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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8740#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1397 fasta sequence
[TTTTTCACCCTCTTCTTCATATCGCCCGCAGCGATTCAGAAATCTTGTTGTACACAATTTATTTTAATCTTCGAACAATAATTAAGGTAACAAAGTTCATCAACAGGGGAGAGTAAGTAAG-GAACGTGCCATTCCTCTATAGCAACAGTAGGCTGTGTTGTCAGTGTGTCCACAACATCGTGCATCGAAGTGTCCTTTAAAAGGTCTTACTTTTCCATCGCTTTAATTTGCTCCAGACAGTAGCTTGCCTGTTGTACAGTCTCTTCGTGCTTGTGCTGCTTTCCGTAGCGCCAGGCAAAGGTGCAGAACTCGGACGCTTGCCGGAGCAGTCCCTGTTGCAGGTAAAGTAGCCCCAAGTTTGCCTTGTACACACCCGCTTCGGAGAGATCCGGGATTTGGGCGGCTAGTGCAATGGCCTCTTTGAGAAACCGTTCAGCCGAAGCGTAGTCTTCAAGGTTAGAGCATGCGACACTGAGATTTTCAGTATCGTCAGTCCCTCCTCCGTTAGCATGCCGTGTATCTCGGTGTACGCTTCGTACGCCTGCAGGAACGCTTGCTTCGCTTCCGCAAAGCGCTTACTCTCC-ATCA-G-CAGCTGCGCGTACCAGTTCTTAGTGATTCCCCACAGCTCCCGGATTTCCTTCCCGTTGTCATCGCCCAGCTGTTTCAGTTTCTCCTCCAGCTTGGCCAGCGTCCACTCGAACCCTTGCGCGGCCTTATCCAAATGCCCTTGCAGTTGCGCGAGATGCGCCACCTTTGAGCTGATGTGTAGCATTTTGATGTGATCCTCCAAAAATCCGTCCGAAAACAGGCGCTGCATAACGTTGACGAACAGTTTTTCGGCCTTGGCAAAATCCCCCACCTCCATCGCAAGGTTTACCATGATGTCGTAGATGTACGTGATGCCATCCTTGCTCTGCAGATCTTGCGCCATCTTGAGGGCGAGATGCAGCATCTGTTCCGCCTTCTGATACTCTTCCTTCTGTATCGATAGGATGGAGCGTTTGATAATGGTAATCAGCTGACTTTCGGGCGTGTTTTCATCGTCGGACTTTTTGCTAAACCACGATAGGAAAGAACTCGCAGCGATGAAGTGCAGTGGCCCGGCGGTACGTTG-TTGCGCCGATTGTAATCGTCCTTGCTGCTGCCGTTCTGGTGGA---GATGATTTGTTCCATTTGCCGGGATCGGGGCGTGATTCGTGAACGACGCGAGCGGTATCGTCAGGGGCGCTATTCGAGGATGATTGATGGAAATGAAAAA-CCGTGACGCAAGGGAGGATGCTGTTGCCGAGCGGAACATTTTCTTGCCCTCGATGCACCACCACAACAGTTGTTCACAAATACTGTACAGAGGAGAAGATTAGGAGAAGATTTTCTTCACCAGCTTAAAATGGTTTTATT]
[+] EMBL CNS08F9O [TTTTTCACCCTCTTCTTCATATCGCCCGCAGCGATTCTGAAATCTTGTTGTACACAATTTATTTTAATCTTCGAACAATAATTAAGGTAACAAAGTTCATCAACAGGGGAGAGTAAGTAAGTGAACGTGCCATTCCTCTATAGCAACAGTAGGCTGTGTTGTCAGTGTGTCCACAACATCGTGCATCGAAGTGTCCTTTAAAAGGTCTTACTTTTCCATCGCTTTAATTTGCTCCAGACAGTAGCTTGCCTGTTGTACAGTCTCTTCGTGCTTGTGCTGCTTTCCGTAGCGCCAGGCAAAGGTGCAGAACTCGGACGCTTGCCGGAGCAGTCCCTGTTGCAGGTAAAGTAGCCCCAAGTTTGCCTTGTACACACCCGCTTCGGAGAGATCCGGGATTTGGGCGGCTAGTGCAATGGCCTCTTTGAGAAACCGTTCAGCCGAAGCGTAGTCTTCAAGGTTAGAGCATGCGACACTGAGATTTTCAGTATCGTCAGTCCCTCCTCCGTTAGCATGCCGTGTATCTCGGTGTACGCTTCGTACGCCTGCAGGAACGCTTGCTTCGCTTCCGCAAAGCGCTTACTCTCC ATCA G CAGCTGCGCGTACCAGTTCTTAGTAACCCCCCACAGCTCCCGGATTTCCTTCCCGTTGTCATCGCCCAGCTGTTTCAGTTTCTCCTCCAGCTTGGCCAGCGTCCACTCGAACCCTTGCGCGGCCTTATCCAAATGCCCTTGCAGTTGCGCGAGAAGCGCCACCTTTGAGCTGATGTGTAGCATTTTGATGTGATCCTCCAAAAATCCGTCCGAAAACAGGCGCTGCATAACGTTGACGAACAGTTTTTCGGCCTTGGCAAAATCCCCCACCTCCATCGCAAGGTTTACCATGATGTCGTAGATGTACGTGATGCCATCCTTGCTCTGCAGATCTTGCGCCATCTTGAGGGCGAGAAGCAGCATCTGTTCCGCCTTCTGATACTCTTCCTTCTGTATCGATAGGATGGAGCG ]
