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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8679#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1577 fasta sequence
[CACATACGAAAGAAAACAACACGCTGCCGCTAAAGTTGCCGCAGCAGCTTCGTTTTACCAAAAACGAGAGTAAATTGTGCTTCTAAAACCGTAAAACATTATAACGCACACATGGAGGAAGTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCG-TTCGTTAAAGCGTACGCATGATTTTTTCGTCGCCAACCAATCGCTGCTGCCGGAGATCGATGAAACACTTGAAAAGTTGAAGTACAACATTAAAGCACGGGACACGTATGGGTTGGTTTTTGACCGTGCGGCCAAGGCAAAGGCGCTGGCAGCGAAGTCGCGTGATAGTGACCGAATCGAGGGACAGCATGGCGGCAAAGATGGCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGAAGCGCATCGGATGGTACAAATGGTCAGATGGCGCTGGTTCCTGCCGCTACCCCGACACCCCAGGCTGCCTCCAGCGCGGTGCAAATACTGCCAAAGAAAGCGCCCACCATCCCGAAACCGAAATGGCACGCCCCGTGGAAGCTGTGCCGCGTCATCTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCCGGGCAACGAGTGGTTCGCTACGGGTGCTGCCGATCGGGTGATTAAAATTTGGGACCTGGCCAGCGGCAAGCTGAAGCTCTCGCTTACCGGCCACGTCAGCACGGTGCGGGCGCTGGCGGTAAGCCCGCGGCATCCGTACCTGTTCAGCTGCGGCGAGGACCGGCAGGTG-AAGTGCT-GGGACCTGGAGTACAACAAGGTGATCCGGCACTACCACGGCCACCTGTCGGCGGTCTACACGATGTCGCTGCATCCGACGATCGACGTGCTGGTGACGGCCGGGCGCGATTCGACGGCGCGCGTGTGGGACATGCGCACCAAGGCCAACATCCACACGCTGACCGGGCACACGAACACGGTCGCGAGCGTGGTAACGCAGGCGGCCAATCCGCAGATCATCACCGGCAGCCACGACTCGACCGTGCGGCTGTGGGATCTGGCCGCCGGCAAGAGCATGTGCACGCTGACCAACCACAAGAAGAGCGTGCGTGCGATCGTGCTGCACCCGTCGCTGTACATGTTTGCGTCGGCCTCGCCGGACAACATCAAGCAGTGGCGCTGCCCGGAGGGCAACTTCATCCAGAACCTGGGCGGCCACAACTCGATCGTGAACTGTATGGCGGTCAATCCGGAGGGGGTGCTGGTGTCGGGCGGCGACAATGGTACGATGTTTTTCTGGGACTGGCGCACCGGGTACAACTTCCAGCGCTTCCAGGCGGCGGTCCAGCCGGGCTCGATGGACAGCGAGGCGGGCATTTTCTCGATGACGTTCGACCAGTCCGGCTCGCGGCTGATCACGACCGAGGCGGACAAGACGATCAAGATCTACAAGGAGGACGACGAGGCGACGGAGGAGTCGCATCCGATCAACTGGCGGCCGGAAATTATTAAGCGTTGAAAATATTAAGCAGGAGCGTCTCAACTTTGTACGGAAATACATTTAATTTTAATGCGAACAATGGAAAAAAATAAAAAAAAGGCAGCATG]
[+] EMBL CNS097VB [CACATACGAAAGAAAACAACACGCTGCCGCTAAAGTTGCCGCAGCAGCTTCGTTTTACCAAAAACGAGAGTAAATTGTGCTTCTAAAACCGTAAAACATTATAACGCACACATGGAGGAAGTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCGTTTCGTTAAAGCGTACGCATGATTTTTTCGTCGCCAACCAATCGCTGCTGCCGGAGATCGATGAAACACTTGAAAAGTTGAAGTACAACATTAAAGCACGGGACACGTATGGGTTGGTTTTTGACCGTGCGGCCAAGGCAAAGGCGCTGGCAGCGAAGTCGCGTGATAGTGACCGAATCGAGGGACAGCATGGCGGCAAAGATGGCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGAAGCGCATCGGATGGTACAAATGGTCAGATGGCGCTGGTTCCTGCCGCTACCCCGACACCCCAGGCTGCCTCCAGCGCGGTGCAAATACTGCCAAAGAAAGCGCCCACCATCCCGAAACCGAAATGGCACGCCCCGTGGAAGCTGTGCCGCGTCATCTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCCGGGCAACGAGTGGTTCGCTACGGGTGCTGCCGATCGGGTGATTAAAATTTGGGACCTGGCCAGCGGCAAGCTGAAGCTCTCGCTTACCGGCCACGTCAGCACGGTGCGGGCGCTGGCGGTAAGCCCGCGGCATCCGTACCTGTTCAGCTGCGGCGAGGACCGGCAGGTGAAAGTGCT GGGACCTGGAGTACAACAAGGTGATCCGGCACTACCACGGCCACCTGTCGGCGGTCTACACGATGTCGCTGCATCCGACGATCGACGTGCTGGTGACGGCCGGGCGCGATTCGACGGCGCGCGTGTGGGAAATGCGCACCAAGGCCAACATCCACACGCTGACCGGGCACACGAACACGGTCG ]
