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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8775#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1579 fasta sequence
[GTGAAAAGTGACGCCGGGCATTGTTTGCGTTTGTTGCGCTTTGCCGCAATATTTTCGTGCATTTTCAGTGAAAAATTAGATTAATTTAAAGCGCTTCCGCCTGCAAACCGGCAAAGCAACGATGAGCGGTAGCGGCATGCTGTACGGGGGCGATGAAATCGGTGCGCTCGTGTTCGATCCGGGCCACCATTCGCTGCGGGTAGGGTACGCACAGGATGACACACCGAAAGCCGACATCCCGTCCGTGGTCGGCGTTGGTCCGGCGGATCCGGTCATGAATTCGGATCTGGAGACGAAAGCGGACAACAACATTGGCAGCACGAACAAGTACTACGTAGACACAACGCACATCAATGTCGCACGGCCAAACATGGAAATTCAGTCGTACATGAAGGATGGCATGATTGAGAACTGGGATCTGTTCGAAAAGGTCATTGACTACGTGTATGCGAAGGTTGTACAGTCGGACTCGATGTACCATCCGGTGCTGTTTTCCGAATCTGCCTGGAACGTGCGCAACAATCGCGAACGACTGACCGAGCTCATGCTGGAAAAGTACAATGTTCCGGCATTCTTTCTCGTTAAAAATGCCG-TTTTGGCCGCGTTTGCCAACGGGCGCGCAACGGCACTGGTGG-TGGACAGCGGTGCAACACATACCTCAGCCGT-CCCCGTTCATGAAGGATACGTCCTCAGCCAGGCGGTAGT-AAAATCACCGCTCGGCGGTGATTACCTTTCCCTGCAGTGTCGCCATTATCTCGAAGGGCAAAACATTGACCTCACGCCAACGTACGCGATCGCTTCAAAGGACGTGATAAAGGAGCGCGATACGGCCCGGTTCACGCCGAAGGAGCTGCCGGAAAAGCTGACCGCCTCCTGGCAGCAGTACATGCTGAAAGGCCTCCTGCAGGACTTCCAGATGTCGGCCGTGCAGGTGCTGGAAACGCCGTACGATGAGCGTACGGCCGCCGCCATCCCGGCCGTACACTACGAGTTCCCGAACGGGTACCATCAGGACTTTGGTCCGGAGCGGTTCAAGCTGGCGGAGAGCCTGTTCGATCACAACATGCTCGGGGCGGGCCAGCTAGCATCGGCCAGCGTGGGCATGTGCGATGCGGACGTTCGCCTGTCGCTGTACGGTTCGGTGGTGGTGACGGGCGGCAACTCGCTGCTGCCCGGGTTTGCCGAACGGCTTAACCGGGACCTGCAGCACCGTGCGCCGTCGAACACGCGGTTAAAGATGATCTCGGCGAACGGGTCGGTCGAGCGGAGGTTCGGCGCGTGGATCGGCGGTTCGATTCTGGGCAGCATCGGCACATTCCAGCAGATGTGGATCTCCTCGCAGGAGTACGAAGAGTCGGGCAAAAGTCAGGTGGAGCGGAAGTGTCCCTAGAACGTGCACGGTGTGTTGAATGAGTGTGCGTGCGTCCCCGGTTCAGCGTGCGTAGTGTGTACTTTCATGCATTTGTG-TTTTTTTTTTAAACGAACCTCCATATTGTGTAATCCACTTACTTTTAGCTCCCTCGATGTGACAAGAAGCGGCAGGTTGTGAGAGAAATAATAACACACTGCATTCGTATTG]
[+] EMBL BX607610 [GTGAAAAGTGACGCCGGGCATTGTTTGCGTTTGTTGCGCTTTGCCGCAATATTTTCGTGCATTTTCAGTGAAAAATTAGATTAATTTAAAGCGCTTCCGCCTGCAAACCGGCAAAGCAACGATGAGCGGTAGCGGCATGCTGTACGGGGGCGATGAAATCGGTGCGCTCGTGTTCGATCCGGGCCACCATTCGCTGCGGGTAGGGTACGCACAGGATGACACACCGAAAGCCGACATCCCGTCCGTGGTCGGCGTTGGTCCGGCGGATCCGGTCATGAATTCGGATCTGGAGACGAAAGCGGACAACAACATTGGCAGCACGAACAAGTACTACGTAGACACAACGCACATCAATGTCGCACGGCCAAACATGGAAATTCAGTCGTACATGAAGGATGGCATGATTGAGAACTGGGATCTGTTCGAAAAGGTCATTGACTACGTGTATGCGAAGGTTGTACAGTCGGACTCGATGTACCATCCGGTGCTGTTTTCCGAATCTGCCTGGAACGTGCGCAACAATCGCGAACGACTGACCGAGCTCATGCTGGAAAAGTACAATGTTCCGGCATTCTTTCTCGTTAAAAATGCCG TTTTGGCCGCGTTTGCCAACGGGCGCGCAACGGCACTGGTGG TGGACAGCGGTGCAACACATACCTCAGCCGT CCCCGTTCATGAAGGATACGTCCTCAGCCAGGCGGTAGT AAAATCACCGCTCGGCGGTGATTACCTTTCCCTGCAGTGTCGCCATTATCTCGAAGGGCAAAACATTGACCTCACGCCAACGTACG ]
