|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8723#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 929 fasta sequence
[CAAGAATCGGCACGAGGGTTCTATCAGTGACCTTGTGAGACTACGACATCTAGGAAATACTGTCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCG-CCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACATGTCCCGTATCAGTATAAGAATGCTCATCAATCAGCACACTATACTGTTT-GGTGATATACCG-AGACAGGACGCCATATCGGTAGCATAGATCCTCTATGTGATCCGCACATGGGTCCGTACGGGATGCTTACGAAAATGCACGTGTGTCTATGTGATCAANATTATCTTGCAAGTCCAGAAACTCGAAGTTAACTAGAAGCATAATGGCAGGCATTTGATAAGGGGAAAACCCCCATTAAAAACTGGGTGTATGTTAGCCAATCCGCAATCCTGGTTTCNCACCATGGCGNGGTTCTCGCAGGCTATATTGCGAGGACACNCCAAGNTGCGTNGGCCTTCGTAATNGGAGCCTTCACTGGGAACCAGGANAACAGGGATTGTTGGGCCTCCCAG]
[+] EMBL BX467330 [CAAGAATCGGCACGAGGGTTCTATCAGTGACCTTGTGAGACTACGACATCTAGGAAATACTGTCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCG CCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACATGTCCCGTATCAGTATAAGAATGCTCATCAATCAGCACACTATACTGTTT GGTGATATACCG AGACAGGACGCCATATCGGTAGCATAGATCCTCTATGTGATCCGCACATGGGTCCGTACGGGATGCTTACGAAAATGCACGTGTGTCTATGTGATCAANATTATCTTGCAAGTCCAGAAACTCGAAGTTAACTAGAAGCATAATGGCAGGCATTTGATAAGGGGAAAACCCCCATTAAAAACTGGGTGTATGTTAGCCAATCCGCAATCCTGGTTTCNCACCATGGCGNGGTTCTCGCAGGCTATATTGCGAGGACACNCCAAGNTGCGTNGGCCTTCGTAATNGGAGCCTTCACTGGGAACCAGGANAACAGGGATTGTTGGGCCTCCCAG]
[+] EMBL BX619099 [ angGTGAAATTGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGANGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTNNCTGGATCGTTTGTACATGTCCCGTATCAGTATAAGAATGCTCATCAATCAGCACACTATACTGTTTGGGTGATATACCGCAGACNGGACGCCATATCNGNAGCATAGATCCTCTATGTGATCCGCACAT GGT CNTACCGGATGCTTACGAAAATGCACGT TNTCTATG ]
consensusID : consensus_8723#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 864 fasta sequence
[CCGAAATCAGTAAACATTGAATCAGTTACCACAATATCGAAAGAAAAATAAATACATATCGAGCAGTGCATCAGCAATTATCAGTACGCACAGTGACAAGTTAACACCTCGCATAAAGCGGTGTGTGTTACCCAAAGTGGCACTCGTTTTCGAAAAGAAGTGAAAAACTCCCAACGCGGAACCTTCTCTACTTGTACCGCAACAACTCTTGACTAGATCTAGAGACTAGATGAGTTCGTCTGGTGACTGTGTTCTATCAGTGACCTTGTGAGACTACGACATCTAGGAAATACTGTCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTGCGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACATGTCCCGTATCAGTATAAGAATGCTCATCAATCAGCACACTATACTGTTTGGTGATATACCGCAGACAGGACGCCATATCGGTAGCATAGATCCTC]
[+] EMBL BM584155 [CCGAAATCAGTAAACATTGAATCAGTTACCACAATATCGAAAGAAAAATAAATACATATCGAGCAGTGCATCAGCAATTATCAGTACGCACAGTGACAAGTTAACACCTCGCATAAAGCGGTGTGTGTTACCCAAAGTGGCACTCGTTTTCGAAAAGAAGTGAAAAACTCCCAACGCGGAACCTTCTCTACTTGTACCGCAACAACTCTTGACTAGATCTAGAGACTAGATGAGTTCGTCTGGTGACTGTGTTCTATCAGTGACCTTGTGAGACTACGACATCTAGGAAATACTGTCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTGCGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAG ]
[+] EMBL BM652737 [ ccgCCCAAAGTGGCACTCGTTTTCGAAAAGAAGTGAAAAACTCCCAACGCGGAACCTTCTCTACTTGTACCGCAACAACTCTTGACTAGATCTAGAGACTAGATGAGTTCGTCTGGTGACTGTGTTCTATCAGTGACCTTGTGAGACTACGACATCTAGGAAATACTGTCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTGCGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTG ]
[+] EMBL BM646272 [ ccgAAAACTCCCAACGCGGAACCTTCTCCACTTGTACCGCAACAACTCTTGACTAGATCTAGAGACTAGATGAGTTCGTCTGGTGACTGTGTTCTATCAGTGACCTTGTGAGACTACGACATCTAGGAAATACTGTCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACATGTCCCGTATCAGTATAAGAATGCTCATCAATCAGCACACTATACTGTTTGGTGATATACCGCAGACAGGACGCCATATCGGTAGCATAGATCCTC]