[+] EMBL CNS09KN2 [ AAGAAAACAACACGCTGCCGCTAAAGTTGCCGCAGCAGCTTCGTTTTACCAAAAACGAGAGTAAATTGTGCTTCTAAAACCGTAAAACATTATAACGCACACATGGAGGAAGTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCG TTCGTTAAAGCGTACGCATGATTTTTTCGTCGCCAACCAATCGCTGCTGCCGGAGATCGATGAAACACTTGAAAAGTTGAAGTACAACATTAAAGCACGGGACACGTATGGGTTGGTTTTTGACCGTGCGGCCAAGGCAAAGGCGCTGGCAGCGAAGT GTGTGATAGTGACCGAATCGAGGGACAGCATGGCGGCAAAGATGGCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGAAGCGCATCGGATGGTACAAATGGTCAGATGGCGCTGGTTCCTGCCGCTACCCCGACACCCCAGGCTGCCTCCAGCGCGGTGCAAATACTGCCAAAGAAAGCGCCCACCATCCCGAAACCGAAATGGCACGCCCCGTGGAAGCTGTGCCGCGTCATCTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCCGGGCAACGAGTGGTTCGCTACGGGTGCTGCCGATCGGGTGATTAAAATTTGGGACCTGGCCAGCGGCAAGCTGAAGCTCTCGCTTACCGGCCACGTCAGCACGGTGCGGGCGCTGGCGGTAAGCCCGCGGCATCCGTACCTGTTCAGCTGCGGCGAGGACCGGCAGGTG AAGTGCTAGGGACCTGGAGTACAACAAGGTGATCCGGCACTACCACGGCCACCTGTCGGCGGTCTACACGATGTCGCTGCATCCGACGATCGACGTGCTGGTGACGGCCGGGCGCGATTCGACGGCGCGCGTGTGGGACATGCGCACCAAGGCCAACATCCACACGCTGACCGGGCACACGAACACGGTCGCGAGCGTGGTAACGCAGGCGGCCAATCCGCAGATCATCACCGGCAGCCACGACTCGACCGTGCGGC ]
[+] EMBL BX605296 [ ACACGCTGCCGCTAAAGTTGCCGCAGCAGCTTCGTTTTACCAAAACCGAGAGTAAATTGTGCTTCTAAAACCGTAAAACATTATAACGCACACATGGAGGAAGTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCG TTCGTTAAAGCGTACGCACGATTTTTTCGTCGCCAACCAATCGCTGCTGCCGGAGATCGACGAAACACTTGAAAAGTTGAAATACAACATTAAAGCTCGGGACACGTATGGGTTGGTTTTTGACCGTGCGGCCAAGGCAAAGGCGCTGGCAGC ]
[-] EMBL CNS097VC [ GGCAACAAGTGGTTCGCTACGGGTGCTGCCGATCGGGTGATTAAAATTTGGGACCTGGCCAGCGGCAAGTTGAAG TTTCGCTTACCGGCCACGTCAGCACGGTGCGGGGGTTGGCGGTAAGCCCGCGGCATCCGTACCTGTTCAGCTGCGGCGAGGACCGGCAGGTG AAGTGCT GGGACCTGGAGTACAACAAGGTGATCCGGCACTACCACGGCCACCTGTCGGCGGTCTACACGATGTCGCTGCATCCGACGATCGACGTGCTGGTGACGGCCGGGCGCGATTCGACGGCGCGCGTGTGGGACATGCGCACCAAGGCCAACATCCACACGCTGACCGGGCACACGAAAACGGTCGCGAGCGTGGTAACGCAGGCGGCCAATCCGCAGATCATCACCGGCAGCCACGACTCGACCGTGCGGCTGTGGGATCTGGCCGCCGGCAAGAGCATGTGCACGCTGACCAACCACAAGAAGGGCGTGCGTGCGATCGTGCTGCACCCGTCGCTGTACATGTTTGCGTCGGCCTCGCCGGACAACATCAAGCAGTGGCGCTGCCCGGAGGGCAACTTCATCCAGAACCTGGGCGGCCACAACTCGATCGTGAACTGTATGGCGGTCAATCCGGAGGGGGTGCTGGTGTCGGGCGGCGACAATGGTACGATGTTTTTCTGGGACTGGCGCACCGGGTACAACTTCCAGCGCTTCCAGGCGGCGGTCCAGCCGGGCTCGATGGACAGCGAGGCGGGCATTTTCTCGATGACGTTCGACCAGTCCGGCTCGCGGCTGATCACGACCGAGGCGGACAAGACGATCAAGATCTACAAGGAGGACGACGAGGCGACGGAGGAGTCGCATCCGATCCACTGGCGGCCGGAAATTATTAAGCGTTGAAAA ]
[-] EMBL CNS09KN3 [ CCGGCCACGTCAGCACGGTGCGGGGGCTGGCGGTAAGCCCGCGGCATCCGTACCTGTTCAGCTGCGGCGAGGACCGGCAGGTG AAGTGCT GGGACCTGGAGTACAACAAGGTGATCCGGCACTACCACGGCCACCTGTCGGCGGTCTACACGATGTCGCTGCATCCGACGATCGACGTGCTGGTGACGGCCGGGCGCGATTCGACGGCGCGCGTGTGGGACATGCGCACCAAGGCCAACATCCACACGCTGACCGGGCACACGAAAACGGTCGCGAGCGTGGTAACGCAGGCGGCCAATCCGCAGATCATCACCGGCAGCCACGACTCGACCGTGCGGCTGTGGGATCTGGCCGCCGGCAAGAGCATGTGCACGCTGACCAACCACAAGAAGAGCGTGCGTGCGATCGTGCTGCACCCGTCGCTGTACATGTTTGCGTCGGCCTCGCCGGACAACATCAAGCAGTGGCGCTGCCCGGAGGGCAACTTCATCCAGAACCTGGGCGGCCACAACTCGATCGTGAACTGTATGGCGGTCAATCCGGAGGGGGTGCTGGTGTCGGGCGGCGACAATGGTACGATGTTTTTCTGGGACTGGCGCACCGGGTACAACTTCCAGCGCTTCCAGGCGGCGGTCCAGCCGGGCTCGATGGACAGCGAGGCGGGCATTTTCTCGATGACGTTCGACCAGTCCGGCTCGCGGCTGATCACGACCGAGGCGGACAAGACGATCAAGATCTACAAGGAGGACGACGAGGCGACGGAGGAGTCGCATCCGATCAACTGGCGGCCGGAAATTATTAAGCGT ]
