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Anopheles gambiae
cluster # 8797 cluster # 8797       Sequences # 12       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8797#0 length = 713 sequences # 5  
consensus_8797#1 length = 676 sequences # 5  
consensus_8797#2 length = 654 sequences # 1  
consensus_8797#3 length = 575 sequences # 1  

consensusID : consensus_8797#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 713
fasta sequence
                              [CCGGCACACGACTTTGTACATATTCCGTTGATTTCCCCCAAAACCTTTAACTAAAACGCACTTCCCGTACAAATTACGATGGCCCGTGGACACCAGAAGATCCAGTCGCAGCAGAAGGCGCAGGAAAAGGCTGCCAAGATGAAGAAGCAGCAAGGGCACGGGCTGAGCGACCAGATGAAGGCGGCCCAGAAAGCGCTCGTGTTCTCCTGCGCGGTGTGCAAATCACAGATGCCCGACCCGAAAACGTACAAGCAGCACTTTGAAAACAAACATCCCAAAAATGATCTCCCGGCAGAGCTGAAGGACGTCGTCTAAAGGCGAGCGGATGCGCAAGGGTGCACCACGCCGACCAACCACACACACTAACCAGCCAAAGGGGGTGATGCAGCAGACCGTTTTGGTTTGGGTGTACTTTTTTCCCTCCAGTTCTTTAAACAACCAGCAACCGGACACACACACACACAGAGACGATTGTGGTCTTCGATTAATTTAATTTCGTATCGCGAAATTAAGTAGAGAATTTAGCGCACGCAACGTTAGGCCATGATGAGCATTGCTTCTGTTCGGTTTTCCTAGGACTACAGGCAGGCTACCAAT-CCCTTTATTATTCTGAGCAGCAAACTCTTTAAAAATGTGTAACGATAAAGTAAACTAAATAAAGCCGTTGACATTTTTTGAATAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCC]

