cluster # 8655

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8655 cluster # 8655 Sequences # 11 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8655#0 length = 956 sequences # 5
consensus_8655#1 length = 824 sequences # 3

consensus_8655#2 length = 659 sequences # 1
consensus_8655#3 length = 530 sequences # 1
consensus_8655#4 length = 503 sequences # 1

consensusID : consensus_8655#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 956
fasta sequence

                              [CAGCTCGAGCACATGTGGCCTTTTTTTTTATTTTTTTAAATAATTTACAAACAATCCATTTTTATTCATTTCTACCCATTTCTTACCGCTCACTTGCTAACAACATCATGGCCAAATACCTTGTTAAACGCATGGACGTCGTATATTTCACCGTACTGATGTACCAGCTTGTACACATCACCGTTCTCGTGGTTTTTCACCGGGAAGTACATCTTCAGAAAAGATTTGGGCAGCTCCGTTCTGGATACGAGATCGTCCACCGAGTAGATGCGGTTCTGCCGCTTACCCTTCGCGTCCAGGAACGATATCTTCACCTTGCTCAATCGATCGTCACAATACACGAACCCGACCAGATTATCGGTGATCATTCCGAACAGCGAAAGGGTCAGCGATGTGGTAAAGCCAATCGCTCCCACAATCTCGGCAGT-GGTCATCGACCAAATGTCCATGTAAGCGAGTCCGATCGATATGGGAACGGAAACGCCGGTGCAAACCATGGGATAGAATTTGAGCCTTTTCAACGAAGCGGTCAGCATGATTGACGGGAAGTGGTAGATTGTGGTCCAGTTTGTAGCGTTGCTCTCGTGGTCCTTTTCCGTCGAGGTTGTGGCCGGTTGTTCCGTACTGGCTAGTGCAGAGTTTGTGGAACAGTGTCGGACGAGGCCACCGAAAGCGGGTTTGTTGATGTTTTGTTGCTGCAAGCAGA-TCGCCTGCCGGTGGTGGGTCAGTGATGATATAACGCTGCCCTTCTTGGTGCCTAAACTTTGCACGAGGCGTAATGTGCGCAGCAT-A-TTGATGAAGTAATGCTTTGCACAATGTTTTTCAGTTAAAACAAGCCGTGGAAGAAGAACTTCTGTTGAATTGGACGAATTATTAGACAAGAAGTTATTTGGTGCCGATTTCCAGTAGGCCAACAGTTCTCGAGGAATTCCGCAGCTTTTAAATTATAAAAATGT]

