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Anopheles gambiae
cluster # 8601 cluster # 8601       Sequences # 11       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8601#0 length = 1006 sequences # 7  
consensus_8601#1 length = 893 sequences # 1  
consensus_8601#2 length = 738 sequences # 2  
consensus_8601#3 length = 481 sequences # 1  

consensusID : consensus_8601#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1006
fasta sequence
                              [TTTTTCAACAAACGCCACAACACATTATTTGTGTTTGCATACCTCCTCTTATATTTCCTCTATTTTTTTCTTCTTCCC-TTTTCATACAGATGGCTCTCAACATTGCTGTGCCGATGTCGGGCGTAGGTGACCTCCTGGAAGGATTCGGACTGCTTTCGCCGATTTCTCCCGTGAGCATCGACTTTCGCAGCAGCATCAAGAACCCGCTGTCACCAGTTGGTAGCGAATCCAGCGGCGTTAGTTCGTTGGATTTGGAAGATATCAAGGTAAGGCATCAAGGCACCATCAACTGGTTTCAGTTGTCGGTCCAGCTCGTTGGCTTCAATCGTACATGAACGCATTTTTCAGTCGCATGCGACGGGCCATTCTTGCTCGCTGCAAGATGACTGCTGCGCTGGTGCAAGCAAGATATGGTTCACAAGGTCCACACGGTCCGCATGGACTGCAAGGCACACATGGTCCGGATGGTCCACATGGACCACATGGTATGCATGGTCCACAAGGTCCACATGGTCCACAGGGTCCACATGGTCCGCAAGGTCCACAAGGTCCACATGGTCCACATGGTCCGCACGGCTCACAAGGTCCACATGGTCCACATGGTCCGCAAGGTCCGCACGGTCCACATGGTCCGCGGTAACTAGTACAGCACATGCTCGGCGAACACAATCCCGCGGCACCGCACACGTAATCGCAACAGCCCGGATTACAGCTCATCTTCCCCAAGGGCGGCAAAGTCGCAGGTCACGACAATTTTTAGCTCGTATGTACGGGCAGATGCAGCTCGGCGCTGGACAGCCGTATCCGCAGCAGGAACAGTTGCACGCGTACGCTCCCGGACTGCAACAATAGGCCAAGGGGTAGCAGCAGCTGCTTGAAGGAACTGGACAGACCATTTTATAGAAACACAGTTC-GGGGGGTGAAGAAGTTGTACGAAAAATTTCGGGATCACTTGCTAATTTGGAAAACACGTCTAATAGGTTTGACTCTTTCGGCGAGAATCCAG]

