGG-AAATT---GTGCGCATGA-AGCAGCGGCGTCGTACGCTGAAAAAT 577
consensus_8586#0      TCAGTACTTCGATTAGTATAATTGNATATTGAACATTAAAATAATAAAGTAACATTTTAT 896
consensus_8586#2      TCAGTACTTCGATTAGTATAATTGTATATTGAACATTAAANTAATAAAGTAACATNTNAT 466
                                                                                  

consensus_8586#3      ------------------------------------------------------------
consensus_8586#4      GTACCCCTTTCTGT-ATTTGTAGTCA---------------------------------- 425
consensus_8586#1      CGAGGATATGCCGCCAGCTGCCGCATAAAGCGCATCGAGCAGAAGGATGAACTGGAGACG 637
consensus_8586#0      ATTCTAAAAAAAA----------------------------------------------- 909
consensus_8586#2      ATTCTACACTCGCTTGCACGTGGCCATGCTTCGACACTACGTGCAATTGTAGATCAATTT 526
                                                                                  

consensus_8586#3      ------------------------------------------------------------
consensus_8586#4      ------------------------------------------------------------
consensus_8586#1      GAAAAATCACAAGAATGGCGGGATATGGAGCTGATGCACGAGGAAACCGGTCGATTGCAG 697
consensus_8586#0      ------------------------------------------------------------
consensus_8586#2      GAATATTCTGA------------------------------------------------- 537
                                                                                  

consensus_8586#3      ---------------
consensus_8586#4      ---------------
consensus_8586#1      GAAGAGAACGATTCG 712
consensus_8586#0      ---------------
consensus_8586#2      ---------------
                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)