[-] EMBL CNS09CZI             [CAGCTCGAGCACATGTGGCCTTTTTTTTTATTTTTTTAAATAATTTACAAACAATCCATTTTTATTCATTTCTACCCATTTCTTACCGCTCACTTGCTAACAACATCATGGCCAAATACCTTGTTAAACGCATGGACGTCGTATATTTCACCGTACTGATGTACCAGCTTGTACACATCACCGTTCTCGTGGTTTTTCACCGGGAAGTACATCTTCAGAAAAGATTTGGGCAGCTCCGTTCTGGATACGAGATCGTCCACCGAGTAGATGCGGTTCTGCCGCTTACCCTTCGCGTCCAGGAACGATATCTTCACCTTGCTCAATCGATCGTCACAATACACGAACCCGACCAGATTATCGGTGATCATTCCGAACAGCGAAAGGGTCAGCGATGTGGTAAAGCCAATCGCTCCCACAATCTCGGCAGT GGTCATCGACCAAATGTCCATGTAAGCGAGTCCGATCGATATGGGAACGGAAACGCCGGTGCAAACCATGGGATAGAATTTGAGCCTTTTCAACGAAGCGGTCAGCATGATTGACGGGAAGTGGTAGATTGTGGTCCAGTTTGTAGCGTTGCTCTCGTGGTCCTTTTCCGTCGAGGTTGTGGCCGGTTGTTCCGTACTGGCTAGTGCAGAGTTTGTGGAACAGTGTCGGACGAGGCCACCGAAAGCGGGTTTGTTGATGTTTTGTTGCTGCAAGCAGA TCGCCTGCCGGTGGTGGGTCAGTGATGATATAACGCTGCCCTTCTTGGTGCCTAAACTTTGCACGAGGCGTAATGTGCGCAGCAT A TTGATGAAGTAATGCTTTGCACAATGTTTTTCAGTTAAAACAAGCCGTGGAAGAAGAACTTCTGTTGAATTGGACGAATTA                                                                                   ]
[+] EMBL CNS09RM5             [                                                      TCCATTTTTATTCATTTCTACCCATTTCTTACCGCTCACTTGCTAACAACATCATGGCCAAATACCTTGTTAAACGCATGGACGTCGTATATTTCACCGTACTGATGTACCAGCTTGTACACATCACCGTTCTCGTGGTTTTTCACCGGGAAGTACATCTTCAGAAAAGATTTGGGCAGCTCCGTTCTGGATACGAGATCGTCCACCGAGTAGATGCGGTTCTGCCGCTTACCCTTCGCGTCCAGGAACGATATCTTCACCTTGCTCAATCGATCGTCACAATACACGAACCCGACCAGATTATCGGTGATCATTCCGAACAGCGAAAGGGTCAGCGATGTGGTAAAGCCAATCGCTCCCACAATCTCGGCAGTAGGTCATCGACCAAATGTCCATGTAAGCGAGTCCGATCGATATGGGAACGGAAACGCCGGTGCAAACCATGGGATAGAATTTGAGCCTTTTCAACGAAGCGGTCAGCATGATTGACGGGAAGTGGTAGATTGTGGTCCAGTTTGTAGCGTTGCTCTCGTGGTCCTTTTCCGTCGAGGTTGTGGCCGGTTGTTCCGTACTGGCTAGTGCAGAGTTTGTGGAACAGTGTCGGACGAGGCCACCGAAAGCGGGTTTGTTGATGTTTTGTTGCTGCAAGCAGA TCGCCTGCCGGTGGTGGGTCAGTTATGATATAACGCTGCCCTTCTTGGTGCCTAAACTTTGCACGAGGCGTAATGTGCGCA CATAA TTGATGAAGTAATGCTTTGCACAATGTTTTTCAGTTAAAACAAGCCGTGGAAGAAGAACTTCTGTTGAATTGGACGAATTATTAGACAAGAAGTTATTTGGTGCCGATTTCCAGTAGGCCAACAGTTCTCGAGGAATTCCGCAGCTTTTAAATTATAAAAATGT]
[+] EMBL CNS09CZJ             [                                                            TTTATTCATTTCTACCCATTTCTTACCGCTCACTTGCTAACAACATCATGGCCAAATACCTTGTTAAACGCATGGACGTCGTATATTTCACCGTACTGATGTACCAGCTTGTACACATCACCGTTCTCGTGGTTTTTCACCGGGAAGTACATCTTCAGAAAAGATTTGGGCAGCTCCGTTCTGGATACGAGATCGTCCACCGAGTAGATGCGGTTCTGCCGCTTACCCTTCGCGTCCAGGAACGATATCTTCACCTTGCTCAATCGATCGTCACAATACACGAACCCGACCAGATTATCGGTGATCATTCCGAACAGCGAAAGGGTCAGCGATGTGGTAAAGCCAATCGCTCCCACAATCTCGGCAGT GGTCATCGACCAAATGTCCATGTAAGCGAGTCCGATCGATATGGGAACGGAAACGCCGGTGCAAACCATGGGATAGAATTTGAGCCTTTTCAACGAAGCGGTCAGCATGATTGACGGGAAGTGGTAGATTGTGGTCCAGTTTGTAGCGTTGCTCTCGTGGTCCTTTTCCGTCGAGGTTGTGGCCGGTTGTTCCGTACTGGCTAGTGCAGAGTTTGTGGAACAGTGTCGGACGAGGCCACCGAAAGCGGGTTTGTTGATGTTTTGTTGCTGC AGCAGACTCGCCTGCCGGTGGTGGGTCAGTGATGATATAACGCTGCCCTTCTTGGTGCCTAAACTTTGCACGAGGCGTAATGTGCGCA CAT ATTTGATGAAGTAATGCTTTGCACAATGTTTTTCAGTTAAAACAAGCCGTGGAAGAAGAACTTCTGTTGAATTGGACGAATTATTAGACAAGAAGTTATTTGG        TCCAGTAGGCCAACAG                                       ]
[+] EMBL CNS098WJ             [                                                                                                                                                                                                                                                                                                                                                       ACCCGACCAGATTATCGGTGATCAGTCCAAACAGCGAAAGAGTTAGCGATGTGGTAAAGCCAATTGCTCCTACAATCTCGGCAGT GGTCATCGACCAAATGTCCATGTAAGCGAGTCCGATCGATATGGGAACGGAAACGCCGGTGCAAACCATGGGATAGAATTTGAGCCTTTTCAACGAAGCGGTCAGCATGATTGACGGGAAGTGGTAGATTGTGGTCCAGTTTGTAGCGTTGCTCTCGTGGTCCCTTTCCGTCGAGGTTGTGGCCGGT                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CNS098WI             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTGCAAGCAGA TCGCCTGCCGGTGGTGGGTCAGTGATGATATAACGCTGCCCTTCTTGGTGCCTAAACTTTGCACGAGGCGTAATGTGCGCAGCAT A TTGATGAAGTAATGCTTTGCACAATGTTTTTCAGTTAAAACAAGCCGTGGAAGAAGAACTTCTGTAGAATTGGACGAATTATTAGACAAGAAGTT                                                                     ]




>consensus_8655#0
CAGCTCGAGCACATGTGGCCTTTTTTTTTATTTTTTTAAATAATTTACAAACAATCCATT
TTTATTCATTTCTACCCATTTCTTACCGCTCACTTGCTAACAACATCATGGCCAAATACC
TTGTTAAACGCATGGACGTCGTATATTTCACCGTACTGATGTACCAGCTTGTACACATCA
CCGTTCTCGTGGTTTTTCACCGGGAAGTACATCTTCAGAAAAGATTTGGGCAGCTCCGTT
CTGGATACGAGATCGTCCACCGAGTAGATGCGGTTCTGCCGCTTACCCTTCGCGTCCAGG
AACGATATCTTCACCTTGCTCAATCGATCGTCACAATACACGAACCCGACCAGATTATCG
GTGATCATTCCGAACAGCGAAAGGGTCAGCGATGTGGTAAAGCCAATCGCTCCCACAATC
TCGGCAGTGGTCATCGACCAAATGTCCATGTAAGCGAGTCCGATCGATATGGGAACGGAA
ACGCCGGTGCAAACCATGGGATAGAATTTGAGCCTTTTCAACGAAGCGGTCAGCATGATT
GACGGGAAGTGGTAGATTGTGGTCCAGTTTGTAGCGTTGCTCTCGTGGTCCTTTTCCGTC
GAGGTTGTGGCCGGTTGTTCCGTACTGGCTAGTGCAGAGTTTGTGGAACAGTGTCGGACG
AGGCCACCGAAAGCGGGTTTGTTGATGTTTTGTTGCTGCAAGCAGATCGCCTGCCGGTGG
TGGGTCAGTGATGATATAACGCTGCCCTTCTTGGTGCCTAAACTTTGCACGAGGCGTAAT
GTGCGCAGCATATTGATGAAGTAATGCTTTGCACAATGTTTTTCAGTTAAAACAAGCCGT
GGAAGAAGAACTTCTGTTGAATTGGACGAATTATTAGACAAGAAGTTATTTGGTGCCGAT
TTCCAGTAGGCCAACAGTTCTCGAGGAATTCCGCAGCTTTTAAATTATAAAAATGT