[+] EMBL BM599419 [ ccgGTGACGCCGGGCATTGTTTGCGTTTGTTGCGCTTTGCCGCAATATTTTCGTGCATTTTCAGTGAAAAATTAGATTAATTTAAAGCGCTTCCGCCTGCAAACCGGCAAAGCAACGATGAGCGGTAGCGGCATGCTGTACGGGGGCGATGAAATCGGTGCGCTCGTGTTCGATCCGGGCCACCATTCGCTGCGGGTAGGGTACGCACAGGATGACACACCGAAAGCCGACATCCCGTCCGTGGTCGGCGTTGGTCCGGCGGATCCGGTCATGAATTCGGATCTGGAGACGAAAGCGGACAACAACATTGGCAGCACGAACAAGTACTACGTAGACACAACGCACATCAATGTCGCACGGCCAAACATGGAAATTCAGTCGTACATGAAGGATGGCATGATTGAGAACTGGGATCTGTTCGAAAAGGTCATTGACTACGTGTATGCGAAGGTTGTACAGTCGGACTCGATGTACCATCCGGTGCTGTTTTCCGAATCTGCCTGGAACGTGCGCAACAATCGCGAACGACTGACCGAGCTCATGCTGGAAAAGTACAATGTTCCGGCATTCTTTCTCGTTAAAAATGCCGTTTTTGGCCGCGTTTGCCAACGGGCGCGCAACGGCACTGGTGGATGGACAGCGGTGCAACACATACCTC ]
[+] EMBL BM604784 [ ccgGTTTGCGTTTGTTGCGCTTTGCCGCAATATTTTCGTGCATTTTCAGTGAAAAATTAGATTAATTTAAAGCGCTTCCGCCTGCAAACCGGCAAAGCAACGATGAGCGGTAGCGGCATGCTGTACGGGGGCGATGAAATCGGTGCGCTCGTGTTCGATCCGGGCCACCATTCGCTGCGGGTAGGGTACGCACAGGATGACACACCGAAAGCCGACATCCCGTCCGTGGTCGGCGTTGGTCCGGCGGATCCGGTCATGAATTCGGATCTGGAGACGAAAGCGGACAACAACATTGGCAGCACGAACAAGTACTACGTAGACACAACGCACATCAATGTCGCACGGCCAAACATGGAAATTCAGTCGTACATGAAGGATGGCATGATTGAGAACTGGGATCTGTTCGAAAAGGTCATTGACTACGTGTATGCGAAGGTTGTACAGTCGGACTCGATGTACCATCCGGTGCTGTTTTCCGAATCTGCCTGGAACGTGCGCAACAATCGCGAACGACTGACCGAGCTCATGCTGGAAAAGTACAATGTTCCGGCATTCTTTCTCGTTAAAAATGCCG TTTTGGCCGCGTTTGCCAACGGGCGCGCAACGGCACTGGTGG TGGACAGCGGTGCAACACATACCTCAGCCGT CCCCGTTCATGAAGGATACGTCCTCA ]
[+] EMBL BM610703 [ ccgTGCGTTTGTTGTGCTTTGCCGCAATATTTTCGTGCATTTTCAGTGAAAAATTAGATTAATTTAAAGCGCTTCCGCCTGCAAACCGGCAAAGCAACGATGAGCGGTAGCGGCATGCTGTACGGGGGCGATGAAATCGGTGCGCTCGTGTTCGATCCGGGCCACCATTCGCTGCGGGTAGGGTACGCACAGGATGACACACCGAAAGCCGACATCCCGTCCGTGGTCGGCGTTGGTCCGGCAGATCCGGTCATGAATTCGGATCTGGAGACGAAAGCGGACAACAACATTGGCAGCACGAACAAGTACTACGTAGACACAACGCACATCAATGTCGCACGGCCAAACATGGAAATTCAGTCGTACATGAAGGATGGCATGATTGAGAACTGGGATCTGTTCGAAAAGGTCATTGACTACGTGTATGCGAAGGTTGTACAGTCGGACTCGATGTACCATCCGGTGCTGTTTTCCGAATCTGCCTGGAACGTGCGCAACAACCGCGAACGACTGACCGAGCTCATGCTGGAAAAGTACAATGTTCCGGCATTCTTTCTCGTAAAAAATGCCG TTTTAGCCGCGTTTGCCAACGGGCGCGCAACGGCACTGGTGG TGGACAGCGGTGCAACAC ]
[+] EMBL AGA284753 [ GAATCTGCCTGGAACGTGCGCAACAATCGCGAACGACTGACCGAGCTCATGCTGGAAAAGTACAATGTTCCGGCATTCTTTCTCGTTAAAAATGCCG TTTTGGCCGCGTTTGCCAACGGGCGCGCAACGGCACTGGTGG TGGACAGCGGTGTAACACATACCTCAGCCGT CCCCGTTCATGAAGGATACGTCCTCAGCCAGGCGGTAGT AAAATCACCGCTCGGCGGTGATTACCTTTCCCTGCAGTGTCGCCATTATCTCGAAGGGCAAAACATTGACCTCACGCCAACGTACGCGATCGCTTCGAAGGACGTGATAAAGGAGCGCGATACGGCCCGGTTCACGCCGAAGGAGCTGCCGGAAAAGCTGACCGCCTCCTGGCAGCAGTACATGCTGAAAGGCCTCCTGCAGGACTT ]
[+] EMBL CNS0959I [ TTGCCAACGGGCGCGCAACGGCACTGGTGG TGGACAGCGGTGCAACACATACCTCAGCCGT CCCCGTTCATGAAGGATACGTCCTCAGCCAGGCGGTAGT AAAATCACCGCTCGGCGGTGATTACCTTTCCCTGCAGTGTCGCCATTATCTCGAAGGGCAAAACATTGACCTCACGCCAACGTACGCGATCGCTTCAAAGGACGTGATAAAGGAGCGCGATACGGCCCGGTTCACGCCGAA