[+] EMBL BM597081             [CCGGCACACGACTTTGTACATATTCCGTTGATTTCCCCCAAAACCTTTAACTAAAACGCACTTCCCGTACAAATTACGATGGCCCGTGGACACCAGAAGATCCAGTCGCAGCAGAAGGCGCAGGAAAAGGCTGCCAAGATGAAGAAGCAGCAAGGGCACGGGCTGAGCGACCAGATGAAGGCGGCCCAGAAAGCGCTCGTGTTCTCCTGCGCGTTGTGCAAATCACAGATGCCCGACCCGAAAACGTACAAGCAGCACTTTGAAAACAAACATCCCAAAAATGATCTCCCGGTAGAGCTGAAGGACGTCGTCTAAAGGCGAGCGGATGCGCAAGGGTGCACCACGCCGACCAACCACACACACTAACCAGCCAAAGGGGGTGATGCATCAGACCGTTTTGGTTTGGGTGTACTTTTTTCCCTCCAGTTCTTTAAACAACCAGCAACCGGACACACACACACACAGAGACGATTGTGGTCTTCGATTAATTTAATTTCGTATCGCGAAATTAAGTACAGAATTTAGCGCACGCAACGTTAGGCCATGATGAGCATTGCTTCTGTTCGGTTTTCCTAGGACTACAGGCAGGCTACCAAT CCCTT                                                                                                               ]
[+] EMBL CNS08X9W             [     aaACGACTTTGTACATATTCCGTTGATTTCCCCCAAAACCTTTAACTAAAACGCACTTCCCGTACAAATTACGATGGCCCGTGGACACCAGAAGATCCAGTCGCAGCAGAAGGCGCAGGAAAAGGCTGCCAAGATGAAGAAGCAGCAGGGGCACGGGCTGAGCGACCAGATGAAGGCGGCCCAGAAAGCGCTCGTGTTCTCCTGCGCGGTGTGCAAATCACAGATGCCCGACCCGAAAACGTACAAGCAGCACTTTGAAAACAAACATCCCAAAAATGATCTCCCGGCAGAGCTGAAGGACGTCGTCTAAAGGCGAGCGGATGCGCAAGGGTGCACCACGCCGACCAACCACACACACTAACCCGCCAAAGGGGGTGATGCAGCAGACCGCTTTGGTTTGGGTGTACTTTTTTCCCTCCAGTTCTTTAAACAACCAGCAACCGG  ACACACACACACAGAGACGATTGTGGTTTTCGATTAATTTAATTTCGTATCGCGAAATTAAGTAGAGAATTTAGCGCACGCAACGTTAGGCCATGATGAGCATTGCTTCTGTTCGGTTTTCCTAGGACTACAGGCAGGCTACCAAT CCCTTTATTATTCTGAGCAGCAAACTCTTTAAAAATGTGTAACGATAAAGTAAACTAAATAAAGCCGTTGACATTTTTTGAATAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCC]
[+] EMBL BM636883             [                       ccgGTTGATTTCCCCCAAAACCTTTAACTAAAACGCACTTCCCGTACAAATTACGATGGCCCGTGGACACCAGAAGATCCAGTCGCAGCAGAAGGCGCAGGAAAAGGCTGCCAAGATGAAGAAGCAGCAGGGGCACGGGCTGAGCGACCAGATGAAGGCGGCCCAGAAAGCGCTCGTGTTCTCCTGCGCGGTGTGCAAATCACAGATGCCCGACCCGAAAACGTACAAGCAGCACTTTGAAAACAAACATCCCAAAAATGATCTCCCGGCAGAGCTGAAGGACGTCGTCTAAAGGCGAGCGGATGCGCAAGGGTGCACCACGCCGACCAACCACACACACTAACCCGCCAAAGGGGGTGATGCAGCAGACCGCTTTGGTTTGGGTGTACTTTTTTCCCTCCAGTTCTTTAAACAACCAGCAACCGG  ACACACACACACAGAGACGATTGTG                                                                                                                                                                                                                                              ]
[+] EMBL BM575816             [                                  CCGCCAAAACCTTTAACTAAAACGCACTTCCCGTACAAATTACGATGGCCCGTGGACACCAGAAGATCCAGTCGCAGCAGAAGGCGCAGGAAAAGGCTGCCAAGATGAAGAAGCAGCAAGGGCACGGGCTGAGCGACCAGATGAAGGCGGCCCAGAAAGCGCTCGTGTTCTCCTGCGCGGTGTGCAAATCACAGATGCCCGACCCGAAAACGTACAAGCAGCACTTTGAAAACAAACATCCCAAAAATGATCTCCCGGCAGAGCTGAAGGACGTCGTCTAAAGGCGAGCGGATGCGCAAGGGTGCACCACGCCGACCAACCACACACACTAACCAGCCAAAGGGGGTGATGCAGCAGACCGTTTTGGTTTGGGTGTACTTTTTTCCCTCCAGTTCTTTAAACAACCAGCAACCGGACACACACACACACAGAGACGATTGTGGTCTTCGATTAATTTAATTTCGTATCGCGAAATTAAGTAGAGAATTTAGCGCACGCAACGTTAGGCCATGATGAGCATTGCTTCTGTTCGGTTTTCCTAGGACTACAGGCAGGCTACCAATCCCCTTTATTATTCTG                                                                                                     ]
[+] EMBL BX622082             [                                                                       AATTACGATGGCCCGTGGACACCAGAAGATCCAGTCGCAGCAGAAGGCGCAGGAAAAGGCTGCCAAGATGAAGAAGCAGCAAGGGCACGGGCTGAGCGACCAGATGAAGGCGGCCCAGAAAGCGCTCGTGTTCTCCTGCGCGGTGTGCAAATCACAGATGCCCGACCCGAAAACGTACAAGCAGCACTTTGAAAACAAACATCCCAAAAATGATCTCCCGGCAGAGCTGAAGGACGTCGTCTAAAGGCGAGCGGATGCGCAAGGGTGCACCACGCCGACCAACCACACACACTAACCAGCCAAAGGGGGTGATGCAGCAGACCGTTTTGGTTTGGGTGTACTTTTTTCCCTCCAGTTCTTTAAACAACCAGCAACCGGACACACACACACACAGAGACGATTGTGGTCTTCGATTAATTTAATTTCGTATCGCGAAATTAAGTAGAGAATTTAGCGCACGCAACGTTAGGCCATGATGAGCATTGCTTCTGTTCGGTTTTCCTAGGACTACAGGCAGGCTACCAAT CCCTTTATTATTCTGAGCAGCAAACTCTTTGATAATGTGTAACGATAAAGTAAACTAAATAAAGCCGTTGACATT                                         ]


