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Anopheles gambiae
cluster # 8590 cluster # 8590       Sequences # 11       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8590#0 length = 902 sequences # 7  
consensus_8590#1 length = 815 sequences # 2  
consensus_8590#2 length = 626 sequences # 1  
consensus_8590#3 length = 565 sequences # 1  

consensusID : consensus_8590#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 902
fasta sequence
                              [AGCAAGAATCGGC-CGAGGGTGGATGTTGGCAATCGCTACGAAA-CGGTGGTGATGATTACAAATTAATTTCAAAAACTGTCCTCATTACCTATTTCGTTATCGTTTGCCCGATCCCGACCACCCAGTGCCATGTTTTGGCACATA-TTTTTACTCGTTTCGGGCGTAAAGCTGCTGTTCATCCCAGCCTACCGGTCCACCGACTTTGAGGTACACCGGAACTGGCTGGCAATCAC-GCACAGCTT-GCCGCTCTCGCGATGGTACTACGAG-AAAACGAGCGAATGGACGCTGGACTATCCGCCCTTCTTTGCCTACTTCGAGTGGCTACTGTCACAGGTGGCCAAATCGTTCGACCCGCGGATGCTGGACGTGAAGAATCTCAACTACGCTTCCGAGCAGACGATCG-TTTTCCAGCGCTTCTCGGTCATCGTGACCGACGTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGCACTAAGCGCCGGCAATGTCAATCCGACCCGCTCCTTGCTCATCGGTGGCGCGCTGCTGCTCGGTAACGCCGGCCTGCTGATGGTGGACCACATCCACTTTCAGTACAATGGATTCCTGTTCGGCGTGCTGCTTCTCAGCATCGGTGCACTGATGGAAAACCGACCCCTGCAGTCGGCCCT-GT-TGTTTGC-GGTGCTGCTTAACCTGAAGCACA-TCTTCATGTACGTCGCCCCT-GTTTATGTTGTTTATTTGCTACGGTTTTATTGC--TTGCG-CGAATTTTACCCGGTACGGGTCCAGGGCCGGACGGGTTAAAAACTAAATTCGAAACTTGGGTTCACCAATCGTGCTTGGGCNGTTGTGTTTTACCTATTCGGTCAGGGTCCAAATTCTTACGAAGCANCATTTCCCACCAGGTCTTTTCCCNAACTGTT]