GAGCTGCCGGAAAAGCTGACCGCCTCCTGGCAGCAGTACATGCTGAAAGGCCTCCTGCAGGACTTCCAGATGTCGGCCGTGCAGGTGCTGGAAACGCCGTACGATGAGCGTACGGCCGCCGCCATCCCGGCCGTACACTACGAGTTCCCGAACGGGTACCATCAGGACTTTGGTCCGGAGCGGTTCAAGCTGGCGGAGAGCCTGTTCGATCACAACATGCTCGGGGCGGGCCAGCTAGCATCGGCCAGCGTGGGCATGTGCGATGCGGACGTTCGCCTGTCGCTGTACGGTTCGGTGGTGGTGACGGGCGGCAACTCGCTGCTGCCCGGGTTTGCCGAACGGCTTAACCGGGACCTGCAGCACCGTGCGCCGTCGAACACGCGGTTAAAGATGATCTCGGCGAACGGGTCGGTCGAGCGGAGGTTCGGCGCGTGGATCGGCGGTTCGATTCTGGGCAGCATCGGCACATTCCAGCAGATGTGGATCTCCTCGCAGGAGTACGAAGAGTCGGGCAAAAGTCAGGTGGAGCGGAAGTGTCCCTAGAACGTGCACGGTGTGTTGAATGAGTGTGCGTGCGTCCCCGGTTCAGCGTGCGTAGTGTGTACTTTCATGCATTTGTG TTTTTTTTTTAAACGAACCTCCATATTGTGTAATCCACTTACTTTTAGCTCCCTCGATGTGACAAGAAGCGGCAGGTTGTGAGA AAATAATAACA ]
[-] EMBL CNS0959J [ CCGTCCCCCGTTCATGAAGGATACGTCCTCAGCCAGGCGGTAGTAAAAATCA CGCTCGGCGGTGATTACCTTTCCCTGCAGTGTCGCCATTATCTCGAAGGGCAAAACATTGACCTCACGCCCACGTACGCGATCGCTTCAAAGGACGTGATAAAGGAGCGCGATACGGCCCGGTTCACGCCGAAGGGGCTGCCGGAAAAGCTGACCGCCTCCTGGCAGCAGTACATGCTGAAAGGCCTCCTGCAGGACTTCCAGATTTCGGCCGTGCAGGTGCTGGAAACGCCGTACGATGAGCGTACGGCCGCCGCCATCCCGGCCGTACACTACGAGTTCCCGAACGGGTACCATCAGGACTTTGGTCCGGAGCGGTTCAAGCTGGCGGAGAGCCTGTTCGATCACAACATGCTCGGGGCGGGCCAGCTAGCATCGGCCAGCGTGGGCATGTGCGATGCGGACGTTCGCCTGTCGCTGTACGGTTCGGTGGTGGTGACGGGCGGCAACTCGCTGCTGCCCGGGTTTGCCGAACGGCTTAACCGGGACCTGCAGCACCGTGCGCCGTCGAACACGCGGTTAAAGATGATCTCGGCGAACGGGTCGGTCGAGCGGAGGTTCGGCGCGTGGATCGGCGGTTCGATTCTGGGCAGCATCGGCACATTCCAGCAGATGTGGATCTCCTCGCAGGAGTACGAAGAGTCGGGCAAAAGTCAGGTGGAGCGGAAGTGTCCCTAGAACGTGCACGGTGTGTTGAATGAGTGTGCGTGCGTCCCCGGTTCAGCGTGCGTAGTGTGTACTTTCATGCATTTGTG TTTTTTTTTTAAACGAACCTCCATATTGTGTAATCCACTTACTTTTAGCTCCCTCGATGTGACCAGAAGCGGCAGGTTGTGAGAGAAATAATAACACACTGCATTCGTATTG]
[-] EMBL CNS0961D [ TCGAACACGCGGTTAAAGATGATCTCGGCCAACGGGTCGGTCGAGCGGAGGTTCGGCGCGTGGATCGGTGGTTCGATTCTGGGCAGCATCGGCACATTCCAGCAGATGTGGATCTCCTCGCAGGAGTACGAAGAGTCGGGCAAAAGTCAGGTGGAGCGGAAGTGTCCCTAGAACGTGCACGGTGTGTTGAATAGGTGTGCGTGCATCCCCGGTTCAGTGTGCGTAGTGTGTACTTTCATGCATATGTGTTTTTTTTTTTTAACGAACCTCCATATTGTGTAATCCACTTACTTTTAGCTCCCTCGATGTGACAAGAAGCAGCAGGTTGTGAGAGAAATAATAACAAACTGCAT ]
consensusID : consensus_8775#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1107 fasta sequence
[GTTTGTTGTGCTTTGCCGCAATATTTTCGTGCACTTTCAGTGAAAAATTAGATTAATTTAAAAGCGCTTCCGCCTGCAAACCGGCAAAGCAACGATGAGCGGTAGCGGCATGCTGTACGGGGGCGATGAAATCGGTGCGCTCGTGTTCGATCCGGGCCACCATTCGCTGCGGGTAGGGTACGCACAGGATGACACACCGAAAGCCGACATCCCGTCCGTGGTCGGCGTTGGTCCGGCAGATCCGGTCATGAATTCGGATCTGGAGACGAAAGCGGACAACAACATTGGCAGCACGAACAAGTACTACGTAGACACAAGCACATCAATGTCGCACGGCCAAACATGGAAATTCAGTCGTACATGAAGGATGGCATGATTTGAGAACTGGGATCTGTTCGAAAAGGTCATTGACTACGTGTATGCGAAGGTTGTACAGTCGGACTCGATGTACCATCCGGTGCTGTTTTCCGAATCTGCTGGAACGTGCGCAAAACCGCGAACGGGTGACCGAGCTCATGCTGGAAACAGTACAATGTTCCGGCATTCTTCCTCGTTNAAAATGCCGTTACTGGCCGCGTTTGCCAACGGGCGCGCAAGTGACACTGGTTGGGTGGACAGCCGGTGCAAAAAATAACTCAGGCGTCCCGTCATGCANGATACGTCCATCAAGCAGGCGGTAGTTAAATCACCGTNTCGCGCNGGGTGGACTTAACCTTTTTTCNCCCTTGCAAGCGTGGTACGGCCANTNTATTCGTTCGGAAAGGGGACAAATACTTTGGANCCGTTCACGGGTCCCAATGGTTNAAGGGCCGNAAATTNGGGCCTTCCGTNAAAANGGGGGTACCTGTTTAAATTTTAACGTGGAACGCCGTNCCGTCAATAAANNGGTGACCCCTGTGTTTANAAGNTCGCACGAAAAGGNAACNCCTGTNCACCTGAAAAAANGTGCTCTGTAACCNCGGACNTCCCATGTNGTAGACAGTCGAATAGGTAACACANTTTGNGTTTGTAGAAACAGGGGGCTGGCATCTTGTANTGGAACATTTCCCCANAAATATTTTTTGCGTCNGCCGTGACAAAGCATTTCGTGGAAAAACCACCGTACTA]