>consensus_8797#0 CCGGCACACGACTTTGTACATATTCCGTTGATTTCCCCCAAAACCTTTAACTAAAACGCA CTTCCCGTACAAATTACGATGGCCCGTGGACACCAGAAGATCCAGTCGCAGCAGAAGGCG CAGGAAAAGGCTGCCAAGATGAAGAAGCAGCAAGGGCACGGGCTGAGCGACCAGATGAAG GCGGCCCAGAAAGCGCTCGTGTTCTCCTGCGCGGTGTGCAAATCACAGATGCCCGACCCG AAAACGTACAAGCAGCACTTTGAAAACAAACATCCCAAAAATGATCTCCCGGCAGAGCTG AAGGACGTCGTCTAAAGGCGAGCGGATGCGCAAGGGTGCACCACGCCGACCAACCACACA CACTAACCAGCCAAAGGGGGTGATGCAGCAGACCGTTTTGGTTTGGGTGTACTTTTTTCC CTCCAGTTCTTTAAACAACCAGCAACCGGACACACACACACACAGAGACGATTGTGGTCT TCGATTAATTTAATTTCGTATCGCGAAATTAAGTAGAGAATTTAGCGCACGCAACGTTAG GCCATGATGAGCATTGCTTCTGTTCGGTTTTCCTAGGACTACAGGCAGGCTACCAATCCC TTTATTATTCTGAGCAGCAAACTCTTTAAAAATGTGTAACGATAAAGTAAACTAAATAAA GCCGTTGACATTTTTTGAATAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCC



consensusID : consensus_8797#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 676
fasta sequence
                              [CCGGCCGGGCTAATCGTGGTGCGTGGTACGTTTCAACCGAGTTAAGGTGTAAAATTTGTTTATAAATCGCATACAATGGCTCGCGGTCACCAGAAGATCCAGTCGCAGCAGAAGGCGCAGGAAAAGGCTGCCAAGCTAAAGAAGCAGCAGGGGCACGGGCTGAGCGACCAGATGAAGGCGGCCCAGAAAGCGCTCGTGTTCTCCTGCGCGGTGTGCAAATCACAGATGCCCGACCCGAAAACGTACAAGCAGCACTTTGAAAATAAACATCCCAAGAACGAACTCCCGGCCGAGCTGAAGGACGTTTAACAATCGGACGGGCGCACGCACGCTGGCGTGATATAGATTGGGGATGCCCGCTTATCCGAGAGGTTCGATTCCGTGAATTGCTTCAACGATGGTTAGTGTATGCCGCCGGTTAAAGTCGCTTACGTTTACATTGAGATTATTTCCTTCTGCTTCCGCCGTATGCTTGCAAATCCACAGTTAGAGCGCGTTTTAGTTAATTCAGTGCAAGAGAGCACCCAGG-GTTTGCATGTTTCCTACCCACACGTTCAATGTAAATAGATAGAAAAAGAAAACGGTTTTAAAGCGATCGTGCATTTGTTTGTGAGATACAAC-TTTCCCTAAGCGCTTTCCACACTACCTGACCACCTCACAACACGACAAGTATTAA]

