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Anopheles gambiae
cluster # 8810 cluster # 8810       Sequences # 12       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8810#0 length = 1250 sequences # 6  
consensus_8810#1 length = 954 sequences # 5  
consensus_8810#2 length = 91 sequences # 1  

consensusID : consensus_8810#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1250
fasta sequence
                              [ATCGTCTTCGCAAGCACGCTCCAAAAGGCGAGATGTGGTACAGTAGGCTAATAATCCCGGTTAATAATAACAACTTCCCACGCAGCAGAAAGACGTGTGTGAACTCGTGAAGCAAAAACACGAAACGTAATGTGCAATTAATCTCTTCGCAATGGAAAAAACGAAACCCAGCAGCAACAGAAGCAGCAGAAGAAACTACATTTTATCGTAAATTGAATATGGAGGTTATTGATATGTTTATTTTTTTTATACCACTACCTTTTAAGTTTGCTATCGTAACCGTGAAACCATAGTTAGATATTTTGTTCTTTTTAAGCTTAATTTAGCTGTCCATTTTCCCTGTCCCCGGTGGTCCTTATTTCTTCGTGCATTTTAAAACGAATTTCCAATCGTACCTACAGTTCACTAGTAAACACAAAACAATAGTAAAGCCAATCGTATAACCTTTTAAACTTACACATTCCTATTGCGAAGAAATACGGCCCGAT-GGGAATGCAATGAAAACCCCAAACAAAGCCACTCACACCCATTCCAGTATGTATAGATTAGGGCAGAAGGGGGGAAAAACCCGCATTATGAAAACAGGAATCAACATTGTACGTTTTAAGCAATTTTAAAGAATCTTTGTACATATTTATGATATTTTTCTCATTCGAGCTAAGGTGATACCGTCAAACTCGTTGTTTAACCGCAACGCAAAATCAAACGCGTGTAGAAAATACATAGTAACATTCCTTTCGTACGTACGGCCTGGAGCAAAGAATTGTAGCTAAAATCGGAATCGGAAAAATCAGCTCCGAGCTCAGAAGATACGCATGACGAGCGAGTGCTACATCAAAGCGATTGTAGAGCGTCATAGCCAATGGAATAGCAGAAACAAACGGACTAATGAGCAGCAACAGAGCAAAACACAGATGTATGTAAGTGAAAAAAAAGGAAGATGAAATACCCGAGCCGTCATTTGTT-CCCCGGGGGCGATACGATTAGCTATTAGTG---GTAGTAGTAGTAGTAGTAGCGCGTGTAAAACGTAATGCGCGCCCAGGCACACTGTCTCCAACTCCATGCGGTTTGTCTGCTGTGAACATGTTCGAAATTGCAGGCCATTTTGTTAATAGCTTTTAGTTAGTAGGTATACTATCCCCATTTGCCTGCTCGGTTTAGTACTTCGCGACTGGAAAGATGGAAAGTCGCGCTCGGAAAGCGTAGGAAAATAGGACGACCAGCAATGAACGATTGGAACGACCGGATTG]

[+] EMBL BX625100             [ATCGTCTTCGCAAGCACGCTCCAAAAGGCGAGATGTGGTACAGTAGGCTAATAATCCCGGTTAATAATAACAACTTCCCACGCAGCAGAAAGACGTGTGTGAACTCGTGAAGCAAAAACACGAAACGTAATGTGCAATTAATCTCTTCGCAATGGAAAAAACGAAACCCAGCAGCAACAGAAGCAGCAGAAGAAACTACATTTTATCGTAAATTGAATATGGAGGTTATTGATATGTTTATTTTTTTTATACCACTACCTTTTAAGTTTGCTATCGTAACCGTGAAACCATAGTTAGATATTTTGTTCTTTTTAAGCTTAATTTAGCTGTCCATTTTCCCTGTCCCCGGTGGTCCTTATTTCTTCGTGCATTTTAAAACGAATTTCCAATCGTACCTACAGTTCACTAGTAAACACAAAACAATAGTAAAGCCAATCGTATAACCTTTTAAACTTACACATTCCTATTGCGAAGAAATACGGCCCGAT GGGAATGCAATGAAAACCCCAAACAAAGCCACTCACACCCATTCCAGTATGTATAGATTAGGGCAGAAGGGGGGAAAAACCCGCATTATGAAAACAGGAATCAACATTGTACGTTTTAAGCAATTTTAAAGAATCTTTGTACATATTTATGATATTTTTCTCATTCGAGCTAAGGTGATACCGTCAAACTCGTTGTTTAACCGCAACGCAAAATCAAACGCGTGTAGAAAATACATAGTAACATTCCTTTCGTACGTACGGNCTGGAGCAAATAATTGTAGCTAAAATCGGAATCGG AAAATCAGCTNCGAGCTCAG ACATACGCATGACGAGCGAGTGCTACATCAAAGCGATTGTANACCGTCATAGCCAAg                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX620464             [                                                                                                      