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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8765#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1242 fasta sequence
[CCGCTTCGATTTTCGTCTGACGTGGTCCGTGTACATCATCGCACTATCGGTGAATTCACTATATTTTCCCGTCGGCTGCCTATCCCTGTCCGTGCAATCGTTCTGTTGCAGCTCCCACGTCG-TCACACCGAGCACCCGGCTGCAGCATGAATCCTTTGGGATTTTTCACTCTGGCCGCCCTGGTGGTTGCCGCATTGGCCGCTACACCCGCCACACAGCGTACCGTGTCGAGCCACCTCACAGCACAGGACCAGGAGCGCTTTGCGAAGGTGTTCAGCGAGGGACTGAAGTCGAACGATCTGCAATCACTGTACTATGCGTCCGCGAATGTGGCACTTCCGGCCGGTGATGTTACCAGCACCTGCAAGCGATTGTTTACGCTGCACGGTGAATCGAAATTAAACGATTTCGAGAAAAACTTTTACCTGATCGGCGCACGCAAGAACTTCGGCTGCAAGGAAGCACTTCCGGCAAAGGTCGAAACGGCAGTGAAGGCAGCACTGGCCAAGGACGCTACCACGGCGCAGGAAATCTATTACAATTTCCATTCGGCCAAGCTGGCCGGTCTCGCCGTCGACGAGAAGGTGCGCACCACGCTGGGCAAGAACCTGCAGACCGTGCTGAAGAAGGACGATTCGCTCAACTCGCTCGGACACGCGTTCGCCGTGGCAGCCGAGCTCGGTACGGCCGGTTCCTTCGCGTACGATCGCATCGAGGAAGCGTTTGTGCAGGCCGATGAGGTCGATGGCAAGATGCTGCAGTTCGAAGGTGGCCTGAGCATTACGGCCCTCATCGTGAACGGTGGATTCAAGCTGGCCACGAGCCTCTCGAAACCGGCCCCGATCACGGCCGACCAGGCGGTCAAATTCGCCACCTACTTCCTGTCGCGTGCCTCCGTCCAGACGCCGAAGGGTGTTAGCGTGCTGCTGGAAGCGCTGAAGCTGTTGGCTTCGCAGAAAACCATCGCTCCGGTATGCGTTCGACTGGCCGGCAATGGCCAGCTGCTGCCCGAATCACCCGTACTGAGCGTGCGTGTGTGTGACCTGCTCGGTAAGCCGCTTTCGCCCGCACTGGCCGCCCTCTCGACGACGGTTGTGTCCCGCACGACAAACGATGCGCTCGTTTCGAAGGTAAACCTGGTGCCCAGCAAGGACGACGCGACTCTGTACACGTACAATCTGGAGTCGGCCTCGCCTA-CCCGCGGTCTCTACCGTGTGGACGTCGATGCCGCACCCTCCTACC]
[+] EMBL BM614098 [CCGCTTCGATTTTCGTCTGACGTGGTCCGTGTACATCATCGCACTATCGGTGAATTCACTATATTTTCCCGTCGGCTGCCTATCCCTGTCCGTGCAATCGTTCTGTTGCAGCTCCCACGTCG TCACACCGAGCACCCGGCTGCAGCATGAATCCTTTGGGATTTTTCACTCTGGCCGCCCTGGTGGTTGCCGCATTGGCCGCTACACCCGCCACACAGCGTACCGTGTCGAGCCACCTCACAGCACAGGACCAGGAGCGCTTTGCGAAGGTGTTCAGCGAGGGACTGAAGTCGAACGATCTGCAATCACTGTACTATGCGTCCGCGAATGTGGCACTTCCGGCCGGTGATGTTACCAGCACCTGCAAGCGATTGTTTACGCTGCACGGTGAATCGAAATTAAACGATTTCGAGAAAAACTTTTACCTGATCGGCGCACGCAAGAACTTCGGCTGCAAGGAAGCACTTCCGGCAAAGGTCGAAACGGCAG ]
