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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8753#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1997 fasta sequence
[CCGGTCGCGTGCTCCGTGCCGACCGGTGCGGGCGGCAGCGAGGAGCAACTGTTTGCTGTTTCGGATTCGGGCAACCATCGGGTGCTGATCGTCGACAGTGCTGGCACGGTGCTGCACAAGGTGGGCGGCAAGCAGAGCGGCTTCGTGGACGGTAATTTCACCAAGGCACGGTTCAACGCCCCGCAGGGTGTGGCGTTCCAGGGCACGGACGTGGTGTTTGTGGCGGACAACGAAAACCATGCCGTGCGGCGTATCGACCTGAAGGCGCGGCTCGTCAGCACCGTCGCTGGCAATGGCACGCAGGGGAACGACCGCACCGGGGGGAAGGTGGGTCGAGAGCAGCTGCTGTCCTCGCCGTGGGATGTGGCCGTGTACTCGACGCGCGATCTGGACATGTCGTTCCATGCGGACGAGGCAAGCGCACCGCCGTCCAAGGACGTGCTGTTGATAGCGATGGCCGGCATTCACCAGATCTGGGCCCTCTTCCTGCAGGACACCATCTGGTGGAAGTTCAAGAAGTACGGTGCCGGAACGTGCTGGGCTATTGCGGGCAACGGCCACGAGCAGAACCGCAACACATCGTACCCGCAGAGTGCGGCGTTCGCGCAACCGTCCGGGTTGGCGATAAATCGAACGGCGAAGGAGGTCTATCTTGCGGACAGCGAAAGTTCGGCGATCAGGAAAATTTCACTTGCCGATGGCAAAGTGATGGCCGTGGCCGGGGGCGATCGTAATCCATTGGATCTGTTCGCTTTCGGCGATGTGGATGGAAAGCAGTACGGGGCCAAGTTTCAGCACCCGCTCGGTGTGGCCTACAACCCACAGGACGGCTTCATCTACTTCGCCGATACGTACAATCACAAGATTAAGAAAATCGACGCCGCAACGAACTGTGCCACGACGTGCGAGTTCCGTGAAGCGAACGGTGCAGTTAGACGCTTCAACGAACCGGCCGGCCTGTGTTTGGACCGCTCCGGGCAGCTGCTGTACATTGCCGACACCAACAACCACGAGCTGCTGGTGGCCAACCTTACCGACTGTACCATCCGTCCGCTGAAGTTGAATTTCCGCGTGCCGGAAGAGCTGGACAGTGTGGCGGGCGAAGCGGAGCAAGGAGGTCGCCGTTCCGGCACACTGACCCTGAAGCCTGCGCGTCCAATCACAATGCATCCCAACGCGGGTCAGAGCTCCC-TCCGGTTGACGTTTAATTTCACCTTCCCCGAGCAAACGACCAAGCTGACCGAGGGCGCACCACAACAATGGTCCCTGGAGCTGCCGGCCGGTGGATGGAGTTGTGACAGTACCAAGGGCACGATCGATACGAAAACGCTTCAGCTGCTGATTGCACTTCCGCCCGGGAACGACGCAACGAATGGCAACGAACCGTCGAATCCGGTCGCGCTTACCTTCAAGCTGAACCTCTGCGAAGGGGACATTTGCTTCCCGAAA-AGNTTGTCGTGCTGCTGGAGGNGCAATACTCGGCGTCCGAAGCGGGCCACCCAAATGTGGACCGTTACGATGCGCAGGAAACGTACGAGCTGCAGCTGTCCCGCAAAACGGTAGCGCTGCAGCAGCCCTAAGTAAGCTGCTATTAAGCGCATCCGGCACAACGAACAAAAGCGCTCTTTTTAATGTTTTTACCTTCGAGTCGTAGGATACATCACGGGACGATGTAGTTGCATTTGTTATAGTCATTTAATTAGTAAGAGTTGGTGGCACATGCAGCAGCATGTGTACCTTCCCTTGGGTGTTGCATCTATTGTGGTAGTTTTTTTGATTTCGTTAAACTTTTGATATCTTTTTTGCCTTCATCAATCATCATCTGCAGCTGCAGCTTTACGGCTGGATTTCAGGGAACACGAACACGATGAACTGCACCGCACAGTGTTTCTCGAACATGCAATCGACAATCTGATGCCTCAACGACTTGCGTTCGGATAGATTTTCAAACAATACAAAACCGCACTGTCGACCAAATGGTGTCTAAATAAAAAAAG]
[+] EMBL BM602816 [CCGGTCGCGTGCTCCGTGCCGACCGGTGCGGGCGGCAGCGAGGAGCAACTGTTTGCTGTTTCGGATTCGGGCAACCATCGGGTGCTGATCGTCGACAGTGCTGGCACGGTGCTGCACAAGGTGGGCGGCAAGCAGAGCGGCTTCGTGGACGGTAATTTCACCAAGGCACGGTTCAACGCCCCGCAGGGTGTGGCGTTCCAGGGCACGGACGTGGTGTTTGTGGCGGACAACGAAAACCATGCCGTGCGGCGTATCGACCTGAAGGCGCGGCTCGTCAGCACCGTCGCTGGCAATGGCACGCAGGGGAACGACCGCACCGGGGGGAAGGTGGGTCGAGAGCAGCTGCTGTCCTCGCCGTGGGATGTGGCCGTGTACTCGACGCGCGATCTGGACATGTCGTTCCATGCGGACGAGGCAAGCGCACCGCCGTCCAAGGACGTGCTGTTGATAGCGATGGCCGGCATTCACCAGATCTGGGCCCTCTTCCTGCAGGACACCATCTGGTGGAAGTTCAAGAAGTACGGTGCCGGAACGTGCTGGGCTATTGCGGGCAACGGCCACGAGCAGAACCGCAACACATCGTACCCGCAGAGTGCGGCGTTCGCGCAACCGTCCGGGTTGGCGATAAATC ]
[+] EMBL AGA283113 [ gasssCTTCGTGGACGGTAATTTCACCAAGGCACGGTTCAACGCCCCGCA GGTGTGGCGTTCCAGGGCACGGACGTKGTGTTTGTGGCGGACAACGAAAACCATGCCGTGCGGCGTATCGACCTGAAGGCGCGGCTCGTCAGCACCGTCGCAGGCAATGGCACGCAGGGGAACGACCGCATCGGGGGGAAGGTGGGTCGAGAGCAGCTGCTGTGCTCGCCGTGGGATGTGGCCGTGTACTCGACGCGCGATCTGGACATGTCGTTCCATGCGG ]