[+] EMBL AL697344 [GTTTGTTGTGCTTTGCCGCAATATTTTCGTGCACTTTCAGTGAAAAATTAGATTAATTTAAAAGCGCTTCCGCCTGCAAACCGGCAAAGCAACGATGAGCGGTAGCGGCATGCTGTACGGGGGCGATGAAATCGGTGCGCTCGTGTTCGATCCGGGCCACCATTCGCTGCGGGTAGGGTACGCACAGGATGACACACCGAAAGCCGACATCCCGTCCGTGGTCGGCGTTGGTCCGGCAGATCCGGTCATGAATTCGGATCTGGAGACGAAAGCGGACAACAACATTGGCAGCACGAACAAGTACTACGTAGACACAAGCACATCAATGTCGCACGGCCAAACATGGAAATTCAGTCGTACATGAAGGATGGCATGATTTGAGAACTGGGATCTGTTCGAAAAGGTCATTGACTACGTGTATGCGAAGGTTGTACAGTCGGACTCGATGTACCATCCGGTGCTGTTTTCCGAATCTGCTGGAACGTGCGCAAAACCGCGAACGGGTGACCGAGCTCATGCTGGAAACAGTACAATGTTCCGGCATTCTTCCTCGTTNAAAATGCCGTTACTGGCCGCGTTTGCCAACGGGCGCGCAAGTGACACTGGTTGGGTGGACAGCCGGTGCAAAAAATAACTCAGGCGTCCCGTCATGCANGATACGTCCATCAAGCAGGCGGTAGTTAAATCACCGTNTCGCGCNGGGTGGACTTAACCTTTTTTCNCCCTTGCAAGCGTGGTACGGCCANTNTATTCGTTCGGAAAGGGGACAAATACTTTGGANCCGTTCACGGGTCCCAATGGTTNAAGGGCCGNAAATTNGGGCCTTCCGTNAAAANGGGGGTACCTGTTTAAATTTTAACGTGGAACGCCGTNCCGTCAATAAANNGGTGACCCCTGTGTTTANAAGNTCGCACGAAAAGGNAACNCCTGTNCACCTGAAAAAANGTGCTCTGTAACCNCGGACNTCCCATGTNGTAGACAGTCGAATAGGTAACACANTTTGNGTTTGTAGAAACAGGGGGCTGGCATCTTGTANTGGAACATTTCCCCANAAATATTTTTTGCGTCNGCCGTGACAAAGCATTTCGTGGAAAAACCACCGTACTA]
consensusID : consensus_8775#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 901 fasta sequence
[TCGCCCCGAGTTAACGGGCATGTTTGCGTTGTTGCGCTTTGCCGCAATATTTCGTGCATTTTCAGTGAAAAATTAGATTAATTTAAAGCGCTTCCGCCTGCAAACCGGCAAAGCAACGATGAGCGGTAGCGGCATGCTGTACGGGGGCGATGAAATCGGTGCGCTCGTGTTCGATCCGGGCCACCATTCGCTGCGGGTAGGGTACGCACAGGATGACACACCGAAAGCCGACATCCCGTCCGTGGTCGGCGTTGGTCCGGCGGATCCGGTCATGAATTCGGATCTGGAGACGAAAGCGGACAACAACATTGGCAGCACGAACAAGTACTACGTAGACACAACGCACATCAATGTCGCACGGCCAAACATGGAAATTCAGTCGTACATGAAGGATGGCATGATTGAGAACTGGGATCTGTTCGAAAAGGTCATTGACTACGTGTATGCGAAGGTTGTACAGTCGGACTCGATGTACCATCCGGTGCTGTTTTCCGAATCTGCCTGGAACGTGCGCAACAATCGCGAACGACTGACCGAGCTCATGCTGGAAAAGTACAATGTTCCGGCATTCTTTCTCGTTAAAAATGCCGTNTTGGCCGCGTTTGNCAACGGGCGCGCAACGGACTGGTGGTGGACAGCGGTGCAACACATACCTCAGCGCCCCGTCATGAGGATACGTCCTCAGCCAGGCGGGGAAGTAACAGTTCACCGGTCCGGGCGGGTGATTANCTTATTCCCTGGTCAGGTCGCCNTATTCTCNANGGGCAAACATTGACTTCAGNCAAAGTCAGCAACATCGTTCGAAGGACGTATTAAGGCCGGAAAGGCCGGTCACCGAAAGANNGCGAAAGTGACCGGCCTGCGCGTCATGTGAAGCCCNGNGATTCCATTTTGCGCGTTG]