[+] EMBL BX468567             [  CAAGAATCGGC CGAGGGTGGATGTTGGCAATCGCTACGAAA CGGTGGTGATGATTACAAATTAATTTCAAAAACTGTCCTCATTACCTATTTCGTTATCGTTTGCCCGATCCCGACCACCCAGTGCCATGTTTTGGCACATA TTTTTACTCGTTTCGGGCGTAAAGCTGCTGTTCATCCCAGCCTACCGGTCCACCGACTTTGAGGTACACCGGAACTGGCTGGCAATCACGGCACAGTTTGGCCGCTCTCGCGATGGTACTACGAGAAAAACGAGCGAATGGACGCTGGACTATCCGCCCTTCTTTGCCTACTTCGAGTGGCTACTGTCACAGGTGGCCAAATCGTTCGACCCGCGGATGCTGGACGTGAAGAATCTCAACTACGCTTCCGAGCAGACGATCGTTTTTCCAGCGCTTCTCGGTCATCGTGACCGACGTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGCACTAAGCGCCGGCAATGTCAATCCGACCCGCTCCTTGCTCATCGGTGGCGCGCTGCTGCTCGGTAACGCCGGCCTGCTGATGGTGGACCACATCCACTTTCAGTACAATGGATTCCTGTTCGGCGTGCTGCTTCTCAGCATCGGTGCACTGATGGAAAAGCGACCCCTGCAGTCGGCCCT GT TGTTTGCGGGTGCTGCTTAACCTGAAGCACA TCTTCATGTACGTCGCCCCTGGTTTATG TGTTGATTTGCTACGGTTTAATTGCCTTTGCGCCGAATTTTACCCGGTACGGGTCCAGGGCCGGACGGGTTAAAAACTAAATTCGAAACTTGGGTTCACCAATCGTGCTTGGGCNGTTGTGTTTTACCTATTCGGTCAGGGTCCAAATTCTTACGAAGCANCATTTCCCACCAGGTCTTTTCCCNAACTGTT]
[+] EMBL BX468475             [aggcAGATTCGGCACGAGG  GG TGTTGGC ATCGCTACGAAA CGGTGGTGATGATTACAAATTAATTTCAAAAACTGTCCTCATTACCTATTTCGTTATCGTTTGCCCGATCCCGACCACCCAGTGCCATGTTTTGGCACATATTTTTTACTCGTTTCGGGCGTAAAGCTGCTGTTCATCCCAGCCTACCGGTCCACCGACTTTGAGGTACACCGGAACTGGCTGGCAATCAC GCACAGCTT GCCGCTCTCGCGATGGTACTACGAG AAAACGAGCGAATGGACGCTGGACTATCCGCCCTTCTTTGCCTACTTCGAGTGGCTACTGTCACAGGTGGCCAAATCGTTCGACCCGCGGATGCTGGACGTGAAGAATCTCAACTACGCTTCCGAGCAGACGATCG TTTTCCAGCGCTTCTCGGTCATCGTGACCGACGTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGCACTAAGCGCCGGCAATGTCAATCCGACCCGCTCCTTGCTCATCGGTGGCGCGCTGCTGCTCGGTAACGCCGGCCTGCTGATGGTGGACCACATCCACTTTCAGTACAATGGATTCCTGTTCGGCGTGCTGCTTCTCAGCATCGGTGCACTGATGGAAAACCGACCCCTGCAGTCGGCCCT GTCGGTTTGC GGTGCTGCTTAACCTGAAGCA                                                                                                                                                                                                                                ]
[+] EMBL BM637028             [                               ccgCGCTACGAAACCGGTGGTGATGATTACAAATTAATTTCAAAAACTGTCCTCATTACCTATTTCGTTATCGTTTGCCCGATCCCGACCACCCAGTGCCATGTTTTGGCACATA TTTTTACTCGTTTCGGGCGTAAAGCTGCTGTTCATCCCAGCCTACCGGTCCACCGACTTTGAGGTACACCGGAATTGGCTGGCAATCAC GCACAGCTT GCCGCTCTCGCGATGGTACTACGAG AAAACGAGCGAATGGACGCTGGACTATCCGCCCTTCTTTGCCTACTTCGAGTGGCTACTGTCACAGGTGGCCAAATCGTTCGACCCGCGGATGCTGGACGTGAAGAATCTCAACTACGCTTCCGAGCAGACGATCG TTTTCCAGCGCTTCTCGGTCATCGTGACCGACGTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGCACTAAGCGCCGGCAGTGTCAATCCGACCCGCTCCCTGCTCATCGGTGGCGCGCTGCTGCTCGGTAACGCCGGCCTGCTGATGGTGGACCACATCCACTTTCAGTACAATGGATTCCTGTTCGGCGTGCTGCTTCTCAGCATCGGTGCACTGATGGAAAACCGACCCCTGCAGTCGGCCCT GC TGTTTGC GGTG                                                                                                                                                                                                                                                 ]
[+] EMBL BX629058             [                                     TACGAAACCGGTGGTGATGATTACAAATTAATTTCAAAAACTGTCCTCATTACCTATTTCGTTATCGTTTGCCCGATCCCGACCACCCAGTGCCATGTTTTGGCACATA TTTTTACTCGTTTCGGGCGTAAAGCTGCTGTTCATCCCAGCCTACCGGTCCACCGACTTTGAGGTACACCGGAACTGGCTGGCAATCAC GCACAGCTT GCCGCTCTCGCGATGGTACTACGAG AAAACGAGCGAATGGACGCTGGACTATCCGCCCTTCTTTGCCTACTTCGAGTGGCTACTGTCACAGGTGGCCAAATCGTTCGACCCGCGGATGCTGGACGTGAAGAATCTCAACTACGCTTCCGAGCAGACGATCG TTTTCCAGCGCTTCTCGGTCATCGTGACCGACGTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGCACTAAGCGCCGGCAATGTCAATCCGACCCGCTCCTTGCTCATCGGTGGCGCGCTGCTGCTCGGTAACGCCGGCCTGCTGATGGTGGACCACATCCACTTTCAGTACAATGGATTCCTGTTCGGCGTGCTGCTTCTCAGCATCGGTGCACTGATGGAAAACCGACCCCTGCAGTCGGCCCT GT TGTTTGC GGTGCTGCTTAACCTGAAGCACA TCTTCAT                                                                                                                                                                                                                      ]
[+] EMBL BX627747             [                                      ACGAAACCGGTGGTGATGATTACAAATTAATTTCAAAAACTGTCCTCATTACCTATTTCGTTATCGTTTGCCCGATCCCGACCACCCAGTGCCATGTTTTGGCACATA TTTTTACTCGTTTCGGGCGTAAAGCTGCTGTTCATCCCAGCCTACCGGTCCACCGACTTTGAGGTACACCGGAACTGGCTGGCAATCAC GCACAGCTT GCCGCTCTCGCGATGGTACTACGAG AAAACGAGCGAATGGACGCTGGACTATCCGCCCTTCTTTGCCTACTTCGAGTGGCTACTGTCACAGGTGGCCAAATCGTTCGACCCGCGGATGCTGGACGTGAAGAATCTCAACTACGCTTCCGAGCAGACGATCG TTTTCCAGCGCTTCTCGGTCATCGTGACCGACGTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGCACTAAGCGCCGGCAATGTCAATCCGACCCGCTCCTTGCTCATCGGTGGCGCGCTGCTGCTCGGTAACGCCGGCCTGCTGATGGTGGACCACATCCACTTTCAGTACAATGGATTCCTGTTCGGCGTGCTGCTTCTCAGCATCGGTGCACTGATGGAAAACCGACCCCTGC                                                                                                                                                                                                                                                                           ]
[+] EMBL BX628649             [                                                  GTGATGATTACAAATTAATTTCAAAAACTGTCCTCATTACCTATTTCGTTATCGTTTGCCCGATCCCGACCACCCAGTGCCATGTTTTGGCACATA TTTTTACTCGTTTCGGGCGTAAAGCTGCTGTTCATCCCAGCCTACCGGTCCACCGACTTTGAGGTACACCGGAATTGGCTGGCAATCAC GCACAGCTT GCCGCTCTCGCGATGGTACTACGAG AAAACGAGCGAATGGACGCTGGACTATCCGCCCTTCTTTGCCTACTTCGAGTGGCTACTGTCACAGGTGGCCAAATCGTTCGACCCGCGGATGCTGGACGTGAAGAATCTCAACTACGCTTCCGAGCAGACGATCG TTTTCCAGCGCTTCTCGGTCATCGTGACCGACGTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGCACTAAGCGCCGGCAGTGTCAATCCGACCCGCTCCCTGCTCATCGGTGGCGCGCTGCTGCTCGGTAACGCCGGCCTGCTGATGGTGGACCACATCCACTTTCAGTACAATGGATTCCTGTTCGGCGTGCTGCTTCTCAGCATCGGTGCACTGATGGAAAACCGACCCCTGCAGTCGGCCCT GC TGTTTGC GGTGCTGCTTAACCTGAAGCACA TCTTCATGTACGTCGCCCCT GTTTATGTTGTTTATTTGCTACGGTTTTATTGC  TTGCG CG ATTTTACC  GT CGG  CC GGG CGG CGG  T AAAACTAA  TC AAACT  GG CCACC ATCGTGC TGGGC G TGTG TTTA CTA TCGTTC  GGTCCAtt                                             ]
[+] EMBL BM627296             [                                                              ccgTAATTTCAAAAACTGTCCTCATTACCTATTTCGTTATCGTTTGCCCGATCCCGACCACCCAGTGCCATGTTTTGGCACATA TTTTTACTCGTTTCGGGCGTAAAGCTGCTGTTCATCCCAGCCTACCGGTCCACCGACTTTGAGGTACACCGGAATTGGCTGGCAATCAC GCACAGCTT GCCGCTCTCGCGATGGTACTACGAG AAAACGAGCGAATGGACGCTGGACTATCCGCCCTTCTTTGCCTACTTCGAGTGGCTACTGTCACAGGTGGCCAAATCGTTCGACCCGCGGATGCTGGACGTGAAGAATCTCAACTACGCTTCCGAGCAGACGATCG TTTTCCAGCGCTTCTCGGTCATCGTGACCGACGTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGCACTAAGCGCCGGCAGTGTCAATCCGACCCGCTCCCTGCTCATCGGTGGCGCGCTGCTGCTCGGTAACGCCGGCCTGCTGATGGTGGACCACATCCACTTTCAGTACAATGGATTCCTGTTCGGCGTGCTGCTTCTCAGCATCGGTGCACTGATGGAAAACCGACCCCTGCAGTCGGCCCTGGC TGTTTGC GGTGCTGCTTAACCTGAAGCACATTCTTCATGTACGTCGCCCCT GTTTATGTTGTTTATTTGCTACGGGTTTATTGC  TTGCG CGATTT                                                                                                                                                         ]