[+] EMBL BM590377             [CCGGTGAGGCTAATCGTGGTGCGTGGTACGTTTCAACCGAGTTAAGGTGTAAAATTTGTTTATAAATCGCATACAATGGCTCGCGGTCACCAGAAGATCCAGTCGCAGCAGAAGGCGCAGGAAAAGGCTGCCAAGCTAAAGAAGCAGCAGGGGCACGGGCTGAGCGACCAGATGAAGGCGGCCCAGAAAGCGCTCGTGTTCTCCTGCGCGGTGTGCAAATCACAGATGCCCGACCCGAAAACGTACAAGCAGCACTTTGAAAATAAACATCCCAAGAACGAACTCCCGGCCGAGCTGAAGGACGTTTAACAATCGGACGGGCGCACGCACGCTGGCGTGATATAGATTGGGGATGCCCGCTTATCCGAGAGGTTCGATTCCGTGAATTGCTTCAACGATGGTTAGTGTATGCCGCCGGTTAAAGTCGCTTACGTTTACATTGAGATTATTTCCTTCTGCTTCCGCCGTATGCTTGCAAATCCACAGTTAGAGCGCGTTTTAGTTAATTCAGTGCAAGAGAGCACCCAGG GTTTGCATGTTTCCTACCCACACGTTCAATGTAGATAGATAGAAAAAGAAAACGGTTTTAAAGCGATCGTGCATTTGTTTGTGA                                                                ]
[+] EMBL BM593989             [    CCGGGCTAATCGTGGTGCGTGGTACGTTTCAACCGAGTTAAGGTGTAAAATTTGTTTATAAATCGCATACAATGGCTCGCGGTCACCAGAAGATCCAGTCGCAGCAGAAGGCGCAGGAAAAGGCTGCCAAGCTAAAGAAGCAGCAGGGGCACGGGCTGAGCGACCAGATGAAGGCGGCCCAGAAAGCGCTCGTGTTCTCCTGCGCGGTGTGCAAATCACAGATGCCCGACCCGAAAACGTACAAGCAGCACTTTGAAAATAAACATCCCAAGAACGAACTCCCGGCCGAGCTGAAGGACGTTTAACAATCGGACGGGCGCACGCACGCTGGCGTGATATAGATTGGGGATGCCCGCTTATCCGAGAGGTTCGATTCCGTGAATTGCTTCAACGATGGTTAGTGTATGCCGCCGGTTAAAGTCGCTTACGTTTACATTGAGATTATTTCCTTCTGCTTCCGCCGTATGCTTGCAAATCCACAGTTAGAGCGCGTTTTAGTTAATTCAGTGCAAGAGAGCACCCAGG GTTTGCATGTTTCCTACCCACACGTTCAATGTAAATAGATAGAAAAAGAAAACGGTTTTAAAGCGATCGTGCATTTGTTTGTGAAATACAACTTTTCCCTAAGCGCTTTCCACACTACCTGACCACCTCACAACA             ]
[+] EMBL BM608273             [    CCGGGCTAATCGTGGTGCGTGGTACGTTTCAACCGAGTTAAGGTGTAAAATTTGTTTATAAATCGCATACAATGGCTCGCGGTCACCAGAAGATCCAGTCGCAGCAGAAGGCGCAGGAAAAGGCTGCCAAGCTAAAGAAGCAGCAGGGGCACGGGCTGAGCGACCAGATGAAGGCGGCCCAGAAAGCGCTCGTGTTCTCCTGCGCGGTGTGCAAATCACAGATGCCCGACCCGAAAACGTACAAGCAGCACTTTGAAAACAAACATCCCAAGAACGAACTCCCGGCCGAGCTGAAGGACGTTTAACAATCGGACGGGCGCACGCACGCTGGCGTGATACAGATTGGGGATGCCCGCTTATCCGAGAGGTTCGATTCCGTGAATTGCTTCAACGATGGTTAGTGTATGCCGCCGGTTAAAGTCGCTTACGTTTACATTGAGATTATTTCCTTCTGCTTCCGCCGTATGCTTGCAAATCCACCGTTAGAGCGCGTTTTAGTTAATTCAGTGCAAGAGAGCACCCAGGAGTTTGCATGTTTCCTACCCACACGTTCAATGTAAATAGATAGAAAAAGAAAACGGTTTTAAAGCGATCGTGCATTTGTTTGTGAGATACAAC TTTCCCTAAGCGCTTTCCACACTGCCTGACCACCTCACA                ]
[+] EMBL BX608043             [                                         TTAAGGTGTAAAATTTGTTTATAAATCGCATACAATGGCTCGCGGTCACCAGAAGATCCAGTCGCAGCAGAAGGCGCAGGAAAAGGCTGCCAAGCTAAAGAAGCAGCAGGGGCACGGGCTGAGCGACCAGATGAAGGCGGCCCAGAAAGCGCTCGTGTTCTCCTGCGCGGTGTGCAAATCACAGATGCCCGACCCGAAAACGTACAAGCAGCACTTTGAAAACAAACATCCCAAGAACGAACTCCCGGCCGAGCTGAAGGACGTTTAACAATCGGACGGGCGCACGCACGCTGGCGTGATACAGATTGGGGATGCCCGCTTATCCGAGAGGTTCGATTCCGTGAATTGCTTCAACGATGGTTAGTGTATGC  CCGGTTAAAGTCGCTTACGTTTACATTGAGATTATTTCCTTCTGCTTCCGCCGTATGCTTGCAAATCCACCGTTAGAGCGCGTTTTAGTTAATTCAGTGCAGGAGAGCACCCAGA GT                                                                                                                                                  ]
[+] EMBL BM596325             [                                                                                                                                                                                             cCGCTCGTGTTCTCCTGCGCGGTGTGCAAATCACAGATGCCCGACCCGAAAACGTACAAGCAGCACTTTGAAAATAAACATCCCAAGAACGAACTCCCGGCCGAGCTGAAGGACGTTTAACAATCGGACGGGCGCACGCACGCTGGCGTGATATAGATTGGGGATGCCCGCTTATCCGAGAGGTTCGATTCCGTGAATTGCTTCAACGATGGTTAGTGTATGCCGCCGGTTAAAGTCGCTTACGTTTACATTGAGATTATTTCCTTCTGCTTCCGCCGTATGCTTGCAAATCCACAGTTAGAGCGCGTTTTAGTTAATTCAGTGCAAGAGAGCACCCAGG GTTTGCATGTTTCCTACCCACACGTTCAATGTAAATAGATAGAAAAAGAAAACGGTTTTAAAGCGATCGTGCATTTGTTTGTGAGATACAAC TTTCCCTAAGCGCTTTCCACACTACCTGACCACCTCACAACACGACAAGTATTAA]


