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Anopheles gambiae
cluster # 8690 cluster # 8690       Sequences # 11       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8690#0 length = 1637 sequences # 7  
consensus_8690#1 length = 1196 sequences # 2  
consensus_8690#2 length = 701 sequences # 1  
consensus_8690#3 length = 540 sequences # 1  

consensusID : consensus_8690#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1637
fasta sequence
                              [GACGATGGAGATGCGCTGAAGTCGCTTGTATGTCCAGCTACGTTCCATCCACTCGTGTTCAGTTCCGATCTATCCGTCCGTGGGGCGTGTGTGTGTACGCGCGTGCGTTGTTCTAGACCGTTGCATGTTAGATACCGACAACTAATTGCGAGAGTTTTCTAAAGGGTCCAAGGTCTCTGCGGTACGGTTTGCTAGTGACACATCCGAACCGGGTCCAGTCGTGCATGATTCACCCGGAAATCTTGAAAGGCAAACTCGCAATTTGATGTTTGCAAGAAAACCGTTGCAGCGCAAACCATCGGCGACATCATTGTCCCAACGCAATATCTCTACATTTTAGCAAACGAGTTTAGCAAAGGAAACTCTCGTGGCCAGGCCGGGTTGGGTTAGGTAGATTTCCCGGAACCCCTTCCCGCAGGCAAGGCCACCCCGGCGCCAACTACAACAAAGCTCGAGTATTTGTTCGGCTTCACGGTGCTGATTCACCGACCATAGTGTACTGGAACTGACGTGGCATCACGTTGGATGTCGATACCGAGAGTTCTGTTCTGCTTGTTGTGCCACAGTCTACCGCA-GTCTACACGATCCTTTGGTACGTCCGCTCTGGACCATCCACAGCTGGTTCGAACCGTTGAAAGGATAACACAACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACACCATCATCACCGTCAAGCTGGGTAACTGTATCGAGAGTGTTGCCGTGATCCAATCCAAATTTGTCAAGCGCGGCCCAATGACGCCAGTGCTGTATTATCTGCCGCCATCGCCACCGTGCCGATCGGTGCTGCTGCTGGCCAAGATGATCGGCGTCGAGCTGGAGCTGAAAGCGCTGAACGTGATGGAGGGCGAGCAACTGAAACCGGACTTTGTCGAGCTCAACCCACAGCACTGCATACCTACACTGGACGATCACGGGCTGGTGCTGTGGGAGAGCCGAGTGATTCTAGCGTATCTGGTATCAGCTTACGGGAAGGATGAAAACCTCTATCCGAAAGATTTTCGCTCCCGCGCCATCGTCGATCAGCGGCTGCATTTCGATCTTGGTACGCTTTACCAGCGTGTCGTCGATTACTATTTTCCAACCATCCAGCTCGGCGCTCACCTAGACCAAACGAAGAAGGCAAAGCTGGCCGAAGCGCTCGGTTGGTTCGAGGCAATGCTGAAACAGTACCAATGGTCAGCGGCCAACCACTTCACGATAGCGGACATTGCGCTGTGCGTCACGGTCTCACAAATCGAAGCATTCCAGTTCGACCTCCACCCGTACCCGCGGGTACGTGCCTGGTTGCAAAAGTGCAAAGATGAGCTACAAGGACACGGCTACAAAGAGATCAACGAAACTGGAGCAGAAACGTTAGCGGGATTGTTCCGATCAAAGTTGAAGCAGTAGTAAGGTTGGGTCTATGTGAAGTCGGATCGGGTGAAGTCGGTAATGGTTAGAAATACCACTGTTAGCTACATTTTTCTAAAGCATAAGGATGTACTTGCTCCTATTTGTCGTTGTACGCTAGTGTATAGGCAGTTTGTTATTCGAAGCCTTTTTTTAAATCTCTTAAATAAATCATATCAGACAAAGGAGCGCTTTATGCAACTCGTTC]