[+] EMBL CNS09PQ0             [TTTTTCAACAAACGCCACAACACATTATTTGTGTTTGCATACCTCCTCTTATATTTCCTCTATTTTTTTCTTCTTCCC TTTTCATACAGATGGCTCTCAACATTGCTGTGCCGATGTCGGGCGTAGGTGACCTCCTGGAAGGATTCGGACTGCTTTCGCCGATTTCTCCCGTGAGCATCGACTTTCGCAGCAGCATCAAGAACCCGCTGTCACCAGTTGGTAGCGAATCCAGCGGCGTTAGTTCGTTGGATTTGGAAGATATCAAGGTAAGGCATCAAGGCACCATCAACTGGTTTCAGTTGTCGGTCCAGCTCGTTGGCTTCAATCGTACATGAACGCATTTTTCAGTCGCATGCGACGGGCCATTCTTGCTCGCTGCAAGATGACTGCTGCGCTGGTGCAAGCAAGAAATGGTTCACAAGGTCCACACGGTCCGCATGGACTGCAAGGCACACATGGTCCGGATGGTCCACATGGACCACATGGTATGCATGGTCCACAAGGTCCACATGGTCCACAGGGTCCACATGGTCCGCAAGGTCCACAAGGTCCACATGGTCCACATGGTCCGCACGGCTCACAAGGTCCACATGGTCCACATGGTCCGCAAGGTCCGCACGGTCCACATGGTCCGCGGTAACTAGTACAGCACATGCTCGGCGAACACAATCCCGCGGCACCGCACACGTAATCGCAACAGCCCGGATTACAGCTCATCTTCCCCAAGGGCGGCAAAGTCGCAGGTCACGACAATTTTTAGCTCGTATGTACGGGCAGATGCAGCTCGGCGCTGGACAGCCGTATCCGCAGCAGGAACAGTTGCACGCGTACGCTCCCGGACTGCAACAATAGGCCAAGGGGTAGCAGCAGCTGCTTGAAGGAACTGGACAGACCATTTTATAGAAACACAGTTCGGGGGGGTGAAGAAGTTGTACGAAAAATTTCGGGATCACTTGCTAATTTGGTAAACA                                    ]
[+] EMBL CNS09M5E             [              atACAACACATTATTTTTGTTTGCATACCTCCTCTTATATTTCCTCTATTTTTTTCTTCTTCCC TTTTCATACAGATGGCTCTCAACATTGCTGTGCCGATGTCGGGCGTAGGTGACCTCCTGGAAGGATTCGGACTGCTTTCGCCGATTTCTCCCGTGAGCATCGACTTTCGCAGCAGCATCAAGAACCCGCTGTCACCAGTTGGTAGCGAATCCAGCGGCGTTAGTTCGTTGGATTTGGAAGATATCAAGGTAAGGCATCAAGGCACCATCAACTGGTTTCAGTTGTCGGTCCAGCTCGTTGGCTTCAATCGTACATGAACGCATTTTTCAGTCGCATGCGACGGGCCATTCTTGCTCGCTGCAAGATGACTGCTGCGCTGGTGCAAGCAAGATATGGTTCACAAGGTCCACACGGTCCGCATGGACTGCAAGGCACACATGGTCCGGATGGTCCACATGGACCACATGGTATGCATGGTCCACAAGGTCCACATGGTCCACAGGGTCCACATGGTCCGCAAGGGCCACAAGGTCCACATGGTCCACATGGTCCGCACGGCTCACAAGGTCCACATGGTCCACATGGTCCGCAAGGGCCGCACGGTCCACATGGTCCGCGGTAACTAGTACAGCACATGCTCGGCGAACACAA                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CNS09PPZ             [                                                TTATATTTCCTCTATTTTTTTCTTCTTCCCTTTTTCATACAGATGGCTCTCAACATTGCTGTGCCGATGTCGGGCGTAGGTGACCTCCTGGAAGGATTCGCACTGCTTTCGCCGATTTCTCCCGTGAGCATCGACTTTCGCAGCAGCATCAAGAACCCGCTGTCACCAGTTGGTAGCGAATCCAGCGGCGTTAGTTCGTTGGATTTGGAAGATATCAAGGTAAGGCATCAAGGCACCATCAACTGGTTTCAGTTGTCGGTCCAGCTCGTTGGCTTCAATCGTACATGAACGCATTTTTCAGTCGCATGCGACGGGCCATTCTTGCTCGCTGCAAGATGACTG TGCGCTGGTGCAAGCAAGATATGGTTCACAAGGTCCACACGGTCCGCATGGACTGCAAGGCACACATGGTCCGGATGGTCCACATGGACCACATGGTATGCATGGTCCACAAGGTCCACATGGTCCACAGGGTCCACATGGTCCGCAAGGTCCACAAGGTCCACATGGTCCACATGGTCCGCACGGCTCACAAGGTCCACATGGTCCACATGGTCCGCAAGGTCCGCACGGTCCACATGGTCCGCGGTAACTAGTACAGCACATGCTCGGCGAACACAATCCCGCGGCACCGCACACGTAATCGCAACAGCCCGGATTACAGCTCATCTTCCCCAAGGGCGGCAAAGTCGCAGGTCACGACAATTTTTAGCTCGTATGTACGGGCAGATGCAGCTCGGCGCTGGACAGCCGTATCCGCAGCAGGAACAGTTGCACGCGTACGCTCCCGGACTGCAACAATAGGCCAAGGGGTAGCAGCAGCTGCTTGAAGGAACTGGACAGACCATTTTATAGAAACACAGTTC GGGGGGTGAAGAAGTTGTACGAAAAATTTCGGGATCACTTGCTAATTTGGAAAACACGTCTAATAGGTTTGACTCTTTCGGCGAGAAT    ]
[-] EMBL BM600399             [                                                                                                                                                                                                                                                                                                                                                     TTTTTCAGTCGCATGCGACGGGCCATTCTTGCTCGCTGCAAGATGACTGCTGCGCTGGTGCAAGCAAGATATGGTTCACAAGGTCCACACGGTCCGCATGGACTGCAAGGCACACATGCTCCGGATGGTCCACATGGACCACATGGTATGCATGGTCCACAAGGTCCACATGGTCCACAGGGTCCACATGGTCCGCAAGGTCCACAAGGTCCACATGGTCCACATGGTC         CACATGGACCACATGGTCCGCAAGGTCCGCACGGTCCACATGGTCCACATGGTCCGCGGTAACTAGTACAGCACATGCTCGGCGAACACAATCCCGCGGCACCGCACACGTAATCGCAACAGCCCGGATTACAGCTCATCTTCCCCAAGGGCGGCAAAGTCGCAGGTCACGACAATTTTTAGCTCGTATGTACGGGCAGATGCAGCTCGGCGCTGGACAGCCGTATCCGCAGCAGGAACAGTTGCACGCGTACGCTCCCGGACTGCAACAATAGGCCAAGGGATAGCAGCAGCTGCTTGAAGGAACTGGACAGACCATTTTATAGAAACACAGTTC GGGGGGTGAAGAAGTTGTACGAAAAATTTCGGGATCACTTGCTAATTTGGAAAACACGTCTAATAGGTTcgg                    ]
[-] EMBL CNS09M5D             [                                                                                                                                                                                                                                                                                                                                                                                                              GTGCAAGCAAGATATGGTTCACAAGGTCCACCCGGTCCGCATGGACTGCAAGGCACACATGGTCCGGATGGTCCACATGGACCACATGGTATGCATGGTCCACAAGGTCCACATGGTCCACAGGGTCCACATGGTCCGCAAGGTCCACAAGGTCCACATGGTCCACATGGTCCGCACGGCTCACAAGGTCCACATGGTCCACATGGTCCGCAAGGTCCGCACGGTCCACATGGTCCGCGGTAACTAGTACAGCACATGCTCGGCGAACACAATCCCGCGGCACCGCACACGTAATCGCAACAGCCCGGATTACAGCTCATCTTCCCCAAGGGCGGCAAAGTCGCAGGTCACGACAATTTTTAGCTCGTATGTACGGGCAGATGCAGCTCGGCGCTGGACAGCCGTATCCGCAGCAGGAACAGTTGCACGCGTACGCTCCCGGACTGCAACAATAGGCCAAGGGGTAGCAGCAGCTGCTTGAAGGAACTGGACAGACCATTTTATAGAAACACAGTTC GGGGGGTGAAGAAGTTGTACGAAAAATTTCGGGATCACTTGCTAATTTGGAAAACAC                                   ]
[-] EMBL BM606574             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ggtcCACATGGACCACATGGTCCGCAAGGTCCGCACGGTCCACATGGTCCACATGGTCCGCGGTAAGTAGTACAGCACATGCTCGGGGAACACAATCCCGCGGCACCGCACACGTAATCGCAACAGCCCGGATTACAGCTCATATTCCCCAAGGGCGGCAAAGTGGCAGGTCAAGACAATTTTTAGGTCGTATGTACGGGCAGATGCAGg                                                                                                                                                                                                                               ]
[-] EMBL CNS09QRF             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGAACTGGACAGACCATTTTATAGAAACACAGTTC GGGGGGTGAAGAAGTTGTACGAAAAATTTCGGGATCACTTGCTAATTTGGAAAACACGTCTAATAGGTTTGACTCTTTCGTTTAGAATCCAG]