[+] EMBL AL932122 [TCGCCCCGAGTTAACGGGCATGTTTGCGTTGTTGCGCTTTGCCGCAATATTTCGTGCATTTTCAGTGAAAAATTAGATTAATTTAAAGCGCTTCCGCCTGCAAACCGGCAAAGCAACGATGAGCGGTAGCGGCATGCTGTACGGGGGCGATGAAATCGGTGCGCTCGTGTTCGATCCGGGCCACCATTCGCTGCGGGTAGGGTACGCACAGGATGACACACCGAAAGCCGACATCCCGTCCGTGGTCGGCGTTGGTCCGGCGGATCCGGTCATGAATTCGGATCTGGAGACGAAAGCGGACAACAACATTGGCAGCACGAACAAGTACTACGTAGACACAACGCACATCAATGTCGCACGGCCAAACATGGAAATTCAGTCGTACATGAAGGATGGCATGATTGAGAACTGGGATCTGTTCGAAAAGGTCATTGACTACGTGTATGCGAAGGTTGTACAGTCGGACTCGATGTACCATCCGGTGCTGTTTTCCGAATCTGCCTGGAACGTGCGCAACAATCGCGAACGACTGACCGAGCTCATGCTGGAAAAGTACAATGTTCCGGCATTCTTTCTCGTTAAAAATGCCGTNTTGGCCGCGTTTGNCAACGGGCGCGCAACGGACTGGTGGTGGACAGCGGTGCAACACATACCTCAGCGCCCCGTCATGAGGATACGTCCTCAGCCAGGCGGGGAAGTAACAGTTCACCGGTCCGGGCGGGTGATTANCTTATTCCCTGGTCAGGTCGCCNTATTCTCNANGGGCAAACATTGACTTCAGNCAAAGTCAGCAACATCGTTCGAAGGACGTATTAAGGCCGGAAAGGCCGGTCACCGAAAGANNGCGAAAGTGACCGGCCTGCGCGTCATGTGAAGCCCNGNGATTCCATTTTGCGCGTTG]
[+] EMBL CNS0961C [ CGGCAAAGCAACGATGAGCGGTAGGGTCATGCTGTACGGGGGCGATGAAATCGGTGCGCTCGTGTTCGATCCGGGCCACCATTCGCTGCGGGTAGGGTACGCACAGGATGACACACCGAAAGCCGACATCCCGTCCGTGGTCGGCGTTGGTCCGGCAGATCCGGTCATGAATTCGGATCTGGAAACTAAAGCGGACAACAACATTGGCAGCACGAACAAGTACTACGTAGACACAACGCACATCAATGTCGCACGGCCAAACATGGAAATTCAGTCGTACATGAAGGATGGCATGATTGAGAACTGGGATCTGTTC ]
consensusID : consensus_8775#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 381 fasta sequence
[CAAGAATTGCCAGGTATGCCGGGCATTGTTTGCGTTGTGTGTGCTTTGCGCTATATTTCGTGCCATTTTCGTGAACAAATTAACTNATTTTAAAGGCGGCTTCCGCTGTTAACGGAAAGCAACGATGTAGCGGTANCGGATGCTGTACGGGGGCGATGAACATCGGTGCGCTCGTGTTCGATCCGGGCACCATTCCGCTGCGGGTAAGGTACCGCACAAGGATGACACACCCGAAAGCCGACATTCCGTCCGTGGTCGCGCCGTTTGGTCCGGCCGGATCCCGGTCATGAATTCCGGATCTGGAGACGAAAAGCGGACACAACATTGGCAGCACGAACAAGTACTATGTAGACACAAAGCACATCAATGTCGCACGGCAAA]
[+] EMBL AL930948 [CAAGAATTGCCAGGTATGCCGGGCATTGTTTGCGTTGTGTGTGCTTTGCGCTATATTTCGTGCCATTTTCGTGAACAAATTAACTNATTTTAAAGGCGGCTTCCGCTGTTAACGGAAAGCAACGATGTAGCGGTANCGGATGCTGTACGGGGGCGATGAACATCGGTGCGCTCGTGTTCGATCCGGGCACCATTCCGCTGCGGGTAAGGTACCGCACAAGGATGACACACCCGAAAGCCGACATTCCGTCCGTGGTCGCGCCGTTTGGTCCGGCCGGATCCCGGTCATGAATTCCGGATCTGGAGACGAAAAGCGGACACAACATTGGCAGCACGAACAAGTACTATGTAGACACAAAGCACATCAATGTCGCACGGCAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8775#0 -----GTGAAAAGTGACGCCGGGCATTGTTTGCGTTTGTTGCGCTTTGCCGCAATATTTT 55
consensus_8775#3 CAAGAATTGCCAGGTATGCCGGGCATTGTTTGCGTTGTGTGTGCTTTGC-GCTATATTT- 58
consensus_8775#2 -----TCGCCCCGAGTTAACGGGCAT-GTTTGCGTT-GTTGCGCTTTGCCGCAATATTT- 52
consensus_8775#1 ---------------------------------GTTTGTTGTGCTTTGCCGCAATATTTT 27
*** ** ******* ** ******
consensus_8775#0 CGTGCATTTTCAGTGAA-AAATTAGATTAATTTAAAG-CGCTTCCGCCTGCAAACCGGCA 113
consensus_8775#3 CGTGCCATTTTCGTGAACAAATTAACTNATTTTAAAGGCGGCTTCCGCTGTTAACGG--A 116
consensus_8775#2 CGTGCATTTTCAGTGAA-AAATTAGATTAATTTAAAG-CGCTTCCGCCTGCAAACCGGCA 110
consensus_8775#1 CGTGCACTTTCAGTGAA-AAATTAGATTAATTTAAAAGCGCTTCCGCCTGCAAACCGGCA 86
***** *** ***** ****** * * ****** ** * * *** *** * *
consensus_8775#0 AAGCAACGATG-AGCGGTAGCGGCATGCTGTACGGGGGCGATGAA-ATCGGTGCGCTCGT 171
consensus_8775#3 AAGCAACGATGTAGCGGTANCGG-ATGCTGTACGGGGGCGATGAACATCGGTGCGCTCGT 175
