These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8730#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2162 fasta sequence [CCGCGCGTGGTGATTGCCGTCATTCCGGACGCACCGGATGCGCCGGATGCGGTGGCCGTGAGCGACACGGAGGTGCTGCTGCGCTGGAAGCAACCGCGCAGCGACGGCAACTCGCAGGTGATCTGCTACAGCCTGGAGCAGAAGGAGCACGGCAAGGCGGACTGGGTCGACGTGGCGAGCAACATCGATCACGAGTTCTTCCTGGTGCACGATTTGCGCCCGACCGTGGGCTACCAGTTCCGGCTGGCGGCGTACAATCGTATCGGCTGGAGCGACCGCGGTCTGCCGACCAAGACGATCACGACGCTCGAGCCGGGTGCGCCCAAGATTCAGATTACGCGCGCGATGAAGCATCTGCAGCAGCTGACGGAGTCGGGCCAGCAGGTAGGACCGGAGGAGCGCACGGGCCGGCTGGACTACAGCTACGAGAAGACGCCGCTCAAGTGGAGCATCGAGGGCAACTACAACGAGAAGTACACGTTCATGTCGGAGATGGCGCGCGGCCGGTACTCGATCGTGGTGAAGGGACTGGAGAAGGCGACGGACAAGATTGTGGTGGCGAAGATCTTCGAGCTGGGCGACGAGCGGTCGGCCGAGGCGGTGGAGCG-GGAGTTCCATGTGCTACGCACGCTGCGCCACGAGCGCATTGGGGCGCTGCTCGCTGCGTTCCGGCCGAAAAACACGTCGATTGCGGCGCTGGTGATGGAGAAGCTGCAGGGCGCCGATGTGCTGACGTACCTGAGCAGCCGCTCGGAGTACAGTGAGCAGATAGTGGCGACGATCGTGAACCAGGTGCTGGATGGGTTGCAGTACCTGCACTGGCGCGGCATCTGCCATCTGGACCTGCAGCCGGACAACATCGTGATGGCGTCGGTGCGCCAGGTCAACATCAAGCTGGTGGACTTCGGATCGGCTCAGTACGTGTCGAAGCTCGGCACGAATGTTACACGCTCGGGCTGGTTGGACTTTATGCCACCGGAGGTCCTGAACGATGAGCCGGCGCTGCCACAGACCGACATCTGGACGGTCGGCTGCCTGACGTACCTGTTCCTGTCCGCCACCAGCCCGTTCCGTGGCCAGGATGAGGCGGAAACGCGTGCCAACATTAGCTTCGTGCGCTATCGCTTCGAGAACCTGTTCAAGGAGGTCACCGCGGAAGCAACGCGCTTCCTGATGCTCATCTTCAAGCGTGCACCAAACAAACGTCCAACGGTCGAGGAGTGCTTCGATCACCGCTGGTTGGTGCACACCGACTTCATGACGAAGAAGCGCGAGAGGGCGATCTTCCCTGGCAACCGTTTGAAGCAAATTTCCGAAGAATACCATACGATGAAAACGAACGAAGCCACCAAGTCGGAGACGATCTCCAACTTTGGTGGCCAATCCCCGCGCCAGCTGTTGCGTTCCAACAGCATCCAGGAGGAGCTGCTGACCACCTTCTAAAAAAAAAAAACACAATCGCGGCTTTATGCTTTTCTCGCTCCCTATCGCGTGTTTCAATATTCCGTTTTCAGCGTTAGTTATTTGCTTTGTTTTTGCTTCTTCTAGTAGAAAATGTGGCTCATGTTTTCCCCTCTGTTGCTATTTCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCGCCTTTATCATTGGGCGTTCTTTACCGCTCGCTGGTGTCGAATTTATTAAACCCCATTGAAAAGACCCGAGAAAGAGCTTTATTGGGCGTTTCTTTTCCTTTTTGGTTTCGTTTGTTCAAAGAAGCTTTCGAGCTGTCTAGTTTCGGATTTGCTTATCCCATTTTCTGTCCGCTAGCAAT-GGAAAAGAGTTCTTATAT-AACGAAGATCAAACGATTTGAAGTAGTAAAGAAAAGTGAGAG--AAAAAACATTAGAAAAAAGGGTTTTTACACTTAAACCAAC-AAAAAAAACAATGAAACGAGTAAACACAA-TCATGTTCTTTCTATACAATCGTACGTTTATACAAACACGCGCAGCTCACATACACATTTAGCCGGTATGTGGTGCTGCCTGTTTGGAGTTGTTCGGGAGAGCCGCTTATTTAAAAAAAATGGGATTTTGGACCACGCAATCCCCCGGGGGATCTTTTTTTATATGACTTTTTTAACCGCAAACCACCACTGTTATACACACATCCCTAAGAAAAACCGGGGCTTTGTGCT] [+] EMBL BM598294 [CCGCGCGTGGTGATTGCCGTCATTCCGGACGCACCGGATGCGCCGGATGCGGTGGCCGTGAGCGACACGGAGGTGCTGCTGCGCTGGAAGCAACCGCGCAGCGACGGCAACTCGCAGGTGATCTGCTACAGCCTGGAGCAGAAGGAGCACGGCAAGGCGGACTGGGTCGACGTGGCGAGCAACATCGATCACGAGTTCTTCCTGGTGCACGATTTGCGCCCGACCGTGGGCTACCAGTTCCGGCTGGCGGCGTACAATCGTATCGGCTGGAGCGACCGCGGTCTGCCGACCAAGACGATCACGACGCTCGAGCCGGGTGCGCCCAAGATTCAGATTACGCGCGCGATGAAGCATCTGCAGCAGCTGACGGAGTCGGGCCAGCAGGTAGGACCGGAGGAGCGCACGGGCCGGCTGGACTACAGCTACGAGAAGACGCCGCTCAAGTGGAGCATCGAGGGCAACTACAACGAGAAGTACACGTTCATGTCGGAGATGGCGCGCGGCCGGTACTCGATCGTGGTGAAGGGACTGGAGAAGGCGACGGACAAGATTGTGGTGGCGAAGATCTTCGAGCTGGGCGACGAGCGGTCGGCCGAGGCGGTGGAGCGTGGAGTTCCATGTGCTACGCACGC ] [+] EMBL BM621362 [ ccgTACAGCTACGAGAAGACGCCGCTCAAGTGGAGCATCGAGGGCAACTACAACGAGAAGTACACGTTCATGTCGGAGATGGCGCGCGGCCGGTACTCGATCGTGGTGAAGGGACTGGAGAAGGCGACGGACAAGATTGTGGTGGCGAAGATCTTCGAGCTGGGCGACGAGCGGTCGGCCGAGGCGGTGGAGCG GGAGTTCGATGTGCTGCGCACGCTGCGCCACGAGCGCATTGGGGCGCTGCTCGCTGCGTTCCGGCCGAAAAACACGTCGATTGCGGCGCTGGTGATGGAGAAGCTGCAGGGCGCCGATGTGCTGACGTACCTGAGCAGCCGCTCGGAGTACAGTGAGCAGATAGTGGCGACGATCGTGAACCAGGTGCTGGATGGGTTGCAGTACCTGCACTGGCGCGGCATCTGCCATCTGGACCTGCAGCCGGACAACATCGTGATGGCGTCGGTGCGCCAGGTCAACATCAAGCTGGTGGACTTCGGATCGGCTCAGTACGTGTCGAAGCTCGGCACGAATGTTACACGCTCGGGCTGGTTGGACTTTATGCCACCGGAGGTCCTGA ] [+] EMBL BM620629 [ ccgGCTGCTCGCTGCGTTCCGGCCGAAGAACACGTCGATTGCGGCGCTGGTGATGGAGAAGCTGCAGGGCGCCGATGTGCTGACGTACCTGAGCAGCCGCTCGGAGTACAGTGAGCAGATAGTGGCGACGATCGTGAACCAGGTGCTGGATGGGTTGCAGTACCTGCACTGGCGCGGCATCTGCCATCTGGACCTGCAGCCGGACAACATCGTGATGGCGTCGGTGCGCCAGGTCAACATCAAGCTGGTGGACTTCGGATCAGCCCAGTACGTGTCGAAGCTCGGCACGAATGTTACCCGCTCGGGCTGGCTGGACTTTATGCCACCGGAGGTCCTGAACGATGAGCCGGCGCTGCCACAGACCGACATCTGGACGGTCGGCTGCCTGACGTACCTGTTCCTGTCCGCCACCAGCCCGTTCCGTGGCCAGGATGAGGCGGAAACGCGTGCCAACATTAGCTTCGTGCGCTATCGCTTCGAGAACCTGTTCAAGGAGGTCACCGCGGAAGCAACGCGCTTCCTGATGCTCATCTTCAAGCGTGCACCAAACAAACGTCCAACGGTCGAGGAGTGCTTCGATCACCGCTGGTTGGTGCACACCGACTTCATGACGAAGAAGCGCGAGAGGGCGATCTTCCCTGGCAACCGTTTGAAGCAAATTTCCGAAGAATACCATACGATGAA ] [+] EMBL BM626018 [ ccGGTCACCGCGGAAGCAACGCGCTTCCTGATGCTCATCTTCAAGCGTGCACCAAACAAACGTCCAACGGTCGAGGAGTGCTTCGATCACCGCTGGCTGGTGCACACCGACTTCATGACGAAGAAGCGCGAGAGGGCGATCTTCCCTGGCAACCGTTTGAAGCAAATTTCCGAAGAATACCATACGATGAAAACGAACGAAGCCACCAAGTCGGAGACGATCTCCAACTTTGGTGGCCAATCCCCGCGCCAGCTGTTGCGTTCCAACAGCATCCAGGAGGAGCTGCTGACCACCTTCTAAAAAAAAAAAACACAATCGCGGCTTTATGCTTTTCTCGCTCCCTATCGCGTGTTTCAATATTCCGTTTTCAGCGTTAGTTATTTGCTTTGTTTTTGCTTCTTCTAGTAGAAAATGTGGCTCATGTTTTCCCCTCTGTTGCTATTTCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCGCCTTTATCATTGGGCGTTCTTTACCGCTCGCTGGTGTCGAATTTATTAAACCCCATTGAAAAGACCCGAGAAAGAGCTTTATTGGGCGTTTCTTTTCCTTTTTGGTTTCGTTTGTTCAAAGAAGCTTTCGAGCTGTCTAGTTTCGGATTTGCTTATCCCATTTTCTGTCCGCTAGCAATGGGAAAAGAGTTCTTATAT AACGAA ] [+] EMBL BX621579 [ ATGCTTTTCTCGCTCCCTATCGCGTGTTTCAATATTCCGTTTTCAGCGTTAGTTATTTGCTTTGTTTTTGCTTCTTCTAGTAGAAAATGTGGCTCATGTTTTCCCCTCTGTTGCTATTTCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCGCCTTTATCATTGGGCGTTCTTTACCGCTCGCTGGTGTCGAATTTATTAAACCCCATTGAAAAGACCCGAGAAAGAGCTTTATTGGGCGTTTCTTTTCCTTTTTGGTTTCGTTTGTTCAAAGAAGCTTTCGAGCTGTCTAGTTTCGGATTTGCTTATCCCATTTTCTGTCCGCTAGCAAT GGAAAAGAGTTCTTATATAAACGAAGATCAAACGATTTGAAGTAGTAAAGAAAAGTGAGAG AAAAAACATTAGAAAAAAGGGTTTTTACACTTAAACCAAC AAAAAAAACAATGAAACGAGTAAACACAA TCATGTTCTTTCTATACAATCGTACGTTTATACAAACACGCGCAGCTCACATACACATTTAGCCGGTATGTGGTGCTGCCTGTTTGGAGTTGTTCGGGAG ] [+] EMBL BM650115 [ ccgCCGTTTTCAGCGTTAGTTATTTGCTTTGTTTTTGCTTCTTCTAGTAGAAAATGTGGCTCATGTTTTCCCCTCTGTTGCTATTTCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCGCCTTTATCATTGGGCGTTCTTTACCGCTCGCTGGTGTCGAATTTATTAAACCCCACTGAAAAGACCCGAGAAAGTGCTTTATTGGGCGTTTCTTTTCCTTTTTGGTTTCGTTTGTTCAGAGTAGCTTTCGATCTGTCGAGTTTCGGCTTTGCTTATCCCATTTTCTGTCCGCTAGCACT GGAAAAGAGTACTTATATAAACGAAGATCAAACGATTTAAAGAAGTAAAGAAAAGAGAGAGAAAAAAAACATTAGAAAAAAGGGTTTTTACACTTAAACCAACAAAAAAAAACAATGAAACGAGTAAACACAATTCTTGTTCTTTCTATACAATCGTACGTTTATACAAACACGCGCAGCACACATACACATTTAGCCGGTATGTGGTGCTGCCTGTTTGGAGTTGTTCGGGAGAGCCGCTTATTTAAAAAAAATGGGATTTTGGACCACGCAATCCCCCGGGGGATCTTTTTTTATATGACTTTTTTAACCGCAAACCACCACTGTTATACACACATCCCTAAGAAAAACCGGGGCTTTGTGCT] consensusID : consensus_8730#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 736 fasta sequence [ACCAATNCCCCCCCACGTTAATAACACAATCATGTCCTTTCTATACATCGTACCTTTATACANACACACCCGCAGCTCACATACACATTTACCGGCTATGTGGTGCTGCCTGTTTGCACTTGTTCGGAAGCCGCTTATTTAAAAAAAAATGGGATTTTGGACCACGCAATCCCCCGGGGGATCTTTTTNTATATGACTTTTTTAACCGCAAACCACCACTGTTATACACACATCCCTAAGAAAAACCGGGGCTTTGTGCTGGTCCGCCCGCCGCTGCAGCGTGTTGCTTTAGCTTTAGTTATTTAGGGAAACTGTTAGCAAACAAAAAAAAAAGAATAGAAAAGAAAGAGAAAAAATCTGCCGTTTGTGTACTCCCTTCACCGGCAGGGGGTGGATGTGGTGCGGGTTTCCGGGTTTTGAGCCGTGAAACGCACCACAATTTTCCACCATCGAAGGAAACAAACAATCTAAAAAA-CATAGGGAGGAATACAGAGTGTAACTTATTTATTTGTATATTGTATATTTACTCTATTACGCTATTGCTTTAGTNGATACACAAAGTGCTACACTTTTTGCTGCTTCATTTGCGACTCGCGATCATTATAGTGTGGTCAGGGTATCGACAGGAGCGGAGGGGTTTTCTTTTTATTCATTCACTTCAGCCAATTTATTAGGAGAAGGTAATCTGACCGGTAAAGTGTAACTGGATGTTGGATAAATAAAATTGTTTTTACGT] [+] EMBL AL934525 [ACCAATNCCCCCCCACGTTAATAACACAATCATGTCCTTTCTATACATCGTACCTTTATACANACACACCCGCAGCTCACATACACATTTACCGGCTATGTGGTGCTGCCTGTTTGCACTTGTTCGGAAGCCGCTTATTTAAAAAAAAATGGGATTTTGGACCACGCAATCCCCCGGGGGATCTTTTTNTATATGACTTTTTTAACCGCAAACCACCACTGTTATACACACATCCCTAAGAAAAACCGGGGCTTTGTGCTGGTCCGCCCGCCGCTGCAGCGTGTTGCTTTAGCTTTAGTTATTTAGGGAAACTGTTAGCAAACAAAAAAAAAAGAATAGAAAAGAAAGAGAAAAAATCTGCCGTTTGTGTACTCCCTTCACCGGCAGGGGGTGGATGTGGTGCGGGTTTCCGGGTTTTGAGCCGTGAAACGCACCACAATTTTCCACCATCGAAGGAAACAAACAATCTAAAAAA CATAGGGAGGAATACAGAGTGTAACTTATTTATTTGTATATTGTATATTTACTCTATTACGCTATTGCTTTAGTNGATACACAAAGTGCTACACTTTTTGCTGCTTCATTTGCGACTCGCGATCATTATAGTGTGGTCAGGGTATCGACA ] [+] EMBL BX614809 [ GGTTTCCGGGTTTTGAGCCGTGAAACGTACCACAATTTTCCACTATCGAA CAAACAAACAAACTAAAAAAGAATAGGGAGGAATACAGAGTGTAACTTATTTATGTGTATATTGTATATTTACTCTATTACG TATTGCTTTAGT GATACACAAAGTGCTACA TTTTGCTGCTTCATTTGCGACTCGCGATCATTATAGGGTGGTCAGGGTATCGAAGGGAGCGGAGGGGTTTTCTTTTTATTCATTCACTTCAGCCAATTTATTAGGAGAAGGTAATCTGACCGGTAAAGTGTAACTGGATGTTGGATAAATAAAATTGTTTTTACGT] consensusID : consensus_8730#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 659 fasta sequence [CAGAATACCCCGCGTTATCTGTTGCTATTTCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCACCTTATATCATATGGGCGTACTTANACCGCTACGCTGGTGTCGAATTTATTAAACCCCATTGAAAAGACCCGAGAAAGCGCTTTATTAGGGCGTATCTATATTCCTATATTTAGGTATTCGTATTGTATACAAAGAAGCTATTCGAGCTAGTCGAGTAATACGGGCTATANGCTATATACCCATGTTACTAGTACCTGCTAGCAACTTGGCAAAAAGAGGTACCTTAATATAAAAACCGAAAGGAATCAACAACGGAAATCNACANAGGACACGTAACCACGGCAACGGAAGGNCGAGGAGACACAANANNACACCATCTCAACGGACACCATNACACACACAATTGGGGTATGANNATAACGAACCAACACAAAACACCACAACCAACAGCCAAACACACACGNAAAGCCANNNTCTGGANAAAANCGGAAGGTTAACCACAGCCAACCAAAAANCNNAAAATNGGGTTCACCTCCTACCACCTTAATTACTCACAACTCTCCGGGTTCAACGGTTANATTATAAACCCAAACAGCACACAGCCGGACCAACACGCTNCCAGACCACTTAACCNNCACCAATTTCTCACAGG] [+] EMBL AL692175 [CAGAATACCCCGCGTTATCTGTTGCTATTTCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCACCTTATATCATATGGGCGTACTTANACCGCTACGCTGGTGTCGAATTTATTAAACCCCATTGAAAAGACCCGAGAAAGCGCTTTATTAGGGCGTATCTATATTCCTATATTTAGGTATTCGTATTGTATACAAAGAAGCTATTCGAGCTAGTCGAGTAATACGGGCTATANGCTATATACCCATGTTACTAGTACCTGCTAGCAACTTGGCAAAAAGAGGTACCTTAATATAAAAACCGAAAGGAATCAACAACGGAAATCNACANAGGACACGTAACCACGGCAACGGAAGGNCGAGGAGACACAANANNACACCATCTCAACGGACACCATNACACACACAATTGGGGTATGANNATAACGAACCAACACAAAACACCACAACCAACAGCCAAACACACACGNAAAGCCANNNTCTGGANAAAANCGGAAGGTTAACCACAGCCAACCAAAAANCNNAAAATNGGGTTCACCTCCTACCACCTTAATTACTCACAACTCTCCGGGTTCAACGGTTANATTATAAACCCAAACAGCACACAGCCGGACCAACACGCTNCCAGACCACTTAACCNNCACCAATTTCTCACAGG] consensusID : consensus_8730#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 630 fasta sequence [CCGCGGACGCGTGGGTTTCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCGCCTTTATCATTGGGCGTTCTTTACCGCTCGCTGGTGTCGAATTTATTAAACCCCATTGAAAAGACCCGAGAAAGAGCTTTATTGGGCGTTTCTTTTCCTTTTTGGTTTCGTTTGTTCAGAGTAGCTTTCGAGCTGTCGAGTTTCGGCTTTGCTTATCCCATGTTCTGTCCGCTAGCACTGGAAAAGAGTACTTATATAAACGAAGATCAAACGATTTAAAGAAGTAAAGAAAAGAGAGAGAAAAAAAACATTAGAAAAAAGGGTTTTTACACTTAAACCAACAAAAAAAAACAATGAAACGAGTAAACACAATCATGTTCTTTCTATACAATCGTACGTTTATACAAACACGCGCAGCTCACATACACATTTAGCCGGTATGTGGTGCAGCCTGTTTGGAGTTGTTCGGGAGAGCCGCTTATTAAAAAAAATGGGATTTTGGACCACGCAATCCCCCGGGGGATCTTTTTTTATATGACTTTTTTAACCGCAAACCACCACTGTTATACACACATCCCTAAGAAAAACCGGGGCTTTGTGCTGGTCCGCCCGCCGCTGCAGCGTGTTGCTTTAGTT] [+] EMBL BM656143 [CCGCGGACGCGTGGGTTTCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCGCCTTTATCATTGGGCGTTCTTTACCGCTCGCTGGTGTCGAATTTATTAAACCCCATTGAAAAGACCCGAGAAAGAGCTTTATTGGGCGTTTCTTTTCCTTTTTGGTTTCGTTTGTTCAGAGTAGCTTTCGAGCTGTCGAGTTTCGGCTTTGCTTATCCCATGTTCTGTCCGCTAGCACTGGAAAAGAGTACTTATATAAACGAAGATCAAACGATTTAAAGAAGTAAAGAAAAGAGAGAGAAAAAAAACATTAGAAAAAAGGGTTTTTACACTTAAACCAACAAAAAAAAACAATGAAACGAGTAAACACAATCATGTTCTTTCTATACAATCGTACGTTTATACAAACACGCGCAGCTCACATACACATTTAGCCGGTATGTGGTGCAGCCTGTTTGGAGTTGTTCGGGAGAGCCGCTTATTAAAAAAAATGGGATTTTGGACCACGCAATCCCCCGGGGGATCTTTTTTTATATGACTTTTTTAACCGCAAACCACCACTGTTATACACACATCCCTAAGAAAAACCGGGGCTTTGTGCTGGTCCGCCCGCCGCTGCAGCGTGTTGCTTTAGTT] consensusID : consensus_8730#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 390 fasta sequence [CAGGCAAGAATCGGCACGATGGAGTTGGCGCGGCCGGTACTCGATCGTGGTGAAGGGACTGGAGAAGGCGACGGACAAGATTGTGGTGGCGAAGATCTTCGAGCTGGGCGACGAGCGGTCGGCCGAGGCGGTGGAGCGGGAGTTCGATGTGCTGCGCACGCTGCGCCACGAGCGCATTGGGGCGCTGCTCGCTGCGTTCCGGCCGAAAAACACGTCGATTGCGGCGCTAGGTGATGGAGAAGCTGCAGGGGCGCCGATGTGCTGACGTACCTAGCAGCCGCTCGGAGTACAGTGAGCAGATAGTGGCGACGATGGTGAACCAGGTGCTGGATGGGTTGCAGTACCTGCACTGGCGCGGCGATCTGCCAATCTGGACCTGCCAGGCCGGAC] [+] EMBL BX468907 [CAGGCAAGAATCGGCACGATGGAGTTGGCGCGGCCGGTACTCGATCGTGGTGAAGGGACTGGAGAAGGCGACGGACAAGATTGTGGTGGCGAAGATCTTCGAGCTGGGCGACGAGCGGTCGGCCGAGGCGGTGGAGCGGGAGTTCGATGTGCTGCGCACGCTGCGCCACGAGCGCATTGGGGCGCTGCTCGCTGCGTTCCGGCCGAAAAACACGTCGATTGCGGCGCTAGGTGATGGAGAAGCTGCAGGGGCGCCGATGTGCTGACGTACCTAGCAGCCGCTCGGAGTACAGTGAGCAGATAGTGGCGACGATGGTGAACCAGGTGCTGGATGGGTTGCAGTACCTGCACTGGCGCGGCGATCTGCCAATCTGGACCTGCCAGGCCGGAC] consensusID : consensus_8730#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 376 fasta sequence [CCGAAAAAATCTGCCGTTTGTGTGTGTACTCCCTTCACCGGCAGGGGGTGGATGTGGTGCGGGTTTCCGAGTTTTGAGCCGTGAAACGCACCACATTTGTCCACCATCGAACAAACAAACTAAAAAAAAATAGGGAGGAATACAGAGTGTAACTTATTTATTTGTATATTGTATATTTACTCTATTACGTATTGCTTTAGTGATACACAAAGTGCTACATTTTGCTGCTTCATTTGCGACTCGCGATCATTATAGTGTGGTCAGGGTATCGAATGGAGCGGGGGGGTTTTCTTTTTATTCATTCACTTCAGCCAATTTATCAGTCATTAGGAGAAGGTAATCGGACCGGTAAAGTGTAACTGGACGTTGGATAAAT] [+] EMBL BM655571 [CCGAAAAAATCTGCCGTTTGTGTGTGTACTCCCTTCACCGGCAGGGGGTGGATGTGGTGCGGGTTTCCGAGTTTTGAGCCGTGAAACGCACCACATTTGTCCACCATCGAACAAACAAACTAAAAAAAAATAGGGAGGAATACAGAGTGTAACTTATTTATTTGTATATTGTATATTTACTCTATTACGTATTGCTTTAGTGATACACAAAGTGCTACATTTTGCTGCTTCATTTGCGACTCGCGATCATTATAGTGTGGTCAGGGTATCGAATGGAGCGGGGGGGTTTTCTTTTTATTCATTCACTTCAGCCAATTTATCAGTCATTAGGAGAAGGTAATCGGACCGGTAAAGTGTAACTGGACGTTGGATAAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8730#0 CCGCGCGTGGTGATTGCCGTCATTCCGGACGCACCGGATGCGCCGGATGCGGTGGCCGTG 60 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 AGCGACACGGAGGTGCTGCTGCGCTGGAAGCAACCGCGCAGCGACGGCAACTCGCAGGTG 120 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 ATCTGCTACAGCCTGGAGCAGAAGGAGCACGGCAAGGCGGACTGGGTCGACGTGGCGAGC 180 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 AACATCGATCACGAGTTCTTCCTGGTGCACGATTTGCGCCCGACCGTGGGCTACCAGTTC 240 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 --ACCAATNCCCCCCCACGTTAATAACACAATCATGTCCTTTCTATACATCGTACCTTTA 58 consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 CGGCTGGCGGCGTACAATCGTATCGGCTGGAGCGACCGCGGTCTGCCGACCAAGACGATC 300 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 TACANACACACCCGCAGCTCACATACACATTTACCGGCTATGTGGTGCTGCCTGTTTGCA 118 consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 ACGACGCTCGAGCCGGGTGCGCCCAAGATTCAGATTACGCGCGCGATGAAGCATCTGCAG 360 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 CTTGTTCGGAAGCCGCTTATTTAAAAAAAAATGGGATTTTGGACCACGCAATCCCCCGGG 178 consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 