[+] EMBL CNS08CZ6 [ CTTCATATCGCCCGCAGCGATTCAGAAATCTTGTTGTACACAATTTATTTTAATCTTCGAACAATAATTAAGGTAACAAAGTTCATCAACAGGGGAGAGTAAGTAAG GAACGTGCCATTCCTCTATAGCAACAGTAGGCTGTGTTGTCAGTGTGTCCACAACATCGTGCATCGAAGTGTCCTTTAAAAGGTCTTACTTTTCCATCGCTTTAATTTGCTCCAGACAGTAGCTTGCCTGTTGTACAGTCTCTTCGTGCTTGTGCTGCTTTCCGTAGCGCCAGGCAAAGGTGCAGAACTCGGACGCTTGCCGGAGCAGTCCCTGTTGCAGGTAAAGTAGCCCCAAGTTTGCCTTGTACACACCCGCTTCGGAGAGATCCGGGATTTGGGCGGCTAGTGCAATGGCCTCTTTGAGAAACCGTTCAGCCGAAGCGTAGTCTTCAAGGTTAGAGCATGCGACACTGAGATTTTCAGTATCGTCAGTCCCTCCTCCGTTAGCATGCCGTGTATCTCGGTGTACGCTTCGTACGCCTGCAGGAACGCTTGCTTCGCTTCCGCAAAGCGCTTACTCTCC ATCA G CAGCTGCGCGTACCAGTTCTTAGTGGTTCCCCACAGCTCCCGGATTTCCTTCCCGTTGTCATCGCCCAGCTGTTTCAGTTTCTCCTCCAGCTTGGCCAGCGTCCGCTCGAACCCTTGCGCGGCCTTATCCAAATGCCCTTGCAGTTGCGCGAGAAGCGCCACCTTTGAGCTGATGTGTAGCATTTTGATGTGATCCTCCAAAAATCCGTCCGAAAACAGGCGCTGCATAACGTTGACGAACAGTTTTTCGGCCTTGGCAAAATCCCCCACCTCCATCGCAAGGTTTACCATGATGTCGTAGATGTACGTGATGCCATCCTTGCTCTGCAGATCTTGCGCCATCTTGAGGGCGAGATGCAGCATCTGTT ]
[+] EMBL CNS08CED [ cgCCGCAG GA TC GAAATCTTGTTGTACACAATTTATTTTAATCTTCGAACAATAATTAAGGTAACAAAGTTCATCAACAGGGGAGAGTAAGTAAG GAACGTGCCATTCCTCTATAGCAACACTAGGCTGTGTTGTCAGTGTGTCCACAACATCGTGCATCGAAGTGTCCTTTAAAAGGTCTTACTTTTCCATCGCTTTAATTTGCTCCAGACAGTAGCTTGCCTGTTGTACAGTCTCTTCGTGCTTGTGCTGCTTTCCGTAGCGCCAGGCAAAGGTGCAGAACTCGGACGCTTGCCGGAGCAGTCCCTGTTGCAGGTAAAGTAGCCCCAAGTTTGCCTTGTACACACCCGCTTCGGAGAGATCCGGGATTT ]
[-] EMBL CNS08F9N [ GCCGTGTATCTCGGTGTACGCTTCGTACGCCTGCAGGAACGCTTTCTTCGCTTCCGCAAAGCGCTTACTCTCC ATCAGG CAG TGCGCGTACCAGTTCTTAGTGATTCCCCACAGCTCCCGGATTTCCTTCCCGTTGTCATCGCCCAGCTGTTTCAGTTTCTCCTCCAGCTTGGCCAGCGTCCACTCGAACCCTTGCGCGGCCTTATCCAAATGCCCTTGCAGTTGCGCGAGATGCGCCACCTTTGAGCTGATGTGTAGCATTTTGATGTGGGGGTCCAAAAATCCGTCCGAAAACAGGCGCTGCATAACGTTGACGAACAGTTTTTCGGCCTTGGCAAAATCCCCCACCTCCATCGCAAGGTTTACCATGATGTCGTAGATGTACGTGATGCCATCCTTGCTCTGCAGATCTTGCGCCATCTTGAGGGCGAGATGCAGCATCTGTTCCGCCTTCTGATACTCTTCCTTCTGTATCGATAGGATGGAGCGTTTGATAATGGTAATCAGCTGACTTTCGGGCGTGTTTTCATCGTCGGACTTTTTGCTAAACCACGATAGGAAAGAACTCGCAGCGATGAAGTGCAGTGGCCCGGCGGTACGTTGCTTGCGCCGATTGTAATCGTCCTTGCTGCTGCCGTTCTGGTGGA GATGATTTGTTCCATTTGCCGGGATCGGGGCGTGATTCGTGAACGACGCGAGCGGTATCGTCAGGGGCGCTATTCGAGGATGATTGATGGAAATGAAAAA CCGTGACGCAAGGGAGGATGCAGTTGCCGAGCGGAACATTTTCTTGCCCTCGATGCACCACCACAACAGTTGTTCACAAATACTGTACAGAGGAGAAGATTAGGAGAAGATTTTCTTCACCAGCTTAAAATGGTTTTATT]
[-] EMBL CNS08CZ5 [ GCAAAGCGCTTACTCTCCGATCA GCCAG TGCGCGTACCAGTTCTTAGTG TTCCCCACAGCTCCCGGATTTCCTTCCCGTTGTCATCGCCCAGCTGTTTCAGTTTCTCCTCCAGCTTGGCCAGCGTCCGCTCGAACCCTTGCGCGGCCTTATCCAAATGCCCTTGCAGTTGCGCGAGATGCGCCACCTTTGAGCTGATGTGTAGCATTTTGATGTGATCCTCCAAAAATCCGTCCGAAAACAGGCGCTGCATAACGTTGACGAACAGTTTTTCGGCCTTGGCAAAATCCCCCACCTCCATCGCAAGGTTTACCATGATGTCGTAGATGTACGTGATGCCATCCTTGCTCTGCAGATCTTGCGCCATCTTGAGGGCGAGATGCAGCATCTGTTCCGCCTTCTGATACTCTTCCTTCTGTATCGATAGGATGGAGCGTTTGATAATGGTAATCAGCTGACTTTCGGGCGTGTTTTCATCGTCGGACTTTTTGCTAAACCACGATAGGAAAGAACTCGCAGCGATGAAGTGCAGTGGCCCGGCGGTACGTTG TTGCGCCGATTGTAATCGTCCTTGCTGCTGCCGTTCTGGTGGA GATGATTTGTTCCATTTGCCGGGATCGGGGCGTGATTCGTGAACGACGCGAGCGGTATCGTCAGGGGCGCTATTCGAGGATGATTGATGGAAATGAAAAATCCGTGACGCAAGGGAGGATGCTGTTGCCGAGCGGAACATTTTCTTGCCCTCGATGCACCACCACAACAG ]
