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Anopheles gambiae
cluster # 8710 cluster # 8710       Sequences # 11       consensus # 7


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8710#0 length = 1161 sequences # 3  
consensus_8710#1 length = 1132 sequences # 3  
consensus_8710#2 length = 830 sequences # 1  
consensus_8710#3 length = 748 sequences # 1  
consensus_8710#4 length = 672 sequences # 1  
consensus_8710#5 length = 585 sequences # 1  
consensus_8710#6 length = 494 sequences # 1  

consensusID : consensus_8710#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1161
fasta sequence
                              [TGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCTATCATCAAAACACGACGCACCAATCGATTGAAGGATCAGCTAATCCCCAACTCGGCGTGGAAGGATTACTCCTCCAACACCATACTACGCGTTCGATAACTTTGAGCCAGAGTCGAAGCACCACAAGGGGCGCTCCTCCGACCGCGGCTACAGCAATGGCAACAGTCGGCAAACCACGCTGCAGATGTCGCACTCCCCCAACAAGTCGCAGTACTACGAGATTGATCGTACGTGATGGTGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCGCGCCACGGATACGATCGTACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCACCAGCAGCAGCAACAGCAACATCAACAGCAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTTATAGGGAAAACCTGGGGATGACAGGGGTTCAGTTTGTAACGCATAAGNCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAACCATTCCAAAACGTGCAAAGGATATAAAAAAAAACAAGAAGTAAATACTCCTCAGACATGTCTCCTCAGAATGGGGAATGAGCAGCGCAATGAAACGGCGCACATTCAACCCACTGTATATAATATGTTTTTACCCATTTCTTTTTTGTTTCATTTCCATTTTTAAACCCCCTCACACTACTCCTCCAGCATTGTTTGCGTTGTTTTTAATAAAGAAAAATTATGAGTTTTATTTTGCGATTGTGTGTAAAGGACAGAAGACGACGCTGCCATGCTGCAAATTCCCAAAGGATTTTGCAGAGTCCAGTTTGATGCCAGTGTCTTTCTTTNGGATAAGGTTCGTTTTAAGCCTGAGGTCTGGTTTATTTAGCCCAGTCTTTACACATGCAGCAGTAGTAGAGATACATTAGCCATGTGTGAATAGGCAAAGCTAGTGTCTA]

[+] EMBL CNS08FBK             [TGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCTATCATCAAAACACGACGCACCAATCGATTGAAGGATCAGCTAATCCCCAACTCGGCGTGGAAGGATTACTCCTCCAACACCATACTACGCGTTCGATAACTTTGAGCCAGAGTCGAAGCACCACAAGGGGCGCTCCTCCGACCGCGGCTACAGCAATGGCAACAGTCGGCAAACCACGCTGCAGATGTCGCACTCCCCCAACAAGTCGCAGTACTACGAGATTGATCGTACGTGATGGTGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCGCGCCACGGATACGATCGTACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCACCAGCAGCAGCAACAGCAACATCAACAGCAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX619891             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCCGACCTTNAC TTACGCCAACGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTG CAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTTATAGGGAAAACCTGGGGATGACAGGGGTTCAGTTTGTAACGCATAAGNCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAACCATTCCAAAACGTGCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX467736             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccagaaTCGGCACG AGGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTT TAGGGAAAACCTGGGGATGACA GGGTTCAGTTTGTAACGCATAAG CTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAACCATTCCAAAACGTGCAAAGGATATAAAAAAAAACAAGAAGTAAATACTCCTCAGACATGTCTCCTCAGAATGGGGAATGAGCAGCGCAATGAAACGGCGCACATTCAACCCACTGTATATAATATGTTTTTACCCATTTCTTTTTTGTTTCATTTCCATTTTTAAACCCCCTCACACTACTCCTCCAGCATTGTTTGCGTTGTTTTTAATAAAGAAAAATTATGAGTTTTATTTTGCGATTGTGTGTAAAGGACAGAAGACGACGCTGCCATGCTGCAAATTCCCAAAGGATTTTGCAGAGTCCAGTTTGATGCCAGTGTCTTTCTTTNGGATAAGGTTCGTTTTAAGCCTGAGGTCTGGTTTATTTAGCCCAGTCTTTACACATGCAGCAGTAGTAGAGATACATTAGCCATGTGTGAATAGGCAAAGCTAGTGTCTA]


>consensus_8710#0 TGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCTATCATCAAAACACGAC GCACCAATCGATTGAAGGATCAGCTAATCCCCAACTCGGCGTGGAAGGATTACTCCTCCA ACACCATACTACGCGTTCGATAACTTTGAGCCAGAGTCGAAGCACCACAAGGGGCGCTCC TCCGACCGCGGCTACAGCAATGGCAACAGTCGGCAAACCACGCTGCAGATGTCGCACTCC CCCAACAAGTCGCAGTACTACGAGATTGATCGTACGTGATGGTGGCGGTATGCCGACGCA TCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCGCGCCACGGATACGATCG TACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCACCA GCAGCAGCAACAGCAACATCAACAGCAACAGCGACCCATGCCCGATTCCTCCGACCTTTA CTTTACGCCAACGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAA CAAGGACAAGAAGTAAACCGTGCCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTT TTCAGACTTCCTCTGTCCTTAGTGTTATAGGGAAAACCTGGGGATGACAGGGGTTCAGTT TGTAACGCATAAGNCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCA ACCATTCCAAAACGTGCAAAGGATATAAAAAAAAACAAGAAGTAAATACTCCTCAGACAT GTCTCCTCAGAATGGGGAATGAGCAGCGCAATGAAACGGCGCACATTCAACCCACTGTAT ATAATATGTTTTTACCCATTTCTTTTTTGTTTCATTTCCATTTTTAAACCCCCTCACACT ACTCCTCCAGCATTGTTTGCGTTGTTTTTAATAAAGAAAAATTATGAGTTTTATTTTGCG ATTGTGTGTAAAGGACAGAAGACGACGCTGCCATGCTGCAAATTCCCAAAGGATTTTGCA GAGTCCAGTTTGATGCCAGTGTCTTTCTTTNGGATAAGGTTCGTTTTAAGCCTGAGGTCT GGTTTATTTAGCCCAGTCTTTACACATGCAGCAGTAGTAGAGATACATTAGCCATGTGTG AATAGGCAAAGCTAGTGTCTA