[+] EMBL BX622122 [ ACCAGATCTGGGCCCTCTTCCTGCAGGACACCATCTGGTGGAAGTTCAAGAAGTACGGTGCCGGGACGTGCTGGGCTATTGCGGGCAACGGCCACGAGCAGAACCGCAACACATCGTACCCGCAGAGTGCGGCGTTCGCGCAACCGTCCGGGTTGGCGATAAATCGAACGGCGAAGGAGGTCTATCTTGCGGACAGCGAAAGTTCGGCGATCAGGAAAATTTCACTTGCCGATGGCAAAGTGATGGCCGTGGCCGGGGGCGATCGTAATCCATTGGATCTGTTCGCTTTCGGCGATGTGGATGGAAAGCAGTACGGGGCCAAGTTTCAGCACCCGCTCGGTGTGGCCTACAACCCACAGGACGGCTTCATCTACTTCGCCGATACGTACAATCACAAGATTAAGAAAATCGACGCCGCAACGAACTGTGCCACGACGTGCGAGTTCCGTGAAGCGAACGGTGCAGTTAGACGCTTCAACGAACCGGCCGGCCTGTGTTTGGACCGCTCCGGGCAGCTGCTGTACATTGCCGACACCAACAACCACGAGCTGCTGGTGGCCAACCTTACCGACTGTACCATCCGTCCGCTGAAGTTGAATTTCCGCGTGCCGGAAGAGCTGGACAGTGTGGCGGGCGAAGCGGAGCAAGGAGGTCGCCGTTCCGGCACACTGACCCTGAAGCCTGCGCGTCCAATCACAATGCATCCTAACGCGGGTCAGAGCTCCCTTCCGGTTGACGTTTAATTTCACCTTCCCCGAGCAAACGACCAAGCTGACCGAGGGCGCACCACAACAATGGTCCCTGGAGCTGCCGGCCGGTGGATGGAGTTGTG ]
[+] EMBL BX625191 [ AGCGAAAGTTCGGCGATCAGGAAAATTTCACTTGCCGATGGCAAAGTGATGGCCGTGGCCGGGGGCGATCGTAATCCATTGGATCTGTTCGCTTTCGGCGATGTGGATGGAAAGCAGTACGGGGCCAAGTTTCAGCACCCGCTCGGTGTGGCCTACAACCCACAAGACGGCTTCATCTACTTCGCCGATACGTACAATCACAAGATTAAGAAAATCGACGCCGCAACGAACTGTGCCACGACGTGCGAGTTCCGTGAAGCGAACGGTGCAGTTAGACGCTTCAACGAACCGGCCGGCCTATGTTTGGACCGCTCCGGGCAGCTGCTGTACATTGCCGACACCAACAACCACGAGCTGCTGGTGGCCAACCTTACCGACTGTACCATCCGTCCGCTGAAGTTGAATTTCCGCGTGCCGGAAGAGCTGGACAGTGTGGCGGGCGAAGCGGAGCAAGGAGGTCGCCGTTCCGGCACACTGACCCTGAAGACTGCGCGTCCAATCACAATGCATCCCAACGCGGGTCAGAGCTCCC TCCGGTTGACGTTTAATTTCACCTTCCCCGAGCAAACGACCAAGCTGACCGAGGGCGCACCACAACAATGGTCCCTGGAGCTGCCGGCTGGTGGATGGAGTTGTGACAGTACCAAGGGCACGATCGATACGAAAACGCTTCAGCTGCTGATTGCACTTCCGCCCGGGAACGACGCAACGAATGGCAACGAACCGTCGAATCCGGGTGCGCTTACCTTCAAGCTGAACCTCTGCGAAGGGGACATTTGCTTCCCGAAA AGNTTGTCGTGCTGCTGGAGGNGCAATACT ]
[+] EMBL BX628397 [ TAAGAAAATCGACGCCGCAACGAACTGTGCCACGACGTGCGAGTTCCGTGAAGCGAACGGTGCAGTTAGACGCTTCAACGAACCGGCCGGCCTGTGTTTGGACCGCTCCGGGCAGCTGCTGTACATTGCCGACACCAACAACCACGAGCTGCTGGTGGCCAACCTTACCGACTGTACCATCCGTCCGCTGAAGTTGAATTTCCGCGTGCCGGAAGAGCTGGACAGTGTGGCGGGCGAAGCGGAGCAAGGAGGTCGCCGTTCCGGCACACTGACCCTGAAGCCTGCGCGTCCAATCACAATGCATCCCAACGCGGGTCAGAGCTCCC TCCGGTTGACGTTTAATTTCACCTTCCCCGAGCAAACGACCAAGCTGACCGAGGGCGCACCACAACAATGGTCCCTGGAGCTGCCGGCCGGTGGATGGAGTTGTGACAGTACCAAGGGCACGATCGATACGAAAACGCTTCAGCTGCTGATTGCACTTCCGCCCGGGAACGACGCAACGAATGGCAACGAACCGTCGAATCCGGTCGCGCTTACCTTCAAGCTGAACCTCTGCGAAGGGGACA ]
[+] EMBL BX612920 [ AATGGCAACGAACCGTCGAATCCGGTCGCGCTTACCTTCAAGCTGAACCTCTGCGAAGGGGACATTTGCTTCCCGAAAGAGTTTGTCGTGCTGCTGGAGGTGCAATACTCGGCGTCCGAAGCGGGCCACCCAAATGTGGACCGTTACGATGCGCAGGAAACGTACGAGCTGCAGCTGTCCCGCAAAACGGTAGCGCTGCAGCAGCCCTAAGTAAGCTGCTATTAAGCGCATCCGGCACAACGAACAAAAGCGCTCTTTTTAATGTTTTTACCTTCGAGTCGTAGGATACATCACGGGACGATGTAGTTGCATTTGTTATAGTCATTTAATTAGTAAGAGTTGGTGGCACATGCAGCAGCATGTGTACCTTCCCTTGGGTGTTGCATCTATTGTGGTAGTTTTTTTGATTTCGTTAAACTTTTGATATCTTTTTTGCCTTCATCAATCATCATCTGCAGCTGCAGCTTTACGGCTGGATTTCAGGGAACACGAACACGATGAACTGCACCGCACAGTGTTTCTCGAACATGCAATCGACAATCTGATGCCTCAACGACTTGCGTTCGGATAGATTTTCAAACAATACAAAACCGCACTGTCGACCAAATGGTGTCTAAATAAAAAAAG]
consensusID : consensus_8753#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 944 fasta sequence
