These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8710#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1161 fasta sequence [TGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCTATCATCAAAACACGACGCACCAATCGATTGAAGGATCAGCTAATCCCCAACTCGGCGTGGAAGGATTACTCCTCCAACACCATACTACGCGTTCGATAACTTTGAGCCAGAGTCGAAGCACCACAAGGGGCGCTCCTCCGACCGCGGCTACAGCAATGGCAACAGTCGGCAAACCACGCTGCAGATGTCGCACTCCCCCAACAAGTCGCAGTACTACGAGATTGATCGTACGTGATGGTGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCGCGCCACGGATACGATCGTACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCACCAGCAGCAGCAACAGCAACATCAACAGCAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTTATAGGGAAAACCTGGGGATGACAGGGGTTCAGTTTGTAACGCATAAGNCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAACCATTCCAAAACGTGCAAAGGATATAAAAAAAAACAAGAAGTAAATACTCCTCAGACATGTCTCCTCAGAATGGGGAATGAGCAGCGCAATGAAACGGCGCACATTCAACCCACTGTATATAATATGTTTTTACCCATTTCTTTTTTGTTTCATTTCCATTTTTAAACCCCCTCACACTACTCCTCCAGCATTGTTTGCGTTGTTTTTAATAAAGAAAAATTATGAGTTTTATTTTGCGATTGTGTGTAAAGGACAGAAGACGACGCTGCCATGCTGCAAATTCCCAAAGGATTTTGCAGAGTCCAGTTTGATGCCAGTGTCTTTCTTTNGGATAAGGTTCGTTTTAAGCCTGAGGTCTGGTTTATTTAGCCCAGTCTTTACACATGCAGCAGTAGTAGAGATACATTAGCCATGTGTGAATAGGCAAAGCTAGTGTCTA] [+] EMBL CNS08FBK [TGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCTATCATCAAAACACGACGCACCAATCGATTGAAGGATCAGCTAATCCCCAACTCGGCGTGGAAGGATTACTCCTCCAACACCATACTACGCGTTCGATAACTTTGAGCCAGAGTCGAAGCACCACAAGGGGCGCTCCTCCGACCGCGGCTACAGCAATGGCAACAGTCGGCAAACCACGCTGCAGATGTCGCACTCCCCCAACAAGTCGCAGTACTACGAGATTGATCGTACGTGATGGTGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCGCGCCACGGATACGATCGTACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCACCAGCAGCAGCAACAGCAACATCAACAGCAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAG ] [+] EMBL BX619891 [ TCCGACCTTNAC TTACGCCAACGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTG CAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTTATAGGGAAAACCTGGGGATGACAGGGGTTCAGTTTGTAACGCATAAGNCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAACCATTCCAAAACGTGCAAA ] [+] EMBL BX467736 [ ccagaaTCGGCACG AGGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTT TAGGGAAAACCTGGGGATGACA GGGTTCAGTTTGTAACGCATAAG CTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAACCATTCCAAAACGTGCAAAGGATATAAAAAAAAACAAGAAGTAAATACTCCTCAGACATGTCTCCTCAGAATGGGGAATGAGCAGCGCAATGAAACGGCGCACATTCAACCCACTGTATATAATATGTTTTTACCCATTTCTTTTTTGTTTCATTTCCATTTTTAAACCCCCTCACACTACTCCTCCAGCATTGTTTGCGTTGTTTTTAATAAAGAAAAATTATGAGTTTTATTTTGCGATTGTGTGTAAAGGACAGAAGACGACGCTGCCATGCTGCAAATTCCCAAAGGATTTTGCAGAGTCCAGTTTGATGCCAGTGTCTTTCTTTNGGATAAGGTTCGTTTTAAGCCTGAGGTCTGGTTTATTTAGCCCAGTCTTTACACATGCAGCAGTAGTAGAGATACATTAGCCATGTGTGAATAGGCAAAGCTAGTGTCTA] consensusID : consensus_8710#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1132 fasta sequence [CGGCGAAATTGGAGCTGACACTGCACAACCTGATGGTGAATAACCTTTCCTCGGGTAAGGTGGGTGCCTTCTCCGTAGATCCCACGTATCTGGAGTTTACCCAACTGGAAGGACAAGCATCGTCGCCCAAGGAAGAGTATGAGCTATTGCCAGCCGGTGTACGTCTCTATCTGATTCTGGGATGCATTGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCATCATCAAAACACGACGCACCAATCGATTGAAGGATCAGCTAATCCCCAACTCGGCGTGGAAGGATTACTCCTCCAACACCAACTACGCGTTCGATAACTTTGAGCCAGAGTCGAAGCACCACAAGGGGCGCTCCTCCGACCGCGGCTACAGCAATGGCAACAGTCAGCAAACCACGCTGCAGATGTCCCACTCCCCCAACAAGTCGCAGTACTACGAGATCGATCGTACGGATGGTGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCACGCCACGGATACGATCGTACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCACCAGCAGCAGCAGCAGCAGCAGCAGATGCAGCAGCGACATCATCAAGAGATGCAATCACGTCCCACCGGCGACTACTACACGCAGGATCGTCGTGGCAAGTCACGCAACAACGGTAGCCACTATGCTGGCAATGGTCATCAGCCGCAGCATCAGTCGTCGCAGCAGCATCATCATCAGCAGCAACAACAACATCAACAACAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCCGGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGGAAACGTTCGGATGTCTTTTCAGGCTTCCTCTGTCCTTAGTGTTTAGGGAAAATCGGGAGACGACAGGGGTTCAGTTTGTAACGCATAAGCTGAACGTGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAAACATTCCAAAACGTGGCAAGGATATAAAAAAACAACAACTAAATACTCCTCAGACAT] [+] EMBL BM642592 [CGGCGAAATTGGAGCTGACACTGCACAACCTGATGGTGAATAACCTTTCCTCGGGTAAGGTGGGTGCCTTCTCCGTAGATCCCACGTATCTGGAGTTTACCCAACTGGAAGGACAAGCATCGTCGCCCAAGGAAGAGTATGAGCTATTGCCAGCCGGTGTACGTCTCTATCTGATTCTGGGATGCATTGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCATCATCAAAACACGACGCACCAATCGATTGAAGGATCAGCTAATCCCCAACTCGGCGTGGAAGGATTACTCCTCCAACACCAACTACGCGTTCGATAACTTTGAGCCAGAGTCGAAGCACCACAAGGGGCGCTCCTCCGACCGCGGCTACAGCAATGGCAACAGTCAGCAAACCACGCTGCAGATGTCCCACTCCCCCAACAAGTCGCAGTACTACGAGATCGATCGTACGGATGGTGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCACGCCACGGATACGATCGTACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCACCAGCAGCAGCAGCAGCAGCAGCAGATGCAGCAGCGACATCATCAAGAGATGCAATCACGTCC ] [+] EMBL BM651004 [ ccgGGAAGGATTACTCCTCCAACACCAACTACGCGTTCGATAACTTTGAGCCAGAGTCGAAGCACCACAAGGGGCGCTCCTCCGACCGCGGCTACAGCAATGGCAACAGTCAGCAAACCACGCTGCAGATGTCGCACTCCCCCAACAAGTCGCAGTACTACGAGATTGATCGTACGGATGGTGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCGCGCCACGGATACGATCGTACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCAC CAGCAGCAGCAGCAGCAGCAGATGCAGCAGCGACATCATCAAGAGATGCAATCACGTCCCACCGGCGACTACTACACGCAGGATCGTCGTGGCAAGTCACGCAACAACGGTAGCCACTATGCTGGCAATGGTCATCAGCCGCAGCATCAGTCGTCGCAGCAGCATCATCATCAGCAGCAACAACAACATCAACAACAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCCGGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGGAAACGTTCGGATGTC ] [+] EMBL BM602780 [ ccGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCACGCCACGGATACGATCGTACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCACCAGCAGCAGCAGCAGCAGCAGCAGATGCAGCAGCGACATCATCAAGAGATGCAATCACGTCCCACCGGCGACTACTACACGCAGGATCGTCGTGGCAAGTCACGCAACAACGGTAGCCACTATGCTGGCAATGGTCATCAGCCGCAGCATCAGTCGTCGCAGCAGCATCATCATCAGCAGCAACAGCAACATCAACAGCAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCC GGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGG AACGTTCGGATGTCTTTTCAGGCTTCCTCTGTCCTTAGTGTTTAGGGAAAATCGGGAGACGACAGGGGTTCAGTTTGTAACGCATAAGCTGAACGTGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAAACATTCCAAAACGTGGCAAGGATATAAAAAAACAACAACTAAATACTCCTCAGACAT] consensusID : consensus_8710#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 830 fasta sequence [GAATTGCCCAGGATTATAGTTGCCAAGGGAAGAGTATGAGCTACTGCAGCGGTGTACGTCTCTATCTGATTCTGGGATGCATTGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCATCATCAAAANACGACGCACCAATCGATTGAAGTCATCAGCTTATCCNCAACTCGGCGTGGAAGGATTACTCCGTCCAAACCAAGCTACGCGTTCGAGTAACTTTGAGCCAGAGTCGATAGCACCACAAGGGGTCGCTCCTCCGACCGTGGTACAGCAATGGCAAGCAGTCAGGAAACCATCGCTGCAGATTGTCGCACTTCCCCCAAACAATGTCGCAGTACTACCGAGATTGATCTGTACGGATTGGTGGCCGGTTATTGCCGACGCATCGGAATTGGGCAGCTCGGGCTTATCCTTAACCATCGCGGAACAAAACCGGTCGCNCTACAGTGATTACAGATCCGTACGCAGGGAGACCGTTCTTCCGTTACCTGCCTGGAGCCTGCGCTATTACATTCAGCTTAAACCGCCCGTCACCAATGGCANCCAAGCCATGCAGGCCTAGGCCAAGNCTAGGCTAGAATTGTCGACGCAAGCCTGGACCATTCCATTCCAAACGCACGAATTGCAAATTCACGTTCCACTCCAAGCACCCGGGGCGTCAATCTTATACCTTAAACAAACTGACCAATGACGGAAAGTTCCAGGTATCCGCTTGCGGCCGAAAAGGGTTCCAACTGGGCACAAAGCCAAAGATCCGCAGGCTTAAAGNACACCAAACCGATAATTTGGCNCTTGGGTGCCCACAAATNGGGGGGTTCCA] [+] EMBL AL697302 [GAATTGCCCAGGATTATAGTTGCCAAGGGAAGAGTATGAGCTACTGCAGCGGTGTACGTCTCTATCTGATTCTGGGATGCATTGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCATCATCAAAANACGACGCACCAATCGATTGAAGTCATCAGCTTATCCNCAACTCGGCGTGGAAGGATTACTCCGTCCAAACCAAGCTACGCGTTCGAGTAACTTTGAGCCAGAGTCGATAGCACCACAAGGGGTCGCTCCTCCGACCGTGGTACAGCAATGGCAAGCAGTCAGGAAACCATCGCTGCAGATTGTCGCACTTCCCCCAAACAATGTCGCAGTACTACCGAGATTGATCTGTACGGATTGGTGGCCGGTTATTGCCGACGCATCGGAATTGGGCAGCTCGGGCTTATCCTTAACCATCGCGGAACAAAACCGGTCGCNCTACAGTGATTACAGATCCGTACGCAGGGAGACCGTTCTTCCGTTACCTGCCTGGAGCCTGCGCTATTACATTCAGCTTAAACCGCCCGTCACCAATGGCANCCAAGCCATGCAGGCCTAGGCCAAGNCTAGGCTAGAATTGTCGACGCAAGCCTGGACCATTCCATTCCAAACGCACGAATTGCAAATTCACGTTCCACTCCAAGCACCCGGGGCGTCAATCTTATACCTTAAACAAACTGACCAATGACGGAAAGTTCCAGGTATCCGCTTGCGGCCGAAAAGGGTTCCAACTGGGCACAAAGCCAAAGATCCGCAGGCTTAAAGNACACCAAACCGATAATTTGGCNCTTGGGTGCCCACAAATNGGGGGGTTCCA] consensusID : consensus_8710#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 748 fasta sequence [CGCCCGAGGTTAACGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTACAGACTTCCTACTGTCCTTAGTGTTTAGTGGAAAACCTGGCGGATGACAGGCGTTCAGTTTGTAACGCATAAGCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTNAACCACTCAACCATTCCAAAACGTGCAAAGGATATANAACAAAAACAAGAAGTAAATACGTCCTCAGACATGTCTCCTCAGAATGGGNGAATGCAGCAGCGCAATGCAAACGGCGCACATTCAACGCCACTGTACTATANTATGTTCTTTACCCCCACTATATCTATATAANCNTAGTAAATCAGTTGTCCCAATTATTCGTAAANCACCACCATCGACACGTTACGTACACGTCCAAGGCACTTTGGTGTNTGCCGGTATGGTGCTAGNNAATTAAACAGAANAAGATTCAATGAANGNGTTATATAATAGAAANAGANCNGCATACTNGGTATGGTTAGTAAANATGTGGACTAACGNAAAAGGAAAACAGGAAGCACGGCTTGGCGCCAACTTGCNATTGNCCACAAAGACTATCCCCCCCCAGCAAAATGGNGGAATTTCGTTNCTGGCCACGAGCAAGGATTCCCAAGGTGCNCTCNTGCAAGTTGGCCACCAAGGAGTGTATTACATTTACTCCGTACTACGTATGCTCGNGCTCCTAGGGGTATACCNGCAGNGTGTANATAAAGGANCCACTTGGCAAGA] [+] EMBL AL933133 [CGCCCGAGGTTAACGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTACAGACTTCCTACTGTCCTTAGTGTTTAGTGGAAAACCTGGCGGATGACAGGCGTTCAGTTTGTAACGCATAAGCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTNAACCACTCAACCATTCCAAAACGTGCAAAGGATATANAACAAAAACAAGAAGTAAATACGTCCTCAGACATGTCTCCTCAGAATGGGNGAATGCAGCAGCGCAATGCAAACGGCGCACATTCAACGCCACTGTACTATANTATGTTCTTTACCCCCACTATATCTATATAANCNTAGTAAATCAGTTGTCCCAATTATTCGTAAANCACCACCATCGACACGTTACGTACACGTCCAAGGCACTTTGGTGTNTGCCGGTATGGTGCTAGNNAATTAAACAGAANAAGATTCAATGAANGNGTTATATAATAGAAANAGANCNGCATACTNGGTATGGTTAGTAAANATGTGGACTAACGNAAAAGGAAAACAGGAAGCACGGCTTGGCGCCAACTTGCNATTGNCCACAAAGACTATCCCCCCCCAGCAAAATGGNGGAATTTCGTTNCTGGCCACGAGCAAGGATTCCCAAGGTGCNCTCNTGCAAGTTGGCCACCAAGGAGTGTATTACATTTACTCCGTACTACGTATGCTCGNGCTCCTAGGGGTATACCNGCAGNGTGTANATAAAGGANCCACTTGGCAAGA] consensusID : consensus_8710#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 672 fasta sequence [GCAGAATTCGGCACGAGGTCGGAGTATTCGTCGACTACAACAAGGCACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTTTAGGGAAAAACCTGGGGATGACCAAGGGGGGTATCAAGGTTTGTAACGGCAATAAAGGCTTGAAACGCGGGGCACGGTTGACTTGGTTGGTTCAACCAAATTGCCGGTTACCAGCTTCAAGCCATTTCCAAAAACCGGTTGGCAAAAGGGATTATTAACAACCAGAGAAANCACAGAAGGTTAGANTTAGCTTCCTTACAAGGAAACCAATTAGTTCTTCCCTTTCAGANAATTNGGGGGGAAATTGNAGCCCAAGGTCGGCCAAAAATGCAAAAACCGGGNGCTCGGCCAANCAATTTTCAAAGCACCCANACATTGTTAATTAATTCAAGTAACTGGGTTATATATNAAACCCACNAATTTAGTAGCCATTNTAGATTATACACAGGGGGTATATCCAACNTTATTATCCCCAAATTTTGTTTAAAAATATCCACCACCNCCATTTTCATAANCAAAGAGATTACGATTCCGCATTTATCCCAAAAGAGTCCAAAGTTTATGGANATATATNATAGACACAGTTATTACAGTATATCAGATTAA] [+] EMBL BX468740 [GCAGAATTCGGCACGAGGTCGGAGTATTCGTCGACTACAACAAGGCACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTTTAGGGAAAAACCTGGGGATGACCAAGGGGGGTATCAAGGTTTGTAACGGCAATAAAGGCTTGAAACGCGGGGCACGGTTGACTTGGTTGGTTCAACCAAATTGCCGGTTACCAGCTTCAAGCCATTTCCAAAAACCGGTTGGCAAAAGGGATTATTAACAACCAGAGAAANCACAGAAGGTTAGANTTAGCTTCCTTACAAGGAAACCAATTAGTTCTTCCCTTTCAGANAATTNGGGGGGAAATTGNAGCCCAAGGTCGGCCAAAAATGCAAAAACCGGGNGCTCGGCCAANCAATTTTCAAAGCACCCANACATTGTTAATTAATTCAAGTAACTGGGTTATATATNAAACCCACNAATTTAGTAGCCATTNTAGATTATACACAGGGGGTATATCCAACNTTATTATCCCCAAATTTTGTTTAAAAATATCCACCACCNCCATTTTCATAANCAAAGAGATTACGATTCCGCATTTATCCCAAAAGAGTCCAAAGTTTATGGANATATATNATAGACACAGTTATTACAGTATATCAGATTAA] consensusID : consensus_8710#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 585 fasta sequence [GCTCGAGCAGATCGGCCGAGGAGTTNACCATGCCCGATTCTCCGACCTTTACTTTACGCCAANGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTTTAGGGAAAACCTGGGGATGACAGGGGTTCAGTTTGTAACGCATAAGCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAACATTCCAAAACGTGCAANAGGATATAAAAAAAAACAAGAAGTAANATACTCCTCAGACATGTCTCCTCAGAATGGGGACTGAGCATGCGCAATGAAACGGCGCACATTCAAACCACTGTATATAATATGTATTCTTACCCATTTCTTGTTANGTTTCATNTTCCATTTTTTAAACCCCCTCACACTAATCCTCCAGCATTGTATGCGTAGTATCNTTCAACTAACACGGAACAANACTTATGAGTTNTATTCTCTGCGAACTGTGTGTAAAGGACAGAAGGACGACGCTGCATGCT] [+] EMBL AL696713 [GCTCGAGCAGATCGGCCGAGGAGTTNACCATGCCCGATTCTCCGACCTTTACTTTACGCCAANGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTTTAGGGAAAACCTGGGGATGACAGGGGTTCAGTTTGTAACGCATAAGCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAACATTCCAAAACGTGCAANAGGATATAAAAAAAAACAAGAAGTAANATACTCCTCAGACATGTCTCCTCAGAATGGGGACTGAGCATGCGCAATGAAACGGCGCACATTCAAACCACTGTATATAATATGTATTCTTACCCATTTCTTGTTANGTTTCATNTTCCATTTTTTAAACCCCCTCACACTAATCCTCCAGCATTGTATGCGTAGTATCNTTCAACTAACACGGAACAANACTTATGAGTTNTATTCTCTGCGAACTGTGTGTAAAGGACAGAAGGACGACGCTGCATGCT] consensusID : consensus_8710#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 494 fasta sequence [GAGGCAGAATTCGGCACGATGGACACATCAACAACAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGGACAAGAAGTAAACCTGTGCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTTCTTCTGGTCCTTAGGTGTTTAGGGAAAACCTGGGGGGATGACAGGGGTTCAGGTTTTGTAACCGCCATAAGCTTGAACGCGGGCCACCGTGACCTTGGTGGTCACCACAATGCCGTTTACCAACGTCAAAGCCATTTCCCAAAAACGTTGCCACAGGATATTCACAACAAACACCAACGCACAGTTCAAAATTACTTCCCTTCAGACCATTGTTCTCCCTCAGAAAATGGGGAAATTANCCACAGCGNCAAATTGNGAAAACCGGGGCGNCCACACATTTCNAAGACCCAACTT] [+] EMBL BX468162 [GAGGCAGAATTCGGCACGATGGACACATCAACAACAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGGACAAGAAGTAAACCTGTGCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTTCTTCTGGTCCTTAGGTGTTTAGGGAAAACCTGGGGGGATGACAGGGGTTCAGGTTTTGTAACCGCCATAAGCTTGAACGCGGGCCACCGTGACCTTGGTGGTCACCACAATGCCGTTTACCAACGTCAAAGCCATTTCCCAAAAACGTTGCCACAGGATATTCACAACAAACACCAACGCACAGTTCAAAATTACTTCCCTTCAGACCATTGTTCTCCCTCAGAAAATGGGGAAATTANCCACAGCGNCAAATTGNGAAAACCGGGGCGNCCACACATTTCNAAGACCCAACTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8710#0 TGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCTATCATCAAAACACGAC 60 consensus_8710#5 ------------------------------------------------------------ consensus_8710#4 ------------------------------------------------------------ consensus_8710#6 ------------------------------------------------------------ consensus_8710#3 ------------------------------------------------------------ consensus_8710#1 ------------------------------------------------------------ consensus_8710#2 ------------------------------------------------------------ consensus_8710#0 GCACCAATCGATTGAAGGATCAGCTAATCCCCAACTCGGCGTGGAAGGATTACTCCTCCA 120 consensus_8710#5 ------------------------------------------------------------ consensus_8710#4 ------------------------------------------------------------ consensus_8710#6 ------------------------------------------------------------ consensus_8710#3 ------------------------------------------------------------ consensus_8710#1 ------------------------------------------------------------ consensus_8710#2 ------------------------------------------------------------ consensus_8710#0 ACACCATACTACGCGTTCGATAACTTTGAGCCAGAGTCGAAGCACCACAAGGGGCGCTCC 180 consensus_8710#5 ------------------------------------------------------------ consensus_8710#4 ------------------------------------------------------------ consensus_8710#6 ------------------------------------------------------------ consensus_8710#3 ------------------------------------------------------------ consensus_8710#1 ---------------------------CGGCGAAATTGGAGCTGACACTGCACAACCTGA 33 consensus_8710#2 ------------------------------------------------------------ consensus_8710#0 TCCGACCGCGGCTACAGCAATGGCAACAGTCGGCAAACCACGCTGCAGATGTCGCACTCC 240 consensus_8710#5 ------------------------------------------------------------ consensus_8710#4 ------------------------------------------------------------ consensus_8710#6 ------------------------------------------------------------ consensus_8710#3 ------------------------------------------------------------ consensus_8710#1 TGGTGAATAACCTTTCCTCGGGTAAGGTGGGTGCCTTCTCCGTAGATCCCACGTATCTGG 93 consensus_8710#2 ------------------------------------------------------------ consensus_8710#0 CCCAACAAGTCGCAGTACTACGAGATTGATCGTACGTGATGGTGGCGGTATGCCGACGCA 300 consensus_8710#5 ------------------------------------------------------------ consensus_8710#4 ------------------------------------------------------------ consensus_8710#6 ------------------------------------------------------------ consensus_8710#3 ------------------------------------------------------------ consensus_8710#1 AGTTTACCCAACTGGAAGGACAAGCATCGTCGCCCAAGGAAGAGTATGAGCTATTGCCAG 153 consensus_8710#2 ------------------------------------------------------------ consensus_8710#0 TCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCGCGCCACGGATACGATCG 360 consensus_8710#5 ------------------------------------------------------------ consensus_8710#4 ------------------------------------------------------------ consensus_8710#6 ------------------------------------------------------------ consensus_8710#3 ------------------------------------------------------------ consensus_8710#1 CCGGTGTACGTCTCTATCTGATTCTGGGATGCATTGCCGGTTTGGTGTTCATTGCCATCG 213 consensus_8710#2 ------------------------------------------------------------ consensus_8710#0 TACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCACCA 420 consensus_8710#5 ------------------------------------------------------------ consensus_8710#4 ------------------------------------------------------------ consensus_8710#6 ---------------------------------------------------GAGGCAGAA 9 consensus_8710#3 ------------------------------------------------------------ consensus_8710#1 TTCAGGCTACTTGCACCATCATCAAAACACGACGCACCAATCGATTGAAGGATCAGCTAA 273 consensus_8710#2 ------------------------------------------------------GAATTG 6 consensus_8710#0 GCAGCAGCAACAGCAACATCAACAGCAACAGCGAC-CCATGCCCGATTCCTCCGACCTTT 479 consensus_8710#5 ------GCTCGAGCAG-ATCGGCCG-AGGAGTTNA-CCATGCCCGATTC-TCCGACCTTT 50 consensus_8710#4 ------------------------------------------------------------ consensus_8710#6 TTCGGCACGATGGACACATCAACAACAACAGCGAC-CCATGCCCGATTCCTCCGACCTTT 68 consensus_8710#3 ------------CGCCCGAGGTTAACGTTGCTAGT-CCTTCGGAACGTTCGGATGTCTTT 47 consensus_8710#1 TCCCCAACTCGGCGTGGAAGGATTACTCCTCCAACACCAACTACGCGTTCGATAACTTTG 333 consensus_8710#2 CCCAGGATTATAGTTGCCAAGGGAAGAGTATGAGC-TACTGCAGCGGTGTACGTCTCTAT 65 consensus_8710#0 ACTTTACGCCAACGCAGCGAAAGTA------CTCCG-GTGAGGTCGTGCGGGTATTCGTC 532 consensus_8710#5 ACTTTACGCCAANGCAGCGAAAGTA------CTCCG-GTGAGGTCGTGCGGGTATTCGTC 103 consensus_8710#4 -------------------GCAGAA------TTCGGCACGAGGTCG---GAGTATTCGTC 32 consensus_8710#6 ACTTTACGCCAACGCAGCGAAAGTA------CTCCG-GTGAGGTCGTGCGGGTATTCGTC 121 consensus_8710#3 TACAGACTTCCTACTGTCCTTAGTG------TTTAGTGGAAAACCTGGCGGATGACAGGC 101 consensus_8710#1 AGCCAGAGTCGAAGCACCACAAGGGGCGCTCCTCCGACCGCGGCTACAGCAATGGCAACA 393 consensus_8710#2 CTGATTCTGGGATGCATTGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACC 125 * consensus_8710#0 GAC--TACAACAAGG-ACAAGAAGTAAACCGTGCCAACCG-TTGCTAGTCCTTCGGAA-C 587 consensus_8710#5 GAC--TACAACAAGG-ACAAGAAGTAAACCGTGC-AACCG-TTGCTAGTCCTTCGGAA-C 157 consensus_8710#4 GAC--TACAACAAGGCACAAGAAGTAAACC-GTGCAACCG-TTGCTAGTCCTTCGGAA-C 87 consensus_8710#6 GAC--TACAACAAGGGACAAGAAGTAAACCTGTGCAACCG-TTGCTAGTCCTTCGGAA-C 177 consensus_8710#3 GTT--CAGTTTGTAACGCATAAGCTGAACGCGGGCA--CG-TGACTGGTGGT-CACAA-T 154 consensus_8710#1 GTCAGCAAACCACGCTGCAGATGTCCCACTCCCCCAACAA-GTCGCAGTACTACGAGATC 452 consensus_8710#2 ATCATCAAAANACGACGCACCAATCGATTGAAGTCATCAGCTTATCCNCAACTCGGCGTG 185 * ** * * consensus_8710#0 GTTCGGATG--TCTTTTCAGACTTCCTCT--GTCCTTA-GTGTTATAGGGAAAA-CC-TG 640 consensus_8710#5 GTTCGGATG--TCTTTTCAGACTTCCTCT--GTCCTTA-GTGTT-TAGGGAAAA-CC-TG 209 consensus_8710#4 GTTCGGATG--TCTTTTCAGACTTCCTCT--GTCCTTA-G-TGTTTAGGGAAAAACC-TG 140 consensus_8710#6 GTTCGGATG--TCTTTTCAGACTTTCTTCTGGTCCTTA-GGTGTTTAGGGAAAA-CC-TG 232 consensus_8710#3 