consensusID : consensus_8710#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1132
fasta sequence
                              [CGGCGAAATTGGAGCTGACACTGCACAACCTGATGGTGAATAACCTTTCCTCGGGTAAGGTGGGTGCCTTCTCCGTAGATCCCACGTATCTGGAGTTTACCCAACTGGAAGGACAAGCATCGTCGCCCAAGGAAGAGTATGAGCTATTGCCAGCCGGTGTACGTCTCTATCTGATTCTGGGATGCATTGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCATCATCAAAACACGACGCACCAATCGATTGAAGGATCAGCTAATCCCCAACTCGGCGTGGAAGGATTACTCCTCCAACACCAACTACGCGTTCGATAACTTTGAGCCAGAGTCGAAGCACCACAAGGGGCGCTCCTCCGACCGCGGCTACAGCAATGGCAACAGTCAGCAAACCACGCTGCAGATGTCCCACTCCCCCAACAAGTCGCAGTACTACGAGATCGATCGTACGGATGGTGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCACGCCACGGATACGATCGTACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCACCAGCAGCAGCAGCAGCAGCAGCAGATGCAGCAGCGACATCATCAAGAGATGCAATCACGTCCCACCGGCGACTACTACACGCAGGATCGTCGTGGCAAGTCACGCAACAACGGTAGCCACTATGCTGGCAATGGTCATCAGCCGCAGCATCAGTCGTCGCAGCAGCATCATCATCAGCAGCAACAACAACATCAACAACAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCCGGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGGAAACGTTCGGATGTCTTTTCAGGCTTCCTCTGTCCTTAGTGTTTAGGGAAAATCGGGAGACGACAGGGGTTCAGTTTGTAACGCATAAGCTGAACGTGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAAACATTCCAAAACGTGGCAAGGATATAAAAAAACAACAACTAAATACTCCTCAGACAT]

[+] EMBL BM642592             [CGGCGAAATTGGAGCTGACACTGCACAACCTGATGGTGAATAACCTTTCCTCGGGTAAGGTGGGTGCCTTCTCCGTAGATCCCACGTATCTGGAGTTTACCCAACTGGAAGGACAAGCATCGTCGCCCAAGGAAGAGTATGAGCTATTGCCAGCCGGTGTACGTCTCTATCTGATTCTGGGATGCATTGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCATCATCAAAACACGACGCACCAATCGATTGAAGGATCAGCTAATCCCCAACTCGGCGTGGAAGGATTACTCCTCCAACACCAACTACGCGTTCGATAACTTTGAGCCAGAGTCGAAGCACCACAAGGGGCGCTCCTCCGACCGCGGCTACAGCAATGGCAACAGTCAGCAAACCACGCTGCAGATGTCCCACTCCCCCAACAAGTCGCAGTACTACGAGATCGATCGTACGGATGGTGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCACGCCACGGATACGATCGTACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCACCAGCAGCAGCAGCAGCAGCAGCAGATGCAGCAGCGACATCATCAAGAGATGCAATCACGTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM651004             [                                                                                                                                                                                                                                                                                             ccgGGAAGGATTACTCCTCCAACACCAACTACGCGTTCGATAACTTTGAGCCAGAGTCGAAGCACCACAAGGGGCGCTCCTCCGACCGCGGCTACAGCAATGGCAACAGTCAGCAAACCACGCTGCAGATGTCGCACTCCCCCAACAAGTCGCAGTACTACGAGATTGATCGTACGGATGGTGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCGCGCCACGGATACGATCGTACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCAC   CAGCAGCAGCAGCAGCAGCAGATGCAGCAGCGACATCATCAAGAGATGCAATCACGTCCCACCGGCGACTACTACACGCAGGATCGTCGTGGCAAGTCACGCAACAACGGTAGCCACTATGCTGGCAATGGTCATCAGCCGCAGCATCAGTCGTCGCAGCAGCATCATCATCAGCAGCAACAACAACATCAACAACAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCCGGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGGAAACGTTCGGATGTC                                                                                                                                                                                  ]
[+] EMBL BM602780             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ccGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCACGCCACGGATACGATCGTACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCACCAGCAGCAGCAGCAGCAGCAGCAGATGCAGCAGCGACATCATCAAGAGATGCAATCACGTCCCACCGGCGACTACTACACGCAGGATCGTCGTGGCAAGTCACGCAACAACGGTAGCCACTATGCTGGCAATGGTCATCAGCCGCAGCATCAGTCGTCGCAGCAGCATCATCATCAGCAGCAACAGCAACATCAACAGCAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCC GGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGG AACGTTCGGATGTCTTTTCAGGCTTCCTCTGTCCTTAGTGTTTAGGGAAAATCGGGAGACGACAGGGGTTCAGTTTGTAACGCATAAGCTGAACGTGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAAACATTCCAAAACGTGGCAAGGATATAAAAAAACAACAACTAAATACTCCTCAGACAT]


>consensus_8710#1 CGGCGAAATTGGAGCTGACACTGCACAACCTGATGGTGAATAACCTTTCCTCGGGTAAGG TGGGTGCCTTCTCCGTAGATCCCACGTATCTGGAGTTTACCCAACTGGAAGGACAAGCAT CGTCGCCCAAGGAAGAGTATGAGCTATTGCCAGCCGGTGTACGTCTCTATCTGATTCTGG GATGCATTGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCATCATCAAAA CACGACGCACCAATCGATTGAAGGATCAGCTAATCCCCAACTCGGCGTGGAAGGATTACT CCTCCAACACCAACTACGCGTTCGATAACTTTGAGCCAGAGTCGAAGCACCACAAGGGGC GCTCCTCCGACCGCGGCTACAGCAATGGCAACAGTCAGCAAACCACGCTGCAGATGTCCC ACTCCCCCAACAAGTCGCAGTACTACGAGATCGATCGTACGGATGGTGGCGGTATGCCGA CGCATCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCACGCCACGGATACG ATCGTACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGC ACCAGCAGCAGCAGCAGCAGCAGCAGATGCAGCAGCGACATCATCAAGAGATGCAATCAC GTCCCACCGGCGACTACTACACGCAGGATCGTCGTGGCAAGTCACGCAACAACGGTAGCC ACTATGCTGGCAATGGTCATCAGCCGCAGCATCAGTCGTCGCAGCAGCATCATCATCAGC AGCAACAACAACATCAACAACAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTA CGCCAACGCAGCGAAAGTACTCCGGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAG GACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGGAAACGTTCGGATGTCTTTTCA GGCTTCCTCTGTCCTTAGTGTTTAGGGAAAATCGGGAGACGACAGGGGTTCAGTTTGTAA CGCATAAGCTGAACGTGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAAACATT CCAAAACGTGGCAAGGATATAAAAAAACAACAACTAAATACTCCTCAGACAT