>consensus_8590#0 AGCAAGAATCGGCCGAGGGTGGATGTTGGCAATCGCTACGAAACGGTGGTGATGATTACA AATTAATTTCAAAAACTGTCCTCATTACCTATTTCGTTATCGTTTGCCCGATCCCGACCA CCCAGTGCCATGTTTTGGCACATATTTTTACTCGTTTCGGGCGTAAAGCTGCTGTTCATC CCAGCCTACCGGTCCACCGACTTTGAGGTACACCGGAACTGGCTGGCAATCACGCACAGC TTGCCGCTCTCGCGATGGTACTACGAGAAAACGAGCGAATGGACGCTGGACTATCCGCCC TTCTTTGCCTACTTCGAGTGGCTACTGTCACAGGTGGCCAAATCGTTCGACCCGCGGATG CTGGACGTGAAGAATCTCAACTACGCTTCCGAGCAGACGATCGTTTTCCAGCGCTTCTCG GTCATCGTGACCGACGTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGCACTAAGC GCCGGCAATGTCAATCCGACCCGCTCCTTGCTCATCGGTGGCGCGCTGCTGCTCGGTAAC GCCGGCCTGCTGATGGTGGACCACATCCACTTTCAGTACAATGGATTCCTGTTCGGCGTG CTGCTTCTCAGCATCGGTGCACTGATGGAAAACCGACCCCTGCAGTCGGCCCTGTTGTTT GCGGTGCTGCTTAACCTGAAGCACATCTTCATGTACGTCGCCCCTGTTTATGTTGTTTAT TTGCTACGGTTTTATTGCTTGCGCGAATTTTACCCGGTACGGGTCCAGGGCCGGACGGGT TAAAAACTAAATTCGAAACTTGGGTTCACCAATCGTGCTTGGGCNGTTGTGTTTTACCTA TTCGGTCAGGGTCCAAATTCTTACGAAGCANCATTTCCCACCAGGTCTTTTCCCNAACTG TT