>consensus_8601#0 TTTTTCAACAAACGCCACAACACATTATTTGTGTTTGCATACCTCCTCTTATATTTCCTC TATTTTTTTCTTCTTCCCTTTTCATACAGATGGCTCTCAACATTGCTGTGCCGATGTCGG GCGTAGGTGACCTCCTGGAAGGATTCGGACTGCTTTCGCCGATTTCTCCCGTGAGCATCG ACTTTCGCAGCAGCATCAAGAACCCGCTGTCACCAGTTGGTAGCGAATCCAGCGGCGTTA GTTCGTTGGATTTGGAAGATATCAAGGTAAGGCATCAAGGCACCATCAACTGGTTTCAGT TGTCGGTCCAGCTCGTTGGCTTCAATCGTACATGAACGCATTTTTCAGTCGCATGCGACG GGCCATTCTTGCTCGCTGCAAGATGACTGCTGCGCTGGTGCAAGCAAGATATGGTTCACA AGGTCCACACGGTCCGCATGGACTGCAAGGCACACATGGTCCGGATGGTCCACATGGACC ACATGGTATGCATGGTCCACAAGGTCCACATGGTCCACAGGGTCCACATGGTCCGCAAGG TCCACAAGGTCCACATGGTCCACATGGTCCGCACGGCTCACAAGGTCCACATGGTCCACA TGGTCCGCAAGGTCCGCACGGTCCACATGGTCCGCGGTAACTAGTACAGCACATGCTCGG CGAACACAATCCCGCGGCACCGCACACGTAATCGCAACAGCCCGGATTACAGCTCATCTT CCCCAAGGGCGGCAAAGTCGCAGGTCACGACAATTTTTAGCTCGTATGTACGGGCAGATG CAGCTCGGCGCTGGACAGCCGTATCCGCAGCAGGAACAGTTGCACGCGTACGCTCCCGGA CTGCAACAATAGGCCAAGGGGTAGCAGCAGCTGCTTGAAGGAACTGGACAGACCATTTTA TAGAAACACAGTTCGGGGGGTGAAGAAGTTGTACGAAAAATTTCGGGATCACTTGCTAAT TTGGAAAACACGTCTAATAGGTTTGACTCTTTCGGCGAGAATCCAG