[-] EMBL BX625634 [ CGCCCAGTTGTTTCAGTTTCTCCTCCAGCTTGGCCAGCGTCCACTCGAACCCTTGCGCGGCCTTATCCAAATGTCCTTGCAGCTGCGCGAGATGCGCCACCTTTGAGCTGATGTGCAGCATTTTGATGTGATCCTCCAAAAATCCGTCCGAAAACAGGCGCTGCATAACGTTGACGAACAGTTTCTCGGCCTTGGCAAAATCGCCCACCTCCATCGCAAGGTTTGCCATGATGTCGTAGATGTACGTGATGCCGTCCTTGCTCTGCAGATCTTGCGCCATCTTGAGGGCGAGATGCAGCATCTGTTCCGCCTTCTGATACTCTTCCTTCTGTATCGATAGGATGGAGCGTTTGATAATGGTAATCAGCTGACTTTCGGGCGTGTTTTCATCGTCGGACTTTTTGCTAAACCAGGATAGGAAAGAACTCGCAGCGATGAAGTGCAGTGGCCCGGCGGTACGTTGCTTGCGCCGATTGTAATCGTCCTTGTTGCTGCCGTTCTGGTGGAGCTGATGATTTGTTCCATTTGCCGGGATCGGGGCGTGATTCGTGAACGACGCGAGCGGTATCGTCAGGGGCGCTATTCGAGGATGATTGATGGAAATGAAAAA CCGTGACGCAAGGGAGGATGCTGTTGCCGAGCGGAACATTTTCTTGCCCTCTATGCACCACCACAACAGTTGTTCCTAAATACTGTACAGAGG AGATTAGGAG ]
[-] EMBL BM656410 [ ACCCTTGCGCGGCCTTATCCAAATGTCCTTGCAGCTGCGCGAGATGCGCCACCTTTGAGCTGATGTGCAGCATTTTGATGTGATCCTCCAAAAATCCGTCCGAAAACAGGCGCTGCATAACGTTGACGAACAGTTTCTCGGCCTTGGCAAAATCGCCCACCTCCATCGCAAGGTTTGCCATGATATCGTAGATGTACGTGATGCCGTCCTTGCTCTGCAGATCTTGTGCCATCTTGAGGGCGAGATGCAGCATCTGTTCCGCCTTCTGATACTCTTCCTTCTGTATCGATAGGATGGAGCGTTTGATAATGGTAATCAGCTGACTTTCGGGCGTGTTTTCATCGTCGGACTTTTTGCTAAACCACGATAGGAAAGAACTCGCAGCGATGAAGTGCAGTGGCCCGGCGGTACGTTGCTTGCGCCGATTGTAATCGTCCTTGCTGGTGCCGTTCTGGTGGA GCTGATTTGTTCCATTTGCCGGGATCGGGGCGTGATTCGTGAACGACGCGAGCGGTATCGTCAGGGGCGCTATTCGAGGATGATTGATGGAAATGAAAAA CCGTGACGCAAGGGAGGATGCTGTTGCCGAGCGGAACATTTTCTTGCCCTCTATGCACCACCACACCAGTTGTTCACAAATACTGTACA GAGAAGATTAGTAGAAGATTTTCTcgg ]
[-] EMBL CNS08CEC [ ATCGTCCTTGCTGCTGCCGTTCTGGTGGA GATGATTTGTTCCATTTGCCGGGATCGGGGCGTGATTCGTGAACGACGCGAGCGGTATCGTCAGGGGCGCTATTCGAGGATGATTGATGGAAATGAAAAA CCGTGACGCAAGGGAGGATGCTGTTGCCGAGCGGAACATTTTCTTGCCCTCGATGCACCACCACAACAGTTGTTCACAAATACTGTACAGAGGAGAAGATTAGGAGAAGATTTTCTTCACCAG ]
consensusID : consensus_8740#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 664 fasta sequence
[GAGCTGATGTGCAGCATTTTGATGTGATCCTCCAAAAATCCGTCCGAAAACAGGCGCTGCATAACGTTGACGAACAGTTTCTCGGCCTTGGCAAAATCGCCCACCTCCATCGCAAGGTTTGCCATGATATCGTAGATGTACGTGATGCCGTCCTTGCTCTGCAGATCTTGTGCCATCTTGAGGGCGAGATGCAGCATCTGTTCCGCCTTCTGATACTCTTCCTTCTGTATCGATAGGATGGAGCGTTTGATAATGGTAATCAGCTGACTTTCGGGCGTGTTTTCATCGTCGGACTTTTTGCTAAACCACGATAGGAAAGAACTCGCAGCGATGAAGTGCAGTGGCCCGGCGGTACGTTGCTTGCGCCGATTGTAATCGTCCTTGCTGGTGCCGTTCTGGTGGAGCTGATTTGTTCCATTTGCCGGGATCGGGGCGTGATTCGTGAGCGACGCGAGCGGTATCGTCAGGGGCGCTATTCGAGGATGATTGATGGAAATGAAAAACCGTGACGCAAGGGAGGATGCTGTTGCCGAGCGGAACATTTTCTTGCCCTCTATGCACCACCACACCAGTTGTTCACAAATACTGTACAGAGAAGATTAGTAGAAGATTTCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGG]
