Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8769 cluster # 8769       Sequences # 12       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8769#0 length = 1404 sequences # 7  
consensus_8769#1 length = 1230 sequences # 3  
consensus_8769#2 length = 711 sequences # 2  

consensusID : consensus_8769#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1404
fasta sequence
                              [ATCCGCCCACGCGTCCGCAACGCCGCCCACACCTGCCCCACGCACTCCGAGCAAAACTTTTAGTAATGTTACTCCCAAGAAAGTATCATCAGCCCCCTCTCGCATTCCGCTCGGAAACCGGAGTAAAAAAATACCTGCTAAGTAGCAAATACGCAAATGTTGACGTAATATTTACTCAAGAGCGGCAATGATGTCCCGCGCATCCCTGCCGACATAACGGAGATTGCAGCACATTGAGCGTATTATGTTTTAAGCCAAAGGAAGTGTATA-TTACAAACCCAACTAACTACCTGTAACCGGAGGCGGTCGAACAGTGGTACAGCAGCGTGCTGATATATGATAGTGTTGGAAAGCTG-GTGTATAGAATGGATTTGGGATGTGTTAAATACTTTACACTCCAAACATAAAGCGCAATGATCGCACTGTTCTAGGTATGCTGCACGCACCAAAGACAGACAGATTCATACACGCTTCACACTTGTTTGGTGTTTATAGTATCAAAATTACCATTTGATGATTCGTTCCAACACCATATGAATGCATTATAAATACTTGTGTATACACATTCGTCTAATGAATGTCGCATGCGGGCATTAATCATTGCATTCATATCTGGCATCCAAAAAGCGTTGCGAATAATTACATGGGATAAAGAAAACTGTGACTGAATTACAGAGAATTGTGTATAGATTAGCTGAGGTATGGTTTTCTGTGTAATGGTCAAAAAGGCGTCGACCCGCCTCTCTTTCCGTTACGGCAACACCGTTGCAATTGCGCTGCTCTGAAAATAGCACGCATACAATCGTTTGCTCTTGTTAAGATGAAAGCTTTAGGC-GTTGTTTTGTCGATTGAACTGCTTTACCTTTCGCGGGAAAAGTACTCATCGAGCGGAAAACAATCCCTGTAGGTGTACGTAAAGGA-----TTTTTTGTATTTTAATTTTTGCAAACCATGGCAGGCCGGAGTGAATATTGGGAGTGACAGTTGTAGGGAAGGGATAGTGACCCTGGATAAAGTACATAAAGTCCTTTTAGCGGCAC---TTATTATTATTATTATTATTGCTTCTTAGTCAGCTTGCTTCATTAATAGCTATATAAAATGCATAAACTGATTAAAC---AAAAAAATACTCACCGCTCTGTAATCAATGCTGTAATAATCCAGGTATATTCATGAACAGTAACAGAAGAGAGCTAGGAAAGTTTGAGGAGTGTTAAGGAGCAGCGAGTGTTAAAGATGGATTAGATTCGTTTAGTATTACAGCGTGTACAGCCAATAGAAAGTAGGAAAGATGCATATTTTTGGTATTATTATTTGTTTTCCTAAGGNCAACAACTATTTTGCCTCGTTCGGNTCACCTAGCTCATTAAAGCAGACCAAAAACTAAGTCATTAGATTAAAGCTTCAAAA]