consensusID : consensus_8601#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 893
fasta sequence
                              [TTTTTTTAAAAGAATGTTTTCAACAAACCATACAACACATTATTTGTGTTTGCATACCCCCCCTTATATTTCCCCTATTTTTTTCTTCTTCCCTTTTCATACGGATGGCTCTCAACATTGCTGTGCCGATGTCGGGCGTAGGTGACCTCCTGGAAGGATTCGCAGCAGCATCAAGAACCCGCTGTCACCAGTTGGTAGCGAATCCAGCGGCGTTAGTTCGTTGGATTTGGAAGATATCAAGGTAAGGCATCAAGGCACCATCAACTGGTTTCAGTTGTCGGTCCAGCTCGTTGGCTTCAATCGTACATGAACGCATTTTTCAGTCGCATGCGACGGGCCATTCTTGCTCGCTGCAAGATGACTGCTGCGCTGGTGCAAGCAAGAAATGGTTCACAAGGTCCACACGGTCCGCATGGACTGCAAGGCACACATGGTCCGGATGGTCCACATGGACCACATGGTATGCATGGTCCACAAGGTCCACATGGTCCACAGGGTCCACATGGTCCGCAAGGTCCACAAGGTCCACATGGTCCACATGGTCCGCACGGCTCAAAAGGTCCACATGGTCCACATGGTCCGCAAGGTCCGCACGGTCCACATGGTCCGCGGTAACTAGTACAGCACATGCTCGGCGAACACAATCCCGCGGCACCGCACACGTAATCGCAACACCCCGGATTACAGCTCATCCTCCCCAAGGGCGGCAAAGTCGCAGGTCACGACAATTTTTAGCTCGTATGTACGGGCAGATGCAGCCCGGCGCTGGACAGCCGTATCCGCAGCAGGAACAGTTGCACGCGTACGCCCCCGGACTGCAACAATAGGCCAAGGGGTAGCAGCAGCTGCTTGAAGGAACTGGACAGACCATTTTATAGAAACACAATTCGGGG]

[+] EMBL CNS09QRG             [TTTTTTTAAAAGAATGTTTTCAACAAACCATACAACACATTATTTGTGTTTGCATACCCCCCCTTATATTTCCCCTATTTTTTTCTTCTTCCCTTTTCATACGGATGGCTCTCAACATTGCTGTGCCGATGTCGGGCGTAGGTGACCTCCTGGAAGGATTCGCAGCAGCATCAAGAACCCGCTGTCACCAGTTGGTAGCGAATCCAGCGGCGTTAGTTCGTTGGATTTGGAAGATATCAAGGTAAGGCATCAAGGCACCATCAACTGGTTTCAGTTGTCGGTCCAGCTCGTTGGCTTCAATCGTACATGAACGCATTTTTCAGTCGCATGCGACGGGCCATTCTTGCTCGCTGCAAGATGACTGCTGCGCTGGTGCAAGCAAGAAATGGTTCACAAGGTCCACACGGTCCGCATGGACTGCAAGGCACACATGGTCCGGATGGTCCACATGGACCACATGGTATGCATGGTCCACAAGGTCCACATGGTCCACAGGGTCCACATGGTCCGCAAGGTCCACAAGGTCCACATGGTCCACATGGTCCGCACGGCTCAAAAGGTCCACATGGTCCACATGGTCCGCAAGGTCCGCACGGTCCACATGGTCCGCGGTAACTAGTACAGCACATGCTCGGCGAACACAATCCCGCGGCACCGCACACGTAATCGCAACACCCCGGATTACAGCTCATCCTCCCCAAGGGCGGCAAAGTCGCAGGTCACGACAATTTTTAGCTCGTATGTACGGGCAGATGCAGCCCGGCGCTGGACAGCCGTATCCGCAGCAGGAACAGTTGCACGCGTACGCCCCCGGACTGCAACAATAGGCCAAGGGGTAGCAGCAGCTGCTTGAAGGAACTGGACAGACCATTTTATAGAAACACAATTCGGGG]


>consensus_8601#1 TTTTTTTAAAAGAATGTTTTCAACAAACCATACAACACATTATTTGTGTTTGCATACCCC CCCTTATATTTCCCCTATTTTTTTCTTCTTCCCTTTTCATACGGATGGCTCTCAACATTG CTGTGCCGATGTCGGGCGTAGGTGACCTCCTGGAAGGATTCGCAGCAGCATCAAGAACCC GCTGTCACCAGTTGGTAGCGAATCCAGCGGCGTTAGTTCGTTGGATTTGGAAGATATCAA GGTAAGGCATCAAGGCACCATCAACTGGTTTCAGTTGTCGGTCCAGCTCGTTGGCTTCAA TCGTACATGAACGCATTTTTCAGTCGCATGCGACGGGCCATTCTTGCTCGCTGCAAGATG ACTGCTGCGCTGGTGCAAGCAAGAAATGGTTCACAAGGTCCACACGGTCCGCATGGACTG CAAGGCACACATGGTCCGGATGGTCCACATGGACCACATGGTATGCATGGTCCACAAGGT CCACATGGTCCACAGGGTCCACATGGTCCGCAAGGTCCACAAGGTCCACATGGTCCACAT GGTCCGCACGGCTCAAAAGGTCCACATGGTCCACATGGTCCGCAAGGTCCGCACGGTCCA CATGGTCCGCGGTAACTAGTACAGCACATGCTCGGCGAACACAATCCCGCGGCACCGCAC ACGTAATCGCAACACCCCGGATTACAGCTCATCCTCCCCAAGGGCGGCAAAGTCGCAGGT CACGACAATTTTTAGCTCGTATGTACGGGCAGATGCAGCCCGGCGCTGGACAGCCGTATC CGCAGCAGGAACAGTTGCACGCGTACGCCCCCGGACTGCAACAATAGGCCAAGGGGTAGC AGCAGCTGCTTGAAGGAACTGGACAGACCATTTTATAGAAACACAATTCGGGG