[+] EMBL CNS09021             [GACGATGGAGATGCGCTGAAGTCGCTTGTATGTCCAGCTACGTTCCATCCACTCGTGTTCAGTTCCGATCTATCCGTCCGTGGGGCGTGTGTGTGTACGCGCGTGCGTTGTTCTAGACCGTTGCATGTTAGATACCGACAACTAATTGCGAGAGTTTTCTAAAGGGTCCAAGGTCTCTGCGGTACGGTTTGCTAGTGACACATCCGAACCGGGTCCAGTCGTGCATGATTCACCCGGAAATCTTGAAAGGCAAACTCGCAATTTGATGTTTGCAAGAAAACCGTTGCAGCGCAAACCATCGGCGACATCATTGTCCCAACGCAATATCTCTACATTTTAGCAAACGAGTTTAGCAAAGGAAACTCTCGTGGCCAGGCCGGGTTGGGTTAGGTAGATTTCCCGGAACCCCTTCCCGCAGGCAAGGCCACCCCGGCGCCAACTACAACAAAGCTCGAGTATTTGTTCGGCTTCACGGTGCTGATTCACCGACCATAGTGTACTGGAACTGACGTGGCATCACGTTGGATGTCGATACCGAGAGTTCTGTTCTGCTTGTTGTGCCACAGTCTACCGCA GTCTACACGATCCTTTGGTACGTCCGCTCTGGACCATCCACAGCTGGTTCGAACCGTTGAAAGGATAACACAACCACCACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX615402             [                                                                                                                                                                                                                                                                                                                                                                                                                                             CCGGCGCCAACTACAACAAAGCTCGAGTATTTGTTCGGCTTCACGGTGCTGATTCACCGACCATAGTGTACTGGAACTGACGTGGCATCACGTTGGATGTCGATACCGAGAGTTCTGTTCTGCTTGTTGTGCCACAGTCTACCGCAGGTCTACACGATCCTTTGGTACGTCCGCTCTGGACCATCCACAGCTGGTTCGAACCGTTGAAAGGATAACACAACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACACCATCATCACCGTCAAGCTGGGTAACTGTATCGAGAGTGTTGCCGTGATCCAATCCAAATTTGTCAAGCGCGGCCCAATGACGCCAGTGCTGTATTATCTGCCGCCATCGCCACCGTGCCGATCGGTGCTGCTGCTGGCCAAGATGATCGGCGTCGAGCTGGAGCTGAAAGCGCTGAACGTGATGGAGGGCGAGCAACTGAAACCGGACTTTGTCGAGCTCAACCCACAGCACTGCATACCTACACTGGACGATCACGGGCTGGTGCTGTGGGAGAGCCGAGTGATTCTAGCGTATCTGGTATCAGCTTACGGGAAGGATGAAAACCTCTATCCGAAAGATTTTCGCTCCCGCGCCATCGTCGATCAGCGGCTGCATTTCGATCTTGGTACGCTTTACCAGCGTGTCGTCGATTACTATTTTCCAACCATCCAGCTCGGCGCTCACCTAGACCAAACGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX619002             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGCCCAATGACGCCAGTGCTGTATTATCTGCCGCCATCGCCACCGTGCCGATCGGTGCTGCTGCTGGCCAAGATGATCGGCGTCGAGCTGGAGCTGAAAGCGCTGAACGTGATGGAGGGCGAGCAACTGAAACCGGACTTTGTCGAGCTCAACCCACAGCACTGCATACCTACACTGGACGATCACGGGCTGGTGCTGTGGGAGAGCCGAGTGATTCTAGCGTATCTGGTATCAGCTTACGGGAAGGATGAAAACCTCTATCCGAAAGATTTTCGCTCCCGCGCCATCGTCGATCAGCGGCTGCATTTCGATCTTGGTACGCTTTACCAGCGTGTCGTCGATTACTATTTTCCAACCATCCAGCTCGGCGCTCACCTAGACCAAACGAAGAAGGCAAAGCTGGCCGAAGCGCTCGGTTGGTTCGAGGCAATGCTGAAACAGTACCAATGGTCAGCGGCCAACCACTTCACGATAGCGGACATTGCGCTGTGCGTCAC                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX608972             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCAGTGCTGTATTATCTGCCGCCATCGCCACCGTGCCGATCGGTGCTGCTGCTGGCCAAGATGATCGGCGTCGAGCTGGAGCTGAAAGCGCTGAACGTGATGGAGGGCGAGCAACTGAAACCGGACTTTGTCGAGCTCAACCCACAGCACTGCATACCTACACTGGACGATCACGGGCTGGTGCTGTGGGAGAGCCGAGTGATTCTAGCGTATCTGGTATCAGCTTACGGGAAGGATGAAAACCTCTATCCGAAAGATTTTCGCTCCCGCGCCATCGTCGATCAGCGGCTGCATTTCGATCTTGGTACGCTTTACCAGCGTGTCGTCGATTACTATTTTCCAACCATCCAGCTCGGCGCTCACCTAGACCAAACGAAGAAGGCAAAGCTGGCCGAAGCGCTCGGTTGGTTCGAGGCAATGCTGAAACAGTACCAATGGTCAGCGGCCAACCACTTCACGATAGCGGACATTGCGCTGTGCGTCACGGTCTCACAAATCGAAGCATTCCAGTTCGACCTCCACCCGTACCCGCGGGTACGTGCCTGGTTGCAAAAGTGCAAAGATGAGCTACAAGGACACGGCTACAAAGAGATCA                                                                                                                                                                                                                                                                        ]
[+] EMBL AF071161             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTGCTGTATTATCTGCCGCCATCGCCACCGTGCCGATCGGTGCTGCTGCTGGCCAAGATGATCGGCGTCGAGCTGGAGCTGAAAGCGCTGAACGTGATGGAGGGCGAGCAACTGAAACCGGACTTTGTCGAGCTCAACCCACAGCACTGCATACCTACACTGGACGATCACGGGCTGGTGCTGTGGGAGAGCCGAGTGATTCTAGCGTATCTGGTATCAGCTTACGGGAAGGATGAAAACCTCTATCCGAAAGATTTTCGCTCCCGCGCCATCGTCGATCAGCGGCTGCATTTCGATCTTGGTACGCTTTACCAGCGTGTCGTCGATTACTATTTTCCAACCATCCAGCTCGGCGCTCACCTAGACCAAACGAAGAAGGCAAAGCTGGCCGAAGCGCTCGGTTGGTTCGAGGCAATGCTGAAACAGTACCAATGGTCAGCGGCCAACCACTTCACGATAGCGGACATTGCGCTGTGCGTCACGGTCTCACAAATCGAAGCATTCCAGTTCGACCTCCACCCGTACCCGCGGGTACGTGCCTGGTTGCAAAAGTGCAAAGATGAGCTACAAGGACACGGCTACAAAGAGATCAACGAAACTGGAGCAGAAACGTTAGCGGGATTGTTCCGATCAAAGTT                                                                                                                                                                                                                          ]
[+] EMBL BX612529             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGCCAAGATGATCGGCGTCGAGCTGGAGCTGAAAGCGCTGAACGTGATGGAGGGCGAGCAACTGAAACCGGACTTTGTCGAGCTCAACCCACAGCACGGCATACCTACACTGGACGAACACGGGCTGGTGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CNS09022             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         gatTTTTCGCTCCCGCGCCATCGTCGATCAGCGGCTGCATTTCGATCTTGGTACGCTTTACCAGCGTGTCGTCGATTACTATTTTCCAACCATCCAGCTCGGCGCTCACCTAGACCAAACGAAGAAGGCAAAGCTGGCCGAAGCGCTCGGTTGGTTCGAGGCAATGCTGAAACAGTACCAATGGTCAGCGGCCAACCACTTCACGATAGCGGACATTGCGCTGTGCGTCACGTTCTCACAAATCGAAGCATTCCAGTTCGACCTCCACCCGTACCCGCGGGTACGTGCCTGGTTGCAAAAGTGCAAAGATGAGCTACAAGGACACGGCTACAAAGAGATCAACGAAACTGGAGCAGAAACGTTAGCGGGATTGTTCCGGTCAAAGTTGAAGCAGTAGTAAGGTTGGGTCTATGTGAAGTCGGATCGGGTGAAGTCGGTAATGGTTAGAAATACCACTGTTAGCTACATTTTTCTAAAGCATAAGGATGTACTTGCTCCTATTTGTCGTTGTACGCTAGTGTATAGGCAGTTTGTTATTCGAAGCCTTTTTTTAAATCTCTTAAATAAATCATATCAGACAAAGGAGCGCTTTATGCAACTCGTTC]