consensusID : consensus_8723#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 695 fasta sequence
[CCGCGGACGCGTGGGACATATCGAGCAGTGCATCAGCAATTATCAGTACGCACAGTGACAAGTTAACACCTCGCATAAAGCGGTGTGTGTTACCCAAAGTGGCACTCGTTTTCGAAAAGAAGTGAAAAACTCCCAACGCGGAACCTTCTCCACTTGTACCGCAACAACTCTTGACTAGATCTAGAGACTAGATGAGTTCGTCTGGTGACTGTGTTCTATCAGTGACCTTGTGAGACTACGACATCTAGGAAATACTGTCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGA]
[+] EMBL BM631799 [CCGCGGACGCGTGGGACATATCGAGCAGTGCATCAGCAATTATCAGTACGCACAGTGACAAGTTAACACCTCGCATAAAGCGGTGTGTGTTACCCAAAGTGGCACTCGTTTTCGAAAAGAAGTGAAAAACTCCCAACGCGGAACCTTCTCCACTTGTACCGCAACAACTCTTGACTAGATCTAGAGACTAGATGAGTTCGTCTGGTGACTGTGTTCTATCAGTGACCTTGTGAGACTACGACATCTAGGAAATACTGTCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGA]
[+] EMBL BM616527 [ ccgAGTGCATCAGCAATTATCAGTACGCACAGTGACAAGTTAACACCTCGCATAAAGCGGTGTGTGTTACCCAAAGTGGCACTCGTTTTCGAAAAGAAGTGAAAAACTCCCAACGCGGAACCTTCTCCACTTGTACCGCAACAACTCTTGACTAGATCTAGAGACTAGATGAGTTCGTCTGGTGACTGTGTTCTATCAGTGACCTTGTGAGACTACGACATCTAGGAAATACTGTCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTG ]
[+] EMBL BX606616 [ ACAAGTTAACACCTCGCATAAAGCGGTGTGTGTTACCCAAAGTGGCACTCGTTTTCGAAAAGAAGTGAAAAACTCCCAACGCGGAACCTTCTCCACTTGTACCGCAACAACTCTTGACTAGATCTAGAGACTAGATGAGTTCGTCTGGTGACTGTGTTCTATCAGTGACCTTGTGAGACTACGACATCTAGGAAATACTGTCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTGCGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCT ]
consensusID : consensus_8723#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 637 fasta sequence
[AATCACCCAGGTTAACCAGAAAGTTATTACGAATGNCTTCATCNGTCTGGTCAGCGCCTGGTATGTGANANAGCTTCNAGGAAGTGCTGGGCTTCGAAAAANGGATCCTACCGNAAAGACAANCTAGAGAAATTTCTGGAATATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAACTTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACATGAGCTCTCGATTCAGGTACTTANCTNGGATCGTAATGTACATGTCCCGTATCAGTATAACGAATGCTCATCAATCAGCACACTATACTGTGCNGGTTGATATACCGTCAGACAGGACGCGATATNCGGGCAGCATAGATCCTCTATGTGATNCCAGGACCTGGTACGAACGGGATGCTNNCCGAAACATGGACGTNCCGGACTGTGAGTACAATATATATCTNTGCAAGTTACCATGAAACTACGCAATCTAANTTAGACGCCATAAACTGCACGCATCGANAACAGGGGAAAAGCNCACNANACACAATCGCTGTTAATNGTAACCANCGGNTCATGGTATCCACCATTGCTGGATCGGAGNGTCATTTCAAGANAACACCACAGT]
[+] EMBL AL932220 [AATCACCCAGGTTAACCAGAAAGTTATTACGAATGNCTTCATCNGTCTGGTCAGCGCCTGGTATGTGANANAGCTTCNAGGAAGTGCTGGGCTTCGAAAAANGGATCCTACCGNAAAGACAANCTAGAGAAATTTCTGGAATATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAACTTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACATGAGCTCTCGATTCAGGTACTTANCTNGGATCGTAATGTACATGTCCCGTATCAGTATAACGAATGCTCATCAATCAGCACACTATACTGTGCNGGTTGATATACCGTCAGACAGGACGCGATATNCGGGCAGCATAGATCCTCTATGTGATNCCAGGACCTGGTACGAACGGGATGCTNNCCGAAACATGGACGTNCCGGACTGTGAGTACAATATATATCTNTGCAAGTTACCATGAAACTACGCAATCTAANTTAGACGCCATAAACTGCACGCATCGANAACAGGGGAAAAGCNCACNANACACAATCGCTGTTAATNGTAACCANCGGNTCATGGTATCCACCATTGCTGGATCGGAGNGTCATTTCAAGANAACACCACAGT]
consensusID : consensus_8723#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 625 fasta sequence
[CCGCCCACGCGTCCGGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACATGTCCCGTATCAGTATAAGAATGCTCATCAATCAGCACACTATACTGTTTGGTGATATACCGCAGACAGGACGCCATATCGGTAGCATAGATCCTCTATGTGATCCGCACATGGTCGTACGGGATGCTTACGAAAATGCACGTTTTCTATGT]