consensusID : consensus_8601#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 738
fasta sequence
                              [CCGAGCGACGGAGACAGGAAAAATCATCTGTGATCAATTATAGCGCGTTCATTCTTCCACTGGTGTTTGCTGTTTTCTGCTCTGCCGCTCCGGTGCCTATCTCTGCTGTGTTCCTCTCCTAGTGTCCTAGTGTTTAAAGTAATTCGTGTATATAGAGCTGTTTGTGTGC--GTGAATTTGTGCGTGTGCTTCTTGAGCAACGATAGCGAGTCGTCGTGTGTGGCGCAGCGGCGGTGACGTTCCGAGTGTCAGCTACTGTTGTGTGTGTGTTTCCGTGCTTAAAACCCCGGAAGGACACTCTTAGGAATATTCCCCGGTACAGCCAGCAAAATCAAGTGTGGTAAAATTCCATCATCAGTACCACCAACACCACCACCATCACGAAACCAAATCCAACCTTCGCGCGCAGGAAGGAACTCTGGATTTGATCGAACTCCATCCGTCCGTACGAAAATTGGACACTCTGTCTATGATGGCTCTCAACATTGCTGTGCCGATGTCGGGCGTAGGTGACCTCCTGGAAGGATTCGGACTGCTTTCGCCGATTTCTCCCGTGAGCATCGACTTTCGCAGCAGCATCAAGAACCCGCTGTCACCAGTTGGTAGCGAATCCAGCGGCGTTAGTTCGTTGGATTTGGAAGATATCAAGAAACAAATGCCTTCATCGCCCACGTTACTCGACGACAACGAGGGAAGAAGGATCTTCATCGTCCGGCCGCCCGGAAAAGTCCTCTTCCAAC]

[+] EMBL BM611725             [CCGAGCGACGGAGACAGGAAAAATCATCTGTGATCAATTATAGCGCGTTCATTCTTCCACTGGTGTTTGCTGTTTTCTGCTCTGCCGCTCCGGTGCCTATCTCTGCTGTGTTCCTCTCCTAGTGTCCTAGTGTTTAAAGTAATTCGTGTATATAGAGCTGTTTGTGTGC  GTGAATTTGTGCGTGTGCTTCTTGAGCAACGATAGCGAGTCGTCGTGTGTGGCGCAGCGGCGGTGACGTTCCGAGTGTCAGCTACTGTTGTGTGTGTGTTTCCGTGCTTAAAACCCCGGAAGGACACTCTTAGGAATATTCCCCGGTACAGCCAGCAAAATCAAGTGTGGTAAAATTCCATCATCAGTACCACCAACACCACCACCATCACGAAACCAAATCCAACCTTCGCGCGCAGGAAGGAACTCTGGATTTGATCGAACTCCATCCGTCCGTACGAAAATTGGACACTCTGTCTATGATGGCTCTCAACATTGCTGTGCCGATGTCGGGCGTAGGTGACCTCCTGGAAGGATTCGGACTGCTTTCGCCGATTTCTCCCGTGAGCATCGACTTTCGCAGCAGCATCAAGAACCCGCTGTCACCAGTTGGTAGCGAATCCAGCGGCGTTAGTTCGTTGGATTTGGAAGATATCAAGAAACAAATGCCTTCATCGCCCACG                                                                   ]
[+] EMBL BM597125             [                                       ccgGCGCGTTCATTCTTCCACTGGTGTTTGCTGTTTTCTGCTCTGCCGCCTCGGTGCCTATCTCTGCTGTGTTCCTCTCCTAGTGTCCTAGTGTTTAAAGTAATTCGTGTATATAGAGCTGTTTGTGTGCGTGTGAATTTGTGCGTGTGCTTCTTGAGCAACGATAGCGAGTCGTCGTGTGTGGCGCAGCGGCGGTGACGTTCCGAGTGTCAGCTACTGTTGTGTGTGTGTTTCCGTGCTTAAAACCCCGGAAGGACACTCTTAGGAATATTCCCCGGTACAGCCAGCAAAATCAAGTGTGGTAAAATTCCATCATCAGTACCACCAACACCACCACCATCACGAAACCAAATCCAACCTTCGCGCGCAGGAAGGAACTCTGGATTTGATCGAACTCCATCCGTCCGTACGAAAATTGGACACTCTGTCTATGATGGCTCTCAACATTGCTGTGCCGATGTCGGGCGTAGGTGACCTCCTGGAAGGATTCGGACTGCTTTCGCCGATTTCTCCCGTGAGCATCGACTTTCGCAGCAGCATCAAGAACCCGCTGTCACCAGTTGGTAGCGAATCCAGCGGCGTAAGTTCGTTGGATTTGGAAGATATCAAGAAACAAATGCCTTCATCGCCCACGTTACTCGACGACAACGAGGGAAGAAGGATCTTCATCGTCCGGCCGCCCGGAAAAGTCCTCTTCCAAC]