[-] EMBL BX466646 [ cgntgcCTGGTGNC GCCCGGCCCGATTCGACCGCGCGCGTGTGGGACATGCGCACCAAGGCCAACATCCACACGCTGACCGGCCACACGAACACGGTCGCGAGCGTGGTAACGCAGGCGGCCAATCCGCAGATCATCACCGGCAGCCACGACTCGACCGTGCGGCTGTGGGATCTGGCCGCCGGCAAGAGCATGTGCACGCTGACCAACCACAAGAAGAGCGTGCGTGCGATCGTGCTGCACCCGTCGCTGTACATGTTTGCGTCGGCCTCGCCGGACAACATCAAGCAGTGGCGCTGCCCGGAAGGCAACTTCATCCAGAACCTGGGCGGCCACAACTCGATCGTGAACTGTATGGCGGTCAATCCGGAGGGGGTGCTGGTGTCGGGCGGCGACAATGGTACGATGTTTTTCTGGGACTGGCGCACCGGGTACAACTTCCAGCGCTTCCAGGCGGCGGTCCAGCCGGGCTCGATGGACAGCGAGGCGGGCATTTTCTCGATGACGTTCGACCAGTCCGGCTCGCGGCTGATCACGACCGAGGCGGACAAGACGATCAAGATCTACAAGGAGGACGACGAGGCGACGGAGGAGTCGCATCCGATCAACTGGCGGCCGGAAATTATTAAGCGTAGAAAGTATTAAGCAGGAGCGTCTCAACTTTGTACGGAAATACATTTAATTTTAATGCGAACAATGGAAAAAAATAAAAAAAAGGCAGCATG]
consensusID : consensus_8679#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 698 fasta sequence
[CCGCGGACGCGTGGGCGCTGCCGCTAAAGTTGCCGCAGCAGCTTCGTTTTATCAAAAACGAGATTAAATTGTGCTGCTAAAACCGTAAAAAATTGTACCGCACACATGGAGGAAGTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCGTTCGTTAAAGCGTACGCATGATTTTTTCGTCGCCAACCAATCGCTGCTGCCGGAGATCGACGAAACACTTGAAAAGTTGAAATACAACATTAAAGCTCGGGACACGTATGGGTTGGTTTTCGACCGTACGGCCAAGGCAAAAGCGCTGGCAGCGAAGCGGGGCGATAGTGACCGGATCGAGGGACAGCATGGCGGCAAGGATGGCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGTAGCGCACCGGATGGTACAAACGGACAGATGGCGCTGGTTCCTGCCGCTACCCCGACACCCCAGGCTGCCTCCAACGCGGTGCAAATACTGCCAAAGAAAGCGCCCACCATCCCGAAACCGAAATGGCACGCCCCCTGGAAGCTGTGCCGCGTCATTTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCCGGGCAACGAGTGGTTCGCTACGGGTGCCGCCGATCGGGTGA-TTAAAATTTGGGACCTGGCCAGCGGCAAGCTGAAGCTCTCGCTTACCGGCCACGTCAGCACGGTGCGGGC]
[+] EMBL BM600555 [CCGCGGACGCGTGGGCGCTGCCGCTAAAGTTGCCGCAGCAGCTTCGTTTTATCAAAAACGAGATTAAATTGTGCTGCTAAAACCGTAAAAAATTGTACCGCACACATGGAGGAAGTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCGTTCGTTAAAGCGTACGCATGATTTTTTCGTCGCCAACCAATCGCTGCTGCCGGAGATCGACGAAACACTTGAAAAGTTGAAATACAACATTAAAGCTCGGGACACGTATGGGTTGGTTTTCGACCGTACGGCCAAGGCAAAAGCGCTGGCAGCGAAGCGGGGCGATAGTGACCGGATCGAGGGACAGCATGGCGGCAAGGATGGCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGTAGCGCACCGGATGGTACAAACGGACAGATGGCGCTGGTTCCTGCCGCTACCCCGACACCCCAGGCTGCCTCCAACGCGGTGCAAATACTGCCAAAGAAAGCGCCCACCATCCCGAAACCGAAATGGCACGCCCCCTGGAAGCTGTGCCGCGTCATTTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCCGGGCAACGAGTGGTTCGCTACGGGTGCCGCCGATCGGGTGA TTAAAATTTGGGACCTGGCCAGCGGCAAGCTGAAGCTCTCGCTTACCGGCCACGTCAGCACGGTGCGGGC]