consensusID : consensus_8710#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 830
fasta sequence
                              [GAATTGCCCAGGATTATAGTTGCCAAGGGAAGAGTATGAGCTACTGCAGCGGTGTACGTCTCTATCTGATTCTGGGATGCATTGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCATCATCAAAANACGACGCACCAATCGATTGAAGTCATCAGCTTATCCNCAACTCGGCGTGGAAGGATTACTCCGTCCAAACCAAGCTACGCGTTCGAGTAACTTTGAGCCAGAGTCGATAGCACCACAAGGGGTCGCTCCTCCGACCGTGGTACAGCAATGGCAAGCAGTCAGGAAACCATCGCTGCAGATTGTCGCACTTCCCCCAAACAATGTCGCAGTACTACCGAGATTGATCTGTACGGATTGGTGGCCGGTTATTGCCGACGCATCGGAATTGGGCAGCTCGGGCTTATCCTTAACCATCGCGGAACAAAACCGGTCGCNCTACAGTGATTACAGATCCGTACGCAGGGAGACCGTTCTTCCGTTACCTGCCTGGAGCCTGCGCTATTACATTCAGCTTAAACCGCCCGTCACCAATGGCANCCAAGCCATGCAGGCCTAGGCCAAGNCTAGGCTAGAATTGTCGACGCAAGCCTGGACCATTCCATTCCAAACGCACGAATTGCAAATTCACGTTCCACTCCAAGCACCCGGGGCGTCAATCTTATACCTTAAACAAACTGACCAATGACGGAAAGTTCCAGGTATCCGCTTGCGGCCGAAAAGGGTTCCAACTGGGCACAAAGCCAAAGATCCGCAGGCTTAAAGNACACCAAACCGATAATTTGGCNCTTGGGTGCCCACAAATNGGGGGGTTCCA]

[+] EMBL AL697302             [GAATTGCCCAGGATTATAGTTGCCAAGGGAAGAGTATGAGCTACTGCAGCGGTGTACGTCTCTATCTGATTCTGGGATGCATTGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCATCATCAAAANACGACGCACCAATCGATTGAAGTCATCAGCTTATCCNCAACTCGGCGTGGAAGGATTACTCCGTCCAAACCAAGCTACGCGTTCGAGTAACTTTGAGCCAGAGTCGATAGCACCACAAGGGGTCGCTCCTCCGACCGTGGTACAGCAATGGCAAGCAGTCAGGAAACCATCGCTGCAGATTGTCGCACTTCCCCCAAACAATGTCGCAGTACTACCGAGATTGATCTGTACGGATTGGTGGCCGGTTATTGCCGACGCATCGGAATTGGGCAGCTCGGGCTTATCCTTAACCATCGCGGAACAAAACCGGTCGCNCTACAGTGATTACAGATCCGTACGCAGGGAGACCGTTCTTCCGTTACCTGCCTGGAGCCTGCGCTATTACATTCAGCTTAAACCGCCCGTCACCAATGGCANCCAAGCCATGCAGGCCTAGGCCAAGNCTAGGCTAGAATTGTCGACGCAAGCCTGGACCATTCCATTCCAAACGCACGAATTGCAAATTCACGTTCCACTCCAAGCACCCGGGGCGTCAATCTTATACCTTAAACAAACTGACCAATGACGGAAAGTTCCAGGTATCCGCTTGCGGCCGAAAAGGGTTCCAACTGGGCACAAAGCCAAAGATCCGCAGGCTTAAAGNACACCAAACCGATAATTTGGCNCTTGGGTGCCCACAAATNGGGGGGTTCCA]


>consensus_8710#2 GAATTGCCCAGGATTATAGTTGCCAAGGGAAGAGTATGAGCTACTGCAGCGGTGTACGTC TCTATCTGATTCTGGGATGCATTGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTT GCACCATCATCAAAANACGACGCACCAATCGATTGAAGTCATCAGCTTATCCNCAACTCG GCGTGGAAGGATTACTCCGTCCAAACCAAGCTACGCGTTCGAGTAACTTTGAGCCAGAGT CGATAGCACCACAAGGGGTCGCTCCTCCGACCGTGGTACAGCAATGGCAAGCAGTCAGGA AACCATCGCTGCAGATTGTCGCACTTCCCCCAAACAATGTCGCAGTACTACCGAGATTGA TCTGTACGGATTGGTGGCCGGTTATTGCCGACGCATCGGAATTGGGCAGCTCGGGCTTAT CCTTAACCATCGCGGAACAAAACCGGTCGCNCTACAGTGATTACAGATCCGTACGCAGGG AGACCGTTCTTCCGTTACCTGCCTGGAGCCTGCGCTATTACATTCAGCTTAAACCGCCCG TCACCAATGGCANCCAAGCCATGCAGGCCTAGGCCAAGNCTAGGCTAGAATTGTCGACGC AAGCCTGGACCATTCCATTCCAAACGCACGAATTGCAAATTCACGTTCCACTCCAAGCAC CCGGGGCGTCAATCTTATACCTTAAACAAACTGACCAATGACGGAAAGTTCCAGGTATCC GCTTGCGGCCGAAAAGGGTTCCAACTGGGCACAAAGCCAAAGATCCGCAGGCTTAAAGNA CACCAAACCGATAATTTGGCNCTTGGGTGCCCACAAATNGGGGGGTTCCA



consensusID : consensus_8710#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 748
fasta sequence
                              [CGCCCGAGGTTAACGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTACAGACTTCCTACTGTCCTTAGTGTTTAGTGGAAAACCTGGCGGATGACAGGCGTTCAGTTTGTAACGCATAAGCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTNAACCACTCAACCATTCCAAAACGTGCAAAGGATATANAACAAAAACAAGAAGTAAATACGTCCTCAGACATGTCTCCTCAGAATGGGNGAATGCAGCAGCGCAATGCAAACGGCGCACATTCAACGCCACTGTACTATANTATGTTCTTTACCCCCACTATATCTATATAANCNTAGTAAATCAGTTGTCCCAATTATTCGTAAANCACCACCATCGACACGTTACGTACACGTCCAAGGCACTTTGGTGTNTGCCGGTATGGTGCTAGNNAATTAAACAGAANAAGATTCAATGAANGNGTTATATAATAGAAANAGANCNGCATACTNGGTATGGTTAGTAAANATGTGGACTAACGNAAAAGGAAAACAGGAAGCACGGCTTGGCGCCAACTTGCNATTGNCCACAAAGACTATCCCCCCCCAGCAAAATGGNGGAATTTCGTTNCTGGCCACGAGCAAGGATTCCCAAGGTGCNCTCNTGCAAGTTGGCCACCAAGGAGTGTATTACATTTACTCCGTACTACGTATGCTCGNGCTCCTAGGGGTATACCNGCAGNGTGTANATAAAGGANCCACTTGGCAAGA]