>consensus_8601#2 CCGAGCGACGGAGACAGGAAAAATCATCTGTGATCAATTATAGCGCGTTCATTCTTCCAC TGGTGTTTGCTGTTTTCTGCTCTGCCGCTCCGGTGCCTATCTCTGCTGTGTTCCTCTCCT AGTGTCCTAGTGTTTAAAGTAATTCGTGTATATAGAGCTGTTTGTGTGCGTGAATTTGTG CGTGTGCTTCTTGAGCAACGATAGCGAGTCGTCGTGTGTGGCGCAGCGGCGGTGACGTTC CGAGTGTCAGCTACTGTTGTGTGTGTGTTTCCGTGCTTAAAACCCCGGAAGGACACTCTT AGGAATATTCCCCGGTACAGCCAGCAAAATCAAGTGTGGTAAAATTCCATCATCAGTACC ACCAACACCACCACCATCACGAAACCAAATCCAACCTTCGCGCGCAGGAAGGAACTCTGG ATTTGATCGAACTCCATCCGTCCGTACGAAAATTGGACACTCTGTCTATGATGGCTCTCA ACATTGCTGTGCCGATGTCGGGCGTAGGTGACCTCCTGGAAGGATTCGGACTGCTTTCGC CGATTTCTCCCGTGAGCATCGACTTTCGCAGCAGCATCAAGAACCCGCTGTCACCAGTTG GTAGCGAATCCAGCGGCGTTAGTTCGTTGGATTTGGAAGATATCAAGAAACAAATGCCTT CATCGCCCACGTTACTCGACGACAACGAGGGAAGAAGGATCTTCATCGTCCGGCCGCCCG GAAAAGTCCTCTTCCAAC



consensusID : consensus_8601#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 481
fasta sequence
                              [TGGTTCCCACAGGGTCCANCATGGTCCCCTCATACGNTCCACCAAGGTCCACATGGTCCACNTGGTCCTGCACGGCTCACAAGGTCCACATGGTCCACATGGTCCGCAAGGTCCGCACGGTCCACATGGTCCGCGGTAACCTAGTACAGCACATGCTCGGCGAACACAATCCCGCGGCACCGCACACGTAATCGCAACAGCCCGGATTACAGCTCATCTTCCCCAAGGGCGGCAAAGTCGCAGGTCACGACAATTTTTAGCTCGTATGTACGGGCAGATGCAGCTCGGCGCTGGACAGCCGTATCCGCAGCAGGAACAGTTGCACGCGTACGCTCCCGGACTGCAACAATAAGCCAAGGGATAGCAGCAGCTGCTTGAAGGAATAGAAACACAGTTCGGGGGGTGAAGAAGTTGTACGAAAATTTCGGGATCACTTGCTAATTTGGAAAACACGTCTATATNNCCTCGTGGCGATTCTGCC]

[-] EMBL BX466571             [TGGTTCCCACAGGGTCCANCATGGTCCCCTCATACGNTCCACCAAGGTCCACATGGTCCACNTGGTCCTGCACGGCTCACAAGGTCCACATGGTCCACATGGTCCGCAAGGTCCGCACGGTCCACATGGTCCGCGGTAACCTAGTACAGCACATGCTCGGCGAACACAATCCCGCGGCACCGCACACGTAATCGCAACAGCCCGGATTACAGCTCATCTTCCCCAAGGGCGGCAAAGTCGCAGGTCACGACAATTTTTAGCTCGTATGTACGGGCAGATGCAGCTCGGCGCTGGACAGCCGTATCCGCAGCAGGAACAGTTGCACGCGTACGCTCCCGGACTGCAACAATAAGCCAAGGGATAGCAGCAGCTGCTTGAAGGAATAGAAACACAGTTCGGGGGGTGAAGAAGTTGTACGAAAATTTCGGGATCACTTGCTAATTTGGAAAACACGTCTATATNNCCTCGTGGCGATTCTGCC]


>consensus_8601#3 TGGTTCCCACAGGGTCCANCATGGTCCCCTCATACGNTCCACCAAGGTCCACATGGTCCA CNTGGTCCTGCACGGCTCACAAGGTCCACATGGTCCACATGGTCCGCAAGGTCCGCACGG TCCACATGGTCCGCGGTAACCTAGTACAGCACATGCTCGGCGAACACAATCCCGCGGCAC CGCACACGTAATCGCAACAGCCCGGATTACAGCTCATCTTCCCCAAGGGCGGCAAAGTCG CAGGTCACGACAATTTTTAGCTCGTATGTACGGGCAGATGCAGCTCGGCGCTGGACAGCC GTATCCGCAGCAGGAACAGTTGCACGCGTACGCTCCCGGACTGCAACAATAAGCCAAGGG ATAGCAGCAGCTGCTTGAAGGAATAGAAACACAGTTCGGGGGGTGAAGAAGTTGTACGAA AATTTCGGGATCACTTGCTAATTTGGAAAACACGTCTATATNNCCTCGTGGCGATTCTGC C