[+] EMBL BM575068 [CCGCCCACGCGTCCGGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACATGTCCCGTATCAGTATAAGAATGCTCATCAATCAGCACACTATACTGTTTGGTGATATACCGCAGACAGGACGCCATATCGGTAGCATAGATCCTCTATGTGATCCGCACATGGTCGTACGGGATGCTTACGAAAATGCACGTTTTCTATGT]
consensusID : consensus_8723#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 584 fasta sequence
[CCGCGGACGCGTGGGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCCTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACATGTCCCGTATCAGTATAAGAATGCTCATCAATCAACACACTATACTGTTTGGTGATATACCACAGACAGGACGCCATATCGGTAGCATAGATCCTCTATGTGATCCGCACATGGTCGTACGG]
[+] EMBL BM589788 [CCGCGGACGCGTGGGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCCTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACATGTCCCGTATCAGTATAAGAATGCTCATCAATCAACACACTATACTGTTTGGTGATATACCACAGACAGGACGCCATATCGGTAGCATAGATCCTCTATGTGATCCGCACATGGTCGTACGG]
consensusID : consensus_8723#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 472 fasta sequence
[AAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCATTTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCTGAGACGTTTGCCTTGTGTGTGTCTCTGTTGTTGTGTCTTGACCACTGAAAGTCTCTAATCGATGATTTTATGGAAACTACAATGTGTCTATAGAGATGCAAACGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGATGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCCTCAGACGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACCA]
[+] EMBL BM618121 [AAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCATTTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCTGAGACGTTTGCCTTGTGTGTGTCTCTGTTGTTGTGTCTTGACCACTGAAAGTCTCTAATCGATGATTTTATGGAAACTACAATGTGTCTATAGAGATGCAAACGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGATGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCCTCAGACGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8723#1 CCGAAATCAGTAAACATTGAATCAGTTACCACAATATCGAAAGAAAAATAAATACATATC 60
consensus_8723#2 -------------------------------------CCGCGGACGCGTGGG-ACATATC 22
consensus_8723#6 ------------------------------------------------------------
consensus_8723#5 ------------------------------------------------------------
consensus_8723#4 ------------------------------------------------------------
consensus_8723#0 ------------------------------------------------------------
consensus_8723#3 ---------------------------------------AATCACCCAGGTTAACCAGAA 21
consensus_8723#1 GAGCAGTGCATCAGCAATTATCAGTACGCACAGTGACAAGT---TAACACCTCGCATAAA 117
consensus_8723#2 GAGCAGTGCATCAGCAATTATCAGTACGCACAGTGACAAGT---TAACACCTCGCATAAA 79
consensus_8723#6 ------------------------------------------------------------
consensus_8723#5 ------------------------------------------------------------
consensus_8723#4 ------------------------------------------------------------
consensus_8723#0 ------------------------------------------------------------
consensus_8723#3 AGTTATTACGAATGNCTTCATCNGTCTGGTCAGCGCCTGGTATGTGANANAGCTTCNAGG 81
consensus_8723#1 GCGGTGTGTGTTACCCAAAGTGGCACTCGTTTTCGAAAAGAAGTGAAAAACTCCCAACGC 177
consensus_8723#2 GCGGTGTGTGTTACCCAAAGTGGCACTCGTTTTCGAAAAGAAGTGAAAAACTCCCAACGC 139
consensus_8723#6 --------------------------------------------------------AAAT 4
consensus_8723#5 ------------------------------------------------------------
consensus_8723#4 ------------------------------------------------------------
consensus_8723#0 ------------------------------------------------------------