[+] EMBL BM582221             [  CCGCCCACGCGTCCGCAACGCCGCCCACACCTGCCCCACGCACTCCGAGCAAAACTTTTAGTAATGTTACTCCCAAGAAAGTATCATCAGCCCCCTCTCGCATTCCGCTCGGAAACCGGAGTAAAAAAATACCTGCTAAGTAGCAAATACGCAAATGTTGACGTAATATTTACTCAAGAGCGGCAATGATGTCCCGCGCATCCCTGCCGACATAACGGAGATTGCAGCACATTGAGCGTATTATGTTTTAAGCCAAAGGAAGTGTATA TTACAAACCCAACTAACTACCTGTAACCGGAGGCGGTCGAACAGTGGTACAGCAGCGTGCTGATATATGATAGTGTTGGAAAGCTG GTGTATAGAATGGATTTGGGATGTGTTAAATACTTTACACTCCAAACATAAAGCGCAATGATCGCACTGTTCTAGGTATGCTGCACGCACCAAAGACAGACAGATTCATACACGCTTCACACTTGTTTGGTGTTTATAGTATCAAAATTACCATTTGATGATTCGTTCCAACACCATATGAATGCATTATAAATACTTGTGTATACACATTCGTCTAATGAATGTCGCATGCGGGCATTAATCATTGCATTCATATCTGGCATCCAAAAAGCGTTGCGAATAATTACATGGGATAAAGAAAACTGTGACTGAATTACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS08SCL             [atgcatCCCCG GT CACAACGCCGCCCACACCTGCCCCACGCACTCCGAGCAAAACTTTTAGTAATGTTACTCCCAAGAAAGTATCATCAGCCCCCTCTCGCATTCCGCTCGGAAACCGGAGTAAAAAAATACCTGCTAAGTAGCAAATACGCAAATGTTGACGTAATATTTACTCAAGAGCGGCAATGATGTCCCGCGCATCCCTGCCGACATAACGGAGATTGCAGCACATTGAGCGTATTATGTTTTAAGCCAAAGGAAGTGTATAGTTACAAACCCAACTAACTACCTGTAACCGGGAGCGGTCGAACAGTGGTACAGCAGCGTGCTGATATATGATAGTGTTGGAAAGCTGCGTGTATAGAATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM588050             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ccgATTCATATCTGGCATCCAAAAAGCGTTGCGAATAATTACATGGGATAAAGAAAACTGTGACTGAATTACAGAGAATTGTGTATAGATTAGCTGAGGTATGGTTTTCTGTGTAATGGTCAAAAAGGCGTCGACCCGCCTCTCTTTCCGTTACGGCAACACCGTTGCAATTGCGCTGCTCTGAAAATAGCACGCATACAATCGTTTGCTCTTGTTAAGATGAAAGCTTTAGGC GTTGTTTTGTCGATTGAACTGCTTTACCTTTCGCGGGAAAAGTACTCATCGAGCGGAAAACAATCCCTGTAGGTGTACGTAAAAGATGTTTTTTTTTGTATTTTAATTTTTGCAAACCATGGCAGGCCGGAGTGAATATTGGGAGTGACAGTTGTAGGGAAGGGATAGTGACCCTGGATAAAGTACATAAAGTCCTTTTAGCGGCAC      TTATTATTATTATTATTGCTTCTTAGTCAGCTTGCTTCATTAATAGCTATATAAAATGCATAAACTGATTAAACA  AAAAAAATACTCACCGCTCTGTAATCAATGCTGTAATAATCCAGGTATATTCATGAACAGTAACAGAAGAGAGCTAGGAAAGTTTGAGG                                                                                                                                                                                                         ]
[+] EMBL CNS08KS4             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 aacaaCTGGCATCCAAAAAGCGTTGCGAATAATTACATGGGATAAAGAAAACTGTGACTGAATTACAGAGAATTGTGTATAGATTAGCTGAGGTATGGTTTTCTGTGTAATGGTCAAAAAGGCGTCGACCCGCCTCTCTTTCCGTTACGGCAACACCGTTGCAATTGCGCTGCTCT       GCACGCATACAATCGTTTGCTCTTGTTAAGATGAAAGCTTTAGGCTGTTGTTTTGTCGATTGAACTGCTTTACCTTTCGCGGGAAAAGTACTCATCGAGCGGAAAACAATCCCTGTAGGTGTACGTAAAGGA     TTTTTTGTATTTTAATTTTTGCAAACCATGGCAGGCCGGAGTGAATATTGGGAGTGACAGTTGTTGGGAAGGGATATAAACCCTGGATAAAGTACATAAAGTCCTTTTAGCGGCAC   TTATTATTATTAT                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX625083             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TATAGATTAGCTGAGGTATGGTTTTCTGTGTAATGGTCAAAAAGGCGTCGACCCGCCTCTCTTTCCGTTACGGCAACACCGTTGCAATTGCGCTGCTCTGAAAATAGCACGCATACAATCGTTTGCTCTTGTTAAGATGAAAGCTTTAGGC GTTGTTTTGTCGATTGAACTGCTTTACCTTTCGCGGGAAAAGTACTCATCGAGCGGAAAACAATCCCTGTAGGTGTACGTAAAGGA     TTTTTTGTATTTTAATTTTTGCAAACCATGGCAGGCCGGCGTGAATATTGGGAGTGACAGTTGTAGGGAAGGGATAGTGACCCTGGATAAAGTACATAAAGTCCTTTTAGCGGCACTTATTATTATTATTATTATTATTGCTTCTTAGTCAGCTTGCTTCAATAATAGCTATATAAAATGCATAAACTGATTAAAC   AAAAAAATACTCACCGCTCTGTAATCAATGCTGTAATAATCCAGGTATATTCATGAACAGTAACAGAAGAGAGCTAGGAAAGTTTGAGGAGTGTTAAGGAGCAGCGAGTGTTAAAGATGGATTAGATTCGTTTAGTATTACAGCGTGTACAGCCAATAGAAAGTAGGAAAGATGCATATTTTTGGTATTATTATTTGTTTTCCTAAGGNCAACAACTATTTTGCCTCGTTCGGNTCACCTAGCTCATTAAAGCAGACCAAAAACTAAGTCATTAGATTAAAGCTTCAAAA]
[-] EMBL CNS08SCM             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   gctctGCACGCATACAATCGTTTGCTCTTGTTAAGATGAAAGCTTTAGGC GTTGTTTTGTCGATTGAACTGCTTTTTTTTTCGCGGGAAAAGTACTCATCGAGCGGAAAACAATCCCTGTAGGTGTACGTAAAGGA     TTTTTTGTATTTTAATTTTTGCAAACCATGGCAGGCCGGAGTGAATATTGGGAGTGACAGTTGTTGGGAAGGGATATTGACCCTGGATAAAGAACATAAAGTCCTTTTAGCGGTTT   TTATTATTATTATTATTATTGCTTCTTAGTCAGCTTGCTTCATTAATAGCTATATAAAATGCATAAACTGATTAAACAAAAAAAAAATACTCACCGCTCTGTAATCAATGCTGTAATAATCCAGGTATATTCATGAACAGTAACAGAAGAGAGCTAGGAAAGTTTGAGGAGTGTTAAGGAGCAGCGAGTGTTAAAGATGGATTAGATTCGTTTAGTATTACAGCGTGTACAGCCAATAGAAAGTAGGAAAGATGCATATTTTTGGTATTATTATTTGTTTTCCTAAGGCCAACAACTATTTTGCCTCGTTCGGTTCACCTAGCTCATTAAAGCA                                    ]
[+] EMBL BX616437             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGCAGGCCGGCGGGAATATTGGGAGTGACAGTCGTAGGGAAGGGATAGTGACCCTGGATAAAGTACATAAAGTCCTCCCAGCGGCAC   TCATTATTATTATTA                                                                                                                                                                                                                                                                                                                                                                   ]