>consensus_8690#0 GACGATGGAGATGCGCTGAAGTCGCTTGTATGTCCAGCTACGTTCCATCCACTCGTGTTC AGTTCCGATCTATCCGTCCGTGGGGCGTGTGTGTGTACGCGCGTGCGTTGTTCTAGACCG TTGCATGTTAGATACCGACAACTAATTGCGAGAGTTTTCTAAAGGGTCCAAGGTCTCTGC GGTACGGTTTGCTAGTGACACATCCGAACCGGGTCCAGTCGTGCATGATTCACCCGGAAA TCTTGAAAGGCAAACTCGCAATTTGATGTTTGCAAGAAAACCGTTGCAGCGCAAACCATC GGCGACATCATTGTCCCAACGCAATATCTCTACATTTTAGCAAACGAGTTTAGCAAAGGA AACTCTCGTGGCCAGGCCGGGTTGGGTTAGGTAGATTTCCCGGAACCCCTTCCCGCAGGC AAGGCCACCCCGGCGCCAACTACAACAAAGCTCGAGTATTTGTTCGGCTTCACGGTGCTG ATTCACCGACCATAGTGTACTGGAACTGACGTGGCATCACGTTGGATGTCGATACCGAGA GTTCTGTTCTGCTTGTTGTGCCACAGTCTACCGCAGTCTACACGATCCTTTGGTACGTCC GCTCTGGACCATCCACAGCTGGTTCGAACCGTTGAAAGGATAACACAACCACCACCACCA CCACCACCACCACCACCACCACCACCACCACCACACCATCATCACCGTCAAGCTGGGTAA CTGTATCGAGAGTGTTGCCGTGATCCAATCCAAATTTGTCAAGCGCGGCCCAATGACGCC AGTGCTGTATTATCTGCCGCCATCGCCACCGTGCCGATCGGTGCTGCTGCTGGCCAAGAT GATCGGCGTCGAGCTGGAGCTGAAAGCGCTGAACGTGATGGAGGGCGAGCAACTGAAACC GGACTTTGTCGAGCTCAACCCACAGCACTGCATACCTACACTGGACGATCACGGGCTGGT GCTGTGGGAGAGCCGAGTGATTCTAGCGTATCTGGTATCAGCTTACGGGAAGGATGAAAA CCTCTATCCGAAAGATTTTCGCTCCCGCGCCATCGTCGATCAGCGGCTGCATTTCGATCT TGGTACGCTTTACCAGCGTGTCGTCGATTACTATTTTCCAACCATCCAGCTCGGCGCTCA CCTAGACCAAACGAAGAAGGCAAAGCTGGCCGAAGCGCTCGGTTGGTTCGAGGCAATGCT GAAACAGTACCAATGGTCAGCGGCCAACCACTTCACGATAGCGGACATTGCGCTGTGCGT CACGGTCTCACAAATCGAAGCATTCCAGTTCGACCTCCACCCGTACCCGCGGGTACGTGC CTGGTTGCAAAAGTGCAAAGATGAGCTACAAGGACACGGCTACAAAGAGATCAACGAAAC TGGAGCAGAAACGTTAGCGGGATTGTTCCGATCAAAGTTGAAGCAGTAGTAAGGTTGGGT CTATGTGAAGTCGGATCGGGTGAAGTCGGTAATGGTTAGAAATACCACTGTTAGCTACAT TTTTCTAAAGCATAAGGATGTACTTGCTCCTATTTGTCGTTGTACGCTAGTGTATAGGCA GTTTGTTATTCGAAGCCTTTTTTTAAATCTCTTAAATAAATCATATCAGACAAAGGAGCG CTTTATGCAACTCGTTC



consensusID : consensus_8690#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1196
fasta sequence
                              [CCGATCCGTCCGTGGGGCGTGTGTGTGTACGCGCGCGCGTTGTTCTAGACCGTTGCATGTTAGATACCGACAACTAATTGCGAGAGTTTTCTAAAGGGTCCAAGGTCTCTGCGGTACGGTTTGCTAGTGACACATCCGAACCGGGTCCAGTCGTGCATGATTCACCCCTGGAAATCTTGAAAGGCAAACTCGCAAATTTGATGTTTGCAAGAAAACCGTTGCAGCGCAAACCATCGGCGACATCATTGTCCCAACGCAATATCTCTACATTTTAGCAAACGAGTTTAGCAAAGGAAACTCTCGTGGCCAGGCCGGGTTGGGTTTGGTAGATTTCCCGGAACCCCTTCCCGCAGGCAAGGCCACCCCCGGCGCCAACTACAACAAAGCTCGAGTATTTGTTCGGCTTCACGGTGCTGATTCACCGACCATAGTGTACTGGAACTGACGTGGCATCACGTTGGATGTCGTTACCGAGAGTTCTGTTCTGCTTGTTGTGCCACAGTCTACCGCAGGTCTACACGATCCTTTGGTACGTCCGCTCTGGACCATCCTCAGCTGGTTGGAACCGTTGAAAGGATAACACAACCACCACCACCGCCACCACACCATCATCACCGTCAAGCTGGGTAACTGTAATCGAGAGTGTTGCCGTGATCCAATCCAAATTTGTCAAGCGCGGGCCAATGACGCCAGTGCTGTATTATCTGCCGCCATCGCCACCGTGCCGATCGGTGCTGCTGCTGGCCAAGATGATCGGCGTCGAGCTGGAGCTGAAAGCGCTGAACGTGATGGAGGGCGAGCAATTGAAACCGGACTTTGTCGAGCTCAACCCACAGCACTGCATACCGACACTGGACGATCACGGGCTGGTGCTGTGGGAGAGCCGAGTGATTCTTGCGTATCTGGTATCAGCTTACGGGAAAGATGAAAACCTCTATCCGAAAGATTTTCGCTCCCGCGCCATCGTCGATCAGCGGCTGCATTTCGATCTTGGTACGCTTTACCAGCGTGTCGTCGATTACTATTTTCCAACCATCCAGCTTGGCGCTCACCTAGACCAAACGAAGAAGGCAAAGCTGGCCGAAGCGCTCGGTTGGTTCGAGGCAATGCTGAAACAGTACCAATGGTCAGCGGCCAACCACTTCACGATAGCGGACATTGCGCTGTGCGTCACGGTCTCACAAATCGAAGCATTC]