[+] EMBL BM629910 [ ccgCGTCTGACGTGGTCCGTGTACATCATCGCACTATCGGTGAATTCACTATATTTTCCCGTCGGCTGCCTATCCCTGTCCGTGCAATCGTTCTGTTGCAGCTCCCACGTCG TCACACCGAGCACCCGGCTGCAGCATGAATCCTTTGGGATTTTTCACTCTGGCCGCCCTGGTGGTTGCCGCATTGGCCGCTACACCCGCCACACAGCGTACCGTGTCGAGCCACCTCACAGCACAGGACCAGGAGCGCTTTGCGAAGGTGTTCAGCGAGGGACTGAAGTCGAACGATCTGCAATCACTGTACTATGCGTCCGCGAATGTGGCACTTCCGGCCGGTGATGTTACCAGCACCTGCAAGCGATTGTTTACGCTGCACGGTGAATCGAAATTAAACGATTTCGAGAAAAACTTTTACCTGATCGGCGCACGCAAGAACTTCGGCTGCAAGGAAGCACTTCCGGCAAAGGTCGAAACGGCAGTGAAGGCAGCACTGGCCAAGGACGCTACCACGGCGCAGGAAATCTATTACAATTT ]
[+] EMBL BM580531 [ ccgCTGACGTGGTCCGTGTACATCATCGCACTATCGGAGAATTCACTATATTTTCCCGTCGGCTGCCTATCCCTGTCCGAGCAATCGTGCTGTTGCATCTCCCACGACGATCACACCGAGCACCCGGCTGCAGCATGAATCCTTTGGGATTTTTAACTCTGGCCGCCCTGGCGGGTGCCGCATTGGCCGCTACACCCGCCACACAGCGTA ]
[+] EMBL BM581228 [ ccgCGTGGTCCGTGTACATCATCGCACTATCGGTGAATTCACTATATTTTCCCGTCGGCTGCCTATCCCTGTCCGTGCAATCGTTCTGTTGCAGCTCCCACGTCG TCACACCGAGCACCCGGCTGCAGCATGAATCCTTTGGGATTTTTCACTCTGGCCGCCCTGGTGGTTGCCGCATTGGCCGCTACACCCGCCACACAGCGTACCGTGTCGAGCCACCTCACAGCACAGGACCAGGAGCGCTTTGCGAAGGTGTTCAGCGAGGGACTGAAGTCGAACGATCTGCAATCACTGTACTATGCGTCCGCGAATGTGGCACTTCCGGCCGGTGATGTTACCAGCACCTGCAAGCGATTGTTTACGCTGCACGGTGAATCGAAATTAAACGATTTCGAGAAAAACTTTTACCTGATCGGCGCACGCAAGAACTTCGGCTGCAAGGAAGCACTTCCGGCAAAGGTCGAAACGGCAGTGAAGGCAGCACTGGCCAAGGACGCTACCACGGCGCAGGAAATCTATTACAATTTCCATTCGGCCAAGCTGGCCGGTCTCGCCGTCGACGAGAAGGTGCGCACCACGCTGGGCAAGAACCTGCAGACCGTGCTGAAGAAGGACGATTCGCTCAACTCGCTCGGACACGCGTTCGCCGTGGCAGCCGAGCTCGGTACGGCCGGTTCCTTCGCGTACGATCGCATCGAG ]
[+] EMBL BM591495 [ ccgcccacgCGTCC GGTGGTTGCCGCATTGGCCGCTACACCCGCCACACAGCGTACCGTGTCGAGCCACCTCACAGCACAGGACCAGGAGCGCTTTGCGAAGGTGTTCAGCGAGGGACTGAAGTCGAACGATCT CAATCACTGTACTATGCGTCCGCGAATGTGGCACTTCCGGCCGGTGATGTTACCAGCACCTGCAAGCGATTGTTTACGCTGCACGGTGAATCGAAATTAAACGATTTCGAGAAAAACTTTTACCTGATCGGCGCACGCAAGAACTTCGGCTGCAAGGAAGCACTTCCGGCAAAGGTCGAAACGGCAGTGAAGGCAGCACTGGCCAAGGACGCTACCACGGCGCAGGAAATCTATTACAATTTCCATTCGGCCAAGCTGGCCGGTCTCGCCGTCGACGAGAAGGTGCGCACCACGCTGGGCAAGAACCTGCAGACCGTGCTGAAGAAGGACGATTCGCTCAACTCGCTCGGACACGCGTTCGCCGTGGCAGCCGAGCTCGGTACGGCCGGTTCCTTCGCGTACGATCGCATCG ]