consensus_8723#3 AAGTGCTGGGCTTCGAAAAANGGATCCTACCGNAAAGACAANCTAGAGAAATTTCTGGAA 141
consensus_8723#1 GGAACCTTCTCTACTTGTACCGCAACAACTCTTGACTAGATCTAGAGACTAGATGAGTTC 237
consensus_8723#2 GGAACCTTCTCCACTTGTACCGCAACAACTCTTGACTAGATCTAGAGACTAGATGAGTTC 199
consensus_8723#6 GAAGCTGTTTCC---CGTGCGGC---------TGTCCAACATCAATAAGATGTTGGATTT 52
consensus_8723#5 ------------------------------------------------------------
consensus_8723#4 ------------------------------------------------------------
consensus_8723#0 ---------------------------------------------------CAAGAATCG 9
consensus_8723#3 TATCGCTCACCCAGATTCGTGACCGCCACTC-CGATGTTGTGCAAACAATGGCTCAAGGG 200
consensus_8723#1 GTCTGGTGACTGTGTTCTATCAGTGACCTTGTGAGACTACGACATCTA--GGAAATACTG 295
consensus_8723#2 GTCTGGTGACTGTGTTCTATCAGTGACCTTGTGAGACTACGACATCTA--GGAAATACTG 257
consensus_8723#6 TTACTCCCATTTTAATCCATCA----CCCCTGAGCATTAAGCAATTTA--TCGACTTCTG 106
consensus_8723#5 ------------------------------------------------------------
consensus_8723#4 ------------------------------------------------------------
consensus_8723#0 GCACGAGG-----GTTCTATCAGTGACCTTGTGAGACTACGACATCTA--GGAAATACTG 62
consensus_8723#3 ATACTGGAACT-TGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACATGAGCTCTCG 259
consensus_8723#1 TCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTT 355
consensus_8723#2 TCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTT 317
consensus_8723#6 AGACGTTTGCCTTGTG-TGTGTCTC-TGTTGTTGTGTCTTGACCACTGAAAGTC----TC 160
consensus_8723#5 ----------CCGCGGACGCGTGGG-TGCGGCTGTCCAACATCAATAAGATGTTGGATTT 49
consensus_8723#4 CCGCCCACGCGTCCGGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTT 60
consensus_8723#0 TCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTT 122
consensus_8723#3 ATTCAGGTACTTANCTNGGATCGTAATGTACATGTCCCGTATCAGTATAACG-------- 311
* ** *** * * *
consensus_8723#1 TTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAA 415
consensus_8723#2 TTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAA 377
consensus_8723#6 TAATCGATGATTTTATGGAA-ACTACAATGTGTCTATAGAGATGCAAAC----GGCTTAA 215
consensus_8723#5 TTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAA 109
consensus_8723#4 TTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAA 120
consensus_8723#0 TTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAA 182
consensus_8723#3 --AATGCTCATCAATCAGCACACTATACTGTGCNGGTTGATATACCGTC---AGACAGGA 366
* ** ** * * * * * * *
consensus_8723#1 TGCATGTCCTCGAAAGTCGTTTGTTTTCCTT-CGCAAAGAGCTGCCCGTGCGGTTGGCGA 474
consensus_8723#2 TGCATGTCCTCGAAAGTCGTTTGTTTTCCTT-CGCAAAGAGCTGCCCGTACGGTTGGCGA 436
consensus_8723#6 TGCATGTCCTCGAAAGTCGTTTGTTTTCCTT-CGCAAAGAGCTGCCCGTACGGATGGCGA 274
consensus_8723#5 TGCATGTCCTCGAAAGTCGTTTGTTTTCCTT-CGCAAAGAGCTGCCCGTACGGTTGGCGA 168
consensus_8723#4 TGCATGTCCTCGAAAGTCGTTTGTTTTCCTT-CGCAAAGAGCTGCCCGTACGGTTGGCGA 179
consensus_8723#0 TGCATGTCCTCGAAAGTCGTTTGTTTTCCTT-CGCAAAGAGCTGCCCGTACGGTTGGCGA 241
consensus_8723#3 CGCG-ATATNCGGGCAGCATAGATCCTCTATGTGATNCCAGGACCTGGTACGAACGGGAT 425
** * ** * * * ** * * ** * ** ** **
consensus_8723#1 ATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTC 534
consensus_8723#2 ATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTC 496
consensus_8723#6 ATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCCTCAGACGGTC 334