consensusID : consensus_8655#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 824
fasta sequence

                              [TACCAGCTNGTAGACATCGCCGTTCTCGTGATTTTTCACCGGGAAGTACATCTTCAGAAAAGATTTGGGCAGCTCCGTTCTGGACACGAGATCGTCCACCGAGTAGATGCGGTTCTGCCGCTTACCCTTCGCGTCCAGGAACGATATCTTCACCTTGCTCAATCGATCGTCACAATACACGAACCCGACCAGATTATCGGTGATCAGTCCAAACAGCGAAAGAGTTAGCGATGTGGTAAAGCCTGCAATAAGCAAAATAATTACATTTTGGGTCTGGGTAGTTAAAGAGATTCAAAACGCAAGTGTAACAAACCAATCGCTCCCACAATCTCGGCAGTGGTCATCGAACAAATGTCCATGTAAGCGAGTCCGATCGATATGGGAACGGAAACGCCGGTGCAAACCATGGGATAGAATTTGAGCCTTTTCAACGAAGCGGTCAGCATGATTGACGGGAAGTGGTAGATTGTGGTCCAGTTTGTAGCGTTGCTCTCATTGTCCTTTTCCGTCGAGGTTGTGGCCGGTTGTTCCGTACTGGCTAGTGCAGAGTTTGTGGAACAGTATCGGACGAGGCCACCAAAAGCGGGTTTGTTGATGTTTTGTTGCTGCAAGCAGATCGCCTGCCGGTGGTGGGTCAGTGATGATATAACGCTGCCCTTCTTGGTGCCTAAACTTTGCACGAGGCGTAATGTGCGAAGCATATTGATGAAGTAATGCTTGGCACAATGTTTTTCAGTTAAAATAAGCCTTAGAAGAAGGACTGCTGTTAAATTGGACGAAATATTACACGGGAAGTTATATGGTGCCGATTTGTATTTCTTCGG]

[-] EMBL BX627772             [TACCAGCTNGTAGACATCGCCGTTCTCGTGATTTTTCACCGGGAAGTACATCTTCAGAAAAGATTTGGGCAGCTCCGTTCTGGACACGAGATCGTCCACCGAGTAGATGCGGTTCTGCCGCTTACCCTTCGCGTCCAGGAACGATATCTTCACCTTGCTCAATCGATCGTCACAATACACGAACCCGACCAGATTATCGGTGATCAGTCCAAACAGCGAAAGAGTTAGCGATGTGGTAAAGCCTGCAATAAGCAAAATAATTACATTTTGGGTCTGGGTAGTTAAAGAGATTCAAAACGCAAGTGTAACAAACCAATCGCTCCCACAATCTCGGCAGTGGTCATCGAACAAATGTCCATGTAAGCGAGTCCGATCGATATGGGAACGGAAACGCCGGTGCAAACCATGGGATAGAATTGGAGCCTTTTCAACGAAGCGGTCAGCATGATTGACGGGAAGTGGTAGATTGTGGTCCAGTTTGTAGCGTTGCCCTCATTGTCCTTTTCGGTCGACGTTGTGGCCGGTTGTTCCGTACTGGCTAGTGCAGAGTTTGTGGAACAGTATCGGACGAGGCCACCAAAAGCGGGTTTGTTGATGTTTTGTTGCTGCAAGCAGATCGCCTGCCGGTGGTGGGTCAGTGATGATATAACGCc                                                                                                                                                                           ]
[-] EMBL BX609230             [                                              TACATCTTCAGAAAAGATTTGGGCAGCTCCGTTCTGGATACGAGATCGTCCACCGAGTAGATGCGGTTCTGCCGCTTACCCTTCGCGTCCAGGAACGATATCTTCACCTTGCTCAATCGATCGTCACAATACACGAACCCGACCAGATTATCGGTGATCATTCCGAACAGCGAAAGGGTCAGCGATGTGGTAAAGCCTGCAATAAGCAAAATAATTACATTCCGGGTCTGGGCAGTTAAAGGGATTCAAAACGCAAGTGTAACAAACCAATCGCTCCCACAATCTCGGCAGTGGTCATCGACCAAATGTCCATGTAAGCGAGTCCGATCGATATGGGAACGGAAACGCCGGTGCAAACCATGGGATAGAATTTGAGCCTTTTCAACGAAGCAGTCAGCATGATTGACGGGAAGTGGTAGATTGTGGTCCAGTTTGTAGCGTTGCTCTCGTTGTCCTTTTCCGTCGAGGTTGTGGCCGGTTGTTCCGTACTGGCTAGTGCAGAGTTTGTGGAACAGTGTCGGACGAGGCCACCGAAAGCGGGTTTGTTGATGTTTTGTTGCTGCAAGCAGATCGCCTGCCGGTGGTAGGTCAGTGATGATATAACGCTGCCCTTCTTGGTGCCTAAACTTTGCACGAGGCGTAATGTGCGAAGCATATTGATGAAGT                                                                                                                ]
[-] EMBL BM619171             [                                                                                                                                                                                                                                                                                                                                                                          AGCGAGTCCGATCGATATGGGAACGGAAACGCCGGTGCAAACCATGGGGTAGAATTTGAGCCTTTTCAACGAAGCGGTCAGCATGATTGACGGGAAGTGGTAGATTGTGGTCCAGTTTGTAGCGTTGCTCTCATTGTCCTTTTCCGTCGAGGTTGTGGCCGGTTGTTCCGTACTGGCTAGTGCAGAGTTTGTGGAACAGTATCGGACGAGGTCACCAAAAGCGGGTTTGTTGATGTTTTGTTGCTGCAAGCAGATCGCCTGCCGGTGGTGGGTCAGTGATGATATAACGCTGCCCTTCTTGGTGCCTAAACTTTGCACGAGGCGTAATGTGCGCAGCATGTTGATGAAGCAATGCTTGGCACAATGTTTTTCAGTTAAAATAAGCCTTAGAAGAAGGACTGCTGTTAAATTGGACGAAATATTACACGGGAAGTTATATGGTGCCGATTTGTATTTCTTCGG]