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8601#0      ---------------TTTTTCAACAAACGCCACAACACATTATTTGTGTTTGCATACCTC 45
consensus_8601#3      ------------------------------------------------------------
consensus_8601#1      TTTTTTTAAAAGAATGTTTTCAACAAACCATACAACACATTATTTGTGTTTGCATACCCC 60
consensus_8601#2      ------------------------------------------------------------
                                                                                  

consensus_8601#0      CTCTTATATTTCCTCTATTTTTTTCTTCTTCCCTTTTCATACAGATGGCTCTCAACATTG 105
consensus_8601#3      ------------------------------------------------------------
consensus_8601#1      CCCTTATATTTCCCCTATTTTTTTCTTCTTCCCTTTTCATACGGATGGCTCTCAACATTG 120
consensus_8601#2      ------------------------------------------------------------
                                                                                  

consensus_8601#0      CTGTGCCGATGTCGGGCGTAGGTGACCTCCTGGAAGGATTCGGACTGCTTTCGCCGATTT 165
consensus_8601#3      ------------------------------------------------------------
consensus_8601#1      CTGTGCCGATGTCGGGCGTAGGTGACCTCCTGGAAGGATTCG------------------ 162
consensus_8601#2      ------------------------------------------------------------
                                                                                  

consensus_8601#0      CTCCCGTGAGCATCGACTTTCGCAGCAGCATCAAGAACCCGCTGTCACCAGTTGGTAGCG 225
consensus_8601#3      ------------------------------------------------------------
consensus_8601#1      ----------------------CAGCAGCATCAAGAACCCGCTGTCACCAGTTGGTAGCG 200
consensus_8601#2      --------------CCGAGCGACGGAGACAGGAAAAATCATCTGTGATCAATTA-TAGCG 45
                                                                                  

consensus_8601#0      AATCCAGCGGCGTTAGTTCGTTGGATTTGGAAGATATCAAGGTAAGGCATCAAGGCACCA 285
consensus_8601#3      ------------------------------------------------------------
consensus_8601#1      AATCCAGCGGCGTTAGTTCGTTGGATTTGGAAGATATCAAGGTAAGGCATCAAGGCACCA 260
consensus_8601#2      CGTTCA------TTCTTCCACTGGTGTTTGCTGTTTTCT-GCTCTGCCGCTCCGGTGCCT 98
                                                                                  

consensus_8601#0      ---TCAACTG-GTTTCAGTTGTCG-GTCCAGCTCGTTGGCTTCAATCGTACATGAACGCA 340
consensus_8601#3      ------------------------------------------------------------
consensus_8601#1      ---TCAACTG-GTTTCAGTTGTCG-GTCCAGCTCGTTGGCTTCAATCGTACATGAACGCA 315
consensus_8601#2      ATCTCTGCTGTGTTCCTCTCCTAGTGTCCTAGTGTTTAAAGTAATTCGTGTATATAGAGC 158
                                                                                  

consensus_8601#0      TTTTTCAGT---CGCATGCG-ACGGGCCATTCTTGCTCGCTGCAAGATGACTGCTGCGC- 395
consensus_8601#3      ------------------------------------------------------------
consensus_8601#1      TTTTTCAGT---CGCATGCG-ACGGGCCATTCTTGCTCGCTGCAAGATGACTGCTGCGC- 370
consensus_8601#2      TGTTTGTGTGCGTGAATTTGTGCGTGTGCTTCTTGAGCAACGATAGCGAGTCGTCGTGTG 218
                                                                                  

consensus_8601#0      TGGTGCAAGCAAGATATGGTTCACAAGGTCCAC-ACGGTC-CGCATGGACTGCAAGGCAC 453
consensus_8601#3      ------------------------------------------------------------
consensus_8601#1      TGGTGCAAGCAAGAAATGGTTCACAAGGTCCAC-ACGGTC-CGCATGGACTGCAAGGCAC 428
consensus_8601#2      TGGCGCAGCGGCGGTGACGTTCCGAGTGTCAGCTACTGTTGTGTGTGTGTTTCCGTGCTT 278
                                                                                  

consensus_8601#0      ACATGGTCCGGATGGTCCACATGGACCACATGGTATGCATGGT--CCACAAGGTCCAC-A 510
consensus_8601#3      ---------------------------------------TGGTTCCCACAGGGTCCANCA 21
consensus_8601#1      ACATGGTCCGGATGGTCCACATGGACCACATGGTATGCATGGT--CCACAAGGTCCAC-A 485
consensus_8601#2      AAAACCCCGGAAGGACACTCTTAGGAATATTCCCCGGTACAGC--CAGCAAAATCAAGTG 336
                                                               *   *  **   ** *   

consensus_8601#0      TGGTCCACAGGGTCCACATGGTCCGCAAGGTCCACAAGGTCCACATGGTCCACATGGTCC 570
consensus_8601#3      TGGTCCCC-----TCATACGNTCCAC--------CAAGGTCCACATGGTCCACNTGGTCC 68
consensus_8601#1      TGGTCCACAGGGTCCACATGGTCCGCAAGGTCCACAAGGTCCACATGGTCCACATGGTCC 545
consensus_8601#2      TGGTAAAATTCCATCATCAGTACCACCAACACCACCACCATCACGAAACCAAATCCAACC 396
                      ****          **   *  ** *        * *    ***     * *      **