>consensus_8797#1 CCGGCCGGGCTAATCGTGGTGCGTGGTACGTTTCAACCGAGTTAAGGTGTAAAATTTGTT TATAAATCGCATACAATGGCTCGCGGTCACCAGAAGATCCAGTCGCAGCAGAAGGCGCAG GAAAAGGCTGCCAAGCTAAAGAAGCAGCAGGGGCACGGGCTGAGCGACCAGATGAAGGCG GCCCAGAAAGCGCTCGTGTTCTCCTGCGCGGTGTGCAAATCACAGATGCCCGACCCGAAA ACGTACAAGCAGCACTTTGAAAATAAACATCCCAAGAACGAACTCCCGGCCGAGCTGAAG GACGTTTAACAATCGGACGGGCGCACGCACGCTGGCGTGATATAGATTGGGGATGCCCGC TTATCCGAGAGGTTCGATTCCGTGAATTGCTTCAACGATGGTTAGTGTATGCCGCCGGTT AAAGTCGCTTACGTTTACATTGAGATTATTTCCTTCTGCTTCCGCCGTATGCTTGCAAAT CCACAGTTAGAGCGCGTTTTAGTTAATTCAGTGCAAGAGAGCACCCAGGGTTTGCATGTT TCCTACCCACACGTTCAATGTAAATAGATAGAAAAAGAAAACGGTTTTAAAGCGATCGTG CATTTGTTTGTGAGATACAACTTTCCCTAAGCGCTTTCCACACTACCTGACCACCTCACA ACACGACAAGTATTAA



consensusID : consensus_8797#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 654
fasta sequence
                              [CCGCGGACGCGTGGGCGCTAACGGCATAGGCGCTTACATTCACCATCCCCTTCCACCCGTTTTCTTCTCGCTTGCAGACGATGGCCCGTGGACACCAGAAGATCCAGTCGCAGCAGAAGGCGCAGGAAAAGGCTGCCAAGATGAAGAAGCAGCAGGGGCACGGGCTGAGCGACCAGATGAAGGCGGCCCAGAAAGCGCTCGTGTTCTCCTGCGCGGTGTGCAAATCACAGATGCCCGACCCGAAAACGTACAAGCAGCACTTTGAAAACAAACATCCCAAAAATGATCTCCCGGCAGAGCTGAAGGACGTCGTCTAAAGGCGAGCGGATGCGCAAGGGTGCACCACGCCGACCAACCACACACACTAACCCGCCAAAGGGGGTGATGCAGCAGACCGCTTTGGTTTGGGTGTACTTTTTTCCCTCCAGTTCTTTAAACAACCAGCAACCGGACACACACACACAGAGACGATTGTGGTTTTCGATTAATTTAATTTCGTATCGCGAAATTAAGTAGAGAATTTAGCGCACGCAACGTTAGGCCATGATGAGCATTGCTTCTGTTCGGTTTTCCTAGGACTACAGGCAGGCTACCAATCCCTTTATTATTCTGAGCAGCAAACTCTTTTGATAATGTGTAACGATAAAGTAAACT]

[+] EMBL BM576044             [CCGCGGACGCGTGGGCGCTAACGGCATAGGCGCTTACATTCACCATCCCCTTCCACCCGTTTTCTTCTCGCTTGCAGACGATGGCCCGTGGACACCAGAAGATCCAGTCGCAGCAGAAGGCGCAGGAAAAGGCTGCCAAGATGAAGAAGCAGCAGGGGCACGGGCTGAGCGACCAGATGAAGGCGGCCCAGAAAGCGCTCGTGTTCTCCTGCGCGGTGTGCAAATCACAGATGCCCGACCCGAAAACGTACAAGCAGCACTTTGAAAACAAACATCCCAAAAATGATCTCCCGGCAGAGCTGAAGGACGTCGTCTAAAGGCGAGCGGATGCGCAAGGGTGCACCACGCCGACCAACCACACACACTAACCCGCCAAAGGGGGTGATGCAGCAGACCGCTTTGGTTTGGGTGTACTTTTTTCCCTCCAGTTCTTTAAACAACCAGCAACCGGACACACACACACAGAGACGATTGTGGTTTTCGATTAATTTAATTTCGTATCGCGAAATTAAGTAGAGAATTTAGCGCACGCAACGTTAGGCCATGATGAGCATTGCTTCTGTTCGGTTTTCCTAGGACTACAGGCAGGCTACCAATCCCTTTATTATTCTGAGCAGCAAACTCTTTTGATAATGTGTAACGATAAAGTAAACT]