consensusID : consensus_8590#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 815
fasta sequence
                              [CCCGAGGTNTTTAAATTCCGGCCCTACGAAACGGTGGTGATGATTACAAATTATTTCAAAAACTGTCCTCATTACCTATTTCGTTATCGTTTGCCCGATCCCGACCACCCAGTGCCATG-TTTGGCACATATTTTTACTCGTTTCGGGCGTAAAGCTGCTGTTCATCCCAGCCTACCGGTCCACCGACTTTGAGGTACACCGGAACTGGCTGGCAATCACGCACAGCTTTGCCGCTCTCGCGATGGTACTACGAGAAAACGAGCGAATGGACGCTGGACTATCCGCCCTTCTTTGCCTACTTCGAGTGGCTAGTGTCACATNNTGGCAAATCGTTCGACCCGGGATGCTGGACGTGAAGAATCTCAACTACGCTTCCGAGCAGACGATCGTTTTCCAGCGCTCTCTCGGTCATACGTGACCGACGTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGCCACTAAGCGCCGGGCACAATGTACAATCCGNACCCGGTCCTTTGGTACATACGGTGGCCGCGCTGATGGTCGGAAAGCGGGCTGNTTGATGGTGGGACCACAATTCCAAGTTTCCAGTACAAATGGGATTCCTGTTCGGGACGNNTGCATGCGTTCTCAGCATCACGGGTGGCACTGGACTGGGAAAAAACCGAACCCCTGTGAAGTCGGACCCTGANATGATATTGAGAGACGAGNAGCATAAAAACCTGAAAGAACAATACTNTCAATGTAACAGTNGGACCCCCGGGNAATAGGNTCAGAGACAAANAATAGANNACAGGGATAAATAGGGTAGCGCCGACATTTACAACC]

[+] EMBL AL695074             [CCCGAGGTNTTTAAATTCCGGCCCTACGAAACGGTGGTGATGATTACAAATTATTTCAAAAACTGTCCTCATTACCTATTTCGTTATCGTTTGCCCGATCCCGACCACCCAGTGCCATG TTTGGCACATATTTTTACTCGTTTCGGGCGTAAAGCTGCTGTTCATCCCAGCCTACCGGTCCACCGACTTTGAGGTACACCGGAACTGGCTGGCAATCACGCACAGCTTTGCCGCTCTCGCGATGGTACTACGAGAAAACGAGCGAATGGACGCTGGACTATCCGCCCTTCTTTGCCTACTTCGAGTGGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AL696530             [                                                                   tanATTA CTATTTCGTTATCGTTTG CCGATCCCG TCA CCAGTGCCATGTTTTGGCACATATTTTTACTCGTTTCGGGCGTAAAGCTGCTGTTCATCCCAGCCTACCGGTCCACCGACTTTGAGGTACACCGGAACTGGCTGGCAATCACGCACAGC TTGCCG TCTCGCGATGGTACTACGAGAAAACGAGCGAATGGACGCTGGACTATCCG CCTTCTTTG CTACTTCGAGTGGGTNGTGTCACATNNTGGCAAATCGTTCGACCCGGGATGCTGGACGTGAAGAATCTCAACTACGCTTCCGAGCAGACGATCGTTTTCCAGCGCTCTCTCGGTCATACGTGACCGACGTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGCCACTAAGCGCCGGGCACAATGTACAATCCGNACCCGGTCCTTTGGTACATACGGTGGCCGCGCTGATGGTCGGAAAGCGGGCTGNTTGATGGTGGGACCACAATTCCAAGTTTCCAGTACAAATGGGATTCCTGTTCGGGACGNNTGCATGCGTTCTCAGCATCACGGGTGGCACTGGACTGGGAAAAAACCGAACCCCTGTGAAGTCGGACCCTGANATGATATTGAGAGACGAGNAGCATAAAAACCTGAAAGAACAATACTNTCAATGTAACAGTNGGACCCCCGGGNAATAGGNTCAGAGACAAANAATAGANNACAGGGATAAATAGGGTAGCGCCGACATTTACAACC]