[+] EMBL AL933133             [CGCCCGAGGTTAACGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTACAGACTTCCTACTGTCCTTAGTGTTTAGTGGAAAACCTGGCGGATGACAGGCGTTCAGTTTGTAACGCATAAGCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTNAACCACTCAACCATTCCAAAACGTGCAAAGGATATANAACAAAAACAAGAAGTAAATACGTCCTCAGACATGTCTCCTCAGAATGGGNGAATGCAGCAGCGCAATGCAAACGGCGCACATTCAACGCCACTGTACTATANTATGTTCTTTACCCCCACTATATCTATATAANCNTAGTAAATCAGTTGTCCCAATTATTCGTAAANCACCACCATCGACACGTTACGTACACGTCCAAGGCACTTTGGTGTNTGCCGGTATGGTGCTAGNNAATTAAACAGAANAAGATTCAATGAANGNGTTATATAATAGAAANAGANCNGCATACTNGGTATGGTTAGTAAANATGTGGACTAACGNAAAAGGAAAACAGGAAGCACGGCTTGGCGCCAACTTGCNATTGNCCACAAAGACTATCCCCCCCCAGCAAAATGGNGGAATTTCGTTNCTGGCCACGAGCAAGGATTCCCAAGGTGCNCTCNTGCAAGTTGGCCACCAAGGAGTGTATTACATTTACTCCGTACTACGTATGCTCGNGCTCCTAGGGGTATACCNGCAGNGTGTANATAAAGGANCCACTTGGCAAGA]


>consensus_8710#3 CGCCCGAGGTTAACGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTACAGACTTCCTA CTGTCCTTAGTGTTTAGTGGAAAACCTGGCGGATGACAGGCGTTCAGTTTGTAACGCATA AGCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTNAACCACTCAACCATTCCAAA ACGTGCAAAGGATATANAACAAAAACAAGAAGTAAATACGTCCTCAGACATGTCTCCTCA GAATGGGNGAATGCAGCAGCGCAATGCAAACGGCGCACATTCAACGCCACTGTACTATAN TATGTTCTTTACCCCCACTATATCTATATAANCNTAGTAAATCAGTTGTCCCAATTATTC GTAAANCACCACCATCGACACGTTACGTACACGTCCAAGGCACTTTGGTGTNTGCCGGTA TGGTGCTAGNNAATTAAACAGAANAAGATTCAATGAANGNGTTATATAATAGAAANAGAN CNGCATACTNGGTATGGTTAGTAAANATGTGGACTAACGNAAAAGGAAAACAGGAAGCAC GGCTTGGCGCCAACTTGCNATTGNCCACAAAGACTATCCCCCCCCAGCAAAATGGNGGAA TTTCGTTNCTGGCCACGAGCAAGGATTCCCAAGGTGCNCTCNTGCAAGTTGGCCACCAAG GAGTGTATTACATTTACTCCGTACTACGTATGCTCGNGCTCCTAGGGGTATACCNGCAGN GTGTANATAAAGGANCCACTTGGCAAGA



consensusID : consensus_8710#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 672
fasta sequence
                              [GCAGAATTCGGCACGAGGTCGGAGTATTCGTCGACTACAACAAGGCACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTTTAGGGAAAAACCTGGGGATGACCAAGGGGGGTATCAAGGTTTGTAACGGCAATAAAGGCTTGAAACGCGGGGCACGGTTGACTTGGTTGGTTCAACCAAATTGCCGGTTACCAGCTTCAAGCCATTTCCAAAAACCGGTTGGCAAAAGGGATTATTAACAACCAGAGAAANCACAGAAGGTTAGANTTAGCTTCCTTACAAGGAAACCAATTAGTTCTTCCCTTTCAGANAATTNGGGGGGAAATTGNAGCCCAAGGTCGGCCAAAAATGCAAAAACCGGGNGCTCGGCCAANCAATTTTCAAAGCACCCANACATTGTTAATTAATTCAAGTAACTGGGTTATATATNAAACCCACNAATTTAGTAGCCATTNTAGATTATACACAGGGGGTATATCCAACNTTATTATCCCCAAATTTTGTTTAAAAATATCCACCACCNCCATTTTCATAANCAAAGAGATTACGATTCCGCATTTATCCCAAAAGAGTCCAAAGTTTATGGANATATATNATAGACACAGTTATTACAGTATATCAGATTAA]

[+] EMBL BX468740             [GCAGAATTCGGCACGAGGTCGGAGTATTCGTCGACTACAACAAGGCACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTTTAGGGAAAAACCTGGGGATGACCAAGGGGGGTATCAAGGTTTGTAACGGCAATAAAGGCTTGAAACGCGGGGCACGGTTGACTTGGTTGGTTCAACCAAATTGCCGGTTACCAGCTTCAAGCCATTTCCAAAAACCGGTTGGCAAAAGGGATTATTAACAACCAGAGAAANCACAGAAGGTTAGANTTAGCTTCCTTACAAGGAAACCAATTAGTTCTTCCCTTTCAGANAATTNGGGGGGAAATTGNAGCCCAAGGTCGGCCAAAAATGCAAAAACCGGGNGCTCGGCCAANCAATTTTCAAAGCACCCANACATTGTTAATTAATTCAAGTAACTGGGTTATATATNAAACCCACNAATTTAGTAGCCATTNTAGATTATACACAGGGGGTATATCCAACNTTATTATCCCCAAATTTTGTTTAAAAATATCCACCACCNCCATTTTCATAANCAAAGAGATTACGATTCCGCATTTATCCCAAAAGAGTCCAAAGTTTATGGANATATATNATAGACACAGTTATTACAGTATATCAGATTAA]