[+] EMBL BX606692 [ GGACGCTACCACGGCGCAGGAAATCTATTACAATTTCCATTCGGCCAAGCTGGCCGGTCTCGCCGTCGACGAGAAGGTGCGCACCACGCTGGGCAAGAACCTGCAGACCGTGCTGAAGAAGGACGATTCGCTCAACTCGCTCGGACACGCGTTCGCCGTGGCAGCCGAGCTCGGTACGGCCGGTTCCTTCGCGTACGATCGCATCGAGGAAGCGTTTGTGCAGGCCGATGAGGTCGATGGCAAGATGCTGCAGTTCGAAGGTGGCCTGAGCATTACGGCCCTCATCGTGAACGGTGGATTCAAGCTGGCCACGAGCCTCTCGAAACCGGCCCCGATCACGGCCGACCAGGCGGTCAAATTCGCCACCTACTTCCTGTCGCGTGCCTCCGTCCAGACGCCGAAGGGTGTTAGCGTGCTGCTGGAAGCGCTGAAGCTGTTGGCTTCGCAGAAAACCATCGCTCCGGTATGCGTTCGACTGGCCGGCAATGGCCAGCTGCTGCCCGAATCACCCGTACTGAGCGTGCGTGTGTGTGACCTGCTCGGTAAGCCGCTTTCGCCCGCACTGGCCGCCCTCTCGACGACGGTTGTGTCCCGCACGACAAACGATGCGCTCGTTTCGAAGGTAAACCTGGTGCCCAGCAAGGACGACGCGACTCTGTACACGTACAATCTGGAGTCGGCCTCGCCTA CCCGCGGTCTCTACCGTGTGGACGTCGATGC ]
[+] EMBL BX622639 [ ACCACGCTGGGCAAGAACCTGCAGACCGTGCTGAAGAAGGACGATTCGCTCAACTCGCTCGGACACGCGTTCGCCGTGGCAGCCGAGCTCGGTACGGCCGGTTCCTTCGCGTACGATCGCATCGAGGAAGCGTTTGTGCAGGCCGATGAGGTCGATGGCAAGATGCTGCAGTTCGAAGGTGGCCTGAGCATTACGGCCCTCATCGTGAACGGTGGATTCAAGCTGGCCACGAGCCTCTCGAAACCGGCCCCGATCACGGCCGACCAGGCGGTCAAATTCGCCACCTACTTCCTGTCGCGTGCCTCCGTCCAGACGCCGAAGGGTGTTAGCGTGCTGCTGGAAGCGCTGAAGCTGTTGGCTTCGCAGAAAACCATCGCTCCGGTATGCGTTCGACTGGCCGGCAATGGCCAGCTGCTGCCCGAATCACCCGTACTGAGCGTGCGTGTGTGTGACCTGCTCGGTAAGCCGCTTTCGCCCGCACTGGCCGCCCTCTCGACGACGGTTGTGTCCCGCACGACAAACGATGCGCTCGTTTCGAAGGTAAACCTGGTGCCCAGCAAGGACGACGCGACTCTGTACACGTACAATCTGAAGTCGGCCTCGCCTACCCCGCGGTCTCTACCGTGTGGACGTCGATGCCGCACCCTCCTACC]
[+] EMBL BM628350 [ CGGACACGCGTTCGCCGTGGCAGCCGAGCTCGGTACGGGCGGTTCCTTCGCGTACGATCGCATCGAGGAAGCGTTTGTGCAGGCCGATGAGGTCGATGGCAAGATGCTGCAGTTCG ]
[+] EMBL AGA285441 [ GCATCGAGGAAGCGTTTGTGCAGGCCGATGAGGTCGATGGCAAGATGCTGCAGTTCGAAGGTGGCCTGAGCATTACGGCCCTCATCGTGAACGGTGGATTCAAGCTGGCCACGAGCCTCTCGAAACCGGCCCCGATCACGGCCGACCAGGCGGTCAAATTCGCCACCTACTTCCTGTCGCGTGCCTCCGTCCAGACGCCGAAGGGTGTTAGCGTGCTGCTGGAAGCGCTGAAGCTGTTGGCTTCGCAGAAAACCATCGCTCCGGTATGCGTTCGACTGGCCGGCAATGGCCAGCTGCTGCCCGAATCACCCGTACTGAGCGTGCGTGTGTGTGACCTGCTCGGTAAGCCGCTTTCGCCCGCACTGGCCGCCCTCTCGACGACGGTTGTGTCCCGCACGACAAACGAT ]
consensusID : consensus_8765#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 628 fasta sequence