>consensus_8655#1
TACCAGCTNGTAGACATCGCCGTTCTCGTGATTTTTCACCGGGAAGTACATCTTCAGAAA
AGATTTGGGCAGCTCCGTTCTGGACACGAGATCGTCCACCGAGTAGATGCGGTTCTGCCG
CTTACCCTTCGCGTCCAGGAACGATATCTTCACCTTGCTCAATCGATCGTCACAATACAC
GAACCCGACCAGATTATCGGTGATCAGTCCAAACAGCGAAAGAGTTAGCGATGTGGTAAA
GCCTGCAATAAGCAAAATAATTACATTTTGGGTCTGGGTAGTTAAAGAGATTCAAAACGC
AAGTGTAACAAACCAATCGCTCCCACAATCTCGGCAGTGGTCATCGAACAAATGTCCATG
TAAGCGAGTCCGATCGATATGGGAACGGAAACGCCGGTGCAAACCATGGGATAGAATTTG
AGCCTTTTCAACGAAGCGGTCAGCATGATTGACGGGAAGTGGTAGATTGTGGTCCAGTTT
GTAGCGTTGCTCTCATTGTCCTTTTCCGTCGAGGTTGTGGCCGGTTGTTCCGTACTGGCT
AGTGCAGAGTTTGTGGAACAGTATCGGACGAGGCCACCAAAAGCGGGTTTGTTGATGTTT
TGTTGCTGCAAGCAGATCGCCTGCCGGTGGTGGGTCAGTGATGATATAACGCTGCCCTTC
TTGGTGCCTAAACTTTGCACGAGGCGTAATGTGCGAAGCATATTGATGAAGTAATGCTTG
GCACAATGTTTTTCAGTTAAAATAAGCCTTAGAAGAAGGACTGCTGTTAAATTGGACGAA
ATATTACACGGGAAGTTATATGGTGCCGATTTGTATTTCTTCGG

consensusID : consensus_8655#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 659
fasta sequence

                              [CGTCCACCGAGTAGATGCGGTTCTGCCGCTTACCCTTCGCGTCCAGGAACGATATCTTCACCTTGCTCAATCGATCGTCACAATACACGAACCCGACCAGATTATCGGTGATCAGTCCAAACAGCGAAAGAGTTAGCGATGTGGTAAAGCCAATCGCTCCCACAATCTCGGCAGTGGTCATCGAACAAATGTCCATGTAAGCGAGTCCGATCGATATGGGAACGGAAACGCCGGTGCAAACCATGGGATAGAATTGGAGCCTTTTCAACGAAGCGGTCAGCATGATTGACGGGAAGTGGTAGATTGTGGTCCAGTTTGTAGCGTTGCCCTCATTGTCCTTTTCGGTCGACGTTGTGGCCGGTTGTTCCGTACTGGCTAGTGCAGAGTTTGTGGAACAGTATCGGACGAGGCCACCAAAAGCGGGTTTGTTGATGTTTTGTTGCTGCAAGCAGATCGCCTGCCGGTGGTGGGTCAGTGATGATATAACGCTGCCTTTCTTGGTGCCTAAACTTTGCACGAGGCGTAATGTGCGCAGCATATTGATGAAGCAATGCTTTGCACAATGTTTTTCAGTTAAAATAAGCCTTAGAAGAAGGACTGCTGTTAAATTGGACGAATTATTAGACGGGAAGTTATATGGTGCCGATTTGTTTTTCCGG]