[+] EMBL BM636995             [CCGATCCGTCCGTGGGGCGTGTGTGTGTACGCGCGCGCGTTGTTCTAGACCGTTGCATGTTAGATACCGACAACTAATTGCGAGAGTTTTCTAAAGGGTCCAAGGTCTCTGCGGTACGGTTTGCTAGTGACACATCCGAACCGGGTCCAGTCGTGCATGATTCACCCCTGGAAATCTTGAAAGGCAAACTCGCAAATTTGATGTTTGCAAGAAAACCGTTGCAGCGCAAACCATCGGCGACATCATTGTCCCAACGCAATATCTCTACATTTTAGCAAACGAGTTTAGCAAAGGAAACTCTCGTGGCCAGGCCGGGTTGGGTTTGGTAGATTTCCCGGAACCCCTTCCCGCAGGCAAGGCCACCCCCGGCGCCAACTACAACAAAGCTCGAGTATTTGTTCGGCTTCACGGTGCTGATTCACCGACCATAGTGTACTGGAACTGACGTGGCATCACGTTGGATGTCGTTACCGAGAGTTCTGTTCTGCTTGTTGTGCCACAGTCTACCGCAGGTCTACACGATCCTTTGGTACGTCCGCTCTGGACCATCCTCAGCTGGTTGGAACCGTTGAAAGGATAACACAACCACCACCACCGCCACCACACCATCATCACCGTCAAGCTGGGTAACTGTAATCGAGAGTGTTGCCGTGATCCAATCCAAATTTGTCAAGCGCGGGCCAATGACGCCAGTGCTGTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM602701             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ccgGTCTACCGCAGGTCTACACGATCCTTTGGTACGTCCGCTCTGGACCATCCACAGCTGGTTGGAACCGTTGAAAGGATAACACAACCACCACCACCGCCACCACACCATCATCACCGTCAAGCTGGGTAACTGT ATCGAGAGTGTTGCCGTGATCCAATCCAAATTTGTCAAGCGCGGCCCAATGACTCCAGTGCTGTATTATCTGCCGCCATCGCCACCGTGCCGATCGGTGCTGCTGCTGGCCAAGATGATCGGCGTCGAGCTGGAGCTGAAAGCGCTGAACGTGATGGAGGGCGAGCAATTGAAACCGGACTTTGTCGAGCTCAACCCACAGCACTGCATACCGACACTGGACGATCACGGGCTGGTGCTGTGGGAGAGCCGAGTGATTCTTGCGTATCTGGTATCAGCTTACGGGAAAGATGAAAACCTCTATCCGAAAGATTTTCGCTCCCGCGCCATCGTCGATCAGCGGCTGCATTTCGATCTTGGTACGCTTTACCAGCGTGTCGTCGATTACTATTTTCCAACCATCCAGCTTGGCGCTCACCTAGACCAAACGAAGAAGGCAAAGCTGGCCGAAGCGCTCGGTTGGTTCGAGGCAATGCTGAAACAGTACCAATGGTCAGCGGCCAACCACTTCACGATAGCGGACATTGCGCTGTGCGTCACGGTCTCACAAATCGAAGCATTC]


>consensus_8690#1 CCGATCCGTCCGTGGGGCGTGTGTGTGTACGCGCGCGCGTTGTTCTAGACCGTTGCATGT TAGATACCGACAACTAATTGCGAGAGTTTTCTAAAGGGTCCAAGGTCTCTGCGGTACGGT TTGCTAGTGACACATCCGAACCGGGTCCAGTCGTGCATGATTCACCCCTGGAAATCTTGA AAGGCAAACTCGCAAATTTGATGTTTGCAAGAAAACCGTTGCAGCGCAAACCATCGGCGA CATCATTGTCCCAACGCAATATCTCTACATTTTAGCAAACGAGTTTAGCAAAGGAAACTC TCGTGGCCAGGCCGGGTTGGGTTTGGTAGATTTCCCGGAACCCCTTCCCGCAGGCAAGGC CACCCCCGGCGCCAACTACAACAAAGCTCGAGTATTTGTTCGGCTTCACGGTGCTGATTC ACCGACCATAGTGTACTGGAACTGACGTGGCATCACGTTGGATGTCGTTACCGAGAGTTC TGTTCTGCTTGTTGTGCCACAGTCTACCGCAGGTCTACACGATCCTTTGGTACGTCCGCT CTGGACCATCCTCAGCTGGTTGGAACCGTTGAAAGGATAACACAACCACCACCACCGCCA CCACACCATCATCACCGTCAAGCTGGGTAACTGTAATCGAGAGTGTTGCCGTGATCCAAT CCAAATTTGTCAAGCGCGGGCCAATGACGCCAGTGCTGTATTATCTGCCGCCATCGCCAC CGTGCCGATCGGTGCTGCTGCTGGCCAAGATGATCGGCGTCGAGCTGGAGCTGAAAGCGC TGAACGTGATGGAGGGCGAGCAATTGAAACCGGACTTTGTCGAGCTCAACCCACAGCACT GCATACCGACACTGGACGATCACGGGCTGGTGCTGTGGGAGAGCCGAGTGATTCTTGCGT ATCTGGTATCAGCTTACGGGAAAGATGAAAACCTCTATCCGAAAGATTTTCGCTCCCGCG CCATCGTCGATCAGCGGCTGCATTTCGATCTTGGTACGCTTTACCAGCGTGTCGTCGATT ACTATTTTCCAACCATCCAGCTTGGCGCTCACCTAGACCAAACGAAGAAGGCAAAGCTGG CCGAAGCGCTCGGTTGGTTCGAGGCAATGCTGAAACAGTACCAATGGTCAGCGGCCAACC ACTTCACGATAGCGGACATTGCGCTGTGCGTCACGGTCTCACAAATCGAAGCATTC