[GGCCAGAATCGGCACGATTGGAATTTCACCAAGGCACGGTTCAACGCCCCGCAGGGTGTGGCGTTCCAGGCACGGACGTGGTGTTTGTGGCGGACAACGAAAACCATGCCGTGCGGCGTATCGACCTGAAGGCGCGGCTCGTCAGCACCATCGCTGGCAATGGCACGCAGGGGAACTACCGCACCGGGGGGAAGGTGGGTCGAGAGCAGCTGCTGTCCTCGCCGTGGGATGTGGCCGTGTACTCGACGCGCGATCTGGACATGTCGTTCCATGCGGACGAGGCGAGCGCACCGCCGTCCAAGGACGTGCTGTTGATAGCGATGGCCGGCATTCACCAGATCTGGGCCCTCTTCCTGCAGGACACCATCTGGTGGAAGTTCAAGAAGTACGGTGCCGGGACGTGCTGGGCTATTGCGGGCAACGGCCACGAGCAGAACCGCAACACATCGTACCCGCAGAGTGCGGCGTTCGCGCAACCGTCCGGGTTGGCGATAAATCGAACGGCGAAGGAGGTCTATCTTGCGGACAGCGAAAGTTCGGCGATCAGGAAAATTTCACTTGCCGATGGCAAAGTGATGGCCGTGGCCGGGGGCGATCGTAATCCATTGGATCTGTTCGCTTTTCGGGCGATGTGGATGGAAAAGCAGTACGGGGCCAAGTTCAGGCACCCGCTCCGGTGTGGCCTACAACCAACAAGGACGGGTTTTCAATCTACTTCGCCGATTACGGTACAATTCACCAAGGATTTACAGGAAAATTCGGAACGCCCGAAAACGAACACTTGTTTGCCAAACGAACTTCCGAAGTTTCCCGATGAAAAACAAACACGTTGTCACATTTTTAGAAACGCGCTTTTAACCAAACCGGCCCGGGCCTCTTTGTTTTGGAACCGCGCTCCCGGNCACTCTTCTCTAACATTTGCCCCAACCAAGCAACCACAGACT]
[+] EMBL BX467785 [GGCCAGAATCGGCACGATTGGAATTTCACCAAGGCACGGTTCAACGCCCCGCAGGGTGTGGCGTTCCAGGCACGGACGTGGTGTTTGTGGCGGACAACGAAAACCATGCCGTGCGGCGTATCGACCTGAAGGCGCGGCTCGTCAGCACCATCGCTGGCAATGGCACGCAGGGGAACTACCGCACCGGGGGGAAGGTGGGTCGAGAGCAGCTGCTGTCCTCGCCGTGGGATGTGGCCGTGTACTCGACGCGCGATCTGGACATGTCGTTCCATGCGGACGAGGCGAGCGCACCGCCGTCCAAGGACGTGCTGTTGATAGCGATGGCCGGCATTCACCAGATCTGGGCCCTCTTCCTGCAGGACACCATCTGGTGGAAGTTCAAGAAGTACGGTGCCGGGACGTGCTGGGCTATTGCGGGCAACGGCCACGAGCAGAACCGCAACACATCGTACCCGCAGAGTGCGGCGTTCGCGCAACCGTCCGGGTTGGCGATAAATCGAACGGCGAAGGAGGTCTATCTTGCGGACAGCGAAAGTTCGGCGATCAGGAAAATTTCACTTGCCGATGGCAAAGTGATGGCCGTGGCCGGGGGCGATCGTAATCCATTGGATCTGTTCGCTTTTCGGGCGATGTGGATGGAAAAGCAGTACGGGGCCAAGTTCAGGCACCCGCTCCGGTGTGGCCTACAACCAACAAGGACGGGTTTTCAATCTACTTCGCCGATTACGGTACAATTCACCAAGGATTTACAGGAAAATTCGGAACGCCCGAAAACGAACACTTGTTTGCCAAACGAACTTCCGAAGTTTCCCGATGAAAAACAAACACGTTGTCACATTTTTAGAAACGCGCTTTTAACCAAACCGGCCCGGGCCTCTTTGTTTTGGAACCGCGCTCCCGGNCACTCTTCTCTAACATTTGCCCCAACCAAGCAACCACAGACT]
consensusID : consensus_8753#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 837 fasta sequence
[ATNGCCCAGGCTTGACAGCGAAAGTTCGGCGATCAGGAAAATTTCACTTGGCCGATGGCAAAGTGATGGCCGTGGCTGGGGGCGATCGTAATCCATTGGATCTGTTCGCTTTCGGCGATGTGGATGGAAAGCAGTACGGGGCCAAGTTTCAGCACCCGCTCGCGTGTGGCCTACAACCACAAGACGGTTTCATCTACTTCGCCGATACGTACAATCACAAGTATTAAGTAATAATCGACGCCGCAACTGAACTGTGCCACTNACGTGCGATGTTTCCGTGAAGCTGAACGGTGCAGTTAGACGCTTCAACGAACCGGCCGGCTATGTTTGGACCGCTCCGGGCAGCCTGCTGTACATTGTCGACATCAACAACCACGAGCTGCTGGTGGGCAACCTTACCGACTGTACCATCCGTCCGCTGAAGTTGAATTTCCGCGTGCCGGAAGAGCTGGACAGTGTGGCGGGCGAAGCGNGAGCAAGGAGGTCGNCGTTCCGGCATCACTGACCCTGAAGACTGCGCGTCAATCACAATGCATTCCCAATCGCGGGTCAGAGCTCCCTCCGGTTGACGTTTAACTTTCACCTTCCCCGTAGCTAAACTGATCAAGCTGANCGAGGTGCGTCACCACAACAATGGTCCCTGGAGCTGCCGGCTGGTGGCATGGAGTTGTGACAGTACCAAGGGCACGATCGATACGAAAACGCTTCAGCTGCTGAGTTGCACTTCCGNCCGGGTAACGACGCAACGAATGGAACNAACCGTCGAATCCGGTTGCGCTTACCTTCAAGCTGAACCTCTGCGAAGGGGCACATTTGCATTCCCGAAAGAGTTGTCGT]
[+] EMBL AL693592 [ATNGCCCAGGCTTGACAGCGAAAGTTCGGCGATCAGGAAAATTTCACTTGGCCGATGGCAAAGTGATGGCCGTGGCTGGGGGCGATCGTAATCCATTGGATCTGTTCGCTTTCGGCGATGTGGATGGAAAGCAGTACGGGGCCAAGTTTCAGCACCCGCTCGCGTGTGGCCTACAACCACAAGACGGTTTCATCTACTTCGCCGATACGTACAATCACAAGTATTAAGTAATAATCGACGCCGCAACTGAACTGTGCCACTNACGTGCGATGTTTCCGTGAAGCTGAACGGTGCAGTTAGACGCTTCAACGAACCGGCCGGCTATGTTTGGACCGCTCCGGGCAGCCTGCTGTACATTGTCGACATCAACAACCACGAGCTGCTGGTGGGCAACCTTACCGACTGTACCATCCGTCCGCTGAAGTTGAATTTCCGCGTGCCGGAAGAGCTGGACAGTGTGGCGGGCGAAGCGNGAGCAAGGAGGTCGNCGTTCCGGCATCACTGACCCTGAAGACTGCGCGTCAATCACAATGCATTCCCAATCGCGGGTCAGAGCTCCCTCCGGTTGACGTTTAACTTTCACCTTCCCCGTAGCTAAACTGATCAAGCTGANCGAGGTGCGTCACCACAACAATGGTCCCTGGAGCTGCCGGCTGGTGGCATGGAGTTGTGACAGTACCAAGGGCACGATCGATACGAAAACGCTTCAGCTGCTGAGTTGCACTTCCGNCCGGGTAACGACGCAACGAATGGAACNAACCGTCGAATCCGGTTGCGCTTACCTTCAAGCTGAACCTCTGCGAAGGGGCACATTTGCATTCCCGAAAGAGTTGTCGT]