>consensus_8590#1 CCCGAGGTNTTTAAATTCCGGCCCTACGAAACGGTGGTGATGATTACAAATTATTTCAAA AACTGTCCTCATTACCTATTTCGTTATCGTTTGCCCGATCCCGACCACCCAGTGCCATGT TTGGCACATATTTTTACTCGTTTCGGGCGTAAAGCTGCTGTTCATCCCAGCCTACCGGTC CACCGACTTTGAGGTACACCGGAACTGGCTGGCAATCACGCACAGCTTTGCCGCTCTCGC GATGGTACTACGAGAAAACGAGCGAATGGACGCTGGACTATCCGCCCTTCTTTGCCTACT TCGAGTGGCTAGTGTCACATNNTGGCAAATCGTTCGACCCGGGATGCTGGACGTGAAGAA TCTCAACTACGCTTCCGAGCAGACGATCGTTTTCCAGCGCTCTCTCGGTCATACGTGACC GACGTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGCCACTAAGCGCCGGGCACAA TGTACAATCCGNACCCGGTCCTTTGGTACATACGGTGGCCGCGCTGATGGTCGGAAAGCG GGCTGNTTGATGGTGGGACCACAATTCCAAGTTTCCAGTACAAATGGGATTCCTGTTCGG GACGNNTGCATGCGTTCTCAGCATCACGGGTGGCACTGGACTGGGAAAAAACCGAACCCC TGTGAAGTCGGACCCTGANATGATATTGAGAGACGAGNAGCATAAAAACCTGAAAGAACA ATACTNTCAATGTAACAGTNGGACCCCCGGGNAATAGGNTCAGAGACAAANAATAGANNA CAGGGATAAATAGGGTAGCGCCGACATTTACAACC



consensusID : consensus_8590#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 626
fasta sequence
                              [GCAGAATCNNGCACGAGGATTAATTACAAAAAGCTGTCCTCANTTACCTATTTCGTTATCGTGTTGCCCGATCCCGAGCCACCCAGTGTCCATGTNNTATGGACACATATAATTTAACTCAGTTTCGGGCGTAAAGCTGCTGTTCAGTCCCAGGCCTATCCGGTCCATCGCGACCTTTGAGAGTAGCACCGGAACTGGGCTGGCAATCACGCACAGACTTGCCGCTCTCGGCGATGGTACTACGAGAAAACGAGCGAATGGACGCTGGACTATCCGACGCTCGTTGCTATGTGNCCTACTTCGAGTGGTCTACTGTACACAGGTGGCCAAATCGTTCGAGCCACGCGGATGCTTGGACGTGAAGAATCTACAACTGACGACTGTCCGAGACAGACGATCGTTTTCCAGCAGCTGTCTCGGTCATCGTGACCGACGTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGCACTAAGCGCCGGCAATGTCAATCCGACCAGCTCCTTGNTCATCGGTGGCGCGCTGNTGCTCGGGTNNACGCCGGCGCTGCGTGGATGGTGGACCACATCCACGTTTACAGGTACAATGGGATTCCCTGTTACGGCGTAGCATGNTTACTCAGNC]

[+] EMBL BX468006             [GCAGAATCNNGCACGAGGATTAATTACAAAAAGCTGTCCTCANTTACCTATTTCGTTATCGTGTTGCCCGATCCCGAGCCACCCAGTGTCCATGTNNTATGGACACATATAATTTAACTCAGTTTCGGGCGTAAAGCTGCTGTTCAGTCCCAGGCCTATCCGGTCCATCGCGACCTTTGAGAGTAGCACCGGAACTGGGCTGGCAATCACGCACAGACTTGCCGCTCTCGGCGATGGTACTACGAGAAAACGAGCGAATGGACGCTGGACTATCCGACGCTCGTTGCTATGTGNCCTACTTCGAGTGGTCTACTGTACACAGGTGGCCAAATCGTTCGAGCCACGCGGATGCTTGGACGTGAAGAATCTACAACTGACGACTGTCCGAGACAGACGATCGTTTTCCAGCAGCTGTCTCGGTCATCGTGACCGACGTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGCACTAAGCGCCGGCAATGTCAATCCGACCAGCTCCTTGNTCATCGGTGGCGCGCTGNTGCTCGGGTNNACGCCGGCGCTGCGTGGATGGTGGACCACATCCACGTTTACAGGTACAATGGGATTCCCTGTTACGGCGTAGCATGNTTACTCAGNC]