consensusID : consensus_8690#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 701
fasta sequence
                              [CCGAGGTTANCTGGACATCCACAGCTGGTTGGAACGTTGAAAGGATAACACAAACACCACCACCGCACACACCATCATCACCGTCAAGCTGGGTAACTGTATCGAGAGTGTTGCCGTGATACCAATCCAAATTTGTCAAGCGCGGCCCAATGACTCCAGTGCTGTATTATCTGCTGCCATCGCCACCGTGCCGATCGGTGCTGCTGCTGGCCAAGATGATCGGCGTCGANCTGGAGCTGAAAGCGCTGAACGTGATGGAGGGCGANCAATTGAAACCGGACTTTGTCGAGCTCAACCACAGCACTGCATACCGACACTGGACGATCACGGTGCTGGTGCTGTGGGAGAGCCGAGTGATTCTTGCGTATCTGGTATCAGCGTTACGGGAAAGATGAGAAACCTCTATCCGAAAGATTTTCGGTCCCGCGCCATCGTCGATCAGCGGCTGCATTTCGATCTTGGTACGCTTTACCAGCGTGTCGTCGATTACTATTTACCAACATCCAGCTTGGCGCTCACTAGACCAAAGAAGGAAGGCAAGCTGGCCGACAGCGCTCGGTTGGTTCGAGGTCAACTGCTGAAACAGGTACCAATGGGTCAGGCGGCAAACCAACTTCACGCATCAGCGGACATTGGGGCTGTGCGTCACGGGTCTCACAAATCGACAGCATTCCAGTTCGACCTCGACCGTACCGCGGGTA]

[+] EMBL AL695497             [CCGAGGTTANCTGGACATCCACAGCTGGTTGGAACGTTGAAAGGATAACACAAACACCACCACCGCACACACCATCATCACCGTCAAGCTGGGTAACTGTATCGAGAGTGTTGCCGTGATACCAATCCAAATTTGTCAAGCGCGGCCCAATGACTCCAGTGCTGTATTATCTGCTGCCATCGCCACCGTGCCGATCGGTGCTGCTGCTGGCCAAGATGATCGGCGTCGANCTGGAGCTGAAAGCGCTGAACGTGATGGAGGGCGANCAATTGAAACCGGACTTTGTCGAGCTCAACCACAGCACTGCATACCGACACTGGACGATCACGGTGCTGGTGCTGTGGGAGAGCCGAGTGATTCTTGCGTATCTGGTATCAGCGTTACGGGAAAGATGAGAAACCTCTATCCGAAAGATTTTCGGTCCCGCGCCATCGTCGATCAGCGGCTGCATTTCGATCTTGGTACGCTTTACCAGCGTGTCGTCGATTACTATTTACCAACATCCAGCTTGGCGCTCACTAGACCAAAGAAGGAAGGCAAGCTGGCCGACAGCGCTCGGTTGGTTCGAGGTCAACTGCTGAAACAGGTACCAATGGGTCAGGCGGCAAACCAACTTCACGCATCAGCGGACATTGGGGCTGTGCGTCACGGGTCTCACAAATCGACAGCATTCCAGTTCGACCTCGACCGTACCGCGGGTA]


>consensus_8690#2 CCGAGGTTANCTGGACATCCACAGCTGGTTGGAACGTTGAAAGGATAACACAAACACCAC CACCGCACACACCATCATCACCGTCAAGCTGGGTAACTGTATCGAGAGTGTTGCCGTGAT ACCAATCCAAATTTGTCAAGCGCGGCCCAATGACTCCAGTGCTGTATTATCTGCTGCCAT CGCCACCGTGCCGATCGGTGCTGCTGCTGGCCAAGATGATCGGCGTCGANCTGGAGCTGA AAGCGCTGAACGTGATGGAGGGCGANCAATTGAAACCGGACTTTGTCGAGCTCAACCACA GCACTGCATACCGACACTGGACGATCACGGTGCTGGTGCTGTGGGAGAGCCGAGTGATTC TTGCGTATCTGGTATCAGCGTTACGGGAAAGATGAGAAACCTCTATCCGAAAGATTTTCG GTCCCGCGCCATCGTCGATCAGCGGCTGCATTTCGATCTTGGTACGCTTTACCAGCGTGT CGTCGATTACTATTTACCAACATCCAGCTTGGCGCTCACTAGACCAAAGAAGGAAGGCAA GCTGGCCGACAGCGCTCGGTTGGTTCGAGGTCAACTGCTGAAACAGGTACCAATGGGTCA GGCGGCAAACCAACTTCACGCATCAGCGGACATTGGGGCTGTGCGTCACGGGTCTCACAA ATCGACAGCATTCCAGTTCGACCTCGACCGTACCGCGGGTA