consensusID : consensus_8753#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 513 fasta sequence
[AGAATCGGCCCAGGGCTTAAGTCGGCGATCAGGAAAATTTCACTTGCCGATGGCAAAGTGATGGCCGTGGCCGGGGGCGATCGTAATCCATTGGATCTGTTCGCTTTCGGCGATGTGGATGGAAAGCAGTACGGGGCCAAGTTTCAGCACCCGCTCGGTGTGGCCTACAACCCACAGGACGGCTTCATCTACTTCGCCGATACGTACAATCACAAGATTAAGAAAATCGACGCCGCAACGAACTGTGCCACGACGTGCGAGTTCCGTGAAGCGAACGGTGCAGTTAGACGCTTCAAGCGAACCGGCCGGCTGTGTTTGGACCGCTCCGGGCAGCTGCTGTACATTGCCGACACCAACAACCACGAGCTGCTGGTGGCCAANCTTACCGACTGTACCATCCGTCCGCTGAACTTGAATTTCCGCGTGCCGGAAGAGCTGGACAGTGTGGCGGGCGAAGCGGAGCAAGGAGGTCGCCGTTCCGGACACTGACCCTGAAGCCTGCGCGTCCAATCA]
[+] EMBL AL692622 [AGAATCGGCCCAGGGCTTAAGTCGGCGATCAGGAAAATTTCACTTGCCGATGGCAAAGTGATGGCCGTGGCCGGGGGCGATCGTAATCCATTGGATCTGTTCGCTTTCGGCGATGTGGATGGAAAGCAGTACGGGGCCAAGTTTCAGCACCCGCTCGGTGTGGCCTACAACCCACAGGACGGCTTCATCTACTTCGCCGATACGTACAATCACAAGATTAAGAAAATCGACGCCGCAACGAACTGTGCCACGACGTGCGAGTTCCGTGAAGCGAACGGTGCAGTTAGACGCTTCAAGCGAACCGGCCGGCTGTGTTTGGACCGCTCCGGGCAGCTGCTGTACATTGCCGACACCAACAACCACGAGCTGCTGGTGGCCAANCTTACCGACTGTACCATCCGTCCGCTGAACTTGAATTTCCGCGTGCCGGAAGAGCTGGACAGTGTGGCGGGCGAAGCGGAGCAAGGAGGTCGCCGTTCCGGACACTGACCCTGAAGCCTGCGCGTCCAATCA]
consensusID : consensus_8753#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 512 fasta sequence
[CCGCCCACGCGTCCGAAACGTACGAGGTGCAGCTATCTCGCAAAACGGTAGCGCTGCATCAGCCCTAAGTAAGCTGCTATTAAGCGCATCCGGCGCAACGGCTGCACAACGAACGAAAGCGCTCTTTTTAATGTTTTTACCTTCGAGTCGTAGGATACATCACGGGACGATGTAGTTGCATTTGTTATAGTCATTTAATTAGTAAGAGTTGGATGCACATTCAGCAGCATGTGTACCTTCCCCTGGGGTGTTGCATCTATTGTGGTAGTTTTTTTTTTATTTCGTTAAACTTTTGATATC--TTTTGCCTTCATCAATCATCACCTGCAGCTGCAGCTTTACGGCTGGATTTCAGGGAACACGAACACGACGAACTGCACCGCACAGTGTTTCTCGAACATGCAATCGACAATCTGATCCCTCAACGACTTGCGTTTGGATAGATTTT--AGC-ATACAAAACCGCACTGTCGACCAAATGGTGTATCAAAATAAAAAAAAGCTTCCAAGATAACAT]
[+] EMBL BM587035 [CCGCCCACGCGTCCGAAACGTACGAGGTGCAGCTATCTCGCAAAACGGTAGCGCTGCATCAGCCCTAAGTAAGCTGCTATTAAGCGCATCCGGCGCAACGGCTGCACAACGAACGAAAGCGCTCTTTTTAATGTTTTTACCTTCGAGTCGTAGGATACATCACGGGACGATGTAGTTGCATTTGTTATAGTCATTTAATTAGTAAGAGTTGGATGCACATTCAGCAGCATGTGTACCTTCCCCTGGGGTGTTGCATCTATTGTGGTAGTTTTTTTTTTATTTCGTTAAACTTTTGATATC TTTTGCCTTCATCAATCATCACCTGCAGCTGCAGCTTTACGGCTGGATTTCAGGGAACACGAACACGACGAACTGCACCGCACAGTGTTTCTCGAACATGCAATCGACAATCTGATCCCTCAACGACTTGCGTTTGGATAGATTTT AGC ATACAAAACCGCACTGTCGACCAAATGGTGTATCAAAATAAAAAAAAGCTTCCAAGATAACAT]
[+] EMBL BX613851 [ CATCCGGCACAACGGCTGCACAACGAACAAAAGCGCTCTTTTTAATGTTTTTACCTTCGAGTCGTCGGATACATCACGGGACGATGTAGTTGCATTTGTTATAGTCATTTAATTAGTAAGAGTTGGTGGCACATGCAGCAGCATGTGTACCTT CCCTTGGGTGTTGCATCTATTGTGGTAG TTTTTTGATTTCGTTAAACTTTTGATATCTTTTTTGCCTTTATCAATCATCATCTGCAGCTGCAGCTTTACGGCTGGATTTCAGGGAACACGAACACGATGAACTGCACCGCACAGTGTTTCTCGAACATGCAATCGACAATCTGATGCCTCAACGACTTGCGTTCGGATAGATTTTTCAACAATACAAAACCGCACTGTCGACC ]
consensusID : consensus_8753#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 368 fasta sequence
[CCACCCAAATGTGGACCGTTACGATGCGCAGGAAACGTACGAGCTGCAGTTGTCCCGCAAAACGGTAGCGCTGCAGCAGCCCTAAGTAAGCTGCTATTAAGCGCATCCGGCACAACGAACAAAAGCGCTCTTTTTAATGTTTTTACCTTCGAGTCGTAGGATACATCACGGGACGATGTAGTTGCATTTGTNATAGTCATTTAATTAGTAAGAGTTGGTNNNCATKAGCAGCATGTGTACCTTCCCTTGGGTGTTGCATCTATTGTGGTAGTTTTTTTGATTTCGTTAAACTTTTGATATCTTTTTTCCTTCATCAATCATCATCTGCAGCTGCAGCTGATGATTGATGAAGGCAAAAAAAAAAAAAA]