[CGACCCACGCGTCCG-CGCACTATCGGTGAATTCACTATATTTTCCCGTCGGCTGCCTATCCCTGTCCGTGCAATCGTTCTGTTGCAGCTCCCACGTCGTCACACCGAGCACCCGGCTGCAGCATGAATCCTTTGGGATTTTTCACTCTGGCCGCCCTGGTGGTTGCCGCATTGGCCGCTACACCCGCCACACAGCGTACCGTGTCGAGCCACCTCACAGCACAGGACCAGGAGCGCTTTGCGAAGGTGTTCAGCGAGGGACTGAAGTCGAACGATCTGCAATCACTGTACTATGCGTCCGCGAATGTGGCACTTCCGGCCGGTGATGTTACCAGCACCTGCAAGCGATTGTTTACGCTGCACGGTGAATCGAAATTAAACGATTTCGAGAAAAACTTTTACCTGATCGGCGCACGCAAGAACTTCGGCTGCAAGGAAGCACTTCCGGCAAAGGTCGAAACGGCAGTGAAGGCAGCACTGGCCAAGGACGCTA-CCACGGCGCAGGAAATCTATTACAATTTCCATTCGGCCAAGCTGG-CCGGTCTCGCCGTCGACGAGAAGGTGCGCACCACGCTGGGCAAGAACCTGCAGACCGTGCTGAAGAAGGACGATTCGCTCAACTCGCTCGG]
[+] EMBL BM586827 [CGACCCACGCGTCCG CGCACTATCGGTGAATTCACTATATTTTCCCGTCGGCTGCCTATCCCTGTCCGTGCAATCGTTCTGTTGCAGCTCCCACGTCGTCACACCGAGCACCCGGCTGCAGCATGAATCCTTTGGGATTTTTCACTCTGGCCGCCCTGGTGGTTGCCGCATTGGCCGCTACACCCGCCACACAGCGTACCGTGTCGAGCCACCTCACAGCACAGGACCAGGAGCGCTTTGCGAAGGTGTTCAGCGAGGGACTGAAGTCGAACGATCTGCAATCACTGTACTATGCGTCCGCGAATGTGGCACTTCCGGCCGGTGATGTTACCAGCACCTGCAAGCGATTGTTTACGCTGCACGGTGAATCGAAATTAAACGATTTCGAGAAAAACTTTTACCTGATCGGCGCACGCAAGAACTTCGGCTGCAAGGAAGCACTTCCGGCAAAGGTCGAAACGGCAGTGAAGGCAGCACTGGCCAAGGACGCTA CCACGGCGCAGGAAATCTATTACAATTTCCATTCGGCCAAGCTGG CCGGTCTCGCCGTCGACGAGAAGGTGCGCACCACGCTGGGCAAGAACCTGCAGACCGTGCTGAAGAAGGACGATTCGCTCAACTCGCTCGG]
[+] EMBL BM615337 [ccgcggACGCGTGGGTCGCACTATCGGTGAATTCACTATATTTTCCCGTCGGCTGCCTATCCCTGTCCGTGCAATCGTTCTGTTGCAGCTCCCACGTCGTCACACCGAGCACCCGGCTGCAGCATGAATCCTTTGGGATTTTTAACTCTGGCCGCCCTGGTGGTTGCCGCATTGGCCGCTACACCCGCCACACAGCGTACCGTGTCGAGCCACCTCACAGCACAGGACCAGGAGCGCTTTGCGAAGGTGTTCAGCGAGGGACTGAAGTCGAACGATCTGCAATCACTGTACTATGCGTCCGCGAATGTGGCACTTCCGGCCGGTGATGTTACCAGCACCTGCAAGCGATTGTTTACGCTGCACGGTGAATCGAAATTAAACGATTTCGAGAAAAACTTTTACCTGATCGGCGCGCGCAAGAACTTCGGCTGCAAGGAAGCACTTCCGGCAAAGGTCGAAACGGCAGTGAAGGCAGCACTGGCCAAGGACGCTA CCACGGCGCAGGAAATCTATTACAATTTCCATTCGGCCAAGCTGG CCGGTCTCGCCGTCGACGAGAAGGTGCGCACCACGCTGGGCAAGAACCTGCAGACCGTGCTGAAGAAGGACGATTCGCTCAACTCGCT ]
[+] EMBL BM598074 [ ccgCTGTTGCAGCTCCCACGTCGTCACACCGAGCACCCGGCTGCAGCATGAATCCTTTGGGATTTTTCACTCTGGCCGCCCTGGTGGTTGCCGCATTGGCCGCTACACCCGCCACACAGCGTACCGTGTCGAGCCACCTCACAGCACAGGACCAGGAGCGCTTTGCGAAGGTGTTCAGCGAGGGACTGAAGTCGAACGATCTGCAATCACTGTACTATGCGTCCGCGAATGTGGCACTTCCGGCCGGTGATGTTACCAGCACCTGCAAGCGATTGTTTACGCTGCACGGTGAATCGAAATTAAACGATTTCGAGAAAAACTTTTACCTGATCGGCGCACGCAAGAACTTCGGCTGCAAGGAAGCACTTCCGGCAAAGGTCGAAACGGCAGTGAAGGCAGCACTGGCCAAGGACGCTACCCACGGCGCAGGAAATCTATTACAATTTCCATTCGGCCAAGCTGGCCCGGTCTCGCCGTCGACGAGAAGGTGCGCACCACGCTGGGCAAGAACCTGCAGACCGTGCTGAAGAAGGACGATTCG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8765#0 CCGCTTCGATTTTCGTCTGACGTGGTCCGTGTACATCATCGCACTATCGGTGAATTCACT 60