[-] EMBL BM627920 [GAGCTGATGTGCAGCATTTTGATGTGATCCTCCAAAAATCCGTCCGAAAACAGGCGCTGCATAACGTTGACGAACAGTTTCTCGGCCTTGGCAAAATCGCCCACCTCCATCGCAAGGTTTGCCATGATATCGTAGATGTACGTGATGCCGTCCTTGCTCTGCAGATCTTGTGCCATCTTGAGGGCGAGATGCAGCATCTGTTCCGCCTTCTGATACTCTTCCTTCTGTATCGATAGGATGGAGCGTTTGATAATGGTAATCAGCTGACTTTCGGGCGTGTTTTCATCGTCGGACTTTTTGCTAAACCACGATAGGAAAGAACTCGCAGCGATGAAGTGCAGTGGCCCGGCGGTACGTTGCTTGCGCCGATTGTAATCGTCCTTGCTGGTGCCGTTCTGGTGGAGCTGATTTGTTCCATTTGCCGGGATCGGGGCGTGATTCGTGAGCGACGCGAGCGGTATCGTCAGGGGCGCTATTCGAGGATGATTGATGGAAATGAAAAACCGTGACGCAAGGGAGGATGCTGTTGCCGAGCGGAACATTTTCTTGCCCTCTATGCACCACCACACCAGTTGTTCACAAATACTGTACAGAGAAGATTAGTAGAAGATTTCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGG]
consensusID : consensus_8740#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 631 fasta sequence
[GCCGGGAGCTCGAGCACATGTGGCCTTTTTTTTTTTTTTTTAAACTTCTTCTTCATATCGCCCGCCGGCGATCGAAATCTTTTTGTACACAATTTATTTTAATCTTCGAACAATAATTAAGGTAACAAAGTTCATCAACAGGGGAGAGTAAGTAAGGAACGTGCTCTATAATTTGCCATTCCTCTATAGCAACAGTAGGCTGTGTTGTCAGTGTGTCCACAACATCGTGCATCGAAGTGTCCTTTAAAAGGTCTTACTTTTTTTTTTTTTTAATTTGCTCCAGACAGTAGCTTGCCTGTTGTACAGTCTCTTCGTGCTTGTGCTGCTTTCCGTAGCGCCAGGCAAAGGTGCAGAACTCGGACGCTTGCCGGAGCAGTCCCTGTTGCAGGTAAAGTAGCCCCAAGTTTGCCTTGTACACACCCGCTTCGGAGAGATCCGGGATTTGGGCGGCAAGTGCAATGGCCTCTTTGAGAAACCGTTCAGCAGATGCGTAATCTTCAAGGTTAGAGCATGCGACACTGAGATTGTTCAGTATCGTCAGTCCCTCCTCCGTTAGCATGCCGTGTATCTCGGTGTACGCTTCGTACGCCTGCAGGAACGCTTTCGTTCGCTTCCGCAAAGCGCTTACTCT]
[-] EMBL CNS08UFW [GCCGGGAGCTCGAGCACATGTGGCCTTTTTTTTTTTTTTTTAAACTTCTTCTTCATATCGCCCGCCGGCGATCGAAATCTTTTTGTACACAATTTATTTTAATCTTCGAACAATAATTAAGGTAACAAAGTTCATCAACAGGGGAGAGTAAGTAAGGAACGTGCTCTATAATTTGCCATTCCTCTATAGCAACAGTAGGCTGTGTTGTCAGTGTGTCCACAACATCGTGCATCGAAGTGTCCTTTAAAAGGTCTTACTTTTTTTTTTTTTTAATTTGCTCCAGACAGTAGCTTGCCTGTTGTACAGTCTCTTCGTGCTTGTGCTGCTTTCCGTAGCGCCAGGCAAAGGTGCAGAACTCGGACGCTTGCCGGAGCAGTCCCTGTTGCAGGTAAAGTAGCCCCAAGTTTGCCTTGTACACACCCGCTTCGGAGAGATCCGGGATTTGGGCGGCAAGTGCAATGGCCTCTTTGAGAAACCGTTCAGCAGATGCGTAATCTTCAAGGTTAGAGCATGCGACACTGAGATTGTTCAGTATCGTCAGTCCCTCCTCCGTTAGCATGCCGTGTATCTCGGTGTACGCTTCGTACGCCTGCAGGAACGCTTTCGTTCGCTTCCGCAAAGCGCTTACTCT]
consensusID : consensus_8740#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 515 fasta sequence
[GTTTGCCATGATGTCGTAGATGTACGTGATGCCGTCCTTGCTCTGCAGATCTTGCGCCATCTTGAGGGCGAGATGCAGCATCTGTTCCGCCTTCTGATACTCTTCCTTCTGTATCGATAGGATGGAGCGTTTGATAATGGTAATCAGCTGACTTTCGGGCGTGTTTTCATCGTCGGACTTTTTGCTAAACCAGGATAGGAAAGAACTCGCAGCGATGAAGTGCAGTGGCCCGGCGGTACGTTGCTTGCGCCGATTGTAATCGTCCTTGTTGCTGCCGTTCTGGTGGAGCTGATGATTTGTTCCATTTGCCGGGATCGGGGCGTGATTCGTGAACGACGCGAGCGGTATCGTCAGGGGCGCTATTCGAGGATGATTGATGGAAATGAAAAACCGTGACGCAAGGGAGGATGCTGTTGCCGAGCGGAACATTTTCTTGCCCTCTATGCACCACCACAACAGTTGTTCCTAAATACTGTACCAGAGGAGATTAGGAGAAATTATAACCNNGGGATCTG]
[-] EMBL AL694968 [GTTTGCCATGATGTCGTAGATGTACGTGATGCCGTCCTTGCTCTGCAGATCTTGCGCCATCTTGAGGGCGAGATGCAGCATCTGTTCCGCCTTCTGATACTCTTCCTTCTGTATCGATAGGATGGAGCGTTTGATAATGGTAATCAGCTGACTTTCGGGCGTGTTTTCATCGTCGGACTTTTTGCTAAACCAGGATAGGAAAGAACTCGCAGCGATGAAGTGCAGTGGCCCGGCGGTACGTTGCTTGCGCCGATTGTAATCGTCCTTGTTGCTGCCGTTCTGGTGGAGCTGATGATTTGTTCCATTTGCCGGGATCGGGGCGTGATTCGTGAACGACGCGAGCGGTATCGTCAGGGGCGCTATTCGAGGATGATTGATGGAAATGAAAAACCGTGACGCAAGGGAGGATGCTGTTGCCGAGCGGAACATTTTCTTGCCCTCTATGCACCACCACAACAGTTGTTCCTAAATACTGTACCAGAGGAGATTAGGAGAAATTATAACCNNGGGATCTG]