GC-CGTNAA--CCACTCAACCATTCCAAAACGTGCAAA-G-GATATANAACAAAAAC-AA 208 consensus_8710#1 GATCGTACGGATGGTGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCT-TA 511 consensus_8710#2 GAAGGATTACTCCGTCCAAACCAAGCTACGCGTTCGAGTAACTTTGAGCCAGAGTCGATA 245 * * * * * consensus_8710#0 G------GGATGACAG-----------GGGTTCAGTTTGTAACGCATAAGNCTGAACGCG 683 consensus_8710#5 G------GGATGACAG-----------GGGTTCAGTTTGTAACGCATAAGC-TGAACGCG 251 consensus_8710#4 G------GGATGACCA--------AGGGGGGTA---TCAAGGTTTGTAACG---GCAATA 180 consensus_8710#6 G------GG--GGATG--------ACAGGGGT----TCAGGTTTTGTAACC---GCCATA 269 consensus_8710#3 G------AAGTAAATACGTCCTC-AGACATGTCTCCTCAGAATGGGNGAAT---GCAGCA 258 consensus_8710#1 CCCACCCGGACAACCACGCCACG-GATACGATCGTACCGGAGACCGTTCTTCGTACGCTG 570 consensus_8710#2 GCACCACAAGGGGTCGCTCCTCCGACCGTGGTACAGCAATGGCAAGCAGTCAGGAAACCA 305 * consensus_8710#0 GGCACGTGACT-GGTGGTCACAATGCCGTTACCACTCAACCATTCCAAAACGTGCAAA-G 741 consensus_8710#5 GGCACGTGACT-GGTGGTCACAATGCCGTTACCACTCAAC-ATTCCAAAACGTGCAANAG 309 consensus_8710#4 AAGGCTTGAAA-CGCGG-GGCACGGTTGACTTGGTTG-GTTCAACCAAATTGCCGGTTAC 237 consensus_8710#6 A--GCTTGAA--CGCGG-GCCACCGT-GACCTTGGTG-GTC--ACCACAATGCCGTTTAC 320 consensus_8710#3 GCGCAATGCA--AACGG-CGCACATTCAACGCCACTGTACTATANTATGTTCTTTACCCC 315 consensus_8710#1 ACCGCGCATACTCACTACCCCGTCCAATGCACCAGCAGCAGCAGCAGCAGCAGCAGATGC 630 consensus_8710#2 TCGCTGCAGATTGTCGCACTTCCCCCAAACAATGTCGCAGTACTACCGAGATTGATCTGT 365 consensus_8710#0 GA-TATAAAAAAAAACAAGAAGTAAA-TACTCCTCA--GACATGTCTCCTCAGAATGGGG 797 consensus_8710#5 GA-TATAAAAAAAAACAAGAAGTAANATACTCCTCA--GACATGTCTCCTCAGAATGGGG 366 consensus_8710#4 CA--GCTTCAA-GCCATTTCCAAAAACCGGTTGGCA--AAAGGGATTATTAACAACCAGA 292 consensus_8710#6 CA--ACGTCAAAGCCATTTCCCAAAAACG-TTGCCA--CAGGA---TATTCACAACAAAC 372 consensus_8710#3 CACTATATCTATATAANCNTAGTAAATCAGTTGTCC--CAATTATTCGTAAANCACCACC 373 consensus_8710#1 AGCAGCGACATCATCAAGAGATGCAATCACGTCCCA--CCGGCGACTACT-ACACGCAGG 687 consensus_8710#2 ACGGATTGGTGGCCGGTTATTGCCGACGCATCGGAATTGGGCAGCTCGGGCTTATCCTTA 425 consensus_8710#0 AATGA-GCA--GCGCAATGAAACGGCG-----CACATTCAACCCACTGTATATAATATGT 849 consensus_8710#5 ACTGA-GCAT-GCGCAATGAAACGGCG-----CACATTCAAACCACTGTATATAATATGT 419 consensus_8710#4 GAAANCACAG-AAGGTTAGANTTAGCT-----TCCTTACAAGGAAACCAATTAGTTCTTC 346 consensus_8710#6 ACCAACGCAC-A-GTTCAAAATTACTT-----CCCTTC-----AGACCA-----TTGTTC 415 consensus_8710#3 ATCGACACGTTACGTACACGTCCAAGG-----CACTTTGGTGTNTGCCGGT--ATGGTGC 426 consensus_8710#1 ATCGTCGTGGCAAGTCACGCAACAACGGTAGCCACTATGCTGGCAATGGTCATCAGCCGC 747 consensus_8710#2 ACCATCGCGGAACAAAACCGGTCGCNCTACAGTGATTACAGATCCGTACGCAGGGAGACC 485 consensus_8710#0 --TTTTACCCATTTCTTTTT-TGTTTCATTTCCA--TTT----TTAAACCCCCTCACACT 900 consensus_8710#5 ATTCTTACCCATTTCTTGTTANGTTTCATNTTCCATTTT----TTAAACCCCCTCACACT 475 consensus_8710#4 CCTTTCAGANAATTNGGGGGGAAATTGNAGCCCAAGGTCGG--CCAAAAATGCAAAAACC 404 consensus_8710#6 TCCCTCAGAAAAT----GGGGAAATT-ANCCACAGCGNC-------AAATTGNGAAAACC 463 consensus_8710#3 TAGNNAATTAAAC--AGAANAAGATTCAATGAANGNGTTAT--ATAATAGAAANAGANCN 482 consensus_8710#1 AGCATCAGTCGTCGCAGCAGCATCATCATCAGCAGCAACAA--CAACATCAACAACAACA 805 consensus_8710#2 GTTCTTCCGTTACCTGCCTGGAGCCTGCGCTATTACATTCAGCTTAAACCGCCCGTCACC 545 * * consensus_8710#0 ---ACTCCTCCAGCATTGTTTGCGTTGT------TTTTAAT-------AAAGAAAAATTA 