[-] EMBL AGA281523 [CCACCCAAATGTGGACCGTTACGATGCGCAGGAAACGTACGAGCTGCAGTTGTCCCGCAAAACGGTAGCGCTGCAGCAGCCCTAAGTAAGCTGCTATTAAGCGCATCCGGCACAACGAACAAAAGCGCTCTTTTTAATGTTTTTACCTTCGAGTCGTAGGATACATCACGGGACGATGTAGTTGCATTTGTNATAGTCATTTAATTAGTAAGAGTTGGTNNNCATKAGCAGCATGTGTACCTTCCCTTGGGTGTTGCATCTATTGTGGTAGTTTTTTTGATTTCGTTAAACTTTTGATATCTTTTTTCCTTCATCAATCATCATCTGCAGCTGCAGCTGATGATTGATGAAGGCAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8753#2 ------------------------------------------------------------
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 ------------------------------------------------------------
consensus_8753#0 CCGGTCGCGTGCTCCGTGCCGACCGGTGCGGGCGGCAGCGAGGAGCAACTGTTTGCTGTT 60
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 ------------------------------------------------------------
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 ------------------------------------------------------------
consensus_8753#0 TCGGATTCGGGCAACCATCGGGTGCTGATCGTCGACAGTGCTGGCACGGTGCTGCACAAG 120
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 ------------------------------------------------------------
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 ------------GGCCAGAATCGGCACGATTGGAATTTCACCAAGGCACGGTTCAACGCC 48
consensus_8753#0 GTGGGCGGCAAGCAGAGCGGCTTCGTGGACGGTAATTTCACCAAGGCACGGTTCAACGCC 180
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 ------------------ATNG-CCCAGGCTTGACAGCGAAAGTTCGGCGATCAGGAAAA 41
consensus_8753#3 --------------------AG-AATCGGCCCAG-GGCTTAAGT-CGGCGATCAGGAAAA 37
consensus_8753#1 CCGCAGGGTGTGGCGTTCCAGG-CACGGACGTGGTGTTTGTGGC-GGACAACGAAAACCA 106
consensus_8753#0 CCGCAGGGTGTGGCGTTCCAGGGCACGGACGTGGTGTTTGTGGC-GGACAACGAAAACCA 239
consensus_8753#4 ----------------------------CCGC--CCACGCGTCCGAAACGTACGAGGTGC 30
consensus_8753#5 -------------CCACCCAAATGTGGACCGTTACGATGCGCAGGAAACGTACGAGCTGC 47
* *
consensus_8753#2 TTTCACTTGGC----CGATGGCAAAGTGATGGCCGTGGCTGGGGGCGATCGTAATC---- 93
consensus_8753#3 TTTCACTTG-C----CGATGGCAAAGTGATGGCCGTGGCCGGGGGCGATCGTAATC---- 88
consensus_8753#1 TGCCGTGCGGCGTATCGACCTGAAGGCGCGGCTCGTCAGCACCATCGCTGGCAATGGCAC 166
consensus_8753#0 TGCCGTGCGGCGTATCGACCTGAAGGCGCGGCTCGTCAGCACCGTCGCTGGCAATGGCAC 299
consensus_8753#4 AGCTATCTCGCAAAACGGTAGCGCTGCATCAGCCCTAAGTAA----GCTGCTATTA---- 82
consensus_8753#5 AGTTGTCCCGCAAAACGGTAGCGCTGCAGCAGCCCTAAGTAA----GCTGCTATTA---- 99
* ** * * * * * * *
consensus_8753#2 -CATTGGATCTGTT-CGCTTTCGGCGATGTGGATGGAAAGCAGTACGGGGCCAAGTTTCA 151
consensus_8753#3 -CATTGGATCTGTT-CGCTTTCGGCGATGTGGATGGAAAGCAGTACGGGGCCAAGTTTCA 146
consensus_8753#1 GCAGGGGAACTACCGCACCGGGGGGAAGGTGGGTCGAGAGCAGCTGCTGTCCTCGCCGTG 226
consensus_8753#0 GCAGGGGAACGACCGCACCGGGGGGAAGGTGGGTCGAGAGCAGCTGCTGTCCTCGCCGTG 359
consensus_8753#4 --AGCGCATCCGGCGCAACGGCTGCACAACGAAC-GAAAGC-GCTCTTTTTAATGTTTTT 138
consensus_8753#5 --AGCGCATCCGGC-----------ACAACGAAC-AAAAGC-GCTCTTTTTAATGTTTTT 144
* * * * * * *** * *
consensus_8753#2 GCACCCGCTCGCGTGT--GGCCTACAACC-ACA-AGACGGTTTCATCT--ACTTCGCCGA 205
consensus_8753#3 GCACCCGCTCG-GTGT--GGCCTACAACCCACA-GGACGGCTTCATCT--ACTTCGCCGA 200
consensus_8753#1 GGATGTGGCCGTGTACTCGACGCGCGATCTGGACATGTCGTTCCATGCGGACGAGGCGAG 286
consensus_8753#0 GGATGTGGCCGTGTACTCGACGCGCGATCTGGACATGTCGTTCCATGCGGACGAGGCAAG 419
consensus_8753#4 ACCTTCGAGT-CGTAG--GATACATCACGGGACGATGTAGTTGCATTTGTTATAGTCATT 195