[+] EMBL BM595864 [ ccgGCCGCAGCAGCTTCGTTTTATCAAAAACGAGATTAAATTGTGCTGCTAAAACCGTAAAAAATTGTACCGCACACATGGAGGAAGTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCGTTCGTTAAAGCGTACGCATGATTTTTTCGTCGCCAACCAATCGCTGCTGCCGGAGATCGACGAAACACTTGAAAAGTTGAAATACAACATTAAAGCTCGGGACACGTATGGGTTGGTTTTCGACCGTACGGCCAAGGCAAAAGCGCTGGCAGCGAAGCGGGGCGATAGTGACCGGATCGAGGGACAGCATGGCGGCAAGGATGGCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGTAGCGCACCGGATGGTACAAACGGACAGATGGCGCTGGTTCCTGCCGCTACCCCGACACCCCAGGCTGCCTCCAACGCGGTGCAAATACTGCCAAAGAAAGCGCCCACCATCCCGAAACCGAAATGGCACGCCCCCTGGAAGCTGTGCCGCGTCATTTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCCGGGCAACGAGTGGTTCGCTACGGGTGCCGCCGATCGGGTGATTTAAAATTTGGGAC ]
consensusID : consensus_8679#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 690 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCGTATGGGTTGGTTTTTGACCGTGCGGCCAAGGCAAAGGCGCTGGCAGCGAAGCGTGGTGATAGTGACCGAATCGAGGGACAGCATGGCGGCAAGGATGGCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGAAGCGCATCGGATGGTACAAATGGTCAGATGGCGCTGGTTCCTGCCGCTACCCCGACACCCCAGGCTGCCTCCAGCGCGGTGCAAATACTGCCAAAGAAAGCGCCTACCATCCCGAAACCGAAATGGCACGCCCCGTGGAAGCTGTGCCGCGTCATTTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCCGGGCAACGAGTGGTTCGCTACGGGTGCTGCCGATCGGGTGATTAAAATTTGGGACCTGGCCAGCGGCAAGCTGAAGCTCTCGCTTACCGGCCACGTCAGCACGGTGCGGGCGCTGGCGGTAAGCCCGCGGCATCCGTACCTGTTCAGCTGCGGCGAGGACCGGCAGGTGAAGTGCTGGGACCTGGAGTACAACAAGGTGATCCGGCACTACCACGGCCACCTGTCGGCGGTCTACACGATGTCGCTGCATCCGACGATCGACGTGCTGGTGACGGCCGGGCGCGATTCGACGGCGCGCGTGTGGGACATGCGCACCAAGGCCAACATCC]
[+] EMBL BM577379 [CCGCCCACGCGTCCGCCCACGCGTCCGCGTATGGGTTGGTTTTTGACCGTGCGGCCAAGGCAAAGGCGCTGGCAGCGAAGCGTGGTGATAGTGACCGAATCGAGGGACAGCATGGCGGCAAGGATGGCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGAAGCGCATCGGATGGTACAAATGGTCAGATGGCGCTGGTTCCTGCCGCTACCCCGACACCCCAGGCTGCCTCCAGCGCGGTGCAAATACTGCCAAAGAAAGCGCCTACCATCCCGAAACCGAAATGGCACGCCCCGTGGAAGCTGTGCCGCGTCATTTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCCGGGCAACGAGTGGTTCGCTACGGGTGCTGCCGATCGGGTGATTAAAATTTGGGACCTGGCCAGCGGCAAGCTGAAGCTCTCGCTTACCGGCCACGTCAGCACGGTGCGGGCGCTGGCGGTAAGCCCGCGGCATCCGTACCTGTTCAGCTGCGGCGAGGACCGGCAGGTGAAGTGCTGGGACCTGGAGTACAACAAGGTGATCCGGCACTACCACGGCCACCTGTCGGCGGTCTACACGATGTCGCTGCATCCGACGATCGACGTGCTGGTGACGGCCGGGCGCGATTCGACGGCGCGCGTGTGGGACATGCGCACCAAGGCCAACATCC]
consensusID : consensus_8679#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 562 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGCCGTATGGGTTGGAGGTTGCGTTCCGCATCCCGGCCCGCGCTACCGTCGAGCTGTCGATTGATTTCGACTACATTTTTCTCAAGTGGCAAGAGTACCCGCCGGATGCGAACCATGGTCACTACATTCCATCGTCGATCATTTCGCTGCTGCTGCCGTCCGCCCGCAACTACACCTCCATTCCGCGGGAGGCGGCCCTGTTCCGGGAGTCGTTCAATGCGACCCAGCTGGCCGGCTACTTTCTGCAGGTGCGGACCGAGGCGTTGCTGCTGACGCTTCCGACGCCGGATTTCAGCATGCCGTACAATGTGATCTGCCTGGCGTGTACAGTGGTGGCGCTTGCATTTGGGCCGATCCATAACATCTCCACGAAGCGCATCGTGGCGAAGGGCAAGGAAAAGGACAAAGTGTCGCTCGGGGAGAAGGTGAAGCAGTTTTTCAAAATTAATAAGAAGCCAACCAAAGAGGAGCACACGGCCAGCACGGAAGACTTGAATGCGCCCGACACGGAATAAAGACATGTCCACCCTCCCATG]