[-] EMBL BM600962             [CGTCCACCGAGTAGATGCGGTTCTGCCGCTTACCCTTCGCGTCCAGGAACGATATCTTCACCTTGCTCAATCGATCGTCACAATACACGAACCCGACCAGATTATCGGTGATCAGTCCAAACAGCGAAAGAGTTAGCGATGTGGTAAAGCCAATCGCTCCCACAATCTCGGCAGTGGTCATCGAACAAATGTCCATGTAAGCGAGTCCGATCGATATGGGAACGGAAACGCCGGTGCAAACCATGGGATAGAATTGGAGCCTTTTCAACGAAGCGGTCAGCATGATTGACGGGAAGTGGTAGATTGTGGTCCAGTTTGTAGCGTTGCCCTCATTGTCCTTTTCGGTCGACGTTGTGGCCGGTTGTTCCGTACTGGCTAGTGCAGAGTTTGTGGAACAGTATCGGACGAGGCCACCAAAAGCGGGTTTGTTGATGTTTTGTTGCTGCAAGCAGATCGCCTGCCGGTGGTGGGTCAGTGATGATATAACGCTGCCTTTCTTGGTGCCTAAACTTTGCACGAGGCGTAATGTGCGCAGCATATTGATGAAGCAATGCTTTGCACAATGTTTTTCAGTTAAAATAAGCCTTAGAAGAAGGACTGCTGTTAAATTGGACGAATTATTAGACGGGAAGTTATATGGTGCCGATTTGTTTTTCCGG]




>consensus_8655#2
CGTCCACCGAGTAGATGCGGTTCTGCCGCTTACCCTTCGCGTCCAGGAACGATATCTTCA
CCTTGCTCAATCGATCGTCACAATACACGAACCCGACCAGATTATCGGTGATCAGTCCAA
ACAGCGAAAGAGTTAGCGATGTGGTAAAGCCAATCGCTCCCACAATCTCGGCAGTGGTCA
TCGAACAAATGTCCATGTAAGCGAGTCCGATCGATATGGGAACGGAAACGCCGGTGCAAA
CCATGGGATAGAATTGGAGCCTTTTCAACGAAGCGGTCAGCATGATTGACGGGAAGTGGT
AGATTGTGGTCCAGTTTGTAGCGTTGCCCTCATTGTCCTTTTCGGTCGACGTTGTGGCCG
GTTGTTCCGTACTGGCTAGTGCAGAGTTTGTGGAACAGTATCGGACGAGGCCACCAAAAG
CGGGTTTGTTGATGTTTTGTTGCTGCAAGCAGATCGCCTGCCGGTGGTGGGTCAGTGATG
ATATAACGCTGCCTTTCTTGGTGCCTAAACTTTGCACGAGGCGTAATGTGCGCAGCATAT
TGATGAAGCAATGCTTTGCACAATGTTTTTCAGTTAAAATAAGCCTTAGAAGAAGGACTG
CTGTTAAATTGGACGAATTATTAGACGGGAAGTTATATGGTGCCGATTTGTTTTTCCGG

consensusID : consensus_8655#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 530
fasta sequence

                              [CCGAACACGAAAGGTCACGATGTGTAAACCAAATCGGCTCCCACAATCTCGCAGTGGTCATCGACCAAATGTCCATGTAAGCGAGTCCGATCGATATGGGAACGGAAACGCCGGTCCAAACCATGGGATAGAATTTGAGCCTTTTCAACGAAGCAGTCAGCATGATTGACGGGAAGTGTAGATTGTGGTCCATTTGTAGCGTTGCTCTCGTTGTCCTTTTCCGTCGAGTTTGTGCCGTTGTTCCGTACTGGCTAGTGCAGAGTTTGTGGAACAGTGTCGGACGAGCCACCGAAACGGTTTTTGATTTTTGTTCTGCAAGCAGATCGCCTCCGGTGGTAGGTCAGTGATGATATAACGCTGCCCTTCTTGGTGCCTAAACTTTGCACGAGGCGTAATGTGCGCAGCATATTGATGAAGTAATGCTTTGCACAATGTTTTTCAGTTAAAACAAGCCGTGGAAGAAGAACTTCTGTTGAATTGGACGAATTATTAGACAAGAAGGTTATTGTGCCGATTGTTTTAACCTCGGG]

[-] EMBL AL695322             [CCGAACACGAAAGGTCACGATGTGTAAACCAAATCGGCTCCCACAATCTCGCAGTGGTCATCGACCAAATGTCCATGTAAGCGAGTCCGATCGATATGGGAACGGAAACGCCGGTCCAAACCATGGGATAGAATTTGAGCCTTTTCAACGAAGCAGTCAGCATGATTGACGGGAAGTGTAGATTGTGGTCCATTTGTAGCGTTGCTCTCGTTGTCCTTTTCCGTCGAGTTTGTGCCGTTGTTCCGTACTGGCTAGTGCAGAGTTTGTGGAACAGTGTCGGACGAGCCACCGAAACGGTTTTTGATTTTTGTTCTGCAAGCAGATCGCCTCCGGTGGTAGGTCAGTGATGATATAACGCTGCCCTTCTTGGTGCCTAAACTTTGCACGAGGCGTAATGTGCGCAGCATATTGATGAAGTAATGCTTTGCACAATGTTTTTCAGTTAAAACAAGCCGTGGAAGAAGAACTTCTGTTGAATTGGACGAATTATTAGACAAGAAGGTTATTGTGCCGATTGTTTTAACCTCGGG]




