These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_867#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 527 fasta sequence [CCGCTGAAGCACGTGCTGGAGCTGTCCGGGCGGATCGACAATCTGCCCGGACCGCTCAGCTGCCCCAACTGCCAGAGCATCTTCGCGGAGGTACCGTGGAATCGGTCCTGCGAGGAGACGGCCATCGAATCGCACTGGTGCACCTGCGCCAACTTCCAGCCGATCGATAAGCGTTCGCCCATGGTGCAGCGGGCGATCGCGTTCGTGATTGATTATGTGAATCGCGATCTGGAGGAGCATCGTAACAGCACGACGGCGAACTATGCGTGCGCTAAGCTAGCGGTTGGGTCGATCACGCTCGCTAAGATGGCGCACGAACCGAAGGGCCGGCTGCCGTACCGGGACTATTTGTTGATCTTTGACGGTAAGCCGGGCGGTGGGAAGTTTGAGTCGACGGTGCGACACTATCAGGAGCGCGATGCGTTCGAGATCACGGGGTCGATCAGTCGGCTGAACGAGTACGCCAGCCAGAGCGAGTGTATGCATATAGACTACCTGCGCAAGTACTGCTACTGCCAGCGGACGAA] [+] EMBL BM645819 [CCGCTGAAGCACGTGCTGGAGCTGTCCGGGCGGATCGACAATCTGCCCGGACCGCTCAGCTGCCCCAACTGCCAGAGCATCTTCGCGGAGGTACCGTGGAATCGGTCCTGCGAGGAGACGGCCATCGAATCGCACTGGTGCACCTGCGCCAACTTCCAGCCGATCGATAAGCGTTCGCCCATGGTGCAGCGGGCGATCGCGTTCGTGATTGATTATGTGAATCGCGATCTGGAGGAGCATCGTAACAGCACGACGGCGAACTATGCGTGCGCTAAGCTAGCGGTTGGGTCGATCACGCTCGCTAAGATGGCGCACGAACCGAAGGGCCGGCTGCCGTACCGGGACTATTTGTTGATCTTTGACGGTAAGCCGGGCGGTGGGAAGTTTGAGTCGACGGTGCGACACTATCAGGAGCGCGATGCGTTCGAGATCACGGGGTCGATCAGTCGGCTGAACGAGTACGCCAGCCAGAGCGAGTGTATGCATATAGACTACCTGCGCAAGTACTGCTACTGCCAGCGGACGAA] consensusID : consensus_867#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 482 fasta sequence [AATCGCCACGAGGTGTAATTCAGCGATCACGGGCTACGCGTTCGGCCCCGTTCGTATAGCTGCTGACGGGGTGGCTCGAGGAACGGCTGCCGTTTAACTTCATCTGGCTGCCAGAATAGGTTCCGCGAGGAGCATCACCGAAATATGCAAAGCGCTCCAAAGATCAATCGCGAATCGGCTGACGAAANCCGTACGATATTGCACGCCACACTGAAGCACGTGCTGGAGGCTTGTCCCGGGGCGGATCTGGACAATCTTGGCCGGAACCNGGTCACGCTGGCCCAACGTGCCAGGAGCATCTTCGCGGGAGGTACCGTGGAATCGGTCCTGCGAGTGAGACGGCCATCGAATCGCACTGGGTGCACCTGNGGCCCAACTTCCATGACCGCATCGATAAGCGTTCGNCCATAGTGCCAACAGGGCGATCGACGTTCGCTGCATTTGATTATGTGAATCGGCGATTCTGGAGGAGCATCGTAACA] [+] EMBL BX469528 [AATCGCCACGAGGTGTAATTCAGCGATCACGGGCTACGCGTTCGGCCCCGTTCGTATAGCTGCTGACGGGGTGGCTCGAGGAACGGCTGCCGTTTAACTTCATCTGGCTGCCAGAATAGGTTCCGCGAGGAGCATCACCGAAATATGCAAAGCGCTCCAAAGATCAATCGCGAATCGGCTGACGAAANCCGTACGATATTGCACGCCACACTGAAGCACGTGCTGGAGGCTTGTCCCGGGGCGGATCTGGACAATCTTGGCCGGAACCNGGTCACGCTGGCCCAACGTGCCAGGAGCATCTTCGCGGGAGGTACCGTGGAATCGGTCCTGCGAGTGAGACGGCCATCGAATCGCACTGGGTGCACCTGNGGCCCAACTTCCATGACCGCATCGATAAGCGTTCGNCCATAGTGCCAACAGGGCGATCGACGTTCGCTGCATTTGATTATGTGAATCGGCGATTCTGGAGGAGCATCGTAACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_867#0 --CCGCTGAAGCACGTGCTGGAGCTGTCCGGGCGGATCGACAATCTGCCCGGACCGCTCA 58 consensus_867#1 AATCGCCACGAGGTGTAATTCAGCGATCACGG--GCTACGCGTTCGGCCCCGTTCGTATA 58 *** ** * *** ** ** * * * ** **** * ** * consensus_867#0 GCTGCCCCAACTGCCAGAGCATCTTCGCGGAGGTACCGTGGAATCGGTCCTGCGAGGAGA 118 consensus_867#1 GCTGC------TGACGGGGTGGCT-CGAGGAACGGCTGCCGTTTAACTTCATCTGGCTGC 111 ***** ** * * * ** ** *** * * * * * * * * * consensus_867#0 CGGCCATCGAATCGCACTGGTGCACCTGCGCCAACTTCCAGCCGATCGATAAGCGTTCGC 178 consensus_867#1 CAGA-ATAGGTTCCGCGAGGAGCATCACCGAAATATGCAAAGCGCTCCAAA---GATCAA 167 * * ** * ** ** *** * ** * * * * ** ** * * * ** consensus_867#0 CCATGGTGCAGCGGGCGATCGC-GTTCGTGATTG---ATTATG-TGAATCGCGATCTGGA 233 consensus_867#1 TCGCGAATCGGCTGACGAAANCCGTACGATATTGCACGCCACACTGAAGCACGTGCTGGA 227 * * * ** * *** * ** ** **** * **** * ** ***** consensus_867#0 GGAGCATCGTAACAGCACGACGGCGAACTATGCGTGCGCTAAGCTAGCGGTTGGGTCGAT 293 consensus_867#1 GG---CTTGTCCCGGGGCGGATCTGGACAAT-CTTGGCCGGAACCN--GGTCACGCTGGC 281 ** * ** * * ** * ** ** * ** * * * *** * * consensus_867#0 CACGCTCGCTAAGATGGCGCACGAACCGAAGGGCCGGCTGCCGTACCGGGACTATTTGTT 353 consensus_867#1 CCAACGTGCCAGGA--GCATCTTCGCGGGAGGT---ACCGTGGAATCGGTCCTGCGAGTG 336 * * ** * ** ** * * *** * * * * *** ** ** consensus_867#0 GATCTTTGACGGTAAGCCGGGCGGTGGGAAGTTTGAGTCGACGGTGCGACACTATCAGGA 413 consensus_867#1 AGAC--GGCCATCGAATCGCACTGGGTGCACCTGNGGCCCAACTTCCATGACC----GCA 390 * * * * ** * * * * * * * * * * * ** * * consensus_867#0 GCGCGATGCGTTCGAGATCACGGGGTCGATCAGTCGGCTGAACGAGTACGCCAGCCAGAG 473 consensus_867#1 TCGATAAGCGTTCGN--CCATAGTGCCAACAGGGCGATCGA-------CGTTCGCTGCAT 441 ** * ******* ** * * * * * ** ** ** ** * consensus_867#0 CGAGTGTATGCATATAGACTAC-CTGCGCAAGTACTGCTACTGCCAGCGGACGAA 527 consensus_867#1 TTGAT-TATGTGAATCGGCGATTCTGGAGGAGCATCGTAACA------------- 482 * **** ** * * * *** ** * * ** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||