consensus_8775#2 AAGCAACGATG-AGCGGTAGCGGCATGCTGTACGGGGGCGATGAA-ATCGGTGCGCTCGT 168
consensus_8775#1 AAGCAACGATG-AGCGGTAGCGGCATGCTGTACGGGGGCGATGAA-ATCGGTGCGCTCGT 144
*********** ******* *** ********************* **************
consensus_8775#0 GTTCGATCCGGGCCACCATTCGCTGCGGGTAGGGTAC-GCACA-GGATGACACACC-GAA 228
consensus_8775#3 GTTCGATCCGGGCACCATTCCGCTGCGGGTAAGGTACCGCACAAGGATGACACACCCGAA 235
consensus_8775#2 GTTCGATCCGGGCCACCATTCGCTGCGGGTAGGGTAC-GCACA-GGATGACACACC-GAA 225
consensus_8775#1 GTTCGATCCGGGCCACCATTCGCTGCGGGTAGGGTAC-GCACA-GGATGACACACC-GAA 201
************* * * *********** ***** ***** ************ ***
consensus_8775#0 AGCCGACATCCCGTCCGTGGTCGG--CGTT-GGTCCGGC-GGATCC-GGTCATGAATTC- 282
consensus_8775#3 AGCCGACATTCCGTCCGTGGTCGCGCCGTTTGGTCCGGCCGGATCCCGGTCATGAATTCC 295
consensus_8775#2 AGCCGACATCCCGTCCGTGGTCGG--CGTT-GGTCCGGC-GGATCC-GGTCATGAATTC- 279
consensus_8775#1 AGCCGACATCCCGTCCGTGGTCGG--CGTT-GGTCCGGC-AGATCC-GGTCATGAATTC- 255
********* ************* **** ******** ***** ************
consensus_8775#0 GGATCTGGAGACGAAA-GCGGACAACAACATTGGCAGCACGAACAAGTACTACGTAGACA 341
consensus_8775#3 GGATCTGGAGACGAAAAGCGGACA-CAACATTGGCAGCACGAACAAGTACTATGTAGACA 354
consensus_8775#2 GGATCTGGAGACGAAA-GCGGACAACAACATTGGCAGCACGAACAAGTACTACGTAGACA 338
consensus_8775#1 GGATCTGGAGACGAAA-GCGGACAACAACATTGGCAGCACGAACAAGTACTACGTAGACA 314
**************** ******* *************************** *******
consensus_8775#0 CAACGCACATCAATGTCGCACGGCCAAACATGGAAATTCAGTCGTACATGAAGGATGGCA 401
consensus_8775#3 CAAAGCACATCAATGTCGCACGGCAAA--------------------------------- 381
consensus_8775#2 CAACGCACATCAATGTCGCACGGCCAAACATGGAAATTCAGTCGTACATGAAGGATGGCA 398
consensus_8775#1 CAA-GCACATCAATGTCGCACGGCCAAACATGGAAATTCAGTCGTACATGAAGGATGGCA 373
*** ******************** **
consensus_8775#0 TGATT-GAGAACTGGGATCTGTTCGAAAAGGTCATTGACTACGTGTATGCGAAGGTTGTA 460
consensus_8775#3 ------------------------------------------------------------
consensus_8775#2 TGATT-GAGAACTGGGATCTGTTCGAAAAGGTCATTGACTACGTGTATGCGAAGGTTGTA 457
consensus_8775#1 TGATTTGAGAACTGGGATCTGTTCGAAAAGGTCATTGACTACGTGTATGCGAAGGTTGTA 433
consensus_8775#0 CAGTCGGACTCGATGTACCATCCGGTGCTGTTTTCCGAATCTGCCTGGAACGTGCGCAAC 520
consensus_8775#3 ------------------------------------------------------------
consensus_8775#2 CAGTCGGACTCGATGTACCATCCGGTGCTGTTTTCCGAATCTGCCTGGAACGTGCGCAAC 517
consensus_8775#1 CAGTCGGACTCGATGTACCATCCGGTGCTGTTTTCCGAATCTGC-TGGAACGTGCGCAA- 491
consensus_8775#0 AATCGCGAACGACTGACCGAGCTCATGCTGGAAA-AGTACAATGTTCCGGCATTCTTTCT 579
consensus_8775#3 ------------------------------------------------------------
consensus_8775#2 AATCGCGAACGACTGACCGAGCTCATGCTGGAAA-AGTACAATGTTCCGGCATTCTTTCT 576
consensus_8775#1 AACCGCGAACGGGTGACCGAGCTCATGCTGGAAACAGTACAATGTTCCGGCATTCTTCCT 551
consensus_8775#0 CGTTAAAAATGCCGTT-TTGGCCGCGTTTGCCAACGGGCGCGCAA-CGGCACTGGT--GG 635