CAGCTGACGGAGTCGGGCCAGCAGGTAGGACCGGAGGAGCGCACGGGCCGGCTGGACTAC 420 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ---------------------------------CAGAATACCCCGCGTTATCTGTTGCTA 27 consensus_8730#3 ------------------------------------------CCGCGG-ACGCGTGG--G 15 consensus_8730#1 GGATCTTTTTNTATATGACTTTTTTAACCGCAAACCACCACTGTTATACACACATCCCTA 238 consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 AGCTACGAGAAGACGCCGCTCAAGTGGAGCATCGAGGGCAACTACAACGAGAAGTACACG 480 consensus_8730#4 -----------------------------------------------CAGGCAAGAATCG 13 consensus_8730#2 TTTCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCACCTTATATCATATGGGCGTAC 87 consensus_8730#3 TTTCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCGCCTT-TATCAT-TGGGCGTTC 73 consensus_8730#1 AGAAAAACCGGGGCTTTGTGCTGGTCCGCCCGCCGCTGCAGCGTGTTGCTTTAGCTTTAG 298 consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 TT-CATGTCGGAGATGGCGCGCGGCCGGTACTCGATCGTGGTGAAGGGACTGGAGAAGGC 539 consensus_8730#4 G--CACGATGGAGTTGGCGC--GGCCGGTACTCGATCGTGGTGAAGGGACTGGAGAAGGC 69 consensus_8730#2 TTANACCGCTACGCTGGTGTCGAATT--TATTAAACCCCATTGAAAAGACCCGAGAAAGC 145 consensus_8730#3 TT-TACCGCT-CGCTGGTGTCGAATT--TATTAAACCCCATTGAAAAGACCCGAGAAAGA 129 consensus_8730#1 TTATTTAGGGAAACTGTTAGCAAACAAAAAAAAAAGAATAGAAAAGAAAGAGAAAAAATC 358 consensus_8730#5 -------------------------------------------------CCGAAAAAATC 11 * ** consensus_8730#0 -GACGGACAAGATTGTGGTGGCG----------AAGATCTTCGAGCTGGGCGACGAGCGG 588 consensus_8730#4 -GACGGACAAGATTGTGGTGGCG----------AAGATCTTCGAGCTGGGCGACGAGCGG 118 consensus_8730#2 -GCTTTATTAGGGCGTATCTATATTCCTATATTTAGGTATTCGTATTGTATACAAAGAAG 204 consensus_8730#3 -GCTTTATT-GGGCGTTTCTTT--TCCT---TTTTGGT-TTCGTTT---GTTCAGAGTAG 178 consensus_8730#1 TGCCGTTTGTGT----ACTCCCT---------TCACCGGCAGGGGGTGGATGTGGTGCGG 405 consensus_8730#5 TGCCGTTTGTGTGTGTACTCCCT---------TCACCGGCAGGGGGTGGATGTGGTGCGG 62 * * * * * consensus_8730#0 TCGGCCGAGGCGGTGGAGCG---GGAGTTCCATGTG--CTACGCACGCTGCG-----CCA 638 consensus_8730#4 TCGGCCGAGGCGGTGGAGCG---GGAGTTCGATGTG--CTGCGCACGCTGCG-----CCA 168 consensus_8730#2 CTATTCGAGCTAGTCGAGTAATACGGGCTATANGCTATATACCCATGTTACTAGTACCTG 264 consensus_8730#3 CT-TTCGAGCT-GTCGAGT--TTCGGCTT---TGCT-TAT-CCCATGTTC----TGTCCG 225 consensus_8730#1 GTTTCCGGGTT--TTGAGCC--GTGAAACGCACCACAATTTTCCACCATCGA------AG 455 consensus_8730#5 GTTTCCGAGTT--TTGAGCC--GTGAAACGCACCACATTTGTCCACCATCGA------AC 112 ** * * *** * * ** * consensus_8730#0 CGAGCGCATTGG--GGCGCTGCTCGCTGCGTTCCGGCCGAAAAACACGTCGATTGCGGCG 696 consensus_8730#4 CGAGCGCATTGG--GGCGCTGCTCGCTGCGTTCCGGCCGAAAAACACGTCGATTGCGGCG 226 consensus_8730#2 CTAGCAACTTGGCAAAAAGAGGTACCTTAATATAAAAACCGAAAGGAATCAACAACGGAA 324 consensus_8730#3 CTAGCA--CTGGAAAAGAGTACTTATATAA-ACGAAGATCAAACGATTTAAAGAAGTAAA 282 consensus_8730#1 GAAACAAACAATCTAAAAAACATAGGGAGGAATACAGAGTGTAACTTATTTATTTGTATA 