>consensus_8655#3
CCGAACACGAAAGGTCACGATGTGTAAACCAAATCGGCTCCCACAATCTCGCAGTGGTCA
TCGACCAAATGTCCATGTAAGCGAGTCCGATCGATATGGGAACGGAAACGCCGGTCCAAA
CCATGGGATAGAATTTGAGCCTTTTCAACGAAGCAGTCAGCATGATTGACGGGAAGTGTA
GATTGTGGTCCATTTGTAGCGTTGCTCTCGTTGTCCTTTTCCGTCGAGTTTGTGCCGTTG
TTCCGTACTGGCTAGTGCAGAGTTTGTGGAACAGTGTCGGACGAGCCACCGAAACGGTTT
TTGATTTTTGTTCTGCAAGCAGATCGCCTCCGGTGGTAGGTCAGTGATGATATAACGCTG
CCCTTCTTGGTGCCTAAACTTTGCACGAGGCGTAATGTGCGCAGCATATTGATGAAGTAA
TGCTTTGCACAATGTTTTTCAGTTAAAACAAGCCGTGGAAGAAGAACTTCTGTTGAATTG
GACGAATTATTAGACAAGAAGGTTATTGTGCCGATTGTTTTAACCTCGGG

consensusID : consensus_8655#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 503
fasta sequence

                              [AGTCCAAACAGCGAAAGAGTTAGCGATGTGGTAAAGCCAATCGCTCCCACAATCTCGCGCAGTGGTCATCGAACAAATGTCCATGTAAGCGAGTCCGATCGATATGGGAACGGAAACGCCGGTGCAAACCATGGGATAGAATTGGAGCCTTTTCAACGAAGCGGTCAGCATGATTGACGGGAAGTGNTAGATTGTGGTCCAGTTTGTAGCGTTGCCCTCATTGTCCTTTTCGTCGACGTTGTGCCGGTTGTTCCGGTACTGGCTAGTGCAGAGTTTGTGGAACAGTATCGGACGAGGCCACCAAAGCGGTTTGTTGATGTTTTGTTGCTGCAAGCAGATCGCCTCCGGTGTGGGTCAGTGATGATATAACGCTGCCTTTCTTGGTGCCTAAACTTTGCACGAGGCGTAATGTGCGCAGCATATTGATGAAGCAATGCTTTGCACAATGTTTTCCAGTTAAAATAGCCTTAGAAGAAGGACTGCTGTTAATGCCTCGGCGATCT]

[-] EMBL AL931198             [AGTCCAAACAGCGAAAGAGTTAGCGATGTGGTAAAGCCAATCGCTCCCACAATCTCGCGCAGTGGTCATCGAACAAATGTCCATGTAAGCGAGTCCGATCGATATGGGAACGGAAACGCCGGTGCAAACCATGGGATAGAATTGGAGCCTTTTCAACGAAGCGGTCAGCATGATTGACGGGAAGTGNTAGATTGTGGTCCAGTTTGTAGCGTTGCCCTCATTGTCCTTTTCGTCGACGTTGTGCCGGTTGTTCCGGTACTGGCTAGTGCAGAGTTTGTGGAACAGTATCGGACGAGGCCACCAAAGCGGTTTGTTGATGTTTTGTTGCTGCAAGCAGATCGCCTCCGGTGTGGGTCAGTGATGATATAACGCTGCCTTTCTTGGTGCCTAAACTTTGCACGAGGCGTAATGTGCGCAGCATATTGATGAAGCAATGCTTTGCACAATGTTTTCCAGTTAAAATAGCCTTAGAAGAAGGACTGCTGTTAATGCCTCGGCGATCT]




>consensus_8655#4
AGTCCAAACAGCGAAAGAGTTAGCGATGTGGTAAAGCCAATCGCTCCCACAATCTCGCGC
AGTGGTCATCGAACAAATGTCCATGTAAGCGAGTCCGATCGATATGGGAACGGAAACGCC
GGTGCAAACCATGGGATAGAATTGGAGCCTTTTCAACGAAGCGGTCAGCATGATTGACGG
GAAGTGNTAGATTGTGGTCCAGTTTGTAGCGTTGCCCTCATTGTCCTTTTCGTCGACGTT
GTGCCGGTTGTTCCGGTACTGGCTAGTGCAGAGTTTGTGGAACAGTATCGGACGAGGCCA
CCAAAGCGGTTTGTTGATGTTTTGTTGCTGCAAGCAGATCGCCTCCGGTGTGGGTCAGTG
ATGATATAACGCTGCCTTTCTTGGTGCCTAAACTTTGCACGAGGCGTAATGTGCGCAGCA
TATTGATGAAGCAATGCTTTGCACAATGTTTTCCAGTTAAAATAGCCTTAGAAGAAGGAC
TGCTGTTAATGCCTCGGCGATCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8655#1      ------------------------------------------------------------
consensus_8655#2      ------------------------------------------------------------
consensus_8655#4      ------------------------------------------------------------
consensus_8655#0      CAGCTCGAGCACATGTGGCCTTTTTTTTTATTTTTTTAAATAATTTACAAACAATCCATT 60
consensus_8655#3      ------------------------------------------------------------
                                                                                  

consensus_8655#1      ------------------------------------------------------------
consensus_8655#2      ------------------------------------------------------------
consensus_8655#4      ------------------------------------------------------------
consensus_8655#0      TTTATTCATTTCTACCCATTTCTTACCGCTCACTTGCTAACAACATCATGGCCAAATACC 120
consensus_8655#3      ------------------------------------------------------------
                                                                                  