[+] EMBL BM596709 [CCGCCCACGCGTCCGCCCACGCGTCCGGCCGTATGGGTTGGAGGTTGCGTTCCGCATCCCGGCCCGCGCTACCGTCGAGCTGTCGATTGATTTCGACTACATTTTTCTCAAGTGGCAAGAGTACCCGCCGGATGCGAACCATGGTCACTACATTCCATCGTCGATCATTTCGCTGCTGCTGCCGTCCGCCCGCAACTACACCTCCATTCCGCGGGAGGCGGCCCTGTTCCGGGAGTCGTTCAATGCGACCCAGCTGGCCGGCTACTTTCTGCAGGTGCGGACCGAGGCGTTGCTGCTGACGCTTCCGACGCCGGATTTCAGCATGCCGTACAATGTGATCTGCCTGGCGTGTACAGTGGTGGCGCTTGCATTTGGGCCGATCCATAACATCTCCACGAAGCGCATCGTGGCGAAGGGCAAGGAAAAGGACAAAGTGTCGCTCGGGGAGAAGGTGAAGCAGTTTTTCAAAATTAATAAGAAGCCAACCAAAGAGGAGCACACGGCCAGCACGGAAGACTTGAATGCGCCCGACACGGAATAAAGACATGTCCACCCTCCCATG]
consensusID : consensus_8679#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 270 fasta sequence
[AGATCCCCCGATTTAAACACACGCTGCGCTAAAGTTGCCGCAGCAGCTTCGTTACAAACGAGAGTAAATTGTGCTTCTAAAACCGTAAAACATTATAACGGCACAACCATGGAGGGAAGTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCGTTCGGTTTTAAAAGGCCGGTTACGGCACGGATTTTTTTTTCGGTCGGCCAAAACCCAAAATTCGGCCTGGCCTTGGCCCGGGAAGATCGACCGAAACCACTTGAAAAGTTGAAATAC]
[+] EMBL AL692682 [AGATCCCCCGATTTAAACACACGCTGCGCTAAAGTTGCCGCAGCAGCTTCGTTACAAACGAGAGTAAATTGTGCTTCTAAAACCGTAAAACATTATAACGGCACAACCATGGAGGGAAGTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCGTTCGGTTTTAAAAGGCCGGTTACGGCACGGATTTTTTTTTCGGTCGGCCAAAACCCAAAATTCGGCCTGGCCTTGGCCCGGGAAGATCGACCGAAACCACTTGAAAAGTTGAAATAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8679#0 CACATACGAAAGAAAACAACACGCTGCCGCTAAAGTTGCCGCAGCAGCTTCGTTTTACCA 60
consensus_8679#2 ------------------------------------------------------------
consensus_8679#1 ------CCGCGGACGCGTGGGCGCTGCCGCTAAAGTTGCCGCAGCAGCTTCGTTTTATCA 54
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 ------------------------------------------------------------
consensus_8679#0 AAAACGAGAGTAAATTGTGCTTCTAAAACCGTAAAACATTATAACGCACACATGGAGGAA 120
consensus_8679#2 ------------------------------------------------------------
consensus_8679#1 AAAACGAGATTAAATTGTGCTGCTAAAACCGTAAAAAATTGTACCGCACACATGGAGGAA 114
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 ------------------------------------------------------------
consensus_8679#0 GTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCGTTCGTTAAAGCGTACGCATGATTTT 180
consensus_8679#2 ------------------------------------------------------------
consensus_8679#1 GTTCAGCGTCACTCGGTGCACACGTTGGTGTTCCGTTCGTTAAAGCGTACGCATGATTTT 174
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 --------------------CCGCCCACGCGTCCGCCCACGCGTCCGGCCGTATGGGTTG 40
consensus_8679#0 TTCGTCGCCAACCAATCGCTGCTGCCGGAGATCGATGAAACACTTGAAAAGTTGAAGTAC 240
consensus_8679#2 ------------------------------------------------------CCGCCC 6
consensus_8679#1 TTCGTCGCCAACCAATCGCTGCTGCCGGAGATCGACGAAACACTTGAAAAGTTGAAATAC 234
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 GAGGTTGCGTTCCGCATCCCGGCCCGCGCTACCGTCGAGCTGTCGATTGATTTCGACTAC 100
consensus_8679#0 A-ACATTAAAGCACGGGAC-ACGTATGGGTTGGTTTTTGACCGTGCGGCCAAGGCAAAGG 298