515 consensus_8730#5 -AAACAAACTA---AAAAAAAATAGGGAGGAATACAGAGTGTAACTTATTTATTTGTATA 168 * * * * * * consensus_8730#0 CT-GGTGATGGAGAAGCTGCAGGG-CGCCGATGTGCTGACGTACCTGAGCAGCCGCTCGG 754 consensus_8730#4 CTAGGTGATGGAGAAGCTGCAGGGGCGCCGATGTGCTGACGTACCT-AGCAGCCGCTCGG 285 consensus_8730#2 ATCNACANAGGACACGTAACCACGGCAACGGAAGGNCGA-GGAGACACAANANNACACC- 382 consensus_8730#3 GAAAAGAGAGAGAAAAAAAACATTAGAAAAAAGGGTTTTTACACTTAAACCAACAAAAA- 341 consensus_8730#1 TTGTATATT---TACTCTATTACGCTATTGCTTTAGTNG-ATACACAAAGTGCTACACTT 571 consensus_8730#5 TTGTATATT---TACTCTATTACG-TATTGCTTTAGTG--ATACACAAAGTGCTACA--T 220 * * consensus_8730#0 AGTACAG--TGAGCAGATAGTGGCGACGATCGTGAACCAGGTGCTGGATGGGTTGCAGTA 812 consensus_8730#4 AGTACAG--TGAGCAGATAGTGGCGACGATGGTGAACCAGGTGCTGGATGGGTTGCAGTA 343 consensus_8730#2 ATCTCAA--CGGACAC-CATNACACACACAATTGGGGTATGANNATAA-CGAAC-CAACA 437 consensus_8730#3 AAAACAA--TGAA-AC-GAGTAAACACAATCATGTTCTTTCTATACAATCGTAC-GTTTA 396 consensus_8730#1 TTTGCTGCTTCATTTGCGACTCGCGATCATTATAGTGTGGTCAGGGTATCGACAGGAGCG 631 consensus_8730#5 TTTGCTGCTTCATTTGCGACTCGCGATCATTATAGTGTGGTCAGGGTATCGAATGGAGCG 280 * * * * * * consensus_8730#0 CCTGCACTGGCGCGGC-ATCTGCCA-TCTGGACCTGC--AGC--CGGACAACATCGTGAT 866 consensus_8730#4 CCTGCACTGGCGCGGCGATCTGCCAATCTGGACCTGCCAGGC--CGGAC----------- 390 consensus_8730#2 CA-AAACAC-CACAACCAACAGCCA-AACACACACGNAAAGC--CANNNTCTGGANAAAA 492 consensus_8730#3 TACAAACACGCGCAGCTCACATACA-CATTTAGCCGGTATGTGGTGCAGCCTGTTTGGAG 455 consensus_8730#1 GAGGGGTTTTCTTTTTATTCATTCA--CTTCAGCCAATTTAT--------TAGGAGAAGG 681 consensus_8730#5 GGGGGGTTTTCTTTTTATTCATTCA--CTTCAGCCAATTTATC-AGTCATTAGGAGAAGG 337 * * ** * consensus_8730#0 GGCGTCGGTGCGCCAGGTCAACATCAAGCTGGTGGACTTCGGATCGGCTCAGTACGTGTC 926 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 NCGGAAGGTTAACCACAGCCAACCAAAAANCNNAAAATNGGGTTCACCTCCTACCAC--- 549 consensus_8730#3 TTGTTCGGGAGAGC-CGCTTATTAAAAAAAATGGGATTTTGGACCACGCAATCCCCCGGG 514 consensus_8730#1 TAATCTGACCGGTAAAGTGTAACTGGATGTTGGATAAATAAAATTGTTTTTACGT----- 736 consensus_8730#5 TAATCGGACCGGTAAAGTGTAACTGGACGTTGGATAAAT--------------------- 376 consensus_8730#0 GAAGCTCGGCACGAATGTTACACGCTCGGGCTGGTTGGACTTTATGCCACCGGAGGTCCT 986 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ---CTTAATTACTCACAACTCTCCGGGTTCAACGGTTANATTATAAACCCAAACAGCACA 606 consensus_8730#3 GGATCTTTTTTTATATGACTTTTTTAACCGCAAACCACCACTGTTA-TACACACATCCCT 573 consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 GAACGATGAGCCGGCGCTGCCACAGACCGACATCTGGACGGTCGGCTGCCTGACGTACCT 1046 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 CAGCCGGACCAACACGCTN--CCAGACCACTTAAC-CNNCACCAATTTCTCACAGG---- 659 consensus_8730#3 AAGAAAAACCGGGGCTTTGTGCTGGTCCGCCCGCCGCTGCAGCGTGTTGCTTTAGTT--- 630 consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 GTTCCTGTCCGCCACCAGCCCGTTCCGTGGCCAGGATGAGGCGGAAACGCGTGCCAACAT 1106 