consensus_8601#0      -GCACGGCTCACAAGGTCCACATGGTCCACATGGTCCGCAAG-GTCCGCACGGTCCACAT 628
consensus_8601#3      TGCACGGCTCACAAGGTCCACATGGTCCACATGGTCCGCAAG-GTCCGCACGGTCCACAT 127
consensus_8601#1      -GCACGGCTCAAAAGGTCCACATGGTCCACATGGTCCGCAAG-GTCCGCACGGTCCACAT 603
consensus_8601#2      TTCGCGCGCAGGAAGGAACTCTGGATTTGATCGAACTCCATCCGTCCGTACGA---AAAT 453
                        * **      ****  * *  * *      *  *  **   ***** ***    * **

consensus_8601#0      GGTCCGCGGTAAC-TAGTACAGCACATG-CTCGGCGAACACAATCCCGCGGCACCGCACA 686
consensus_8601#3      GGTCCGCGGTAACCTAGTACAGCACATG-CTCGGCGAACACAATCCCGCGGCACCGCACA 186
consensus_8601#1      GGTCCGCGGTAAC-TAGTACAGCACATG-CTCGGCGAACACAATCCCGCGGCACCGCACA 661
consensus_8601#2      TGGACACTCTGTC-TATGATGGCTCTCAACATTGCTGTGCCGATGTCG-GGCGTAGGTGA 511
                       *  * *  *  * **  *  ** *    *   **     * **  ** ***   *   *

consensus_8601#0      CGTAATCGCAACAGCCCGGATTACA---GCTCATCTTCCCCAAGGGCGGCAAAGT-CGCA 742
consensus_8601#3      CGTAATCGCAACAGCCCGGATTACA---GCTCATCTTCCCCAAGGGCGGCAAAGT-CGCA 242
consensus_8601#1      CGTAATCGCAACACCCCGGATTACA---GCTCATCCTCCCCAAGGGCGGCAAAGT-CGCA 717
consensus_8601#2      CCTC-CTGGAAGGATTCGGACTGCTTTCGCCGATTTCTCCCGTGAGCATCGACTTTCGCA 570
                      * *    * **     **** * *    **  **    ***  * **  * *  * ****

consensus_8601#0      G--GTCACGACAATTTTTAGCTCGTATGTACGGGCAGATGCAGCTCGGCGCTGGACAGCC 800
consensus_8601#3      G--GTCACGACAATTTTTAGCTCGTATGTACGGGCAGATGCAGCTCGGCGCTGGACAGCC 300
consensus_8601#1      G--GTCACGACAATTTTTAGCTCGTATGTACGGGCAGATGCAGCCCGGCGCTGGACAGCC 775
consensus_8601#2      GCAGCATCAAGAACCCGCTGTCACCAGTTGGTAGCGAATCCAG--CGGCGTTAGTTCGTT 628
                      *  *   * * **      *     *  *    **  ** ***  ***** * *   *  

consensus_8601#0      GTATCCGCAGCA------GGAACAGTTGCACGCGTACGCTCCCGGACTGCAACAATAGGC 854
consensus_8601#3      GTATCCGCAGCA------GGAACAGTTGCACGCGTACGCTCCCGGACTGCAACAATAAGC 354
consensus_8601#1      GTATCCGCAGCA------GGAACAGTTGCACGCGTACGCCCCCGGACTGCAACAATAGGC 829
consensus_8601#2      GGATTTGGAAGATATCAAGAAACAAATGCCTTCAT-CGCCCACGTTACTCGACGACAA-- 685
                      * **  * *  *      * ****  ***   * * *** * **     * ** * *   

consensus_8601#0      CAAGGGGTAGCAGCAGCTGCTTGAAGGAACTGGACAGACCATTTTATAGAAACACAGTTC 914
consensus_8601#3      CAAGGGATAGCAGCAGCTGCTTGAAGGAA-----------------TAGAAACACAGTTC 397
consensus_8601#1      CAAGGGGTAGCAGCAGCTGCTTGAAGGAACTGGACAGACCATTTTATAGAAACACAATTC 889
consensus_8601#2      CGAGGGA-AGAAGGATCTTCATCGTCCGGCCGCCCGG----------AAAAGTCCTCTTC 734
                      * ****  ** ** * ** * *                         * **   *  ***

consensus_8601#0      GGGGGGTGAAGAAGTTGTACGAAAAATTTCGGGATCACTTGCTAATTTGGAAAACACGTC 974
consensus_8601#3      GGGGGGTGAAGAAGTTGTACGAAAA-TTTCGGGATCACTTGCTAATTTGGAAAACACGTC 456
consensus_8601#1      GGGG-------------------------------------------------------- 893
consensus_8601#2      CAAC-------------------------------------------------------- 738
                                                                                  

consensus_8601#0      TAATAGGTTTGACTCTTTCGGCGAGAATCCAG 1006
consensus_8601#3      TA------TATNNCCTCGTGGCGATTCTGCC- 481
consensus_8601#1      --------------------------------
consensus_8601#2      --------------------------------
                                                      




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)