consensusID : consensus_8740#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 473 fasta sequence
[CCGCCGGCGATCGAAATCTTTTTGTACACAATTTATTTTAATCTTCGAACAATAATTAAGGTAACAAAGTTCATCAACAGGGGAGAGTAAGTAAGGAACGTGCTCTATAATTTGCCATTCCTCTATAGCAACAGTAGGCTGTGTTGTCAGTTTGTCCACAACATCGTGCATCGAAGTGTCCTTTAAAAGGTCTTACTTTTCCATCGCTTTAATTTGCTCCAGACAGTAGCTTGCCTGTTGTACAGTCTCTTCGTGCTTTTCCTGCTTTCCGTAGCGCCAGGCAAAGGTGCAGAACTCGGACGCTTGCCGGAGCAGTCCCTGTTGCAGGTAAAGTAGCCCCAAGTTTGCCTTGTACACACCCGCTTCGGAGAGATCCGGGATTTGGGCGGCAAGTGCAATGGCCTCTTTGAGAAACCGTTCAGCAGAAGCGTAAAAAAAAAAAGAAAAAAAATAAAAAAATAAAATTGTACAGT]
[+] EMBL CNS08UFX [CCGCCGGCGATCGAAATCTTTTTGTACACAATTTATTTTAATCTTCGAACAATAATTAAGGTAACAAAGTTCATCAACAGGGGAGAGTAAGTAAGGAACGTGCTCTATAATTTGCCATTCCTCTATAGCAACAGTAGGCTGTGTTGTCAGTTTGTCCACAACATCGTGCATCGAAGTGTCCTTTAAAAGGTCTTACTTTTCCATCGCTTTAATTTGCTCCAGACAGTAGCTTGCCTGTTGTACAGTCTCTTCGTGCTTTTCCTGCTTTCCGTAGCGCCAGGCAAAGGTGCAGAACTCGGACGCTTGCCGGAGCAGTCCCTGTTGCAGGTAAAGTAGCCCCAAGTTTGCCTTGTACACACCCGCTTCGGAGAGATCCGGGATTTGGGCGGCAAGTGCAATGGCCTCTTTGAGAAACCGTTCAGCAGAAGCGTAAAAAAAAAAAGAAAAAAAATAAAAAAATAAAATTGTACAGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8740#1 ------------------------------------------------------------
consensus_8740#3 ------------------------------------------------------------
consensus_8740#0 TTTTTCACCCTCTTCTTCATATCGCCCGCAGCGATTCAGAAATCTTGTTGTACACAATTT 60
consensus_8740#2 ------------------------------------------------------------
consensus_8740#4 ------------------------------------------------------------
consensus_8740#1 ------------------------------------------------------------
consensus_8740#3 ------------------------------------------------------------
consensus_8740#0 ATTTTAATCTTCGAACAATAATTAAGGTAACAAAGTTCATCAACAGGGGAGAGTAAGTAA 120
consensus_8740#2 ------------------------------------------------------------
consensus_8740#4 ------------------------------------------------------------
consensus_8740#1 ------------------------------------------------------------
consensus_8740#3 ------------------------------------------------------------
consensus_8740#0 GGAACGTGCCATTCCTCTATAGCAACAGTAGGCTGTGTTGTCAGTGTGTCCACAACATCG 180
consensus_8740#2 ------------------------------------------------------------
consensus_8740#4 ------------------------------------------------------------
consensus_8740#1 ------------------------------------------------------------
consensus_8740#3 ------------------------------------------------------------
consensus_8740#0 TGCATCGAAGTGTCCTTTAAAAGGTCTTACTTTTCCATCGCTTTAATTTGCTCCAGACAG 240
consensus_8740#2 ------------------------------------------------------------