>consensus_8710#4 GCAGAATTCGGCACGAGGTCGGAGTATTCGTCGACTACAACAAGGCACAAGAAGTAAACC GTGCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTCCTCTGTCCTT AGTGTTTAGGGAAAAACCTGGGGATGACCAAGGGGGGTATCAAGGTTTGTAACGGCAATA AAGGCTTGAAACGCGGGGCACGGTTGACTTGGTTGGTTCAACCAAATTGCCGGTTACCAG CTTCAAGCCATTTCCAAAAACCGGTTGGCAAAAGGGATTATTAACAACCAGAGAAANCAC AGAAGGTTAGANTTAGCTTCCTTACAAGGAAACCAATTAGTTCTTCCCTTTCAGANAATT NGGGGGGAAATTGNAGCCCAAGGTCGGCCAAAAATGCAAAAACCGGGNGCTCGGCCAANC AATTTTCAAAGCACCCANACATTGTTAATTAATTCAAGTAACTGGGTTATATATNAAACC CACNAATTTAGTAGCCATTNTAGATTATACACAGGGGGTATATCCAACNTTATTATCCCC AAATTTTGTTTAAAAATATCCACCACCNCCATTTTCATAANCAAAGAGATTACGATTCCG CATTTATCCCAAAAGAGTCCAAAGTTTATGGANATATATNATAGACACAGTTATTACAGT ATATCAGATTAA



consensusID : consensus_8710#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 585
fasta sequence
                              [GCTCGAGCAGATCGGCCGAGGAGTTNACCATGCCCGATTCTCCGACCTTTACTTTACGCCAANGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTTTAGGGAAAACCTGGGGATGACAGGGGTTCAGTTTGTAACGCATAAGCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAACATTCCAAAACGTGCAANAGGATATAAAAAAAAACAAGAAGTAANATACTCCTCAGACATGTCTCCTCAGAATGGGGACTGAGCATGCGCAATGAAACGGCGCACATTCAAACCACTGTATATAATATGTATTCTTACCCATTTCTTGTTANGTTTCATNTTCCATTTTTTAAACCCCCTCACACTAATCCTCCAGCATTGTATGCGTAGTATCNTTCAACTAACACGGAACAANACTTATGAGTTNTATTCTCTGCGAACTGTGTGTAAAGGACAGAAGGACGACGCTGCATGCT]

[+] EMBL AL696713             [GCTCGAGCAGATCGGCCGAGGAGTTNACCATGCCCGATTCTCCGACCTTTACTTTACGCCAANGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTCCTCTGTCCTTAGTGTTTAGGGAAAACCTGGGGATGACAGGGGTTCAGTTTGTAACGCATAAGCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAACATTCCAAAACGTGCAANAGGATATAAAAAAAAACAAGAAGTAANATACTCCTCAGACATGTCTCCTCAGAATGGGGACTGAGCATGCGCAATGAAACGGCGCACATTCAAACCACTGTATATAATATGTATTCTTACCCATTTCTTGTTANGTTTCATNTTCCATTTTTTAAACCCCCTCACACTAATCCTCCAGCATTGTATGCGTAGTATCNTTCAACTAACACGGAACAANACTTATGAGTTNTATTCTCTGCGAACTGTGTGTAAAGGACAGAAGGACGACGCTGCATGCT]


>consensus_8710#5 GCTCGAGCAGATCGGCCGAGGAGTTNACCATGCCCGATTCTCCGACCTTTACTTTACGCC AANGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAA GAAGTAAACCGTGCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTC CTCTGTCCTTAGTGTTTAGGGAAAACCTGGGGATGACAGGGGTTCAGTTTGTAACGCATA AGCTGAACGCGGGCACGTGACTGGTGGTCACAATGCCGTTACCACTCAACATTCCAAAAC GTGCAANAGGATATAAAAAAAAACAAGAAGTAANATACTCCTCAGACATGTCTCCTCAGA ATGGGGACTGAGCATGCGCAATGAAACGGCGCACATTCAAACCACTGTATATAATATGTA TTCTTACCCATTTCTTGTTANGTTTCATNTTCCATTTTTTAAACCCCCTCACACTAATCC TCCAGCATTGTATGCGTAGTATCNTTCAACTAACACGGAACAANACTTATGAGTTNTATT CTCTGCGAACTGTGTGTAAAGGACAGAAGGACGACGCTGCATGCT



consensusID : consensus_8710#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 494
fasta sequence
                              [GAGGCAGAATTCGGCACGATGGACACATCAACAACAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGGACAAGAAGTAAACCTGTGCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTTCTTCTGGTCCTTAGGTGTTTAGGGAAAACCTGGGGGGATGACAGGGGTTCAGGTTTTGTAACCGCCATAAGCTTGAACGCGGGCCACCGTGACCTTGGTGGTCACCACAATGCCGTTTACCAACGTCAAAGCCATTTCCCAAAAACGTTGCCACAGGATATTCACAACAAACACCAACGCACAGTTCAAAATTACTTCCCTTCAGACCATTGTTCTCCCTCAGAAAATGGGGAAATTANCCACAGCGNCAAATTGNGAAAACCGGGGCGNCCACACATTTCNAAGACCCAACTT]

[+] EMBL BX468162             [GAGGCAGAATTCGGCACGATGGACACATCAACAACAACAGCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGGACAAGAAGTAAACCTGTGCAACCGTTGCTAGTCCTTCGGAACGTTCGGATGTCTTTTCAGACTTTCTTCTGGTCCTTAGGTGTTTAGGGAAAACCTGGGGGGATGACAGGGGTTCAGGTTTTGTAACCGCCATAAGCTTGAACGCGGGCCACCGTGACCTTGGTGGTCACCACAATGCCGTTTACCAACGTCAAAGCCATTTCCCAAAAACGTTGCCACAGGATATTCACAACAAACACCAACGCACAGTTCAAAATTACTTCCCTTCAGACCATTGTTCTCCCTCAGAAAATGGGGAAATTANCCACAGCGNCAAATTGNGAAAACCGGGGCGNCCACACATTTCNAAGACCCAACTT]