>consensus_8797#2 CCGCGGACGCGTGGGCGCTAACGGCATAGGCGCTTACATTCACCATCCCCTTCCACCCGT TTTCTTCTCGCTTGCAGACGATGGCCCGTGGACACCAGAAGATCCAGTCGCAGCAGAAGG CGCAGGAAAAGGCTGCCAAGATGAAGAAGCAGCAGGGGCACGGGCTGAGCGACCAGATGA AGGCGGCCCAGAAAGCGCTCGTGTTCTCCTGCGCGGTGTGCAAATCACAGATGCCCGACC CGAAAACGTACAAGCAGCACTTTGAAAACAAACATCCCAAAAATGATCTCCCGGCAGAGC TGAAGGACGTCGTCTAAAGGCGAGCGGATGCGCAAGGGTGCACCACGCCGACCAACCACA CACACTAACCCGCCAAAGGGGGTGATGCAGCAGACCGCTTTGGTTTGGGTGTACTTTTTT CCCTCCAGTTCTTTAAACAACCAGCAACCGGACACACACACACAGAGACGATTGTGGTTT TCGATTAATTTAATTTCGTATCGCGAAATTAAGTAGAGAATTTAGCGCACGCAACGTTAG GCCATGATGAGCATTGCTTCTGTTCGGTTTTCCTAGGACTACAGGCAGGCTACCAATCCC TTTATTATTCTGAGCAGCAAACTCTTTTGATAATGTGTAACGATAAAGTAAACT



consensusID : consensus_8797#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 575
fasta sequence
                              [GAGGTTACACACGACTTTGTACATATTCCGTTGATTTCCCCCNTNAACCTTTAACTAAAACGCACTTCCCGTACAAATTACGATGGCCCTGTGTGACACCAGAAGATCCAGTCGCAGCAGAAGGCGCAGGAAAAGGCTGCAATGATGAAGAAGCAGCAGTGTGCACTGGTGCTGAGCTGACCAGATGAAGNGCGGCCCAGAAAGCGCTCGTGTTCTCCTGCGCTGGTGTGCAAATCACAGATGCCCGACCCTGAAAAACGTACAAGCAGCACTTTGAAAACAAACATCCCAAAANATGATCTCCCGGCAGAGCTGAAGGACGTCGTCTAAAGGCGAGCGGATGCGCAAGGGTGCACCACGCCGACAACACACACACTAACCCGGCCAAAGGGGGTGATGCACGCCAGAGCGCTNATGGTAATGGAGTGTACTTTTATNTCCCTCCAGTNTCTTTAAACAACCAGCAACCGGGACACCACAACACACCAGAGANNCGACTTGGTGGTTNCGAGTTAATNTNANTTTCCGNTATCGCCGCANANATTACACGTNCGACACATTATAGCGCACGCNNA]

[+] EMBL AL695482             [GAGGTTACACACGACTTTGTACATATTCCGTTGATTTCCCCCNTNAACCTTTAACTAAAACGCACTTCCCGTACAAATTACGATGGCCCTGTGTGACACCAGAAGATCCAGTCGCAGCAGAAGGCGCAGGAAAAGGCTGCAATGATGAAGAAGCAGCAGTGTGCACTGGTGCTGAGCTGACCAGATGAAGNGCGGCCCAGAAAGCGCTCGTGTTCTCCTGCGCTGGTGTGCAAATCACAGATGCCCGACCCTGAAAAACGTACAAGCAGCACTTTGAAAACAAACATCCCAAAANATGATCTCCCGGCAGAGCTGAAGGACGTCGTCTAAAGGCGAGCGGATGCGCAAGGGTGCACCACGCCGACAACACACACACTAACCCGGCCAAAGGGGGTGATGCACGCCAGAGCGCTNATGGTAATGGAGTGTACTTTTATNTCCCTCCAGTNTCTTTAAACAACCAGCAACCGGGACACCACAACACACCAGAGANNCGACTTGGTGGTTNCGAGTTAATNTNANTTTCCGNTATCGCCGCANANATTACACGTNCGACACATTATAGCGCACGCNNA]