>consensus_8769#0 ATCCGCCCACGCGTCCGCAACGCCGCCCACACCTGCCCCACGCACTCCGAGCAAAACTTT TAGTAATGTTACTCCCAAGAAAGTATCATCAGCCCCCTCTCGCATTCCGCTCGGAAACCG GAGTAAAAAAATACCTGCTAAGTAGCAAATACGCAAATGTTGACGTAATATTTACTCAAG AGCGGCAATGATGTCCCGCGCATCCCTGCCGACATAACGGAGATTGCAGCACATTGAGCG TATTATGTTTTAAGCCAAAGGAAGTGTATATTACAAACCCAACTAACTACCTGTAACCGG AGGCGGTCGAACAGTGGTACAGCAGCGTGCTGATATATGATAGTGTTGGAAAGCTGGTGT ATAGAATGGATTTGGGATGTGTTAAATACTTTACACTCCAAACATAAAGCGCAATGATCG CACTGTTCTAGGTATGCTGCACGCACCAAAGACAGACAGATTCATACACGCTTCACACTT GTTTGGTGTTTATAGTATCAAAATTACCATTTGATGATTCGTTCCAACACCATATGAATG CATTATAAATACTTGTGTATACACATTCGTCTAATGAATGTCGCATGCGGGCATTAATCA TTGCATTCATATCTGGCATCCAAAAAGCGTTGCGAATAATTACATGGGATAAAGAAAACT GTGACTGAATTACAGAGAATTGTGTATAGATTAGCTGAGGTATGGTTTTCTGTGTAATGG TCAAAAAGGCGTCGACCCGCCTCTCTTTCCGTTACGGCAACACCGTTGCAATTGCGCTGC TCTGAAAATAGCACGCATACAATCGTTTGCTCTTGTTAAGATGAAAGCTTTAGGCGTTGT TTTGTCGATTGAACTGCTTTACCTTTCGCGGGAAAAGTACTCATCGAGCGGAAAACAATC CCTGTAGGTGTACGTAAAGGATTTTTTGTATTTTAATTTTTGCAAACCATGGCAGGCCGG AGTGAATATTGGGAGTGACAGTTGTAGGGAAGGGATAGTGACCCTGGATAAAGTACATAA AGTCCTTTTAGCGGCACTTATTATTATTATTATTATTGCTTCTTAGTCAGCTTGCTTCAT TAATAGCTATATAAAATGCATAAACTGATTAAACAAAAAAATACTCACCGCTCTGTAATC AATGCTGTAATAATCCAGGTATATTCATGAACAGTAACAGAAGAGAGCTAGGAAAGTTTG AGGAGTGTTAAGGAGCAGCGAGTGTTAAAGATGGATTAGATTCGTTTAGTATTACAGCGT GTACAGCCAATAGAAAGTAGGAAAGATGCATATTTTTGGTATTATTATTTGTTTTCCTAA GGNCAACAACTATTTTGCCTCGTTCGGNTCACCTAGCTCATTAAAGCAGACCAAAAACTA AGTCATTAGATTAAAGCTTCAAAA