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 TAGCTTCGTGCGCTATCGCTTCGAGAACCTGTTCAAGGAGGTCACCGCGGAAGCAACGCG 1166 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 CTTCCTGATGCTCATCTTCAAGCGTGCACCAAACAAACGTCCAACGGTCGAGGAGTGCTT 1226 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 CGATCACCGCTGGTTGGTGCACACCGACTTCATGACGAAGAAGCGCGAGAGGGCGATCTT 1286 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 CCCTGGCAACCGTTTGAAGCAAATTTCCGAAGAATACCATACGATGAAAACGAACGAAGC 1346 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 CACCAAGTCGGAGACGATCTCCAACTTTGGTGGCCAATCCCCGCGCCAGCTGTTGCGTTC 1406 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 CAACAGCATCCAGGAGGAGCTGCTGACCACCTTCTAAAAAAAAAAAACACAATCGCGGCT 1466 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 TTATGCTTTTCTCGCTCCCTATCGCGTGTTTCAATATTCCGTTTTCAGCGTTAGTTATTT 1526 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 GCTTTGTTTTTGCTTCTTCTAGTAGAAAATGTGGCTCATGTTTTCCCCTCTGTTGCTATT 1586 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 TCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCGCCTTTATCATTGGGCGTTCTTTA 1646 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 CCGCTCGCTGGTGTCGAATTTATTAAACCCCATTGAAAAGACCCGAGAAAGAGCTTTATT 1706 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 GGGCGTTTCTTTTCCTTTTTGGTTTCGTTTGTTCAAAGAAGCTTTCGAGCTGTCTAGTTT 1766 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 CGGATTTGCTTATCCCATTTTCTGTCCGCTAGCAATGGAAAAGAGTTCTTATATAACGAA 1826 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 GATCAAACGATTTGAAGTAGTAAAGAAAAGTGAGAGAAAAAACATTAGAAAAAAGGGTTT 1886 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 TTACACTTAAACCAACAAAAAAAACAATGAAACGAGTAAACACAATCATGTTCTTTCTAT 1946 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 ACAATCGTACGTTTATACAAACACGCGCAGCTCACATACACATTTAGCCGGTATGTGGTG 2006 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 CTGCCTGTTTGGAGTTGTTCGGGAGAGCCGCTTATTTAAAAAAAATGGGATTTTGGACCA 2066 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 CGCAATCCCCCGGGGGATCTTTTTTTATATGACTTTTTTAACCGCAAACCACCACTGTTA 2126 consensus_8730#4 ------------------------------------------------------------ consensus_8730#2 ------------------------------------------------------------ consensus_8730#3 ------------------------------------------------------------ consensus_8730#1 ------------------------------------------------------------ consensus_8730#5 ------------------------------------------------------------ consensus_8730#0 TACACACATCCCTAAGAAAAACCGGGGCTTTGTGCT 2162 consensus_8730#4 ------------------------------------ consensus_8730#2 ------------------------------------ consensus_8730#3 ------------------------------------ consensus_8730#1 ------------------------------------ consensus_8730#5 ------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||