consensus_8740#4 ------------------------------------------------------------
consensus_8740#1 ------------------------------------------------------------
consensus_8740#3 ------------------------------------------------------------
consensus_8740#0 TAGCTTGCCTGTTGTACAGTCTCTTCGTGCTTGTGCTGCTTTCCGTAGCGCCAGGCAAAG 300
consensus_8740#2 ------------------------------------------------------------
consensus_8740#4 ------------------------------------------------------------
consensus_8740#1 ------------------------------------------------------------
consensus_8740#3 ------------------------------------------------------------
consensus_8740#0 GTGCAGAACTCGGACGCTTGCCGGAGCAGTCCCTGTTGCAGGTAAAGTAGCCCCAAGTTT 360
consensus_8740#2 ------------------------------------------------------------
consensus_8740#4 ------------------------------------------------------------
consensus_8740#1 ------------------------------------------------------------
consensus_8740#3 ------------------------------------------------------------
consensus_8740#0 GCCTTGTACACACCCGCTTCGGAGAGATCCGGGATTTGGGCGGCTAGTGCAATGGCCTCT 420
consensus_8740#2 ------------------------------------------------------------
consensus_8740#4 ------------------------------------------------------------
consensus_8740#1 ------------------------------------------------------------
consensus_8740#3 ------------------------------------------------------------
consensus_8740#0 TTGAGAAACCGTTCAGCCGAAGCGTAGTCTTCAAGGTTAGAGCATGCGACACTGAGATTT 480
consensus_8740#2 ------------------------------------------------------------
consensus_8740#4 ------------------------------------------------------------
consensus_8740#1 ------------------------------------------------------------
consensus_8740#3 ------------------------------------------------------------
consensus_8740#0 TCAGTATCGTCAGTCCCTCCTCCGTTAGCATGCCGTGTATCTCGGTGTACGCTTCGTACG 540
consensus_8740#2 ------------------------------------------------------------
consensus_8740#4 ------------------------------------------------------------
consensus_8740#1 ------------------------------------------------------------
consensus_8740#3 ------------------------------------------------------------
consensus_8740#0 CCTGCAGGAACGCTTGCTTCGCTTCCGCAAAGCGCTTACTCTCCATCAGCAGCTGCGCGT 600
consensus_8740#2 ------------------------------------------------------------
consensus_8740#4 ------------------------------------------------------------
consensus_8740#1 ------------------------------------------------------------
consensus_8740#3 ------------------------------------------------------------
consensus_8740#0 ACCAGTTCTTAGTGATTCCCCACAGCTCCCGGATTTCCTTCCCGTTGTCATCGCCCAGCT 660
consensus_8740#2 ------------------------------------------------------------
consensus_8740#4 ------------------------------------------------------------