consensusID : consensus_8769#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1230
fasta sequence
                              [ATCGNCCGAGGCTTATTATTATTATTATTATTATGCTTCTTAGTCAGCTGCTTCAATAATAGCTATATAAAATGCATAAACTGATTAAACAAAAAAATACTCACCGCTCTGTAATCAATGCTGTAATAATCCAGGTATATTCATGAACAGTAACAGAAGAGAGCTAGGAAAGTTTGAGGAGTGTTAAGGAGCAGCGAGTGTTAAAGATGGATTAGATTCGTTTAGTATTACAGCGTGTACAGCCAATAGAAAGTAGGAAAGATGCATATTTTTGGTATTATTATTTGTTTTCCTAAGGCCAACAACTATTTTACCTCGTTCGGTTCACCTAGCTCATTAAAGCAGACCAAAAACTAAGTCATTAGATTAAAGCTTCAAAAGAATTACATTTTATTCCTAGT-CTTTTCCCCCCTTTCTAT-CGATATGAGTTTCTGTGCGTCTCTATCTAAAAGCACGTATATAAGCTGATCG--TTTGCT-GCATGCAAAACAAATCTTTCAAATCTTTTTCTCTCTCTCGCTCAATCGAAGTATGAAACAATATTATTCAATTTTAAACAAGTCTATTGTGAATGCGACCTTCAGTGGAAACACAAATGTTCATTACCAAGCACACNCTACTATTATATGGAGTCAAAGCTTTTTTCCTACATTTAGCTTCACCAGGTATTGTTCACCATGAACACGGAATGTACACATCTGGCCAGNCTACCACCACANAACACCAGAGCTTTAACANAACTCAATGTAACTAAAGAAACCTTAGNGCTACACAAACCCAACAAAACTTCCTGCAGGCCCACTGCTTACTGGCCACNACACTTACTTGGCTTTGGCCNCTTGAACCGGGAATGCCTTCCTACCNCGGCAATAACACAGCAACACAGGTAGGTCACGAATNGCCCTACNCTCAACACTACGATCCCACAACCAACAAGCGACCTCACANGGGGNANCCACAAAAGCGCCAAAAACGCAGCCGGTAACGGCGTACCCCGACACGAAGGAACTTCCCACGANCCCCCGCCTACACGACGGAANCACATCCGACACAACATCACAGCANCCCGCACNGGCTACCCCCCNGCANTCCCACAANACCNCAACTAAAACCGATCCCCCCCTNATCCGGNGNGCAGCAGCGACCGACGAACGCCCAGGGCCCCCNCCCACGCCGCGAGANCACCACACNAACCCACCCACACACCNCCACACTCTCCNACACCCCCAACA]

[+] EMBL AL931171             [ATCGNCCGAGGCTTATTATTATTATTATTATTATGCTTCTTAGTCAGCTGCTTCAATAATAGCTATATAAAATGCATAAACTGATTAAACAAAAAAATACTCACCGCTCTGTAATCAATGCTGTAATAATCCAGGTATATTCATGAACAGTAACAGAAGAGAGCTAGGAAAGTTTGAGGAGTGTTAAGGAGCAGCGAGTGTTAAAGATGGATTAGATTCGTTTAGTATTACAGCGTGTACAGCCAATAGAAAGTAGGAAAGATGCATATTTTTGGTATTATTATTTGTTTTCCTAAGGCCAACAACTATTTTGCCTCGTTCGGTTCACCTAGCTCATTAAAGCAGACCAAAAACTAAGTCATTAGATTAAAGCTTCAAAAGAATTACATTTTATTCCTAGT CTTTTCCCCCCTTTCTAT CGATATGAGTTTCTGTGCGTCTCTATCTAAAAGCACGTATATAAGCTGATCG  TTTGCT GCATGCAAAACAAATCTTTCAAATCTTTTTCTCTCTCTCGCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CNS08KS5             [                                                                                                                                                              GAGAGCTAGGAAAGTTTGAGGAGTGTTAAGGAGCAGCGAGTGTTAAAGATGGATTAGATTCGTTTAGTATTACAGCGTGTACAGCCAATAGAAAATAGGAAAAATGAATATTTTTGGTATTATTATTTGTTTTCCTAAGGCCAACAACTATTTTACCTCGTTCGGTTCACCTAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AL695893             [                                                                                                                                                                                                                                                                                                               gccaggTTTAGCTCGTTCGGTTCA CTAGCTCATTAATGCAGACCAAAAACTAAGTCATTAGATTAAAGCTTCAAAAGAATTACATTTTATTCCTAGTACTTTTCCCCCCTTTCTATACGATATGAGTTTCTGTGCGTCTCTATCTAAAAGCACGTATATAAGCTGATCGTATTTGCTAGCATGCAAAACAAATCTTTCAAATCTTTTTCTCTCTCTCGCTCAATCGAAGTATGAAACAATATTATTCAATTTTAAACAAGTCTATTGTGAATGCGACCTTCAGTGGAAACACAAATGTTCATTACCAAGCACACNCTACTATTATATGGAGTCAAAGCTTTTTTCCTACATTTAGCTTCACCAGGTATTGTTCACCATGAACACGGAATGTACACATCTGGCCAGNCTACCACCACANAACACCAGAGCTTTAACANAACTCAATGTAACTAAAGAAACCTTAGNGCTACACAAACCCAACAAAACTTCCTGCAGGCCCACTGCTTACTGGCCACNACACTTACTTGGCTTTGGCCNCTTGAACCGGGAATGCCTTCCTACCNCGGCAATAACACAGCAACACAGGTAGGTCACGAATNGCCCTACNCTCAACACTACGATCCCACAACCAACAAGCGACCTCACANGGGGNANCCACAAAAGCGCCAAAAACGCAGCCGGTAACGGCGTACCCCGACACGAAGGAACTTCCCACGANCCCCCGCCTACACGACGGAANCACATCCGACACAACATCACAGCANCCCGCACNGGCTACCCCCCNGCANTCCCACAANACCNCAACTAAAACCGATCCCCCCCTNATCCGGNGNGCAGCAGCGACCGACGAACGCCCAGGGCCCCCNCCCACGCCGCGAGANCACCACACNAACCCACCCACACACCNCCACACTCTCCNACACCCCCAACA]