>consensus_8710#6 GAGGCAGAATTCGGCACGATGGACACATCAACAACAACAGCGACCCATGCCCGATTCCTC CGACCTTTACTTTACGCCAACGCAGCGAAAGTACTCCGGTGAGGTCGTGCGGGTATTCGT CGACTACAACAAGGGACAAGAAGTAAACCTGTGCAACCGTTGCTAGTCCTTCGGAACGTT CGGATGTCTTTTCAGACTTTCTTCTGGTCCTTAGGTGTTTAGGGAAAACCTGGGGGGATG ACAGGGGTTCAGGTTTTGTAACCGCCATAAGCTTGAACGCGGGCCACCGTGACCTTGGTG GTCACCACAATGCCGTTTACCAACGTCAAAGCCATTTCCCAAAAACGTTGCCACAGGATA TTCACAACAAACACCAACGCACAGTTCAAAATTACTTCCCTTCAGACCATTGTTCTCCCT CAGAAAATGGGGAAATTANCCACAGCGNCAAATTGNGAAAACCGGGGCGNCCACACATTT CNAAGACCCAACTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8710#0      TGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACCTATCATCAAAACACGAC 60
consensus_8710#5      ------------------------------------------------------------
consensus_8710#4      ------------------------------------------------------------
consensus_8710#6      ------------------------------------------------------------
consensus_8710#3      ------------------------------------------------------------
consensus_8710#1      ------------------------------------------------------------
consensus_8710#2      ------------------------------------------------------------
                                                                                  

consensus_8710#0      GCACCAATCGATTGAAGGATCAGCTAATCCCCAACTCGGCGTGGAAGGATTACTCCTCCA 120
consensus_8710#5      ------------------------------------------------------------
consensus_8710#4      ------------------------------------------------------------
consensus_8710#6      ------------------------------------------------------------
consensus_8710#3      ------------------------------------------------------------
consensus_8710#1      ------------------------------------------------------------
consensus_8710#2      ------------------------------------------------------------
                                                                                  

consensus_8710#0      ACACCATACTACGCGTTCGATAACTTTGAGCCAGAGTCGAAGCACCACAAGGGGCGCTCC 180
consensus_8710#5      ------------------------------------------------------------
consensus_8710#4      ------------------------------------------------------------
consensus_8710#6      ------------------------------------------------------------
consensus_8710#3      ------------------------------------------------------------
consensus_8710#1      ---------------------------CGGCGAAATTGGAGCTGACACTGCACAACCTGA 33
consensus_8710#2      ------------------------------------------------------------
                                                                                  

consensus_8710#0      TCCGACCGCGGCTACAGCAATGGCAACAGTCGGCAAACCACGCTGCAGATGTCGCACTCC 240
consensus_8710#5      ------------------------------------------------------------
consensus_8710#4      ------------------------------------------------------------
consensus_8710#6      ------------------------------------------------------------
consensus_8710#3      ------------------------------------------------------------
consensus_8710#1      TGGTGAATAACCTTTCCTCGGGTAAGGTGGGTGCCTTCTCCGTAGATCCCACGTATCTGG 93
consensus_8710#2      ------------------------------------------------------------
                                                                                  

consensus_8710#0      CCCAACAAGTCGCAGTACTACGAGATTGATCGTACGTGATGGTGGCGGTATGCCGACGCA 300
consensus_8710#5      ------------------------------------------------------------
consensus_8710#4      ------------------------------------------------------------
consensus_8710#6      ------------------------------------------------------------
consensus_8710#3      ------------------------------------------------------------
consensus_8710#1      AGTTTACCCAACTGGAAGGACAAGCATCGTCGCCCAAGGAAGAGTATGAGCTATTGCCAG 153
consensus_8710#2      ------------------------------------------------------------
                                                                                  

consensus_8710#0      TCGGAATGGCAGCTCGGGCTATCCTTACCCACCCGGACAACCGCGCCACGGATACGATCG 360
consensus_8710#5      ------------------------------------------------------------
consensus_8710#4      ------------------------------------------------------------
consensus_8710#6      ------------------------------------------------------------
consensus_8710#3      ------------------------------------------------------------
consensus_8710#1      CCGGTGTACGTCTCTATCTGATTCTGGGATGCATTGCCGGTTTGGTGTTCATTGCCATCG 213
consensus_8710#2      ------------------------------------------------------------
                                                                                  

consensus_8710#0      TACCGGAGACCGTTCTTCGTACGCTGACCGCGCATACTCACTACCCCGTCCAATGCACCA 420
consensus_8710#5      ------------------------------------------------------------
consensus_8710#4      ------------------------------------------------------------
consensus_8710#6      ---------------------------------------------------GAGGCAGAA 9
consensus_8710#3      ------------------------------------------------------------
consensus_8710#1      TTCAGGCTACTTGCACCATCATCAAAACACGACGCACCAATCGATTGAAGGATCAGCTAA 273
consensus_8710#2      ------------------------------------------------------GAATTG 6
                                                                                  

consensus_8710#0      GCAGCAGCAACAGCAACATCAACAGCAACAGCGAC-CCATGCCCGATTCCTCCGACCTTT 479
consensus_8710#5      ------GCTCGAGCAG-ATCGGCCG-AGGAGTTNA-CCATGCCCGATTC-TCCGACCTTT 50
consensus_8710#4      ------------------------------------------------------------
consensus_8710#6      TTCGGCACGATGGACACATCAACAACAACAGCGAC-CCATGCCCGATTCCTCCGACCTTT 68
consensus_8710#3      ------------CGCCCGAGGTTAACGTTGCTAGT-CCTTCGGAACGTTCGGATGTCTTT 47
consensus_8710#1      TCCCCAACTCGGCGTGGAAGGATTACTCCTCCAACACCAACTACGCGTTCGATAACTTTG 333
consensus_8710#2      CCCAGGATTATAGTTGCCAAGGGAAGAGTATGAGC-TACTGCAGCGGTGTACGTCTCTAT 65
                                                                                  

consensus_8710#0      ACTTTACGCCAACGCAGCGAAAGTA------CTCCG-GTGAGGTCGTGCGGGTATTCGTC 532
consensus_8710#5      ACTTTACGCCAANGCAGCGAAAGTA------CTCCG-GTGAGGTCGTGCGGGTATTCGTC 103
consensus_8710#4      -------------------GCAGAA------TTCGGCACGAGGTCG---GAGTATTCGTC 32
consensus_8710#6      ACTTTACGCCAACGCAGCGAAAGTA------CTCCG-GTGAGGTCGTGCGGGTATTCGTC 121
consensus_8710#3      TACAGACTTCCTACTGTCCTTAGTG------TTTAGTGGAAAACCTGGCGGATGACAGGC 101
consensus_8710#1      AGCCAGAGTCGAAGCACCACAAGGGGCGCTCCTCCGACCGCGGCTACAGCAATGGCAACA 393
consensus_8710#2      CTGATTCTGGGATGCATTGCCGGTTTGGTGTTCATTGCCATCGTTCAGGCTACTTGCACC 125
                                            *                                     