consensus_8679#2 ACGCGTCCGCCCACGCGTCCGCGTATGGGTTGGTTTTTGACCGTGCGGCCAAGGCAAAGG 66
consensus_8679#1 A-ACATTAAAGCTCGGGAC-ACGTATGGGTTGGTTTTCGACCGTACGGCCAAGGCAAAAG 292
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 ATTTTTCTCAAGTGGCAAG--AGTACCCGCCGGATGCGAACCATGGTCACTACATTCCAT 158
consensus_8679#0 CGCTGGCAGCGAAGTCGCGTGATAGTGACCGAATCGAGGGACAGCATGGCGGCAAAGATG 358
consensus_8679#2 CGCTGGCAGCGAAGCGTGGTGATAGTGACCGAATCGAGGGACAGCATGGCGGCAAGGATG 126
consensus_8679#1 CGCTGGCAGCGAAGCGGGGCGATAGTGACCGGATCGAGGGACAGCATGGCGGCAAGGATG 352
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 CGTCGATCATTTCGCTGC-TGCTGCCGTCCGCCCGCAACTACACCTCCATTCCGCGGGAG 217
consensus_8679#0 GCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGAAGCGCATCGGATGGTACAAATG 418
consensus_8679#2 GCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGAAGCGCATCGGATGGTACAAATG 186
consensus_8679#1 GCGTGTTGGCAATAACAGCCGCCGGCGAACAGGAAGGTAGCGCACCGGATGGTACAAACG 412
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 GCGGCCCTGTTCCGGGAGTCGTTCAATGCGACCCAGCTGGCCGGCTACTTTCTGCAGGTG 277
consensus_8679#0 GTCAGATGGCGCTGGTTCCTGCCGCTACCCCGAC---ACCCCAGGCTGCCTC-CAGCGCG 474
consensus_8679#2 GTCAGATGGCGCTGGTTCCTGCCGCTACCCCGAC---ACCCCAGGCTGCCTC-CAGCGCG 242
consensus_8679#1 GACAGATGGCGCTGGTTCCTGCCGCTACCCCGAC---ACCCCAGGCTGCCTC-CAACGCG 468
consensus_8679#4 -------------AGATCCC-CCGATTTAAACAC---ACGCTGCGCTAAAGT-TGCCGCA 42
consensus_8679#3 CGGACCGAGGCGTTGCTGCTGACGCTTCCGACGCCGGATTTCAGCATGCCGTACAATGTG 337
* * * ** * * * * *
consensus_8679#0 GTGCAAATACTGCCAAAGAAAGCGC-CCACCATCCCGAAACCGAAATGGCACGCCCCGTG 533
consensus_8679#2 GTGCAAATACTGCCAAAGAAAGCGC-CTACCATCCCGAAACCGAAATGGCACGCCCCGTG 301
consensus_8679#1 GTGCAAATACTGCCAAAGAAAGCGC-CCACCATCCCGAAACCGAAATGGCACGCCCCCTG 527
consensus_8679#4 GCAGCTTCGTTACAAACGAGAGTAAATTGTGCTTCTAAAACCGTAAAACATTATAACGGC 102
consensus_8679#3 ATCTGCCTGGCGTGTACAGTGGTGG-CGCTTGCATTTGGGCCGATCCATAACATCTCCAC 396
* * *** *
consensus_8679#0 GAAGCTGTGCCGCGTCATCTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCC 593
consensus_8679#2 GAAGCTGTGCCGCGTCATTTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCC 361
consensus_8679#1 GAAGCTGTGCCGCGTCATTTCGGGCCATCTGGGCTGGGTGCGTTGCGTTGCGGTGGAGCC 587
consensus_8679#4 ACAACCATGGAGGGAAGTTCAGCGTCACTCGG--TGCACACGTTGGTGTTCCGTTCGGTT 160
consensus_8679#3 GAAGC---GCATCGTGGCGAAGGGCAAG--GAAAAGGACAAAGTGTCGCTCGG-GGAGAA 450
* * * * * * * * * ** * * *
consensus_8679#0 GGGCAACGAGTGGTTCGCTACGGGTGCTGCCGATCGGGTGATTAAAATTTGGGACCTGGC 653
consensus_8679#2 GGGCAACGAGTGGTTCGCTACGGGTGCTGCCGATCGGGTGATTAAAATTTGGGACCTGGC 421
consensus_8679#1 GGGCAACGAGTGGTTCGCTACGGGTGCCGCCGATCGGGTGATTAAAATTTGGGACCTGGC 647
consensus_8679#4 TTAAAAGGCCGGTTACGGCACGGATTTTTTTT-TCGGTCGGCCAAAACCCAAAATTCGGC 219
consensus_8679#3 GGTGAAGCAGTTTTTCAAAATTAATAAGA------AGCCAACCAAAGAGGAGCACACGGC 504