>consensus_8769#1 ATCGNCCGAGGCTTATTATTATTATTATTATTATGCTTCTTAGTCAGCTGCTTCAATAAT AGCTATATAAAATGCATAAACTGATTAAACAAAAAAATACTCACCGCTCTGTAATCAATG CTGTAATAATCCAGGTATATTCATGAACAGTAACAGAAGAGAGCTAGGAAAGTTTGAGGA GTGTTAAGGAGCAGCGAGTGTTAAAGATGGATTAGATTCGTTTAGTATTACAGCGTGTAC AGCCAATAGAAAGTAGGAAAGATGCATATTTTTGGTATTATTATTTGTTTTCCTAAGGCC AACAACTATTTTACCTCGTTCGGTTCACCTAGCTCATTAAAGCAGACCAAAAACTAAGTC ATTAGATTAAAGCTTCAAAAGAATTACATTTTATTCCTAGTCTTTTCCCCCCTTTCTATC GATATGAGTTTCTGTGCGTCTCTATCTAAAAGCACGTATATAAGCTGATCGTTTGCTGCA TGCAAAACAAATCTTTCAAATCTTTTTCTCTCTCTCGCTCAATCGAAGTATGAAACAATA TTATTCAATTTTAAACAAGTCTATTGTGAATGCGACCTTCAGTGGAAACACAAATGTTCA TTACCAAGCACACNCTACTATTATATGGAGTCAAAGCTTTTTTCCTACATTTAGCTTCAC CAGGTATTGTTCACCATGAACACGGAATGTACACATCTGGCCAGNCTACCACCACANAAC ACCAGAGCTTTAACANAACTCAATGTAACTAAAGAAACCTTAGNGCTACACAAACCCAAC AAAACTTCCTGCAGGCCCACTGCTTACTGGCCACNACACTTACTTGGCTTTGGCCNCTTG AACCGGGAATGCCTTCCTACCNCGGCAATAACACAGCAACACAGGTAGGTCACGAATNGC CCTACNCTCAACACTACGATCCCACAACCAACAAGCGACCTCACANGGGGNANCCACAAA AGCGCCAAAAACGCAGCCGGTAACGGCGTACCCCGACACGAAGGAACTTCCCACGANCCC CCGCCTACACGACGGAANCACATCCGACACAACATCACAGCANCCCGCACNGGCTACCCC CCNGCANTCCCACAANACCNCAACTAAAACCGATCCCCCCCTNATCCGGNGNGCAGCAGC GACCGACGAACGCCCAGGGCCCCCNCCCACGCCGCGAGANCACCACACNAACCCACCCAC ACACCNCCACACTCTCCNACACCCCCAACA



consensusID : consensus_8769#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 711
fasta sequence
                              [GATATGAGTTTCTGTGCGTCTCTATCTAAAAGCACGTATATAAGCTGATCGTTTTGCTGCATGCAAAACAAATCTTTCAAATCTTTTTCTCTCTCTCGCTCAATCGAAGTATGAAACAATATTATTAATTTTAAACAAGTCTATTTGTGAATGCGACCCTTCAGTGGAAACAAAATGTTCATTACCAACACACCTACTTTTTGGAGTAAAGCTTTTTCCTACATTTACCTTCACCAGGTATTGTTACCATGACCACGAATGTAAATCTGGCAGTTAAACAAAAACACCAGAGCTTACAACTAATGTACTAAGAAACTAGCTAAAACCAAAACTTCTGCAGCCATGCTTCTGCACACATATGCTTGCATGACGGATGCTTCTACAGTATAAAATGCAATGTGTTGATGCTAGTCAAATAGATCAACTTTGGCTAATGGACAACCCAACCGCTATGTACGAAAGATCAGTCGTTAGGATTTTAAATCAATACATGTTCCGCTCGAAACATACCTCCTTTGGTTAGTTAGCTGTTCATAGCGTGTTTTAGTTTTCGCTTTTTTACCAATGTTCATAGTTCAGCGGACCGCTCGACAGCTACAGTTCGAACAAATTAAGACACACGTGCCATAATATCATCAATAAACCACGCAATTGTTTCATGTTCATTTTAGTTTGTTTGTGTCAGGATCCTCGATGATTACATACGTTGTG]