consensus_8753#5 ACCTTCGAGT-CGTAG--GATACATCACGGGACGATGTAGTTGCATTTGTNATAGTCATT 201
* ** * * * * *** *
consensus_8753#2 TAC------GTACAATCACAAGTATTAAGTAATAATCGACGCCG--CAACTGAACTGTGC 257
consensus_8753#3 TAC------GTACAATCACAAG-ATTAAGAAA--ATCGACGCCG--CAAC-GAACTGTGC 248
consensus_8753#1 CGCACCGCCGTCCAAGGACGTGCTGTTGATAGCGATGGCCGGCATTCACCAGATCTGGGC 346
consensus_8753#0 CGCACCGCCGTCCAAGGACGTGCTGTTGATAGCGATGGCCGGCATTCACCAGATCTGGGC 479
consensus_8753#4 TAATTAGTAAGAGTTGGATGCACATTCAGCAGC-ATGTGTACCTTCCCCTGGGGTGTTGC 254
consensus_8753#5 TAATTAGTAAGAGTTGG-TNNNCATK-AGCAGC-ATGTGTACCTTCCCTTGGG-TGTTGC 257
* ** * * * **
consensus_8753#2 CACTNACGTGCGATGTTTCC----GTGAAGCTGAA--CGGTGCAGTTAGACGCTTCAA-C 310
consensus_8753#3 CAC-GACGTGCGAG--TTCC----GTGAAGC-GAA--CGGTGCAGTTAGACGCTTCAAGC 298
consensus_8753#1 CCTCTTCCTGCAGGA-CACC----ATCTGGTGGAAGTTCAAGAAGTACGGTGCCGGGA-C 400
consensus_8753#0 CCTCTTCCTGCAGGA-CACC----ATCTGGTGGAAGTTCAAGAAGTACGGTGCCGGAA-C 533
consensus_8753#4 ATCTATTGTGGTAGTTTTTTTTTTATTTCGTTAAACTTTTGATATCTTTTG-CCTTCATC 313
consensus_8753#5 ATCTATTGTGGTAGTTTTTTTG--ATTTCGTTAAACTTTTGATATCTTTTTTCCTTCATC 315
** * * ** * * * *
consensus_8753#2 GAACCGGCCGGCTATGTTTGGACCGCTCCGGGCAGCC-TGCTGTACATTGTCGACAT--- 366
consensus_8753#3 GAACCGGCCGGCTGTGTTTGGACCGCTCCGGGCAGC--TGCTGTACATTGCCGACAC--- 353
consensus_8753#1 GTGCTGGGCTATTGCGGGCA-ACGGCCACGAGCAGAACCGCAACACATCGTACCCGCAGA 459
consensus_8753#0 GTGCTGGGCTATTGCGGGCA-ACGGCCACGAGCAGAACCGCAACACATCGTACCCGCAGA 592
consensus_8753#4 AATC--ATCACCTGCAGCTGCAGCTTTACGGCTGGATTTCAGGGAACACGAACACGA--- 368
consensus_8753#5 AATC--ATCATCTGCAGCTGCAGCTG-ATGATTGA--TGAAGGCAAAAAAAAAAAAA--- 367
* * * * * *
consensus_8753#2 ---CAACAACCACG-AGCTGC------TGGTGGGCAACCTTACCGACTGTACCATCCGTC 416
consensus_8753#3 ---CAACAACCACG-AGCTGC------TGGTGGCCAANCTTACCGACTGTACCATCCGTC 403
consensus_8753#1 GTGCGGCGTTCGCGCAACCGTCCGGGTTGGCGATAAATCGAACGGCGAAGGAGGTCTATC 519
consensus_8753#0 GTGCGGCGTTCGCGCAACCGTCCGGGTTGGCGATAAATCGAACGGCGAAGGAGGTCTATC 652
consensus_8753#4 ---CGAACTGCACCGCACAGTGTTTCTCGAACATGCAATCGACAATCTGATCCCTCAACG 425
consensus_8753#5 ---A-------------------------------------------------------- 368
consensus_8753#2 C-GCTGAAGTTGAATTTCCGCGTGCCGGAAGAGCTGGACAGTGTGGCGGGCGAAGCGNGA 475
consensus_8753#3 C-GCTGAACTTGAATTTCCGCGTGCCGGAAGAGCTGGACAGTGTGGCGGGCGAAGCGG-A 461
consensus_8753#1 TTGCGGACAGCGAAAGTTCGGCGATCAGGAAAATTTCACT-TGCCGATGGCAAAGTGATG 578
consensus_8753#0 TTGCGGACAGCGAAAGTTCGGCGATCAGGAAAATTTCACT-TGCCGATGGCAAAGTGATG 711
consensus_8753#4 A-CTTGCGTTTGGATAGATTTTAGCATACAAAACCGCACTGTCGACCAAATGGTGTATCA 484
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 GCAA-GGAGGTCGNCGTTCCGGCATCACTGACCCTGAAGACT------GCGCGTC-AATC 527
consensus_8753#3 GCAA-GGAGGTCGCCGTTCCGGA--CACTGACCCTGAAGCCT------GCGCGTCCAATC 512
consensus_8753#1 GCCGTGGCCGGGGGCGATCGTAATCCATTGGATCTGTTCGCTTTTCGGGCGATGTGGATG 638
consensus_8753#0 GCCGTGGCCGGGGGCGATCGTAATCCATTGGATCTGTTCGCTTTC--GGCGATGTGGATG 769
consensus_8753#4 AAATAAAAAAAAGCTTCCAAGATAACAT-------------------------------- 512
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 ACAATGCATTCCCAATCGCGGGTCAGAGCTCCCTCCGGTTGACGTTTAACTTTCACCTTC 587
consensus_8753#3 A----------------------------------------------------------- 513
consensus_8753#1 GAAAAGCAGTACGGGGCCAAGTTCAGGCACCCGCTCCGGTGTGGCCTACAACCAACAAGG 698