consensus_8710#0      GAC--TACAACAAGG-ACAAGAAGTAAACCGTGCCAACCG-TTGCTAGTCCTTCGGAA-C 587
consensus_8710#5      GAC--TACAACAAGG-ACAAGAAGTAAACCGTGC-AACCG-TTGCTAGTCCTTCGGAA-C 157
consensus_8710#4      GAC--TACAACAAGGCACAAGAAGTAAACC-GTGCAACCG-TTGCTAGTCCTTCGGAA-C 87
consensus_8710#6      GAC--TACAACAAGGGACAAGAAGTAAACCTGTGCAACCG-TTGCTAGTCCTTCGGAA-C 177
consensus_8710#3      GTT--CAGTTTGTAACGCATAAGCTGAACGCGGGCA--CG-TGACTGGTGGT-CACAA-T 154
consensus_8710#1      GTCAGCAAACCACGCTGCAGATGTCCCACTCCCCCAACAA-GTCGCAGTACTACGAGATC 452
consensus_8710#2      ATCATCAAAANACGACGCACCAATCGATTGAAGTCATCAGCTTATCCNCAACTCGGCGTG 185
                            *          **                *                 *      

consensus_8710#0      GTTCGGATG--TCTTTTCAGACTTCCTCT--GTCCTTA-GTGTTATAGGGAAAA-CC-TG 640
consensus_8710#5      GTTCGGATG--TCTTTTCAGACTTCCTCT--GTCCTTA-GTGTT-TAGGGAAAA-CC-TG 209
consensus_8710#4      GTTCGGATG--TCTTTTCAGACTTCCTCT--GTCCTTA-G-TGTTTAGGGAAAAACC-TG 140
consensus_8710#6      GTTCGGATG--TCTTTTCAGACTTTCTTCTGGTCCTTA-GGTGTTTAGGGAAAA-CC-TG 232
consensus_8710#3      GC-CGTNAA--CCACTCAACCATTCCAAAACGTGCAAA-G-GATATANAACAAAAAC-AA 208
consensus_8710#1      GATCGTACGGATGGTGGCGGTATGCCGACGCATCGGAATGGCAGCTCGGGCTATCCT-TA 511
consensus_8710#2      GAAGGATTACTCCGTCCAAACCAAGCTACGCGTTCGAGTAACTTTGAGCCAGAGTCGATA 245
                      *   *                    *      *                   *       

consensus_8710#0      G------GGATGACAG-----------GGGTTCAGTTTGTAACGCATAAGNCTGAACGCG 683
consensus_8710#5      G------GGATGACAG-----------GGGTTCAGTTTGTAACGCATAAGC-TGAACGCG 251
consensus_8710#4      G------GGATGACCA--------AGGGGGGTA---TCAAGGTTTGTAACG---GCAATA 180
consensus_8710#6      G------GG--GGATG--------ACAGGGGT----TCAGGTTTTGTAACC---GCCATA 269
consensus_8710#3      G------AAGTAAATACGTCCTC-AGACATGTCTCCTCAGAATGGGNGAAT---GCAGCA 258
consensus_8710#1      CCCACCCGGACAACCACGCCACG-GATACGATCGTACCGGAGACCGTTCTTCGTACGCTG 570
consensus_8710#2      GCACCACAAGGGGTCGCTCCTCCGACCGTGGTACAGCAATGGCAAGCAGTCAGGAAACCA 305
                                                     *                            

consensus_8710#0      GGCACGTGACT-GGTGGTCACAATGCCGTTACCACTCAACCATTCCAAAACGTGCAAA-G 741
consensus_8710#5      GGCACGTGACT-GGTGGTCACAATGCCGTTACCACTCAAC-ATTCCAAAACGTGCAANAG 309
consensus_8710#4      AAGGCTTGAAA-CGCGG-GGCACGGTTGACTTGGTTG-GTTCAACCAAATTGCCGGTTAC 237
consensus_8710#6      A--GCTTGAA--CGCGG-GCCACCGT-GACCTTGGTG-GTC--ACCACAATGCCGTTTAC 320
consensus_8710#3      GCGCAATGCA--AACGG-CGCACATTCAACGCCACTGTACTATANTATGTTCTTTACCCC 315
consensus_8710#1      ACCGCGCATACTCACTACCCCGTCCAATGCACCAGCAGCAGCAGCAGCAGCAGCAGATGC 630
consensus_8710#2      TCGCTGCAGATTGTCGCACTTCCCCCAAACAATGTCGCAGTACTACCGAGATTGATCTGT 365
                                                                                  

consensus_8710#0      GA-TATAAAAAAAAACAAGAAGTAAA-TACTCCTCA--GACATGTCTCCTCAGAATGGGG 797
consensus_8710#5      GA-TATAAAAAAAAACAAGAAGTAANATACTCCTCA--GACATGTCTCCTCAGAATGGGG 366
consensus_8710#4      CA--GCTTCAA-GCCATTTCCAAAAACCGGTTGGCA--AAAGGGATTATTAACAACCAGA 292
consensus_8710#6      CA--ACGTCAAAGCCATTTCCCAAAAACG-TTGCCA--CAGGA---TATTCACAACAAAC 372
consensus_8710#3      CACTATATCTATATAANCNTAGTAAATCAGTTGTCC--CAATTATTCGTAAANCACCACC 373
consensus_8710#1      AGCAGCGACATCATCAAGAGATGCAATCACGTCCCA--CCGGCGACTACT-ACACGCAGG 687
consensus_8710#2      ACGGATTGGTGGCCGGTTATTGCCGACGCATCGGAATTGGGCAGCTCGGGCTTATCCTTA 425
                                                                                  

consensus_8710#0      AATGA-GCA--GCGCAATGAAACGGCG-----CACATTCAACCCACTGTATATAATATGT 849
consensus_8710#5      ACTGA-GCAT-GCGCAATGAAACGGCG-----CACATTCAAACCACTGTATATAATATGT 419
consensus_8710#4      GAAANCACAG-AAGGTTAGANTTAGCT-----TCCTTACAAGGAAACCAATTAGTTCTTC 346
consensus_8710#6      ACCAACGCAC-A-GTTCAAAATTACTT-----CCCTTC-----AGACCA-----TTGTTC 415
consensus_8710#3      ATCGACACGTTACGTACACGTCCAAGG-----CACTTTGGTGTNTGCCGGT--ATGGTGC 426
consensus_8710#1      ATCGTCGTGGCAAGTCACGCAACAACGGTAGCCACTATGCTGGCAATGGTCATCAGCCGC 747
consensus_8710#2      ACCATCGCGGAACAAAACCGGTCGCNCTACAGTGATTACAGATCCGTACGCAGGGAGACC 485
                                                                                  