[+] EMBL BX608690             [GATATGAGTTTCTGTGCGTCTCTATCTAAAAGCACGTATATAAGCTGATCGTTTTGCTGCATGCAAAACAAATCTTTCAAATCTTTTTCTCTCTCTCGCTCAATCGAAGTATGAAACAATATTATTAATTTTAAACAAGTCTATTTGTGAATGCGACCCTTCAGTGGAAACAAAATGTTCATTACCAACACACCTACTTTTTGGAGTAAAGCTTTTTCCTACATTTACCTTCACCAGGTATTGTTACCATGACCACGAATGTAAATCTGGCAGTTAAACAAAAACACCAGAGCTTACAACTAATGTACTAAGAAACTAGCTAAAACCAAAACTTCTGCAGCCATGCTTCTGCACACATATGCTTGCATGACGGATGCTTCTACAGTATAAAATGCAATGTGTTGATGCTAGTCAAATAGATCAACTTTGGCTAATGGACAACCCAACCGCTATGTACGAAAGATCAGTCGTTAGGATTTTAAATCAATACATGTTCCGCTCGAAACATACCTCCTTTGGTTAGTTAGCTGTTCATAGCGTGTTTTAGTTTTCGCTTTTTTACCAATGTTCATAGTTCAGCGGACCGCTCGACAGCTACAGTTCGAACAAATTAAGACACACGTGCCATAATATCATCAATAAACCACGCAATTGTTTCATGTTCATTTTAGTTTGTTTGTGTCAGGATCCTCGATGATTACATACGTTGTG]
[+] EMBL BX615461             [                              AGCACGTATATAAGCTGATCGTTTTGCTGCATGCAAAACAAATCTTTCAAATCTTTTTCTCTCTCTCGCTCAATCGAAGTATGAAACAATATTATTAATTTTAAACAAGTCTATTTGTGAATGCGACCCTTCAGTGGAAACAAAATGTTCATTACCAACACACCTACTTTTTGGAGTAAAGCTTTTTCCTACATTTACCTTCACCAGGTATTGTTACCATGACCACGAATGTAAATCTGGCAGTTAAACAAAAACACCAGAGCTTACAACTAATGTACTAAGAAACTAGCTAAAACCAAAACTTCTGCAGCCATGCTTCTGCACACATATGCTTGCATGACGGATGCTTCTACAGTATAAAATGCAATGTGTTGATGCTAGTCAAATAGATCAACTTTGGCTAATGGACAACCCAACCGCTATGTACGAAAGATCAGTCGTTAGGATTTTAAATCAATACATGTTCCGCTCGAAACATACCTCCTTTGGTTAGTTAGCTGTTCATAGCGTGTTTTAGTTTTCGCTTTTTTACCAATGTTCATAGTTCAGCGGACCGCTCGACAGCTACAGTTCGAACAAATTAAGACACACGTGCCATAATATCATCAATAAACCACGCAATTGTTTCATGTTCATTTTAGTTTGTTTGTGTCAGGATCCTCGATGATTACATACGTTGTG]


>consensus_8769#2 GATATGAGTTTCTGTGCGTCTCTATCTAAAAGCACGTATATAAGCTGATCGTTTTGCTGC ATGCAAAACAAATCTTTCAAATCTTTTTCTCTCTCTCGCTCAATCGAAGTATGAAACAAT ATTATTAATTTTAAACAAGTCTATTTGTGAATGCGACCCTTCAGTGGAAACAAAATGTTC ATTACCAACACACCTACTTTTTGGAGTAAAGCTTTTTCCTACATTTACCTTCACCAGGTA TTGTTACCATGACCACGAATGTAAATCTGGCAGTTAAACAAAAACACCAGAGCTTACAAC TAATGTACTAAGAAACTAGCTAAAACCAAAACTTCTGCAGCCATGCTTCTGCACACATAT GCTTGCATGACGGATGCTTCTACAGTATAAAATGCAATGTGTTGATGCTAGTCAAATAGA TCAACTTTGGCTAATGGACAACCCAACCGCTATGTACGAAAGATCAGTCGTTAGGATTTT AAATCAATACATGTTCCGCTCGAAACATACCTCCTTTGGTTAGTTAGCTGTTCATAGCGT GTTTTAGTTTTCGCTTTTTTACCAATGTTCATAGTTCAGCGGACCGCTCGACAGCTACAG TTCGAACAAATTAAGACACACGTGCCATAATATCATCAATAAACCACGCAATTGTTTCAT GTTCATTTTAGTTTGTTTGTGTCAGGATCCTCGATGATTACATACGTTGTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8769#1      ------------------------------------------------------------
consensus_8769#2      ------------------------------------------------------------
consensus_8769#0      ATCCGCCCACGCGTCCGCAACGCCGCCCACACCTGCCCCACGCACTCCGAGCAAAACTTT 60
                                                                                  

consensus_8769#1      ------------------------------------------------------------
consensus_8769#2      ------------------------------------------------------------
consensus_8769#0      TAGTAATGTTACTCCCAAGAAAGTATCATCAGCCCCCTCTCGCATTCCGCTCGGAAACCG 120
                                                                                  

consensus_8769#1      ------------------------------------------------------------
consensus_8769#2      ------------------------------------------------------------
consensus_8769#0      GAGTAAAAAAATACCTGCTAAGTAGCAAATACGCAAATGTTGACGTAATATTTACTCAAG 180
                                                                                  