** * * * * * *** * ***
consensus_8679#0 C-A-GCGGCAAGCTGAAGCTCTCGCTTACCGGCCACGTCAGCACGGTGCGGGCGCTGGCG 711
consensus_8679#2 C-A-GCGGCAAGCTGAAGCTCTCGCTTACCGGCCACGTCAGCACGGTGCGGGCGCTGGCG 479
consensus_8679#1 C-A-GCGGCAAGCTGAAGCTCTCGCTTACCGGCCACGTCAGCACGGTGCGGGC------- 698
consensus_8679#4 CTG-GCCTTGGCCCGGGAAGATCG---ACCGAAACCACTTGAAAAGTTGAAATAC----- 270
consensus_8679#3 CAGCACGGAAGACTTGAATGC------GCCCGACACGGAATAAAGACATGTCCACCCTCC 558
* * * ** * *
consensus_8679#0 GTAAGCCCGCGGCATCCGTACCTGTTCAGCTGCGGCGAGGACCGGCAGGTGAAGTGCTGG 771
consensus_8679#2 GTAAGCCCGCGGCATCCGTACCTGTTCAGCTGCGGCGAGGACCGGCAGGTGAAGTGCTGG 539
consensus_8679#1 ------------------------------------------------------------
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 CATG-------------------------------------------------------- 562
consensus_8679#0 GACCTGGAGTACAACAAGGTGATCCGGCACTACCACGGCCACCTGTCGGCGGTCTACACG 831
consensus_8679#2 GACCTGGAGTACAACAAGGTGATCCGGCACTACCACGGCCACCTGTCGGCGGTCTACACG 599
consensus_8679#1 ------------------------------------------------------------
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 ------------------------------------------------------------
consensus_8679#0 ATGTCGCTGCATCCGACGATCGACGTGCTGGTGACGGCCGGGCGCGATTCGACGGCGCGC 891
consensus_8679#2 ATGTCGCTGCATCCGACGATCGACGTGCTGGTGACGGCCGGGCGCGATTCGACGGCGCGC 659
consensus_8679#1 ------------------------------------------------------------
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 ------------------------------------------------------------
consensus_8679#0 GTGTGGGACATGCGCACCAAGGCCAACATCCACACGCTGACCGGGCACACGAACACGGTC 951
consensus_8679#2 GTGTGGGACATGCGCACCAAGGCCAACATCC----------------------------- 690
consensus_8679#1 ------------------------------------------------------------
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 ------------------------------------------------------------
consensus_8679#0 GCGAGCGTGGTAACGCAGGCGGCCAATCCGCAGATCATCACCGGCAGCCACGACTCGACC 1011
consensus_8679#2 ------------------------------------------------------------
consensus_8679#1 ------------------------------------------------------------
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 ------------------------------------------------------------
consensus_8679#0 GTGCGGCTGTGGGATCTGGCCGCCGGCAAGAGCATGTGCACGCTGACCAACCACAAGAAG 1071
consensus_8679#2 ------------------------------------------------------------
consensus_8679#1 ------------------------------------------------------------
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 ------------------------------------------------------------
consensus_8679#0 AGCGTGCGTGCGATCGTGCTGCACCCGTCGCTGTACATGTTTGCGTCGGCCTCGCCGGAC 1131
consensus_8679#2 ------------------------------------------------------------
consensus_8679#1 ------------------------------------------------------------