>consensus_8797#3 GAGGTTACACACGACTTTGTACATATTCCGTTGATTTCCCCCNTNAACCTTTAACTAAAA CGCACTTCCCGTACAAATTACGATGGCCCTGTGTGACACCAGAAGATCCAGTCGCAGCAG AAGGCGCAGGAAAAGGCTGCAATGATGAAGAAGCAGCAGTGTGCACTGGTGCTGAGCTGA CCAGATGAAGNGCGGCCCAGAAAGCGCTCGTGTTCTCCTGCGCTGGTGTGCAAATCACAG ATGCCCGACCCTGAAAAACGTACAAGCAGCACTTTGAAAACAAACATCCCAAAANATGAT CTCCCGGCAGAGCTGAAGGACGTCGTCTAAAGGCGAGCGGATGCGCAAGGGTGCACCACG CCGACAACACACACACTAACCCGGCCAAAGGGGGTGATGCACGCCAGAGCGCTNATGGTA ATGGAGTGTACTTTTATNTCCCTCCAGTNTCTTTAAACAACCAGCAACCGGGACACCACA ACACACCAGAGANNCGACTTGGTGGTTNCGAGTTAATNTNANTTTCCGNTATCGCCGCAN ANATTACACGTNCGACACATTATAGCGCACGCNNA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8797#0      ---CCGGCACACGACTTTGTACATATTC--CGTTGATTTCCCCCAAAA-CCTTTAACTAA 54
consensus_8797#2      CCGCGGACGCGTGGGCGCTAACGGCATAGGCGCTTACATTCACCATCC-CCTTCCACCCG 59
consensus_8797#3      GAGGTTACACACGACTTTGTACATATTC--CGTTGATTTCCCCCNTNAACCTTTAACTAA 58
consensus_8797#1      CCGGCCGGGCTAATCGTGGTGCGTGGTA--CGTTTCAACCGAGTTAAGGTGTAAAATTTG 58
                               *           *    *   ** *                 *   *    

consensus_8797#0      AACGCACTTCCCGTACAAATTACGATGGCCC-GTG-GACACCAGAAGATCCAGTCGCAGC 112
consensus_8797#2      TTTTCTTCTCGCTTGCAGA---CGATGGCCC-GTG-GACACCAGAAGATCCAGTCGCAGC 114
consensus_8797#3      AACGCACTTCCCGTACAAATTACGATGGCCCTGTGTGACACCAGAAGATCCAGTCGCAGC 118
consensus_8797#1      TTTATAAATCGCATACA-------ATGGCTC-GCG-GTCACCAGAAGATCCAGTCGCAGC 109
                              ** * * **       ***** * * * * **********************

consensus_8797#0      AGAAGGCGCAGGAAAAGGCTGCCAAGATGAAGAAGCAGCAAGG-GCACGGG--CTGAGC- 168
consensus_8797#2      AGAAGGCGCAGGAAAAGGCTGCCAAGATGAAGAAGCAGCAGGG-GCACGGG--CTGAGC- 170
consensus_8797#3      AGAAGGCGCAGGAAAAGGCTGCAATGATGAAGAAGCAGCAGTGTGCACTGGTGCTGAGCT 178
consensus_8797#1      AGAAGGCGCAGGAAAAGGCTGCCAAGCTAAAGAAGCAGCAGGG-GCACGGG--CTGAGC- 165
                      ********************** * * * ***********  * **** **  ****** 

consensus_8797#0      GACCAGATGAAGG-CGGCCCAGAAAGCGCTCGTGTTCTCCTGCGC-GGTGTGCAAATCAC 226
consensus_8797#2      GACCAGATGAAGG-CGGCCCAGAAAGCGCTCGTGTTCTCCTGCGC-GGTGTGCAAATCAC 228
consensus_8797#3      GACCAGATGAAGNGCGGCCCAGAAAGCGCTCGTGTTCTCCTGCGCTGGTGTGCAAATCAC 238
consensus_8797#1      GACCAGATGAAGG-CGGCCCAGAAAGCGCTCGTGTTCTCCTGCGC-GGTGTGCAAATCAC 223
                      ************  ******************************* **************

consensus_8797#0      AGATGCCCGACCC--GAAAACGTACAAGCAGCACTTTGAAAACAAACATCCCAAAAA-TG 283
consensus_8797#2      AGATGCCCGACCC--GAAAACGTACAAGCAGCACTTTGAAAACAAACATCCCAAAAA-TG 285
consensus_8797#3      AGATGCCCGACCCTGAAAAACGTACAAGCAGCACTTTGAAAACAAACATCCCAAAANATG 298
consensus_8797#1      AGATGCCCGACCC--GAAAACGTACAAGCAGCACTTTGAAAATAAACATCCCAAGAA-CG 280
                      *************   ************************** *********** *   *