consensus_8723#5 ATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCCTCAGTCGGTC 228
consensus_8723#4 ATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTC 239
consensus_8723#0 ATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTC 301
consensus_8723#3 GCTNNCCGAAACATGG-ACGTNCCGGACTGTGAGTACAATATATATCTNTGCAAGTTACC 484
**** * ** * * * * * *** * ** ** ** *
consensus_8723#1 TGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGAT- 593
consensus_8723#2 TGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGAT- 555
consensus_8723#6 TGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGAT- 393
consensus_8723#5 TGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGAT- 287
consensus_8723#4 TGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGAT- 298
consensus_8723#0 TGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGAT- 360
consensus_8723#3 ATGAAACTACGCAATCTAANTTAGACGCC-ATAAACTGCACGCATCGANAACAGGGGAAA 543
* * * * * * * * * ** *** **** ** * ***
consensus_8723#1 --CCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCC 651
consensus_8723#2 --CCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCC 613
consensus_8723#6 --CCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCC 451
consensus_8723#5 --CCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCC 345
consensus_8723#4 --CCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCC 356
consensus_8723#0 --CCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCC 418
consensus_8723#3 AGCNCACNANACACAATCGCTGTTAATNGTAACCANCGGNTCATGGTATCCACCATTGCT 603
* ** * ****** *** * * ** ** * * **
consensus_8723#1 ACTCCGA--TGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGA 709
consensus_8723#2 ACTCCGA--TGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGA 671
consensus_8723#6 ACTCCGA--TGTTGTGCAAACCA------------------------------------- 472
consensus_8723#5 ACTCCGA--TGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGA 403
consensus_8723#4 ACTCCGA--TGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGA 414
consensus_8723#0 ACTCCGA--TGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGA 476
consensus_8723#3 GGATCGGAGNGTCATTTCAAGANAACACCACAGT-------------------------- 637
** ** * **
consensus_8723#1 TGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACAT 769
consensus_8723#2 TGGAGCGATTGAGCCATCCACTGA------------------------------------ 695
consensus_8723#6 ------------------------------------------------------------
consensus_8723#5 TGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACAT 463
consensus_8723#4 TGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACAT 474
consensus_8723#0 TGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACAT 536
consensus_8723#3 ------------------------------------------------------------
consensus_8723#1 GTCCCGTATCAGTATAAGAATGCTCATCAATCAGCACACTATACTGTTTGGTGATATACC 829
consensus_8723#2 ------------------------------------------------------------
consensus_8723#6 ------------------------------------------------------------
consensus_8723#5 GTCCCGTATCAGTATAAGAATGCTCATCAATCAACACACTATACTGTTTGGTGATATACC 523
consensus_8723#4 GTCCCGTATCAGTATAAGAATGCTCATCAATCAGCACACTATACTGTTTGGTGATATACC 534
consensus_8723#0 GTCCCGTATCAGTATAAGAATGCTCATCAATCAGCACACTATACTGTTTGGTGATATACC 596