consensus_8740#1 ------------------------------------------------------------
consensus_8740#3 ------------------------------------------------------------
consensus_8740#0 GTTTCAGTTTCTCCTCCAGCTTGGCCAGCGTCCACTCGAACCCTTGCGCGGCCTTATCCA 720
consensus_8740#2 ------------------------------------------------------------
consensus_8740#4 ------------------------------------------------------------
consensus_8740#1 -----------------------------------GAGCTGATGTGCAGCATTTTGATGT 25
consensus_8740#3 ------------------------------------------------------------
consensus_8740#0 AATGCCCTTGCAGTTGCGCGAGATGCGCCACCTTTGAGCTGATGTGTAGCATTTTGATGT 780
consensus_8740#2 ------------------------------------------------------------
consensus_8740#4 ------------------------------------------------------------
consensus_8740#1 GATCCTCCAAAAATCCGTCCGAAAACAGGCGCTGCATAACGTTGACGAACAGTTTCTCGG 85
consensus_8740#3 ------------------------------------------------------------
consensus_8740#0 GATCCTCCAAAAATCCGTCCGAAAACAGGCGCTGCATAACGTTGACGAACAGTTTTTCGG 840
consensus_8740#2 -------------GCCGGGAGCTCGAGCACATGTGGCCTTTTTTTTTTTTTTTTAAACTT 47
consensus_8740#4 ------------------------------------------------------------
consensus_8740#1 CCTTGGCAAAATCGCCCACCTCCATCGCAAGGTTTGCCATGATATCGTAGATGTA-CGTG 144
consensus_8740#3 -------------------------------GTTTGCCATGATGTCGTAGATGTA-CGTG 28
consensus_8740#0 CCTTGGCAAAATCCCCCACCTCCATCGCAAGGTTTACCATGATGTCGTAGATGTA-CGTG 899
consensus_8740#2 CTTCTTCATATCGCCCGCCGGCGATCGAAATCTTTTTGTACACAATTTATTTTAATCTTC 107
consensus_8740#4 --------------CCGCCGGCGATCGAAATCTTTTTGTACACAATTTATTTTAATCTTC 46
*** * ** * * * *
consensus_8740#1 ATGCCGTCCTTGCTCTGCAGATCTTGTGCCATCTTGAGGGCGAGATGCAGCATCTGTTCC 204
consensus_8740#3 ATGCCGTCCTTGCTCTGCAGATCTTGCGCCATCTTGAGGGCGAGATGCAGCATCTGTTCC 88
consensus_8740#0 ATGCCATCCTTGCTCTGCAGATCTTGCGCCATCTTGAGGGCGAGATGCAGCATCTGTTCC 959
consensus_8740#2 GAACAATAATTAAGGTAACAAAGTTCATCAACAGGGGAGAGTAAGTAAGGAACGTGCTCT 167
consensus_8740#4 GAACAATAATTAAGGTAACAAAGTTCATCAACAGGGGAGAGTAAGTAAGGAACGTGCTCT 106
* * ** * * ** * * * * * * * * ** **
consensus_8740#1 GCCTTCTGATACTCTTCCTTCTGTATCGATAGGATGGAGCGTTTGATAATGGTAATCAGC 264
consensus_8740#3 GCCTTCTGATACTCTTCCTTCTGTATCGATAGGATGGAGCGTTTGATAATGGTAATCAGC 148
consensus_8740#0 GCCTTCTGATACTCTTCCTTCTGTATCGATAGGATGGAGCGTTTGATAATGGTAATCAGC 1019
consensus_8740#2 ATAATTTGCCATTCCTCTATA-GCAACAGTAGGCTGTGTTGTCAGTGTGTCCACAACATC 226
consensus_8740#4 ATAATTTGCCATTCCTCTATA-GCAACAGTAGGCTGTGTTGTCAGTTTGTCCACAACATC 165
* ** * ** ** * * * * **** ** ** * * * ** *
consensus_8740#1 TGACTTTCGGGCGTGTTTTCATCG-TCGGACTTTTTG------CTAAACCACGATAGGAA 317
consensus_8740#3 TGACTTTCGGGCGTGTTTTCATCG-TCGGACTTTTTG------CTAAACCAGGATAGGAA 201
consensus_8740#0 TGACTTTCGGGCGTGTTTTCATCG-TCGGACTTTTTG------CTAAACCACGATAGGAA 1072