consensus_8797#0      ATCTCCCGGCAGAGCTGAAGGACGTCGTCTAAAGGCGAGCGGATGCGCAAGGGTGCACCA 343
consensus_8797#2      ATCTCCCGGCAGAGCTGAAGGACGTCGTCTAAAGGCGAGCGGATGCGCAAGGGTGCACCA 345
consensus_8797#3      ATCTCCCGGCAGAGCTGAAGGACGTCGTCTAAAGGCGAGCGGATGCGCAAGGGTGCACCA 358
consensus_8797#1      AACTCCCGGCCGAGCTGAAGGACGTTTAACAATCGGACGGGCGCACGCACGCTGGCGTGA 340
                      * ******** **************     **  *   * *    **** *   **   *

consensus_8797#0      CGCCGACCAACCACACACACTAACCAG-CCAAAGGGGGTGATGCAG--CAGACCGTTT-- 398
consensus_8797#2      CGCCGACCAACCACACACACTAACCCG-CCAAAGGGGGTGATGCAG--CAGACCGCTT-- 400
consensus_8797#3      CGCCGACAA--CACACACACTAACCCGGCCAAAGGGGGTGATGCACGCCAGAGCGCTNA- 415
consensus_8797#1      TATAGATTGGGGATGCCCGCTTATCCG----AGAGGTTCGATTCCG--TGAATTGCTTCA 394
                          **      *  * * ** * * *    *  **   *** *       *  * *   

consensus_8797#0      -TGGT--TTGG-GTGTACT-----TTT--TTCCCTCCAGTT---CTTTAAACAACCAGCA 444
consensus_8797#2      -TGGT--TTGG-GTGTACT-----TTT--TTCCCTCCAGTT---CTTTAAACAACCAGCA 446
consensus_8797#3      -TGGTAATGGA-GTGTACT-----TTTATNTCCCTCCAGTNT--CTTTAAACAACCAGCA 466
consensus_8797#1      ACGATGGTTAGTGTATGCCGCCGGTTAAAGTCGCTTACGTTTACATTGAGATTATTTCCT 454
                        * *  *    ** * *      **    ** **   **     ** * *  *    * 

consensus_8797#0      ACCGG-ACAC-ACA-CACAC-ACAGAGACGATTG-TGGTCTTCGATTAATTTAATTTCGT 499
consensus_8797#2      ACCGG-ACAC-ACA-CACAC-A--GAGACGATTG-TGGTTTTCGATTAATTTAATTTCGT 499
consensus_8797#3      ACCGGGACACCACAACACACCAGAGANNCGACT--TGGTGGTTN--CGAGTTAATNTNAN 522
consensus_8797#1      TCTGC--TTCCGCCGTATGCTTGCAAATCCACAGTTAGAGCGCGTTTTAGTTAATTCAGT 512
                       * *     *  *   *  *     *  * *    * *          * *****     

consensus_8797#0      ATCGCGAAAT---TAAGTAGAGAATTTAGCGCACGCA-ACGTTAGGCCATGATGAGCATT 555
consensus_8797#2      ATCGCGAAAT---TAAGTAGAGAATTTAGCGCACGCA-ACGTTAGGCCATGATGAGCATT 555
consensus_8797#3      TTTCCGNTAT---CGCCGCANANATTACACGTNCGAC-ACATTATAGCGC-ACGCNNA-- 575
consensus_8797#1      GCAAGAGAGCACCCAGGGTTTGCATGTTTCCTACCCACACGTTCAATGTAAATAGATAGA 572
                                             **    *   *    ** **        *     *  

consensus_8797#0      GCTTCTGTTCGGTTTTCCTAGGACTACAGGCAGGCTACCAATCCCTTTATTATTCTGAGC 615
consensus_8797#2      GCTTCTGTTCGGTTTTCCTAGGACTACAGGCAGGCTACCAATCCCTTTATTATTCTGAGC 615
consensus_8797#3      ------------------------------------------------------------
consensus_8797#1      AAAAGAAAACGGTTTTAAAGCGATCGTGCATTTGTTTGTGAGATACAACTTTCCCTAAGC 632
                                                                                  

consensus_8797#0      AGCAAACTCTTTAAA-AAT-GTGTAACGATAAAGTAAACTAAATAAAGCCGTTGACATTT 673
consensus_8797#2      AGCAAACTCTTTTGATAAT-GTGTAACGATAAAGTAAACT-------------------- 654
consensus_8797#3      ------------------------------------------------------------
consensus_8797#1      GCTTTCCACACTACCTGACCACCTCACAACACGACAAGTATTAA---------------- 676
                                                                                  

consensus_8797#0      TTTGAATAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCC 713
consensus_8797#2      ----------------------------------------
consensus_8797#3      ----------------------------------------
consensus_8797#1      ----------------------------------------
                                                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)