consensus_8769#1      ----------ATCGNCCGAGGCTTATTATTATTATTATTATTAT-GCTTCTTAGTCAGC- 48
consensus_8769#2      ------------------------------------------------------------
consensus_8769#0      AGCGGCAATGATGTCCCGCGCATCCCTGCCGACATAACGGAGATTGCAGCACATTGAGCG 240
                                                                                  

consensus_8769#1      TGCTTCAATAATAGCTATATAAAATGCATAA-ACTGATTAAACAAAAAAATACTCACCGC 107
consensus_8769#2      ------------------------------------------------------------
consensus_8769#0      TATTATGTTTTAAGCCAAAGGAAGTGTATATTACAAACCCAACTAACTACCTGTAACCGG 300
                                                                                  

consensus_8769#1      T--CTGT-AATCAATGCTGTAATAATCCAGGTATATTCATGAACAGTAACAGAAGAGAGC 164
consensus_8769#2      ------------------------------------------------------------
consensus_8769#0      AGGCGGTCGAACAGTGGTACAGCAGCGTGCTGATATATGATAGTGTTGGAAAGCTGGTGT 360
                                                                                  

consensus_8769#1      TAGGAAAG--TTTGAGGAGTGTTAAGGAGCAGCGAGTGTTAAAGATGGATTAGATTCGTT 222
consensus_8769#2      ------------------------------------------------------------
consensus_8769#0      ATAGAATGGATTTGGGATGTGTTAAATA-CTTTACACTCCAAACATAAAGCGCAATGATC 419
                                                                                  

consensus_8769#1      TAGTATTACAGCGTGTACAGCCAATAG-AAAGTAGGAAAGATGCATATTTTTGGTATTAT 281
consensus_8769#2      ------------------------------------------------------------
consensus_8769#0      GCACTGTTCTAGGTATGCTGCACGCACCAAAGACAGACAGATTCATACACGCTTCACACT 479
                                                                                  

consensus_8769#1      TATTTGTTTTCCTAAGGCCAACAACTATTTTACCTCGTTCGGTTCACCTAGCTCATTAAA 341
consensus_8769#2      ------------------------------------------------------------
consensus_8769#0      TGTTTGGTGTTTATAGTATCAAAATTACCATTTGATGATTCGTTCCAACACCATATGAAT 539
                                                                                  

consensus_8769#1      GCAGACCAAAAACTAAGTCATTAGATTAAAGCTTCAAAAGAATTACATTTTATTCCTAGT 401
consensus_8769#2      ------------------------------------------------------------
consensus_8769#0      GCATTATAAATACTT-GTGTATACACATTCGTCTAATGAATGTCGCATGCGGGCATTAAT 598
                                                                                  

consensus_8769#1      CTTTTCCCCCCTTTCTATCGAT-ATGAGTTTCTGTGCGTCTCTATCTAAAAGCACGTA-- 458
consensus_8769#2      -------------------GAT-ATGAGTTTCTGTGCGTCTCTATCTAAAAGCACGTA-- 38
consensus_8769#0      CATTGCATTCATATCTGGCATCCAAAAAGCGTTGCGAATAATTACATGGGATAAAGAAAA 658
                                             *  *     ** *  *   **  *   *  * * *  

consensus_8769#1      -TATAAGCTGATCGTTT-GCTGCATGCAAAACAAATCTTTCAAATCTTTTTCTCTCTCTC 516
consensus_8769#2      -TATAAGCTGATCGTTTTGCTGCATGCAAAACAAATCTTTCAAATCTTTTTCTCTCTCTC 97
consensus_8769#0      CTGTGACTGAATTACAGAGAATTGTGTATAGATTAGCTGAGGTATGGTTTTCTGTGTAAT 718
                       * * *    **      *     ** * *    * **     **  ****** * *   

consensus_8769#1      GCTCAATCGAAGTATGAAACAATATTATTCAATTTTAAACAAGTCTATT-GTGAATGCGA 575
consensus_8769#2      GCTCAATCGAAGTATGAAACAATATTATT-AATTTTAAACAAGTCTATTTGTGAATGCGA 156
consensus_8769#0      GGTCAAAAAGGCGTCGACCCGCCTCTCTTTCCGTTACGGCAACACCGTT-GCAATTGCG- 776
                      * ****         **  *     * **    **    ***  *  ** *  * **** 

consensus_8769#1      CC-TTCAGTGGAAACACAAATGTTCATTACCAAGCACACNCTACTATTATATGGAGTCAA 634
consensus_8769#2      CCCTTCAGTGGAAACA-AAATGTTCATTACCAA-CACACC----TACTTTTTGGAGT-AA 209
consensus_8769#0      CTGCTC--TGAAAATA-GCACGCATACAATCGTTTGCTCT-------TGT-TAAGATGAA 825
                      *   **  ** *** *   * *   *  * *     * *        * * *    * **