consensus_8765#1 ----------------------CGACCCACG--CGTCCGCGCACTATCGGTGAATTCACT 36
* ** * * ** *********************
consensus_8765#0 ATATTTTCCCGTCGGCTGCCTATCCCTGTCCGTGCAATCGTTCTGTTGCAGCTCCCACGT 120
consensus_8765#1 ATATTTTCCCGTCGGCTGCCTATCCCTGTCCGTGCAATCGTTCTGTTGCAGCTCCCACGT 96
************************************************************
consensus_8765#0 CGTCACACCGAGCACCCGGCTGCAGCATGAATCCTTTGGGATTTTTCACTCTGGCCGCCC 180
consensus_8765#1 CGTCACACCGAGCACCCGGCTGCAGCATGAATCCTTTGGGATTTTTCACTCTGGCCGCCC 156
************************************************************
consensus_8765#0 TGGTGGTTGCCGCATTGGCCGCTACACCCGCCACACAGCGTACCGTGTCGAGCCACCTCA 240
consensus_8765#1 TGGTGGTTGCCGCATTGGCCGCTACACCCGCCACACAGCGTACCGTGTCGAGCCACCTCA 216
************************************************************
consensus_8765#0 CAGCACAGGACCAGGAGCGCTTTGCGAAGGTGTTCAGCGAGGGACTGAAGTCGAACGATC 300
consensus_8765#1 CAGCACAGGACCAGGAGCGCTTTGCGAAGGTGTTCAGCGAGGGACTGAAGTCGAACGATC 276
************************************************************
consensus_8765#0 TGCAATCACTGTACTATGCGTCCGCGAATGTGGCACTTCCGGCCGGTGATGTTACCAGCA 360
consensus_8765#1 TGCAATCACTGTACTATGCGTCCGCGAATGTGGCACTTCCGGCCGGTGATGTTACCAGCA 336
************************************************************
consensus_8765#0 CCTGCAAGCGATTGTTTACGCTGCACGGTGAATCGAAATTAAACGATTTCGAGAAAAACT 420
consensus_8765#1 CCTGCAAGCGATTGTTTACGCTGCACGGTGAATCGAAATTAAACGATTTCGAGAAAAACT 396
************************************************************
consensus_8765#0 TTTACCTGATCGGCGCACGCAAGAACTTCGGCTGCAAGGAAGCACTTCCGGCAAAGGTCG 480
consensus_8765#1 TTTACCTGATCGGCGCACGCAAGAACTTCGGCTGCAAGGAAGCACTTCCGGCAAAGGTCG 456
************************************************************
consensus_8765#0 AAACGGCAGTGAAGGCAGCACTGGCCAAGGACGCTACCACGGCGCAGGAAATCTATTACA 540
consensus_8765#1 AAACGGCAGTGAAGGCAGCACTGGCCAAGGACGCTACCACGGCGCAGGAAATCTATTACA 516