consensus_8775#3 ------------------------------------------------------------
consensus_8775#2 CGTTAAAAATGCCGTN-TTGGCCGCGTTTGNCAACGGGCGCGCAA-CGG-ACTGGT--GG 631
consensus_8775#1 CGTTNAAAATGCCGTTACTGGCCGCGTTTGCCAACGGGCGCGCAAGTGACACTGGTTGGG 611
consensus_8775#0 TGGACAGC-GGTGCAACACATACCTCAGCCGTCCCCGTTCATGAAGGATACGTCC-TCAG 693
consensus_8775#3 ------------------------------------------------------------
consensus_8775#2 TGGACAGC-GGTGCAACACATACCTCAGCG---CCCCGTCATGA-GGATACGTCC-TCAG 685
consensus_8775#1 TGGACAGCCGGTGCAAAAAATAACTCAGGCG--TCCCGTCATGCANGATACGTCCATCAA 669
consensus_8775#0 CCAGGCGGT--AGTAAAA--TCACCGCTCGGCG---GTGATTACCTTTCCCTGCAGT--- 743
consensus_8775#3 ------------------------------------------------------------
consensus_8775#2 CCAGGCGGGGAAGTAACAGTTCACCGGTCCGGGCGGGTGATTANCTTATTCCCTGGTCAG 745
consensus_8775#1 GCAGGCGGT--AGTTAAA--TCACCGTNTCGCGC--NGGGTGGACTTAACCTTTTTT--- 720
consensus_8775#0 GTCGCCATTATCTCGAAGGGCAAAACATTGACCTCACGCCAACGTACGCGATCGC-TTCA 802
consensus_8775#3 ------------------------------------------------------------
consensus_8775#2 GTCGCCNTATTCTCNANGGGCAAA-CATTGACTTCA-GNCAAAGTCAGCAACATCGTTCG 803
consensus_8775#1 --CNCCCTTGCAAGCGTGGTACGGCCANTNTATTCGTTCGGA---AAGGGGACAAATACT 775
consensus_8775#0 AAGGACGTGATAAAGGAGCGCGATACGGCCCGGTTCACGCCGAAGGAGCTGCCGGAAAAG 862
consensus_8775#3 ------------------------------------------------------------
consensus_8775#2 AAGGACGTATTAAGGC----CGGAAAGGCCGGTCACCGAAAGANNGCGAAAGTGACCGGC 859
consensus_8775#1 TTGGANCCGTTCACGGGTCCCAATGGTTNAAGGGCCGNAAATTNGGGCCTTCCGTNAAAA 835
consensus_8775#0 CTGACCGCCTCCTGGCAGCAGTACATGCTGAAAGGCCTCCTGCAGGACTTCCAGATGTCG 922
consensus_8775#3 ------------------------------------------------------------
consensus_8775#2 CTGCGCGTCATGTGAAGCCCNGNGATTCCATTTTGCGCGTTG------------------ 901
consensus_8775#1 NGGG--GGTACCTGTTTAAATTTTAACGTGGAACGCCGTNCCGTCAATAAANNGGTGACC 893
consensus_8775#0 GCCGTGC--AGGTGCTGGAAACGCCGTACGATGAGCGTACGGCCGCCGCCATCCCGGCCG 980
consensus_8775#3 ------------------------------------------------------------
consensus_8775#2 ------------------------------------------------------------
consensus_8775#1 CCTGTGTTTANAAGNTCGCACGAAAAGGNAACNCCTGTNCACCTGAAAAAANGTGCTCTG 953
consensus_8775#0 TACACTACGAGTTCCCGAACGG------GTACCATCAGGACTTTGGTCCGGAGCGGTTCA 1034
consensus_8775#3 ------------------------------------------------------------
consensus_8775#2 ------------------------------------------------------------
consensus_8775#1 TAACCNCGGACNTCCCATGTNGTAGACAGTCGAATAGGTAACACANTTTGNGTTTGTAGA 1013
consensus_8775#0 AGCTGGCGGAGAGCCTGTTCGATCACAACATGCTCGGGGCGGGCCAGCTAGCATCGGCCA 1094
consensus_8775#3 ------------------------------------------------------------
consensus_8775#2 ------------------------------------------------------------