consensus_8740#2 GTGCATCGAAGTGTCCTTTAAAAGGTCTTACTTTTTTTTTTTTTTAATTTGCTCCAGACA 286
consensus_8740#4 GTGCATCGAAGTGTCCTTTAAAAGGTCTTACTTTTCCATCGCTTTAATTTGCTCCAGACA 225
* * * ** *** * * ** ****** *** ** *
consensus_8740#1 AGAACTCGCA-GCGATGAAGTGCAGTGGC-CCGGCGGTACGTTGC-TTGCGCCGATTGTA 374
consensus_8740#3 AGAACTCGCA-GCGATGAAGTGCAGTGGC-CCGGCGGTACGTTGC-TTGCGCCGATTGTA 258
consensus_8740#0 AGAACTCGCA-GCGATGAAGTGCAGTGGC-CCGGCGGTACGTTG--TTGCGCCGATTGTA 1128
consensus_8740#2 GTAGCTTGCCTGTTGTACAGTCTCTTCGTGCTTGTGCTGCTTTCCGTAGCGCCAG--GCA 344
consensus_8740#4 GTAGCTTGCCTGTTGTACAGTCTCTTCGTGCTTTTCCTGCTTTCCGTAGCGCCAG--GCA 283
* ** ** * * *** * * * * * ** * ***** * *
consensus_8740#1 ATCGTCCTTGCTGGTGCCGTTCTGGTGGAGCTGAT---TTGTTCCATTTGCCG-GGATCG 430
consensus_8740#3 ATCGTCCTTGTTGCTGCCGTTCTGGTGGAGCTGATGATTTGTTCCATTTGCCG-GGATCG 317
consensus_8740#0 ATCGTCCTTGCTGCTGCCGTTCTGGTGGAGATGAT---TTGTTCCATTTGCCG-GGATCG 1184
consensus_8740#2 AAGGTGCAGAACTCGGACGCT-TGCCGGAGCAGTC--CCTGTTGCAGGTAAAGTAGCCCC 401
consensus_8740#4 AAGGTGCAGAACTCGGACGCT-TGCCGGAGCAGTC--CCTGTTGCAGGTAAAGTAGCCCC 340
* ** * * ** * ** **** * **** ** * * * *
consensus_8740#1 GGGCGTGATTCGTGAGCGACGCGAGCGGTATCGTCAGGGGCGCTATTCGAGGATG-ATTG 489
consensus_8740#3 GGGCGTGATTCGTGAACGACGCGAGCGGTATCGTCAGGGGCGCTATTCGAGGATG-ATTG 376
consensus_8740#0 GGGCGTGATTCGTGAACGACGCGAGCGGTATCGTCAGGGGCGCTATTCGAGGATG-ATTG 1243
consensus_8740#2 AAGTTTGCCTTGTACACACCCGCTTCGGAGAGATCCGGGATTTGGGCGGCAAGTGCAATG 461
consensus_8740#4 AAGTTTGCCTTGTACACACCCGCTTCGGAGAGATCCGGGATTTGGGCGGCAAGTGCAATG 400
* ** * ** * * *** ** *** * ** * **
consensus_8740#1 ATGGAAATGAAAAACCGTGACGCAAGGGAGGATGCTGTTGCCGAGCGGAACATTTTCTTG 549
consensus_8740#3 ATGGAAATGAAAAACCGTGACGCAAGGGAGGATGCTGTTGCCGAGCGGAACATTTTCTTG 436
consensus_8740#0 ATGGAAATGAAAAACCGTGACGCAAGGGAGGATGCTGTTGCCGAGCGGAACATTTTCTTG 1303
consensus_8740#2 GCCTCTTTGAGAAACCGTTCAGCA--GATGCGTAATCTTCAAG-GTTAGAGCATGCGACA 518
consensus_8740#4 GCCTCTTTGAGAAACCGTTCAGCA--GAAGCGTAAAAAAAAAAAGAAAAAAAATAAAAAA 458
*** ******* *** * * * * * *
consensus_8740#1 CCCTCTATGCACCACCACACCAGTTGTTCA-CAAATACTGTAC---AGAGAAGATTAGTA 605
consensus_8740#3 CCCTCTATGCACCACCACAACAGTTGTTCC-TAAATACTGTACC--AGAGGAGATTAGGA 493
consensus_8740#0 CCCTCGATGCACCACCACAACAGTTGTTCA-CAAATACTGTACAGAGGAGAAGATTAGGA 1362
consensus_8740#2 CTGAGATTGTTCAGTATCGTCAGTCCCTCCTCCGTTAGCATGCCGTGTATCTCGGTGTAC 578
consensus_8740#4 ATAAAATTGTACAGT--------------------------------------------- 473
** *
consensus_8740#1 GAAGATTTCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGG 664
consensus_8740#3 GAA-ATTATAACCNNGGGATCTG------------------------------------ 515
consensus_8740#0 GAAGATTTTCTTCACCAGCTTAAAATGGTTTTATT------------------------ 1397
consensus_8740#2 GCTTCGTACGCCTGCAGGAACGCTTTCGTTCGCTTCCGCAAAGCGCTTACTCT------ 631
consensus_8740#4 -----------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||