consensusID : consensus_8690#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 540
fasta sequence
                              [GCCCGAGGTTATNGAGGGCGAGCACTGAAACCGGACTTTGTCGAGCTCAACCCACAGCACTGTCGATACCTACACGTGGACGATCACGGTGCTGGTGCTGTGTGGAGAGACCGAGTGATTCTAGCGTATCTGGTATCAGCTTACGTGGAAAGGATGAAAACCTCTATCCGAAAGATTTTCGCGTCCCTGCTGCCATCGTCGAGTCAGCGGCTGCGGTTTCGATGTTGGTACGCTTTACCAGACTGTGTCGTCGATTACTATTTTCCAACCATCCAGCTCGGCGCTCACCTAGACCAAACGAATCAAGGCAAATGCTGGCCGAAGCGCTCGGNNTGGTTCGAGGCAATGCTGAAACAGTACCAAGTGGTCAGCGGNCAACCACTTCACGATAGCGGACATTGNGCTGTGCGTCACGGTCTCACATAATCGAATGCATTCCAGTTCGACTCCAACCGTACCGCGGGTACGTGCCTGGTTGCAACACAGTGCAAAGATGANCTACAAGGACACGGCTACAAAGAGCATCAAGCGAAACTGGGA]

[+] EMBL AL931877             [GCCCGAGGTTATNGAGGGCGAGCACTGAAACCGGACTTTGTCGAGCTCAACCCACAGCACTGTCGATACCTACACGTGGACGATCACGGTGCTGGTGCTGTGTGGAGAGACCGAGTGATTCTAGCGTATCTGGTATCAGCTTACGTGGAAAGGATGAAAACCTCTATCCGAAAGATTTTCGCGTCCCTGCTGCCATCGTCGAGTCAGCGGCTGCGGTTTCGATGTTGGTACGCTTTACCAGACTGTGTCGTCGATTACTATTTTCCAACCATCCAGCTCGGCGCTCACCTAGACCAAACGAATCAAGGCAAATGCTGGCCGAAGCGCTCGGNNTGGTTCGAGGCAATGCTGAAACAGTACCAAGTGGTCAGCGGNCAACCACTTCACGATAGCGGACATTGNGCTGTGCGTCACGGTCTCACATAATCGAATGCATTCCAGTTCGACTCCAACCGTACCGCGGGTACGTGCCTGGTTGCAACACAGTGCAAAGATGANCTACAAGGACACGGCTACAAAGAGCATCAAGCGAAACTGGGA]


>consensus_8690#3 GCCCGAGGTTATNGAGGGCGAGCACTGAAACCGGACTTTGTCGAGCTCAACCCACAGCAC TGTCGATACCTACACGTGGACGATCACGGTGCTGGTGCTGTGTGGAGAGACCGAGTGATT CTAGCGTATCTGGTATCAGCTTACGTGGAAAGGATGAAAACCTCTATCCGAAAGATTTTC GCGTCCCTGCTGCCATCGTCGAGTCAGCGGCTGCGGTTTCGATGTTGGTACGCTTTACCA GACTGTGTCGTCGATTACTATTTTCCAACCATCCAGCTCGGCGCTCACCTAGACCAAACG AATCAAGGCAAATGCTGGCCGAAGCGCTCGGNNTGGTTCGAGGCAATGCTGAAACAGTAC CAAGTGGTCAGCGGNCAACCACTTCACGATAGCGGACATTGNGCTGTGCGTCACGGTCTC ACATAATCGAATGCATTCCAGTTCGACTCCAACCGTACCGCGGGTACGTGCCTGGTTGCA ACACAGTGCAAAGATGANCTACAAGGACACGGCTACAAAGAGCATCAAGCGAAACTGGGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8690#1      ------------------------------------------------------------
consensus_8690#2      ------------------------------------------------------------
consensus_8690#0      GACGATGGAGATGCGCTGAAGTCGCTTGTATGTCCAGCTACGTTCCATCCACTCGTGTTC 60
consensus_8690#3      ------------------------------------------------------------
                                                                                  

consensus_8690#1      --------CCGATCCGTCCGTGGGGCGTGTGTGTGTACGCGCGCGCGTTGTTCTAGACCG 52
consensus_8690#2      ------------------------------------------------------------
consensus_8690#0      AGTTCCGATCTATCCGTCCGTGGGGCGTGTGTGTGTACGCGCGTGCGTTGTTCTAGACCG 120
consensus_8690#3      ------------------------------------------------------------
                                                                                  

consensus_8690#1      TTGCATGTTAGATACCGACAACTAATTGCGAGAGTTTTCTAAAGGGTCCAAGGTCTCTGC 112
consensus_8690#2      ------------------------------------------------------------
consensus_8690#0      TTGCATGTTAGATACCGACAACTAATTGCGAGAGTTTTCTAAAGGGTCCAAGGTCTCTGC 180
consensus_8690#3      ------------------------------------------------------------
                                                                                  

consensus_8690#1      GGTACGGTTTGCTAGTGACACATCCGAACCGGGTCCAGTCGTGCATGATTCACCCCTGGA 172
consensus_8690#2      ------------------------------------------------------------
consensus_8690#0      GGTACGGTTTGCTAGTGACACATCCGAACCGGGTCCAGTCGTGCATGATTCACCC--GGA 238
consensus_8690#3      ------------------------------------------------------------
                                                                                  

consensus_8690#1      AATCTTGAAAGGCAAACTCGCAAATTTGATGTTTGCAAGAAAACCGTTGCAGCGCAAACC 232
consensus_8690#2      ------------------------------------------------------------
consensus_8690#0      AATCTTGAAAGGCAAACTCGCAA-TTTGATGTTTGCAAGAAAACCGTTGCAGCGCAAACC 297
consensus_8690#3      ------------------------------------------------------------
                                                                                  

consensus_8690#1      ATCGGCGACATCATTGTCCCAACGCAATATCTCTACATTTTAGCAAACGAGTTTAGCAAA 292
consensus_8690#2      ------------------------------------------------------------
consensus_8690#0      ATCGGCGACATCATTGTCCCAACGCAATATCTCTACATTTTAGCAAACGAGTTTAGCAAA 357
consensus_8690#3      ------------------------------------------------------------
                                                                                  