>consensus_8590#2 GCAGAATCNNGCACGAGGATTAATTACAAAAAGCTGTCCTCANTTACCTATTTCGTTATC GTGTTGCCCGATCCCGAGCCACCCAGTGTCCATGTNNTATGGACACATATAATTTAACTC AGTTTCGGGCGTAAAGCTGCTGTTCAGTCCCAGGCCTATCCGGTCCATCGCGACCTTTGA GAGTAGCACCGGAACTGGGCTGGCAATCACGCACAGACTTGCCGCTCTCGGCGATGGTAC TACGAGAAAACGAGCGAATGGACGCTGGACTATCCGACGCTCGTTGCTATGTGNCCTACT TCGAGTGGTCTACTGTACACAGGTGGCCAAATCGTTCGAGCCACGCGGATGCTTGGACGT GAAGAATCTACAACTGACGACTGTCCGAGACAGACGATCGTTTTCCAGCAGCTGTCTCGG TCATCGTGACCGACGTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGCACTAAGCG CCGGCAATGTCAATCCGACCAGCTCCTTGNTCATCGGTGGCGCGCTGNTGCTCGGGTNNA CGCCGGCGCTGCGTGGATGGTGGACCACATCCACGTTTACAGGTACAATGGGATTCCCTG TTACGGCGTAGCATGNTTACTCAGNC



consensusID : consensus_8590#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 565
fasta sequence
                              [CAAGAATTGCCCGAGGTTATCACGACTTTGAGGTACACCGGAACTGGCTGGCAATCACGCACAGCTTGCCGCTCTCGCGATGGTACTACGAGAAAACGAGCGAATGGACGCTGGACTATCCGCCCTTCTTTGCCTACTTCGAGTGGCTACTGTCACAGGTGGCCAAATCGTATCGACCGCGGATGCTGGACGTGAACGCAATCTCAACTACGCTTCCGAGCAGACGATCGTTTTACCAGCGCTATCTCGGTCATCTTTGACCGACGTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGCACTAAGCCGCCGGGCCGTGTCAATCCGACCGNTCCCCTGGCTCATCGGTGGCGCGCTGCTGCTCGGTAACTGCCGGTCTGCNTGATGGTGGACCACATCCACTTTCAGTACAATGGATTCCTGTTCGGCCGCTGCTGCTATCTCAGACCATCGGTGCACTGACTGGAAAACCGAACCCTGNCAGTCGGCCCTGGCTGTAATGCGGTGCTNGCCTNTAACCTGAAGCACATCTTCATGTACGTACGCCCCTGGTAATATAGTA]

[+] EMBL AL929830             [CAAGAATTGCCCGAGGTTATCACGACTTTGAGGTACACCGGAACTGGCTGGCAATCACGCACAGCTTGCCGCTCTCGCGATGGTACTACGAGAAAACGAGCGAATGGACGCTGGACTATCCGCCCTTCTTTGCCTACTTCGAGTGGCTACTGTCACAGGTGGCCAAATCGTATCGACCGCGGATGCTGGACGTGAACGCAATCTCAACTACGCTTCCGAGCAGACGATCGTTTTACCAGCGCTATCTCGGTCATCTTTGACCGACGTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGCACTAAGCCGCCGGGCCGTGTCAATCCGACCGNTCCCCTGGCTCATCGGTGGCGCGCTGCTGCTCGGTAACTGCCGGTCTGCNTGATGGTGGACCACATCCACTTTCAGTACAATGGATTCCTGTTCGGCCGCTGCTGCTATCTCAGACCATCGGTGCACTGACTGGAAAACCGAACCCTGNCAGTCGGCCCTGGCTGTAATGCGGTGCTNGCCTNTAACCTGAAGCACATCTTCATGTACGTACGCCCCTGGTAATATAGTA]


>consensus_8590#3 CAAGAATTGCCCGAGGTTATCACGACTTTGAGGTACACCGGAACTGGCTGGCAATCACGC ACAGCTTGCCGCTCTCGCGATGGTACTACGAGAAAACGAGCGAATGGACGCTGGACTATC CGCCCTTCTTTGCCTACTTCGAGTGGCTACTGTCACAGGTGGCCAAATCGTATCGACCGC GGATGCTGGACGTGAACGCAATCTCAACTACGCTTCCGAGCAGACGATCGTTTTACCAGC GCTATCTCGGTCATCTTTGACCGACGTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCG GGCACTAAGCCGCCGGGCCGTGTCAATCCGACCGNTCCCCTGGCTCATCGGTGGCGCGCT GCTGCTCGGTAACTGCCGGTCTGCNTGATGGTGGACCACATCCACTTTCAGTACAATGGA TTCCTGTTCGGCCGCTGCTGCTATCTCAGACCATCGGTGCACTGACTGGAAAACCGAACC CTGNCAGTCGGCCCTGGCTGTAATGCGGTGCTNGCCTNTAACCTGAAGCACATCTTCATG TACGTACGCCCCTGGTAATATAGTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8590#0      AGCAAGAATCGGCCGAGGGTGGATGTTGGCAATCGCTACGAAACGGTGGTGATGATTACA 60
consensus_8590#3      ------------------------------------------------------------
consensus_8590#1      ------------CCCGAGGTNTTTAAATTCCGGCCCTACGAAACGGTGGTGATGATTACA 48
consensus_8590#2      -------------------------------------GCAGAATCNNGC--ACGAGGATT 21
                                                                                  