consensus_8710#0      --TTTTACCCATTTCTTTTT-TGTTTCATTTCCA--TTT----TTAAACCCCCTCACACT 900
consensus_8710#5      ATTCTTACCCATTTCTTGTTANGTTTCATNTTCCATTTT----TTAAACCCCCTCACACT 475
consensus_8710#4      CCTTTCAGANAATTNGGGGGGAAATTGNAGCCCAAGGTCGG--CCAAAAATGCAAAAACC 404
consensus_8710#6      TCCCTCAGAAAAT----GGGGAAATT-ANCCACAGCGNC-------AAATTGNGAAAACC 463
consensus_8710#3      TAGNNAATTAAAC--AGAANAAGATTCAATGAANGNGTTAT--ATAATAGAAANAGANCN 482
consensus_8710#1      AGCATCAGTCGTCGCAGCAGCATCATCATCAGCAGCAACAA--CAACATCAACAACAACA 805
consensus_8710#2      GTTCTTCCGTTACCTGCCTGGAGCCTGCGCTATTACATTCAGCTTAAACCGCCCGTCACC 545
                                               *                                * 

consensus_8710#0      ---ACTCCTCCAGCATTGTTTGCGTTGT------TTTTAAT-------AAAGAAAAATTA 944
consensus_8710#5      ---AATCCTCCAGCATTGTATGCGTAGTA---TCNTTCAACTAACACGGAACAANACTTA 529
consensus_8710#4      ---GGGNGCTCGGCCAANCAATTTTCAAA---GCACCCANA-CATTGTTAATTAATTCAA 457
consensus_8710#6      ---GGGG---CGNCCACACA--TTTCNAA---G-ACCCAAC-TT---------------- 494
consensus_8710#3      ---GCATACTNGGTATGGTTA--GTAAAN---ATGTGGACT-AACGNAAAAGGAAAACAG 533
consensus_8710#1      ---GCGACCCATGCCCGATTCCTCCGACCTTTACTTTACGCCAACGCAGCGAAAGTACTC 862
consensus_8710#2      AATGGCANCCAAGCCATGCAGGCCTAGGCC--AAGNCTAGGCTAGAATTGTCGACGCAAG 603
                                                                                  

consensus_8710#0      TGAGTTTTATTTTGCG---ATTGTGTGTAAAGGACAGAAG-ACGACGCTGCCATGCTGCA 1000
consensus_8710#5      TGAGTTNTATTCTCTGCGAACTGTGTGTAAAGGACAGAAGGACGACGCTGC-ATGCT--- 585
consensus_8710#4      GTAACTGGGTTATATATNAAACCCACNAATTTAGTAGCCATTNTAGATTAT---ACACAG 514
consensus_8710#6      ------------------------------------------------------------
consensus_8710#3      GAAGCACGGCTTGGCGCCAACTTGCNATTGNCCACAAAGACTATCCCCCCC---CAGCAA 590
consensus_8710#1      CGGGTGAGGTCGTGCGGGTATTCGTCGACTACAACAAGGACAAGAAGTAAA-CCGTGCAA 921
consensus_8710#2      CCTGGACCATTCCATTCCAAACGCACGAATTGCAAATTCACGTTCCACTCC-AAGCACCC 662
                                                                                  

consensus_8710#0      AATTCCCAAAGGATTTTGCAGAGTCCAGTTTGATGCCAGTGTCTTTCTTTNGGATAAGGT 1060
consensus_8710#5      ------------------------------------------------------------
consensus_8710#4      GGGGTATATCCAACNTTATTATCCCCAAATTTTGTTTAAAAATATCCACCACCNCCATTT 574
consensus_8710#6      ------------------------------------------------------------
consensus_8710#3      AATGGNGGAATTTCGTTNCTGGCCACGAGCAAGGATTCCCAAGGTGCNCT-CNTGCAAGT 649
consensus_8710#1      CCGTTGCTAGTCCTTCGGAAACGTTCGGATGTCTTTTCAGGCTTCCTCTGTCCTTAGTGT 981
consensus_8710#2      GGGGCGTCAATCTTATACCTTAAACAAACTGACCAATGACGGAAAGTTCCAGGTATCCGC 722
                                                                                  

consensus_8710#0      TCGTTTTAAGCCTGAGGTCTGG-TTTATTTAGCCCAGTCTTTACACATGCAGCAGTAGTA 1119
consensus_8710#5      ------------------------------------------------------------
consensus_8710#4      TCAT---AANCAAAGAGATTAC-GATTCCGCATTTATCCCAAAAGAGTCCAAAGTTTATG 630
consensus_8710#6      ------------------------------------------------------------
consensus_8710#3      TGGC---CACCAAGGAGTGTAT-TACATTTACTCCGTACTACGTATGCTCGN-GCTCCTA 704
consensus_8710#1      TTAGGGAAAATCGGGAGACGACAGGGGTTCAGTTTGTAACGCATAAGCTGAACGTGGGCA 1041
consensus_8710#2      TTGC---GGCCGAAAAGGGTTC-CAACTGGGCACAAAGCCAAAGATCCGCAGGCTTAAAG 778
                                                                                  

consensus_8710#0      GAGAT-ACATTAGCCATGTGTGAATAGGCAAAGCTAGTGTCTA----------------- 1161
consensus_8710#5      ------------------------------------------------------------
consensus_8710#4      GANAT-ATATNATAGACACAGTTATTACAGTATATCAGATTAA----------------- 672
consensus_8710#6      ------------------------------------------------------------
consensus_8710#3      GGGGT-ATACCNGCAGNGTGTANATAAAGGANCCACTTGGCAAGA--------------- 748
consensus_8710#1      CGTGA-CTGGTGGTCACAATGCCGTTACCACTCAAACATTCCAAAACGTGGCAAGGATAT 1100
consensus_8710#2      NACACCAAACCGATAATTTGGCNCTTGGGTGCCCACAAATNGGGGGGTTCCA-------- 830
                                                                                  

consensus_8710#0      --------------------------------
consensus_8710#5      --------------------------------
consensus_8710#4      --------------------------------
consensus_8710#6      --------------------------------
consensus_8710#3      --------------------------------
consensus_8710#1      AAAAAAACAACAACTAAATACTCCTCAGACAT 1132
consensus_8710#2      --------------------------------
                                                      




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)