consensus_8775#1 AACAGGGGGCTGGCATCTTGTANTGGAACATTTCCCCANAAATATTTTTTGCGTCNGCC- 1072
consensus_8775#0 GCGTGGGCATGTGCGATGCGGACGTTCGCCTGTCGCTGTACGGTTCGGTGGTGGTGACGG 1154
consensus_8775#3 ------------------------------------------------------------
consensus_8775#2 ------------------------------------------------------------
consensus_8775#1 GTGACAAAGCATTTCGTGGAAAAACCACCGTACTA------------------------- 1107
consensus_8775#0 GCGGCAACTCGCTGCTGCCCGGGTTTGCCGAACGGCTTAACCGGGACCTGCAGCACCGTG 1214
consensus_8775#3 ------------------------------------------------------------
consensus_8775#2 ------------------------------------------------------------
consensus_8775#1 ------------------------------------------------------------
consensus_8775#0 CGCCGTCGAACACGCGGTTAAAGATGATCTCGGCGAACGGGTCGGTCGAGCGGAGGTTCG 1274
consensus_8775#3 ------------------------------------------------------------
consensus_8775#2 ------------------------------------------------------------
consensus_8775#1 ------------------------------------------------------------
consensus_8775#0 GCGCGTGGATCGGCGGTTCGATTCTGGGCAGCATCGGCACATTCCAGCAGATGTGGATCT 1334
consensus_8775#3 ------------------------------------------------------------
consensus_8775#2 ------------------------------------------------------------
consensus_8775#1 ------------------------------------------------------------
consensus_8775#0 CCTCGCAGGAGTACGAAGAGTCGGGCAAAAGTCAGGTGGAGCGGAAGTGTCCCTAGAACG 1394
consensus_8775#3 ------------------------------------------------------------
consensus_8775#2 ------------------------------------------------------------
consensus_8775#1 ------------------------------------------------------------
consensus_8775#0 TGCACGGTGTGTTGAATGAGTGTGCGTGCGTCCCCGGTTCAGCGTGCGTAGTGTGTACTT 1454
consensus_8775#3 ------------------------------------------------------------
consensus_8775#2 ------------------------------------------------------------
consensus_8775#1 ------------------------------------------------------------
consensus_8775#0 TCATGCATTTGTGTTTTTTTTTTAAACGAACCTCCATATTGTGTAATCCACTTACTTTTA 1514
consensus_8775#3 ------------------------------------------------------------
consensus_8775#2 ------------------------------------------------------------
consensus_8775#1 ------------------------------------------------------------
consensus_8775#0 GCTCCCTCGATGTGACAAGAAGCGGCAGGTTGTGAGAGAAATAATAACACACTGCATTCG 1574
consensus_8775#3 ------------------------------------------------------------
consensus_8775#2 ------------------------------------------------------------
consensus_8775#1 ------------------------------------------------------------
consensus_8775#0 TATTG 1579
consensus_8775#3 -----
consensus_8775#2 -----
consensus_8775#1 -----
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||