consensus_8690#1      GGAAACTCTCGTGGCCAGGCCGGGTTGGGTTTGGTAGATTTCCCGGAACCCCTTCCCGCA 352
consensus_8690#2      ------------------------------------------------------------
consensus_8690#0      GGAAACTCTCGTGGCCAGGCCGGGTTGGGTTAGGTAGATTTCCCGGAACCCCTTCCCGCA 417
consensus_8690#3      ------------------------------------------------------------
                                                                                  

consensus_8690#1      GGCAAGGCCACCCCCGGCGCCAACTACAACAAAGCTCGAGTATTTGTTCGGCTTCACGGT 412
consensus_8690#2      ------------------------------------------------------------
consensus_8690#0      GGCAAGGCCACCCC-GGCGCCAACTACAACAAAGCTCGAGTATTTGTTCGGCTTCACGGT 476
consensus_8690#3      ------------------------------------------------------------
                                                                                  

consensus_8690#1      GCTGATTCACCGACCATAGTGTACTGGAACTGACGTGGCATCACGTTGGATGTCGTTACC 472
consensus_8690#2      ------------------------------------------------------------
consensus_8690#0      GCTGATTCACCGACCATAGTGTACTGGAACTGACGTGGCATCACGTTGGATGTCGATACC 536
consensus_8690#3      ------------------------------------------------------------
                                                                                  

consensus_8690#1      GAGAGTTCTGTTCTGCTTGTTGTGCCACAGTCTACCGCAGGTCTACACGATCCTTTGGTA 532
consensus_8690#2      ---------------------------------------------------------CCG 3
consensus_8690#0      GAGAGTTCTGTTCTGCTTGTTGTGCCACAGTCTACCGCAG-TCTACACGATCCTTTGGTA 595
consensus_8690#3      ------------------------------------------------------------
                                                                                  

consensus_8690#1      CGTCCGCTCTGGACCATCCTCAGCTGGTTGGAACCGTTGAAAGGATAACACAACCACCAC 592
consensus_8690#2      AGGTTAN-CTGGAC-ATCCACAGCTGGTTGGAAC-GTTGAAAGGATAACACAAACACCAC 60
consensus_8690#0      CGTCCGCTCTGGACCATCCACAGCTGGTTCGAACCGTTGAAAGGATAACACAACCACCAC 655
consensus_8690#3      ------------------------------------------------------------
                                                                                  

consensus_8690#1      CACCGCCA---------------------------CCACACCATCATCACCGTCAAGCTG 625
consensus_8690#2      CACCGC-----------------------------ACACACCATCATCACCGTCAAGCTG 91
consensus_8690#0      CACCACCACCACCACCACCACCACCACCACCACCACCACACCATCATCACCGTCAAGCTG 715
consensus_8690#3      ------------------------------------------------------------
                                                                                  

consensus_8690#1      GGTAACTGTAATCGAGAGTGTTGCCGTGAT-CCAATCCAAATTTGTCAAGCGCGGGCCAA 684
consensus_8690#2      GGTAACTGTA-TCGAGAGTGTTGCCGTGATACCAATCCAAATTTGTCAAGCGCGGCCCAA 150
consensus_8690#0      GGTAACTGTA-TCGAGAGTGTTGCCGTGAT-CCAATCCAAATTTGTCAAGCGCGGCCCAA 773
consensus_8690#3      ------------------------------------------------------------
                                                                                  

consensus_8690#1      TGACGCCAGTGCTGTATTATCTGCCGCCATCGCCACCGTGCCGATCGGTGCTGCTGCTGG 744
consensus_8690#2      TGACTCCAGTGCTGTATTATCTGCTGCCATCGCCACCGTGCCGATCGGTGCTGCTGCTGG 210
consensus_8690#0      TGACGCCAGTGCTGTATTATCTGCCGCCATCGCCACCGTGCCGATCGGTGCTGCTGCTGG 833
consensus_8690#3      ------------------------------------------------------------
                                                                                  

consensus_8690#1      CCAAGATGATCGGCGTCGAGCTGGAGCTGAAAGCGCTGAACGTGATGGAGGGCGAGCAAT 804
consensus_8690#2      CCAAGATGATCGGCGTCGANCTGGAGCTGAAAGCGCTGAACGTGATGGAGGGCGANCAAT 270
consensus_8690#0      CCAAGATGATCGGCGTCGAGCTGGAGCTGAAAGCGCTGAACGTGATGGAGGGCGAGCAAC 893
consensus_8690#3      ----------------------------------GCCCGAGGTTATNGAGGGCGAGCA-C 25
                                                        **   * ** ** ******** **  

consensus_8690#1      TGAAACCGGACTTTGTCGAGCTCAACCCACAGCACTGC--ATACCGACAC-TGGACGATC 861
consensus_8690#2      TGAAACCGGACTTTGTCGAGCTCAACC-ACAGCACTGC--ATACCGACAC-TGGACGATC 326
consensus_8690#0      TGAAACCGGACTTTGTCGAGCTCAACCCACAGCACTGC--ATACCTACAC-TGGACGATC 950
consensus_8690#3      TGAAACCGGACTTTGTCGAGCTCAACCCACAGCACTGTCGATACCTACACGTGGACGATC 85
                      *************************** *********   ***** **** *********

consensus_8690#1      ACGG-GCTGGTGCTGTG-GGAGAG-CCGAGTGATTCTTGCGTATCTGGTATCAGC-T-TA 916
consensus_8690#2      ACGGTGCTGGTGCTGTG-GGAGAG-CCGAGTGATTCTTGCGTATCTGGTATCAGCGT-TA 383
consensus_8690#0      ACGG-GCTGGTGCTGTG-GGAGAG-CCGAGTGATTCTAGCGTATCTGGTATCAGC-T-TA 1005
consensus_8690#3      ACGGTGCTGGTGCTGTGTGGAGAGACCGAGTGATTCTAGCGTATCTGGTATCAGCTTACG 145
                      **** ************ ****** ************ ***************** *   