consensus_8655#1      -----------------------------------------TACCAGCTNGTAGACATCG 19
consensus_8655#2      ------------------------------------------------------------
consensus_8655#4      ------------------------------------------------------------
consensus_8655#0      TTGTTAAACGCATGGACGTCGTATATTTCACCGTACTGATGTACCAGCTTGTACACATCA 180
consensus_8655#3      ------------------------------------------------------------
                                                                                  

consensus_8655#1      CCGTTCTCGTGATTTTTCACCGGGAAGTACATCTTCAGAAAAGATTTGGGCAGCTCCGTT 79
consensus_8655#2      ------------------------------------------------------------
consensus_8655#4      ------------------------------------------------------------
consensus_8655#0      CCGTTCTCGTGGTTTTTCACCGGGAAGTACATCTTCAGAAAAGATTTGGGCAGCTCCGTT 240
consensus_8655#3      ------------------------------------------------------------
                                                                                  

consensus_8655#1      CTGGACACGAGATCGTCCACCGAGTAGATGCGGTTCTGCCGCTTACCCTTCGCGTCCAGG 139
consensus_8655#2      -------------CGTCCACCGAGTAGATGCGGTTCTGCCGCTTACCCTTCGCGTCCAGG 47
consensus_8655#4      ------------------------------------------------------------
consensus_8655#0      CTGGATACGAGATCGTCCACCGAGTAGATGCGGTTCTGCCGCTTACCCTTCGCGTCCAGG 300
consensus_8655#3      ------------------------------------------------------------
                                                                                  

consensus_8655#1      AACGATATCTTCACCTTGCTCAATCGATCGTCACAATACACGAACCCGACCAGATTATCG 199
consensus_8655#2      AACGATATCTTCACCTTGCTCAATCGATCGTCACAATACACGAACCCGACCAGATTATCG 107
consensus_8655#4      ------------------------------------------------------------
consensus_8655#0      AACGATATCTTCACCTTGCTCAATCGATCGTCACAATACACGAACCCGACCAGATTATCG 360
consensus_8655#3      ------------------------------------------------------------
                                                                                  

consensus_8655#1      GTGATCAGTCCAAACAGCGAAAGAGTTAGCGATGTGGTAAAGCCTGCAATAAGCAAAATA 259
consensus_8655#2      GTGATCAGTCCAAACAGCGAAAGAGTTAGCGATGTGGTAAAGCC---------------- 151
consensus_8655#4      ------AGTCCAAACAGCGAAAGAGTTAGCGATGTGGTAAAGCC---------------- 38
consensus_8655#0      GTGATCATTCCGAACAGCGAAAGGGTCAGCGATGTGGTAAAGCC---------------- 404
consensus_8655#3      ---------CCGAACA-CGAAAGG-TCA-CGATGTG-TAAACCA---------------- 31
                               ** **** ******  * * ******* **** *                 

consensus_8655#1      ATTACATTTTGGGTCTGGGTAGTTAAAGAGATTCAAAACGCAAGTGTAACAAACCAATCG 319
consensus_8655#2      -------------------------------------------------------AATCG 156
consensus_8655#4      -------------------------------------------------------AATCG 43
consensus_8655#0      -------------------------------------------------------AATCG 409
consensus_8655#3      -------------------------------------------------------AATCG 36
                                                                             *****

consensus_8655#1      -CTCCCACAATCTCG-GCAGTGGTCATCGAACAAATGTCCATGTAAGCGAGTCCGATCGA 377
consensus_8655#2      -CTCCCACAATCTCG-GCAGTGGTCATCGAACAAATGTCCATGTAAGCGAGTCCGATCGA 214
consensus_8655#4      -CTCCCACAATCTCGCGCAGTGGTCATCGAACAAATGTCCATGTAAGCGAGTCCGATCGA 102
consensus_8655#0      -CTCCCACAATCTCG-GCAGTGGTCATCGACCAAATGTCCATGTAAGCGAGTCCGATCGA 467
consensus_8655#3      GCTCCCACAATCTCG--CAGTGGTCATCGACCAAATGTCCATGTAAGCGAGTCCGATCGA 94
                       **************  ************* *****************************

consensus_8655#1      TATGGGAACGGAAACGCCGGTGCAAACCATGGGATAGAATTTGAGCCTTTTCAACGAAGC 437
consensus_8655#2      TATGGGAACGGAAACGCCGGTGCAAACCATGGGATAGAATTGGAGCCTTTTCAACGAAGC 274
consensus_8655#4      TATGGGAACGGAAACGCCGGTGCAAACCATGGGATAGAATTGGAGCCTTTTCAACGAAGC 162
consensus_8655#0      TATGGGAACGGAAACGCCGGTGCAAACCATGGGATAGAATTTGAGCCTTTTCAACGAAGC 527
consensus_8655#3      TATGGGAACGGAAACGCCGGTCCAAACCATGGGATAGAATTTGAGCCTTTTCAACGAAGC 154
                      ********************* ******************* ******************

consensus_8655#1      GGTCAGCATGATTGACGGGAAGTGGTAGATTGTGGTCCAGTTTGTAGCGTTGCTCTCATT 497
consensus_8655#2      GGTCAGCATGATTGACGGGAAGTGGTAGATTGTGGTCCAGTTTGTAGCGTTGCCCTCATT 334
consensus_8655#4      GGTCAGCATGATTGACGGGAAGTGNTAGATTGTGGTCCAGTTTGTAGCGTTGCCCTCATT 222
consensus_8655#0      GGTCAGCATGATTGACGGGAAGTGGTAGATTGTGGTCCAGTTTGTAGCGTTGCTCTCGTG 587
consensus_8655#3      AGTCAGCATGATTGACGGGAAGTG-TAGATTGTGGTCCA-TTTGTAGCGTTGCTCTCGTT 212
                       *********************** ************** ************* *** * 