consensus_8590#0      AATTAATTTCAAAAACTGTCCTCATT-ACCTATTTCGTTATCGT-TTGCCCGATCCCGA- 117
consensus_8590#3      ------------------------------------------------------------
consensus_8590#1      AATTATTT-CAAAAACTGTCCTCATT-ACCTATTTCGTTATCGT-TTGCCCGATCCCGA- 104
consensus_8590#2      AATTAC---AAAAAGCTGTCCTCANTTACCTATTTCGTTATCGTGTTGCCCGATCCCGAG 78
                                                                                  

consensus_8590#0      CCACCCAGTG-CCATGTTTT---GGCACATAT--TTTTACTC-GTTTCGGGCGTAAAGCT 170
consensus_8590#3      -----------------------------------------------------------C 1
consensus_8590#1      CCACCCAGTG-CCATGTTT----GGCACATAT--TTTTACTC-GTTTCGGGCGTAAAGCT 156
consensus_8590#2      CCACCCAGTGTCCATGTNNTATGGACACATATAATTTAACTCAGTTTCGGGCGTAAAGCT 138
                                                                                  

consensus_8590#0      GCTGTTCA-TCCCAG-CCTA-CCGGTCCACCGA---CTTTGAG-GTA-CACCGGAACTGG 222
consensus_8590#3      AAGAATTG-CCCGAG-GTTA-TCA------CGA---CTTTGAG-GTA-CACCGGAACTGG 47
consensus_8590#1      GCTGTTCA-TCCCAG-CCTA-CCGGTCCACCGA---CTTTGAG-GTA-CACCGGAACTGG 208
consensus_8590#2      GCTGTTCAGTCCCAGGCCTATCCGGTCCATCGCGACCTTTGAGAGTAGCACCGGAACTGG 198
                           *    ** **   **  *       **    ******* *** ************

consensus_8590#0      -CTGGCAATCACGCACAG-CTTGCCGCTCTCG-CGATGGTACTACGAGAAAACGAGCGAA 279
consensus_8590#3      -CTGGCAATCACGCACAG-CTTGCCGCTCTCG-CGATGGTACTACGAGAAAACGAGCGAA 104
consensus_8590#1      -CTGGCAATCACGCACAGCTTTGCCGCTCTCG-CGATGGTACTACGAGAAAACGAGCGAA 266
consensus_8590#2      GCTGGCAATCACGCACAGACTTGCCGCTCTCGGCGATGGTACTACGAGAAAACGAGCGAA 258
                       *****************  ************ ***************************

consensus_8590#0      TGGACGCTGGACTATCCGCCCTTCTTTGC--------CTACTTCGAGTGG-CTACTGT-C 329
consensus_8590#3      TGGACGCTGGACTATCCGCCCTTCTTTGC--------CTACTTCGAGTGG-CTACTGT-C 154
consensus_8590#1      TGGACGCTGGACTATCCGCCCTTCTTTGC--------CTACTTCGAGTGG-CTAGTGT-C 316
consensus_8590#2      TGGACGCTGGACTATCCGACGCTCGTTGCTATGTGNCCTACTTCGAGTGGTCTACTGTAC 318
                      ****************** *  ** ****        ************* *** *** *

consensus_8590#0      ACAGGTGGCCAAATCGTTCGACCCGC--GGATGCT-GGACGTGAAG--AATCT-CAACT- 382
consensus_8590#3      ACAGGTGGCCAAATCGTATCGACCGC--GGATGCT-GGACGTGAACGCAATCT-CAACT- 209
consensus_8590#1      ACATNNTGGCAAATCGTTCGACCCG---GGATGCT-GGACGTGAAG--AATCT-CAACT- 368
consensus_8590#2      ACAGGTGGCCAAATCGTTCGAGCCACGCGGATGCTTGGACGTGAAG--AATCTACAACTG 376
                      ***    * ********     **    ******* *********   ***** ***** 

consensus_8590#0      ACGCTT--CCGAG-CAGACGATCGTTTT-CCAGC-GCT-TCTCGGTCATCGT-GACCGAC 435
consensus_8590#3      ACGCTT--CCGAG-CAGACGATCGTTTTACCAGC-GCTATCTCGGTCATCTTTGACCGAC 265
consensus_8590#1      ACGCTT--CCGAG-CAGACGATCGTTTT-CCAGC-GCTCTCTCGGTCATACGTGACCGAC 423
consensus_8590#2      ACGACTGTCCGAGACAGACGATCGTTTT-CCAGCAGCTGTCTCGGTCAT-CGTGACCGAC 434
                      ***  *  ***** ************** ***** *** **********    *******