consensus_8723#3 ------------------------------------------------------------
consensus_8723#1 GCAGACAGGACGCCATATCGGTAGCATAGATCCTC------------------------- 864
consensus_8723#2 ------------------------------------------------------------
consensus_8723#6 ------------------------------------------------------------
consensus_8723#5 ACAGACAGGACGCCATATCGGTAGCATAGATCCTCTATGTGATCCGCACATGGTCGTACG 583
consensus_8723#4 GCAGACAGGACGCCATATCGGTAGCATAGATCCTCTATGTGATCCGCACATGGTCGTACG 594
consensus_8723#0 G-AGACAGGACGCCATATCGGTAGCATAGATCCTCTATGTGATCCGCACATGGGTCCGTA 655
consensus_8723#3 ------------------------------------------------------------
consensus_8723#1 ------------------------------------------------------------
consensus_8723#2 ------------------------------------------------------------
consensus_8723#6 ------------------------------------------------------------
consensus_8723#5 G----------------------------------------------------------- 584
consensus_8723#4 GGATGCTTACGAAAATGCACGTTTTCTATGT----------------------------- 625
consensus_8723#0 CGGGATGCTTACGAAAATGCACGTGTGTCTATGTGATCAANATTATCTTGCAAGTCCAGA 715
consensus_8723#3 ------------------------------------------------------------
consensus_8723#1 ------------------------------------------------------------
consensus_8723#2 ------------------------------------------------------------
consensus_8723#6 ------------------------------------------------------------
consensus_8723#5 ------------------------------------------------------------
consensus_8723#4 ------------------------------------------------------------
consensus_8723#0 AACTCGAAGTTAACTAGAAGCATAATGGCAGGCATTTGATAAGGGGAAAACCCCCATTAA 775
consensus_8723#3 ------------------------------------------------------------
consensus_8723#1 ------------------------------------------------------------
consensus_8723#2 ------------------------------------------------------------
consensus_8723#6 ------------------------------------------------------------
consensus_8723#5 ------------------------------------------------------------
consensus_8723#4 ------------------------------------------------------------
consensus_8723#0 AAACTGGGTGTATGTTAGCCAATCCGCAATCCTGGTTTCNCACCATGGCGNGGTTCTCGC 835
consensus_8723#3 ------------------------------------------------------------
consensus_8723#1 ------------------------------------------------------------
consensus_8723#2 ------------------------------------------------------------
consensus_8723#6 ------------------------------------------------------------
consensus_8723#5 ------------------------------------------------------------
consensus_8723#4 ------------------------------------------------------------
consensus_8723#0 AGGCTATATTGCGAGGACACNCCAAGNTGCGTNGGCCTTCGTAATNGGAGCCTTCACTGG 895
consensus_8723#3 ------------------------------------------------------------
consensus_8723#1 ----------------------------------
consensus_8723#2 ----------------------------------
consensus_8723#6 ----------------------------------
consensus_8723#5 ----------------------------------
consensus_8723#4 ----------------------------------
consensus_8723#0 GAACCAGGANAACAGGGATTGTTGGGCCTCCCAG 929
consensus_8723#3 ----------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||