************************************************************
consensus_8765#0 ATTTCCATTCGGCCAAGCTGGCCGGTCTCGCCGTCGACGAGAAGGTGCGCACCACGCTGG 600
consensus_8765#1 ATTTCCATTCGGCCAAGCTGGCCGGTCTCGCCGTCGACGAGAAGGTGCGCACCACGCTGG 576
************************************************************
consensus_8765#0 GCAAGAACCTGCAGACCGTGCTGAAGAAGGACGATTCGCTCAACTCGCTCGGACACGCGT 660
consensus_8765#1 GCAAGAACCTGCAGACCGTGCTGAAGAAGGACGATTCGCTCAACTCGCTCGG-------- 628
****************************************************
consensus_8765#0 TCGCCGTGGCAGCCGAGCTCGGTACGGCCGGTTCCTTCGCGTACGATCGCATCGAGGAAG 720
consensus_8765#1 ------------------------------------------------------------
consensus_8765#0 CGTTTGTGCAGGCCGATGAGGTCGATGGCAAGATGCTGCAGTTCGAAGGTGGCCTGAGCA 780
consensus_8765#1 ------------------------------------------------------------
consensus_8765#0 TTACGGCCCTCATCGTGAACGGTGGATTCAAGCTGGCCACGAGCCTCTCGAAACCGGCCC 840
consensus_8765#1 ------------------------------------------------------------
consensus_8765#0 CGATCACGGCCGACCAGGCGGTCAAATTCGCCACCTACTTCCTGTCGCGTGCCTCCGTCC 900
consensus_8765#1 ------------------------------------------------------------
consensus_8765#0 AGACGCCGAAGGGTGTTAGCGTGCTGCTGGAAGCGCTGAAGCTGTTGGCTTCGCAGAAAA 960
consensus_8765#1 ------------------------------------------------------------
consensus_8765#0 CCATCGCTCCGGTATGCGTTCGACTGGCCGGCAATGGCCAGCTGCTGCCCGAATCACCCG 1020
consensus_8765#1 ------------------------------------------------------------
consensus_8765#0 TACTGAGCGTGCGTGTGTGTGACCTGCTCGGTAAGCCGCTTTCGCCCGCACTGGCCGCCC 1080
consensus_8765#1 ------------------------------------------------------------
consensus_8765#0 TCTCGACGACGGTTGTGTCCCGCACGACAAACGATGCGCTCGTTTCGAAGGTAAACCTGG 1140
consensus_8765#1 ------------------------------------------------------------
consensus_8765#0 TGCCCAGCAAGGACGACGCGACTCTGTACACGTACAATCTGGAGTCGGCCTCGCCTACCC 1200
consensus_8765#1 ------------------------------------------------------------
consensus_8765#0 GCGGTCTCTACCGTGTGGACGTCGATGCCGCACCCTCCTACC 1242
consensus_8765#1 ------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||