consensus_8655#1      GTCCTTTTCCGTCGAGGTTGTGGCCGGTTGTTCCG-TACTGGCTAGTGCAGAGTTTGTGG 556
consensus_8655#2      GTCCTTTTCGGTCGACGTTGTGGCCGGTTGTTCCG-TACTGGCTAGTGCAGAGTTTGTGG 393
consensus_8655#4      GTCCTTTTC-GTCGACGTTGTG-CCGGTTGTTCCGGTACTGGCTAGTGCAGAGTTTGTGG 280
consensus_8655#0      GTCCTTTTCCGTCGAGGTTGTGGCCGGTTGTTCCG-TACTGGCTAGTGCAGAGTTTGTGG 646
consensus_8655#3      GTCCTTTTCCGTCGAGTTTGTG--CCGTTGTTCCG-TACTGGCTAGTGCAGAGTTTGTGG 269
                      ********* *****  *****  * ********* ************************

consensus_8655#1      AACAGTATCGGACGAGGCCACCAAAAGCGGGTTTGTTGATGTTTTGTTGCTGCAAGCAGA 616
consensus_8655#2      AACAGTATCGGACGAGGCCACCAAAAGCGGGTTTGTTGATGTTTTGTTGCTGCAAGCAGA 453
consensus_8655#4      AACAGTATCGGACGAGGCCACCAAAGC--GGTTTGTTGATGTTTTGTTGCTGCAAGCAGA 338
consensus_8655#0      AACAGTGTCGGACGAGGCCACCGAAAGCGGGTTTGTTGATGTTTTGTTGCTGCAAGCAGA 706
consensus_8655#3      AACAGTGTCGGACGAG-CCACCGAAA-CGGTTT--TTGAT-TTTTGTT-CTGCAAGCAGA 323
                      ****** ********* ***** **    * **  ***** ******* ***********

consensus_8655#1      TCGCCTGCCGGTGGTGGGTCAGTGATGATATAACGCTGCCCTTCTTGGTGCCTAAACTTT 676
consensus_8655#2      TCGCCTGCCGGTGGTGGGTCAGTGATGATATAACGCTGCCTTTCTTGGTGCCTAAACTTT 513
consensus_8655#4      TCGCCT-CCGGTG-TGGGTCAGTGATGATATAACGCTGCCTTTCTTGGTGCCTAAACTTT 396
consensus_8655#0      TCGCCTGCCGGTGGTGGGTCAGTGATGATATAACGCTGCCCTTCTTGGTGCCTAAACTTT 766
consensus_8655#3      TCGCCT-CCGGTGGTAGGTCAGTGATGATATAACGCTGCCCTTCTTGGTGCCTAAACTTT 382
                      ****** ****** * ************************ *******************

consensus_8655#1      GCACGAGGCGTAATGTGCGAAGCATATTGATGAAGTAATGCTTGGCACAATGTTTTTCAG 736
consensus_8655#2      GCACGAGGCGTAATGTGCGCAGCATATTGATGAAGCAATGCTTTGCACAATGTTTTTCAG 573
consensus_8655#4      GCACGAGGCGTAATGTGCGCAGCATATTGATGAAGCAATGCTTTGCACAATGTTTTCCAG 456
consensus_8655#0      GCACGAGGCGTAATGTGCGCAGCATATTGATGAAGTAATGCTTTGCACAATGTTTTTCAG 826
consensus_8655#3      GCACGAGGCGTAATGTGCGCAGCATATTGATGAAGTAATGCTTTGCACAATGTTTTTCAG 442
                      ******************* *************** ******* ************ ***

consensus_8655#1      TTAAAATAAGCCTTAGAAGAAGGACTGCTGTTAAATTGGACGAAATATTACACGGGAAGT 796
consensus_8655#2      TTAAAATAAGCCTTAGAAGAAGGACTGCTGTTAAATTGGACGAATTATTAGACGGGAAGT 633
consensus_8655#4      TTAAAATA-GCCTTAGAAGAAGGACTGCTGTTAATGCCTCGGCGATCT------------ 503
consensus_8655#0      TTAAAACAAGCCGTGGAAGAAGAACTTCTGTTGAATTGGACGAATTATTAGACAAGAAGT 886
consensus_8655#3      TTAAAACAAGCCGTGGAAGAAGAACTTCTGTTGAATTGGACGAATTATTAGACAAGAAGG 502
                      ****** * *** * ******* *** ***** *       *   * *            

consensus_8655#1      TATATGGTGCCGATTTGTATTTCTTCGG-------------------------------- 824
consensus_8655#2      TATATGGTGCCGATTTGT--TTTTCCGG-------------------------------- 659
consensus_8655#4      ------------------------------------------------------------
consensus_8655#0      TATTTGGTGCCGATTTCCAGTAGGCCAACAGTTCTCGAGGAATTCCGCAGCTTTTAAATT 946
consensus_8655#3      T-TATTGTGCCGATTGTTTTAACCTCGGG------------------------------- 530
                                                                                  

consensus_8655#1      ----------
consensus_8655#2      ----------
consensus_8655#4      ----------
consensus_8655#0      ATAAAAATGT 956
consensus_8655#3      ----------