consensus_8690#1      CGGGAAAGATGA-AAACCTCTATCCGAAAGATTTTCGC--TCCCGC-GCCATCGTCGA-T 971
consensus_8690#2      CGGGAAAGATGAGAAACCTCTATCCGAAAGATTTTCGG--TCCCGC-GCCATCGTCGA-T 439
consensus_8690#0      CGGGAAGGATGA-AAACCTCTATCCGAAAGATTTTCGC--TCCCGC-GCCATCGTCGA-T 1060
consensus_8690#3      TGGAAAGGATGA-AAACCTCTATCCGAAAGATTTTCGCGTCCCTGCTGCCATCGTCGAGT 204
                       ** ** ***** ************************    ** ** *********** *

consensus_8690#1      CAGCGGCTGCA-TTTCGATCTTGGTACGCTTTACCAG--CGTGTCGTCGATTACTATTTT 1028
consensus_8690#2      CAGCGGCTGCA-TTTCGATCTTGGTACGCTTTACCAG--CGTGTCGTCGATTACTATTTA 496
consensus_8690#0      CAGCGGCTGCA-TTTCGATCTTGGTACGCTTTACCAG--CGTGTCGTCGATTACTATTTT 1117
consensus_8690#3      CAGCGGCTGCGGTTTCGATGTTGGTACGCTTTACCAGACTGTGTCGTCGATTACTATTTT 264
                      **********  ******* *****************   ******************* 

consensus_8690#1      CCAACCATCCAGCTTGGCGCTCACCTAGACCAAACGAAG-AAGGCAAA-GCTGGCCGA-A 1085
consensus_8690#2      CCAAC-ATCCAGCTTGGCGCTCAC-TAGACCAAAGAAGG-AAGGCAA--GCTGGCCGACA 551
consensus_8690#0      CCAACCATCCAGCTCGGCGCTCACCTAGACCAAACGAAG-AAGGCAAA-GCTGGCCGA-A 1174
consensus_8690#3      CCAACCATCCAGCTCGGCGCTCACCTAGACCAAACGAATCAAGGCAAATGCTGGCCGA-A 323
                      ***** ******** ********* *********  *   *******  ********* *

consensus_8690#1      GCGCTCGGTT-GGTTCGAGGCAA--TGCTGAAACAG-TACCAATGG-TCAG-CGGCCAAC 1139
consensus_8690#2      GCGCTCGGTT-GGTTCGAGGTCAACTGCTGAAACAGGTACCAATGGGTCAGGCGGCAAAC 610
consensus_8690#0      GCGCTCGGTT-GGTTCGAGGCAA--TGCTGAAACAG-TACCAATGG-TCAG-CGGCCAAC 1228
consensus_8690#3      GCGCTCGGNNTGGTTCGAGGCAA--TGCTGAAACAG-TACCAAGTGGTCAG-CGGNCAAC 379
                      ********   *********  *  *********** ******  * **** ***  ***

consensus_8690#1      CA-CTTCACGA--TAGCGGACATTGCG-CTGTGCGTCACGG-TCTCACA-AATCGA-AGC 1192
consensus_8690#2      CAACTTCACGCATCAGCGGACATTGGGGCTGTGCGTCACGGGTCTCACA-AATCGACAGC 669
consensus_8690#0      CA-CTTCACGA--TAGCGGACATTGCG-CTGTGCGTCACGG-TCTCACA-AATCGA-AGC 1281
consensus_8690#3      CA-CTTCACGA--TAGCGGACATTGNG-CTGTGCGTCACGG-TCTCACATAATCGAATGC 434
                      ** *******    *********** * ************* ******* ******  **

consensus_8690#1      ATTC-------------------------------------------------------- 1196
consensus_8690#2      ATTCCAGTTCGACCTCGACC-GTACC-GCGGGTA-------------------------- 701
consensus_8690#0      ATTCCAGTTCGACCTCCACCCGTACCCGCGGGTACGTGCCTGGTTGCAAAAGTGCAAAGA 1341
consensus_8690#3      ATTCCAGTTCGACTCCAACC-GTACC-GCGGGTACGTGCCTGGTTGCAACACAGTGCAAA 492
                      ****                                                        

consensus_8690#1      ------------------------------------------------------------
consensus_8690#2      ------------------------------------------------------------
consensus_8690#0      TGAGCTACAAGGACACGGCTACAAAGAGATCAACGAAACTGGAGCAGAAACGTTAGCGGG 1401
consensus_8690#3      GATGANCTACAAGGACACGGCTACAAAGAGCATCAAGCGAAACTGGGA------------ 540
                                                                                  

consensus_8690#1      ------------------------------------------------------------
consensus_8690#2      ------------------------------------------------------------
consensus_8690#0      ATTGTTCCGATCAAAGTTGAAGCAGTAGTAAGGTTGGGTCTATGTGAAGTCGGATCGGGT 1461
consensus_8690#3      ------------------------------------------------------------
                                                                                  

consensus_8690#1      ------------------------------------------------------------
consensus_8690#2      ------------------------------------------------------------
consensus_8690#0      GAAGTCGGTAATGGTTAGAAATACCACTGTTAGCTACATTTTTCTAAAGCATAAGGATGT 1521
consensus_8690#3      ------------------------------------------------------------
                                                                                  

consensus_8690#1      ------------------------------------------------------------
consensus_8690#2      ------------------------------------------------------------
consensus_8690#0      ACTTGCTCCTATTTGTCGTTGTACGCTAGTGTATAGGCAGTTTGTTATTCGAAGCCTTTT 1581
consensus_8690#3      ------------------------------------------------------------
                                                                                  

consensus_8690#1      --------------------------------------------------------
consensus_8690#2      --------------------------------------------------------
consensus_8690#0      TTTAAATCTCTTAAATAAATCATATCAGACAAAGGAGCGCTTTATGCAACTCGTTC 1637
consensus_8690#3      --------------------------------------------------------
                                                                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)