consensus_8590#0      GTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGC-ACTAAGC-GCCGG---CAATG 490
consensus_8590#3      GTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGC-ACTAAGCCGCCGGG--CCGTG 322
consensus_8590#1      GTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGCCACTAAGC-GCCGGGCACAATG 482
consensus_8590#2      GTGATCTACGCGCTCGGTGTGCGCCGTTGCCTGCGGGC-ACTAAGC-GCCGG---CAATG 489
                      ************************************** ******* *****   *  **

consensus_8590#0      T-CAATCCGA--CCCGCTCCTTG-CTCAT-CGGTGGC-GCGCTGCTGCTCGGTAAC--GC 542
consensus_8590#3      T-CAATCCGA--CCGNTCCCCTGGCTCAT-CGGTGGC-GCGCTGCTGCTCGGTAACT-GC 376
consensus_8590#1      TACAATCCGNACCCGGTCCTTTGGTACATACGGTGGCCGCGCTGATGGTCGGAAAG---- 538
consensus_8590#2      T-CAATCCGA--CCAGCTCCTTGNT-CAT-CGGTGGC-GCGCTGNTGCTCGGGTNNACGC 543
                      * *******   **    *  **   *** ******* ****** ** ****        

consensus_8590#0      CGG-CCTGCT-GA-TGGTGGACCACA--TCCAC--TTTCAG-TACAATGG-ATTCCTGTT 593
consensus_8590#3      CGG-TCTGCNTGA-TGGTGGACCACA--TCCAC--TTTCAG-TACAATGG-ATTCCTGTT 428
consensus_8590#1      CGG-GCTGNTTGATGGTGGGACCACAATTCCAAGTTTCCAGTACAAATGGGATTCCTGTT 597
consensus_8590#2      CGGCGCTGCGTGGATGGTGGACCACA--TCCACGTTTACAGGTACAATGGGATTCCCTGT 601
                      ***  ***   *   *  ********  ****   ** ***    ***** *****   *

consensus_8590#0      C--GGCG--TGC-TGCT-TCTCAG--CATCGGTGCACTGA-TGGAAAACCGACCCCTGC- 643
consensus_8590#3      C--GGCCGCTGC-TGCTATCTCAGACCATCGGTGCACTGACTGGAAAACCGAACCCTGNC 485
consensus_8590#1      CGGGACGNNTGCATGCGTTCTCAGCATCACGGGTGGCACTGGACTGGGAAAAAACCGAAC 657
consensus_8590#2      TACGGCGTA-GCATGNTTACTCAGNC---------------------------------- 626
                         * *    ** **    *****                                    

consensus_8590#0      AGTCGGCCCTG-TTGTT-TGCGGTGCTG---CTTAACCTGAAGCACATCTTCATGTACGT 698
consensus_8590#3      AGTCGGCCCTGGCTGTAATGCGGTGCTNGCCTNTAACCTGAAGCACATCTTCATGTACGT 545
consensus_8590#1      CCCTGTGAAGTCGGACCCTGANATGATATTGAGAGACGAGNAGCATAAAAACCTGAAAGA 717
consensus_8590#2      ------------------------------------------------------------
                                                                                  

consensus_8590#0      -CGCCCCTGTTTATGTTGTTTATTTGCTACGGTTTTATTGCTTGCGCGAATTTTACCCGG 757
consensus_8590#3      ACGCCCCTGGTAATATAGTA---------------------------------------- 565
consensus_8590#1      ACAATACTNTCAATGTAACAGTNGGACCCCCGGGNAATAGGNTCAGAGACAAANAATAGA 777
consensus_8590#2      ------------------------------------------------------------
                                                                                  

consensus_8590#0      TACGGGTCCAGGGCCGGACGGGTTAAAAACTAAATTCGAAACTTGGGTTCACCAATCGTG 817
consensus_8590#3      ------------------------------------------------------------
consensus_8590#1      NNACAGGGATAAATAGGGTAGCGCCGACATTTACAACC---------------------- 815
consensus_8590#2      ------------------------------------------------------------
                                                                                  

consensus_8590#0      CTTGGGCNGTTGTGTTTTACCTATTCGGTCAGGGTCCAAATTCTTACGAAGCANCATTTC 877
consensus_8590#3      ------------------------------------------------------------
consensus_8590#1      ------------------------------------------------------------
consensus_8590#2      ------------------------------------------------------------
                                                                                  

consensus_8590#0      CCACCAGGTCTTTTCCCNAACTGTT 902
consensus_8590#3      -------------------------
consensus_8590#1      -------------------------
consensus_8590#2      -------------------------
                                               




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)