consensus_8753#0 G-AAAGCAGTACGGGGCCAAGTTTCAGCACCCGCTC-GGTGTGGCCTACAACCCACAGGA 827
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 CCCGTAGCTAAACTGATCAAGCTGANCGAGGTGCGTCACCACAACAATGGTCCCTGGAGC 647
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 ACGGGTTTTCAATCTACTTCGCCGATTACGGTACAATTCACCAAGGATTTACAGGAAAAT 758
consensus_8753#0 CGGCTTCATCTACTTCGCCGATACGTACAATCACAAGATTAAGAAAATCGACGCCGCAAC 887
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 T---GCCGGCTGGTGGCATGGAGTT-GTGACAGTACCAA-GGGCACGATCGATACGAAAA 702
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 TCGGAACGCCCGAAAACGAACACTT-GTTTGCCAAACGA-ACTTCCGAAGTTTCCCGATG 816
consensus_8753#0 GAACTGTGCCACGACGTGCGAGTTCCGTGAAGCGAACGGTGCAGTTAGACGCTTCAACGA 947
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 CGCTTCAGCTGCTGAGTTGCACTTCCGNCCGGGTAACGACGCAACGAATGGAACNAACCG 762
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 AAAAACAAACACGTTGTCACATTTTTAGAAACGCGCTTTTAACCAAACCGGCCCGGGCCT 876
consensus_8753#0 ACCGGCCGGCCTGTGTTTGGACCGCTCCGGGCAGCTGCTGTACATTGCCGACACCAACAA 1007
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 TCGAATCCGG-TTGCGCTTACCTTCAAGCTGAACCTCTGCGAAGGGGCACATTTGCATTC 821
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 CTTTGTTTTG-GAACCGCGCTCCCGGNCACTCTTCTCTAACATTTGCCCCAACCAAGCAA 935
consensus_8753#0 CCACGAGCTGCTGGTGGCCAACCTTACCGACTGTACCATCCGTCCGCTGAAGTTGAATTT 1067
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 CCGAAAGAGTTGTCGT-------------------------------------------- 837
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 CCACAGACT--------------------------------------------------- 944
consensus_8753#0 CCGCGTGCCGGAAGAGCTGGACAGTGTGGCGGGCGAAGCGGAGCAAGGAGGTCGCCGTTC 1127
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 ------------------------------------------------------------
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 ------------------------------------------------------------
consensus_8753#0 CGGCACACTGACCCTGAAGCCTGCGCGTCCAATCACAATGCATCCCAACGCGGGTCAGAG 1187
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 ------------------------------------------------------------
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 ------------------------------------------------------------
consensus_8753#0 CTCCCTCCGGTTGACGTTTAATTTCACCTTCCCCGAGCAAACGACCAAGCTGACCGAGGG 1247
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 ------------------------------------------------------------
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 ------------------------------------------------------------
consensus_8753#0 CGCACCACAACAATGGTCCCTGGAGCTGCCGGCCGGTGGATGGAGTTGTGACAGTACCAA 1307
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 ------------------------------------------------------------
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 ------------------------------------------------------------
consensus_8753#0 GGGCACGATCGATACGAAAACGCTTCAGCTGCTGATTGCACTTCCGCCCGGGAACGACGC 1367
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 ------------------------------------------------------------
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 ------------------------------------------------------------
consensus_8753#0 AACGAATGGCAACGAACCGTCGAATCCGGTCGCGCTTACCTTCAAGCTGAACCTCTGCGA 1427
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 ------------------------------------------------------------