944 consensus_8710#5 ---AATCCTCCAGCATTGTATGCGTAGTA---TCNTTCAACTAACACGGAACAANACTTA 529 consensus_8710#4 ---GGGNGCTCGGCCAANCAATTTTCAAA---GCACCCANA-CATTGTTAATTAATTCAA 457 consensus_8710#6 ---GGGG---CGNCCACACA--TTTCNAA---G-ACCCAAC-TT---------------- 494 consensus_8710#3 ---GCATACTNGGTATGGTTA--GTAAAN---ATGTGGACT-AACGNAAAAGGAAAACAG 533 consensus_8710#1 ---GCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTC 862 consensus_8710#2 AATGGCANCCAAGCCATGCAGGCCTAGGCC--AAGNCTAGGCTAGAATTGTCGACGCAAG 603 consensus_8710#0 TGAGTTTTATTTTGCG---ATTGTGTGTAAAGGACAGAAG-ACGACGCTGCCATGCTGCA 1000 consensus_8710#5 TGAGTTNTATTCTCTGCGAACTGTGTGTAAAGGACAGAAGGACGACGCTGC-ATGCT--- 585 consensus_8710#4 GTAACTGGGTTATATATNAAACCCACNAATTTAGTAGCCATTNTAGATTAT---ACACAG 514 consensus_8710#6 ------------------------------------------------------------ consensus_8710#3 GAAGCACGGCTTGGCGCCAACTTGCNATTGNCCACAAAGACTATCCCCCCC---CAGCAA 590 consensus_8710#1 CGGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAA-CCGTGCAA 921 consensus_8710#2 CCTGGACCATTCCATTCCAAACGCACGAATTGCAAATTCACGTTCCACTCC-AAGCACCC 662 consensus_8710#0 AATTCCCAAAGGATTTTGCAGAGTCCAGTTTGATGCCAGTGTCTTTCTTTNGGATAAGGT 1060 consensus_8710#5 ------------------------------------------------------------ consensus_8710#4 GGGGTATATCCAACNTTATTATCCCCAAATTTTGTTTAAAAATATCCACCACCNCCATTT 574 consensus_8710#6 ------------------------------------------------------------ consensus_8710#3 AATGGNGGAATTTCGTTNCTGGCCACGAGCAAGGATTCCCAAGGTGCNCT-CNTGCAAGT 649 consensus_8710#1 CCGTTGCTAGTCCTTCGGAAACGTTCGGATGTCTTTTCAGGCTTCCTCTGTCCTTAGTGT 981 consensus_8710#2 GGGGCGTCAATCTTATACCTTAAACAAACTGACCAATGACGGAAAGTTCCAGGTATCCGC 722 consensus_8710#0 TCGTTTTAAGCCTGAGGTCTGG-TTTATTTAGCCCAGTCTTTACACATGCAGCAGTAGTA 1119 consensus_8710#5 ------------------------------------------------------------ consensus_8710#4 TCAT---AANCAAAGAGATTAC-GATTCCGCATTTATCCCAAAAGAGTCCAAAGTTTATG 630 consensus_8710#6 ------------------------------------------------------------ consensus_8710#3 TGGC---CACCAAGGAGTGTAT-TACATTTACTCCGTACTACGTATGCTCGN-GCTCCTA 704 consensus_8710#1 TTAGGGAAAATCGGGAGACGACAGGGGTTCAGTTTGTAACGCATAAGCTGAACGTGGGCA 1041 consensus_8710#2 TTGC---GGCCGAAAAGGGTTC-CAACTGGGCACAAAGCCAAAGATCCGCAGGCTTAAAG 778 consensus_8710#0 GAGAT-ACATTAGCCATGTGTGAATAGGCAAAGCTAGTGTCTA----------------- 1161 consensus_8710#5 ------------------------------------------------------------ consensus_8710#4 GANAT-ATATNATAGACACAGTTATTACAGTATATCAGATTAA----------------- 672 consensus_8710#6 ------------------------------------------------------------ consensus_8710#3 GGGGT-ATACCNGCAGNGTGTANATAAAGGANCCACTTGGCAAGA--------------- 748 consensus_8710#1 CGTGA-CTGGTGGTCACAATGCCGTTACCACTCAAACATTCCAAAACGTGGCAAGGATAT 1100 consensus_8710#2 NACACCAAACCGATAATTTGGCNCTTGGGTGCCCACAAATNGGGGGGTTCCA-------- 830 consensus_8710#0 -------------------------------- consensus_8710#5 -------------------------------- consensus_8710#4 -------------------------------- consensus_8710#6 -------------------------------- consensus_8710#3 -------------------------------- consensus_8710#1 AAAAAAACAACAACTAAATACTCCTCAGACAT 1132 consensus_8710#2 -------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||