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 ------------------------------------------------------------
consensus_8679#0 AACATCAAGCAGTGGCGCTGCCCGGAGGGCAACTTCATCCAGAACCTGGGCGGCCACAAC 1191
consensus_8679#2 ------------------------------------------------------------
consensus_8679#1 ------------------------------------------------------------
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 ------------------------------------------------------------
consensus_8679#0 TCGATCGTGAACTGTATGGCGGTCAATCCGGAGGGGGTGCTGGTGTCGGGCGGCGACAAT 1251
consensus_8679#2 ------------------------------------------------------------
consensus_8679#1 ------------------------------------------------------------
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 ------------------------------------------------------------
consensus_8679#0 GGTACGATGTTTTTCTGGGACTGGCGCACCGGGTACAACTTCCAGCGCTTCCAGGCGGCG 1311
consensus_8679#2 ------------------------------------------------------------
consensus_8679#1 ------------------------------------------------------------
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 ------------------------------------------------------------
consensus_8679#0 GTCCAGCCGGGCTCGATGGACAGCGAGGCGGGCATTTTCTCGATGACGTTCGACCAGTCC 1371
consensus_8679#2 ------------------------------------------------------------
consensus_8679#1 ------------------------------------------------------------
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 ------------------------------------------------------------
consensus_8679#0 GGCTCGCGGCTGATCACGACCGAGGCGGACAAGACGATCAAGATCTACAAGGAGGACGAC 1431
consensus_8679#2 ------------------------------------------------------------
consensus_8679#1 ------------------------------------------------------------
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 ------------------------------------------------------------
consensus_8679#0 GAGGCGACGGAGGAGTCGCATCCGATCAACTGGCGGCCGGAAATTATTAAGCGTTGAAAA 1491
consensus_8679#2 ------------------------------------------------------------
consensus_8679#1 ------------------------------------------------------------
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 ------------------------------------------------------------
consensus_8679#0 TATTAAGCAGGAGCGTCTCAACTTTGTACGGAAATACATTTAATTTTAATGCGAACAATG 1551
consensus_8679#2 ------------------------------------------------------------
consensus_8679#1 ------------------------------------------------------------
consensus_8679#4 ------------------------------------------------------------
consensus_8679#3 ------------------------------------------------------------
consensus_8679#0 GAAAAAAATAAAAAAAAGGCAGCATG 1577
consensus_8679#2 --------------------------
consensus_8679#1 --------------------------
consensus_8679#4 --------------------------
consensus_8679#3 --------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||