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 ------------------------------------------------------------
consensus_8753#0 AGGGGACATTTGCTTCCCGAAAAGNTTGTCGTGCTGCTGGAGGNGCAATACTCGGCGTCC 1487
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 ------------------------------------------------------------
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 ------------------------------------------------------------
consensus_8753#0 GAAGCGGGCCACCCAAATGTGGACCGTTACGATGCGCAGGAAACGTACGAGCTGCAGCTG 1547
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 ------------------------------------------------------------
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 ------------------------------------------------------------
consensus_8753#0 TCCCGCAAAACGGTAGCGCTGCAGCAGCCCTAAGTAAGCTGCTATTAAGCGCATCCGGCA 1607
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 ------------------------------------------------------------
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 ------------------------------------------------------------
consensus_8753#0 CAACGAACAAAAGCGCTCTTTTTAATGTTTTTACCTTCGAGTCGTAGGATACATCACGGG 1667
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 ------------------------------------------------------------
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 ------------------------------------------------------------
consensus_8753#0 ACGATGTAGTTGCATTTGTTATAGTCATTTAATTAGTAAGAGTTGGTGGCACATGCAGCA 1727
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 ------------------------------------------------------------
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 ------------------------------------------------------------
consensus_8753#0 GCATGTGTACCTTCCCTTGGGTGTTGCATCTATTGTGGTAGTTTTTTTGATTTCGTTAAA 1787
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 ------------------------------------------------------------
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 ------------------------------------------------------------
consensus_8753#0 CTTTTGATATCTTTTTTGCCTTCATCAATCATCATCTGCAGCTGCAGCTTTACGGCTGGA 1847
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 ------------------------------------------------------------
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 ------------------------------------------------------------
consensus_8753#0 TTTCAGGGAACACGAACACGATGAACTGCACCGCACAGTGTTTCTCGAACATGCAATCGA 1907
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 ------------------------------------------------------------
consensus_8753#3 ------------------------------------------------------------
consensus_8753#1 ------------------------------------------------------------
consensus_8753#0 CAATCTGATGCCTCAACGACTTGCGTTCGGATAGATTTTCAAACAATACAAAACCGCACT 1967
consensus_8753#4 ------------------------------------------------------------
consensus_8753#5 ------------------------------------------------------------
consensus_8753#2 ------------------------------
consensus_8753#3 ------------------------------
consensus_8753#1 ------------------------------
consensus_8753#0 GTCGACCAAATGGTGTCTAAATAAAAAAAG 1997
consensus_8753#4 ------------------------------
consensus_8753#5 ------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||