consensus_8769#1      AGCTTTTTTCCTACATTTAGCTTCACCAGGTATTGTTCACCATGAACACGGAATGTACAC 694
consensus_8769#2      AGCTTTTT-CCTACATTTACCTTCACCAGGTATTGTT-ACCATGACCACGAA---TGTAA 264
consensus_8769#0      AGCTTTAGGCGTTGTTTTG---TCGATTGAACTGCTTTACCTTTCGCGGGAAAAGTACTC 882
                      ******   * *   ***    **    *   *  ** *** *   *  * *   *    

consensus_8769#1      ATCTGGCC--AGNCTACCACCACANA---ACACCAGAGCTTTAACANAACTCAATGTAAC 749
consensus_8769#2      ATCTGGC---AGTTAAACA----AAA---ACACCAGAGCTT----ACAACT-AATGTACT 309
consensus_8769#0      ATCGAGCGGAAAACAATCCCTGTAGGTGTACGTAAAGGATTTTTTGTATTTTAATTTTTG 942
                      ***  **   *    * *     *     **   *  * **      *  * *** *   

consensus_8769#1      TAAAGAAACCTTAGNGCTACACAAACCCAACAAAACTTCCTGCAGGCCCACTGCTTACTG 809
consensus_8769#2      --AAGAAACT----AGCTA---AAACC----AAAACTTC-TGCAG--CCA-TGCTT-CTG 351
consensus_8769#0      CAAACCATGGCAGGCCGGAGTGAATATTGGGAGTGACAGTTGTAGG--GAAGGGATAGTG 1000
                        **  *           *   **       *        ** **    *  *  *  **

consensus_8769#1      GCCACN-ACACTTACTTGGCTTTGGCCNCTTGAACCGGGAATGCCTTCCTACCNCGGCAA 868
consensus_8769#2      CACACATATGCTTGCATGACGGATGCTTCTACAGTATAAAATGCAATGTGTTGATGCTAG 411
consensus_8769#0      ACCCTG---GATAAAGTACATAAAGTCCTTTTAGC--GGCACTTATTATTATTATTATTA 1055
                        *        *    *       *    *  *       *     *             

consensus_8769#1      TAACACAGCAACACAGGTAGGTCACGAATNGCCCTACNCTCAACACTACGATCCCACAAC 928
consensus_8769#2      TCAAATAG-ATCAACTTTGGCTAATGGACAACCCAACC------GCTATGTACGAAAGAT 464
consensus_8769#0      TTGCTTCTTAGTCAGCTTGCTTCATTAATAGCTATATAA-----AATGCATAAACTGATT 1110
                      *        *       *   * *   *   *   *          *             

consensus_8769#1      CAACAAGCGACCTCACANGGGGNANCCACAAAAGCGCCAAAAACGCAGCCGGTAACGGCG 988
consensus_8769#2      CAGTCGTTAGGATTTTAAATCAATACATGTTCCGCTCGAAACATACCTCCTTTGGTTAGT 524
consensus_8769#0      AAACAAAAAAATACTCACCGCTCTGTAATCAATGCTGTAATAATCCAGGTA-TATTCATG 1169
                       *              *                **   **  *  *      *       

consensus_8769#1      TACCCCGACACGAAGGAACTTCCCACGANCCCCCGCCTACACGACGGAANCACATCCGAC 1048
consensus_8769#2      TAGCTGTTCATAGCGTGTTTTAGTTTTCGCTTTTTTACCAATGTTCATAGTTCAGCGGAC 584
consensus_8769#0      AACAGTAACAGAAGAGAGCTA---GGAAAGTTTGAGGAGTGTTAAGGAGCAGCGAGTGTT 1226
                       *      **         *                                *    *  

consensus_8769#1      -ACAACATCACAGCANCCCGCACNGGCTACCCCCCNGCANTCCCACAANACCNCAACTAA 1107
consensus_8769#2      CGCTCGACAGCTACAGTTCGAACAAATTAAGACACAC--GTGCCATAATATCATCAATAA 642
consensus_8769#0      --AAAGATGGATTAGATTCGTTTAGTATTACAGCGTGTACAGCCAATAGAAAGTAGGAAA 1284
                            *           **       *              ***  * *        **

consensus_8769#1      AACCGATCCCCCCCTNATCCGGNGNGCAGCAGCGACCGACGAACGCCCAGGGCCCCCNCC 1167
consensus_8769#2      ACCACGCAATTGTTTCATGTTCATTTTAGTTTGTTTGTGTCAGGATCCTCGATGATTACA 702
consensus_8769#0      GATGCATATTTTTGGTATTATTATT----TGTTTTCCTAAGGNCAACAACTATTTTGCCT 1340
                                      **                            *           * 

consensus_8769#1      CACGCCGCGAGANCACCACACNAACCCAC-CCACACACCNCCACACTCTCCNACACCCCC 1226
consensus_8769#2      TACGTTGTG--------------------------------------------------- 711
consensus_8769#0      CGTTCGGNTCACCTAGCTCATTAAAGCAGACCAAAAACTAAGTCATTAGATTAAAGCTTC 1400
                            *                                                     

consensus_8769#1      AACA 1230
consensus_8769#2      ----
consensus_8769#0      AAAA 1404
                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)