ACTCGTGAAGCAAAAACACGAAACGTAATGTGCAATTAATCTCTTCGCAATGGAAAAAACGAAACCCAGCAGCAACAGAAGCAGCAGAAGAAACTACATTTTATCGTAAATTGAATATGGAGGTTATTGATATGTTTATTTTTTTTATACCACTACCTTTTAAGTTTGCTATCGTAACCGTGAAACCATAGTTAGATATTTTGTTCTTTTTAAGCTTAATTTAGCTGTCCATTTTCCCTGTCCCCGGTGGTCCTTATTTCTTCGTGCATTTTAAAACGAATTTCCAATCGTACCTACAGTTCACTAGTAAACACAAAACAATAGTAAAGCCAATCGTATAACCTTTTAAACTTACACATTCCTATTGCGAAGAAGTACGGCCCGAT GGGAATGCAATGAAAACCCCAAACAAAGCCACTCACACCCATTCCAGTATGTATAGATTAGGGCAGAAGGGGGGAAAAACCCGCATTATGAAAACAGGAATCAACATTGTACGTTTTAAGCAATTTTAAAGAATCTTTGTACATATTTATGATATTTTTCTCATTCGAGCTAAGGTGATACCGTC AACTCGTTGTTTAACCGCAACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX621655             [                                                                                                                                                                                                                                                                                           GAAACCATAGTTAGATATTTTGTTCTTTTTAAGCTTAATTTAGCTGTCCATTTTCCCTGTCCCCGGTGGTCCTTATTTCTTCGTGCATTTTAAAACGAATTTCCAATCGTACCTACAGTTCACTAGTAAACACAAAACAATAGTAAAGCCAATCGTATAACCTTTTAAACTTACACATTCCTATTGCGAAGAAATACGGCCCGAT GGGAATGCAATGAAAACCCCAAACAAAGCCACTCACACCCATTCCAGTATGTATAGATTAGGGCAGAAGGGGGGAAAAACCCGCATTATGAAAACAGGAATCAACATTGTACGTTTTAAGCAATTTTAAAGAATCTTTGTACATATTTATGATATTTTTCTCATTCGAGCTAAGGTGATACCGTCAAACTCGTTGTTTAACCGCAACGCAAAATCAAACGCGTGTAGAAAATACATAGTAACATTCCTTTCGTACGTACGGCCTGGAGCAAATAATTGTAGCTAAAATCGGAATCGGAAAAATCAGCTCCGAGCTCAGAACATACGCATGACGAGCGAGTGCTACATCAAAGCGATTGTAGACCGTCATAGCCAAGGGAATAGCAGAAACAAACGGACTAATGAGCAGCACAACAGCAAAACACAGATGTATGTAAGTG AAAAAAAGGAAGATGAAATACCCGAGCCGTCACTTGTT CCCCGGGGGCGATACGATTAGCTATTAGTGGTAGTAGTAGTAGTAGTAGTAGCGCGTGTAAAGCATAATGCGCGCCCAGGCACACTGTCTCCAACTCCATGCAGGGTGTCTG                                                                                                                                                                               ]
[+] EMBL BX619658             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGTCCGATNNCGAATGCCATGAAAACCCCAAACAAAGCCACTCACACCCATTCCAGTATGTATAGATTAGGGCAGAAGGGGGGGAAAACCCGCATTAAGAAAACAGGAATCAACATTGTACGTTTTAAGCAATTTTAAAGAATCTTTGTACATATTTATGATATTTTTCTCATTCGAGCTAAGGTGATACCGTCAAACTCGTTGTTTAACCGCAACGCAAAATCAAACGCGTGTAGAAAATACATAGTAACATTCCTTTCGTACGTACGGCCTGGAGCAAAGAATTGTAGCTAAAATCGGAATCGGAAAAATCAGCTCCGAGCTCAGAAGATACGCATGACGAGCGAGTGCTACATCAAAGCGATTGTAGAGCGTCATAGCCAATGGAATAGCAGAAACAAACGGACTAATGAGCAGCAACAGAGCAAAACACAGATGTATGTAAGTGAAAAAAAAGGAAGATGAAATACCCGAGCCGTCATTTGTTCCCCCGGGGGCGATACGATTAGCTATTAGTG   GTAGTAGTAGTAGTAGTAGCGCGTGTAAAACGTAATGCGCGCCCAGGCACACTGTCTCCAACTCCATGCGGTNTGTCTGCTGTGAACATGTT                                                                                                                                                                  ]
[+] EMBL BX620928             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CATTAAGAAAACAGGAATCAACATTGTACGTTTTAAGCAATTTTAAAGAATCTTTGTACATATTTATGATATTTTTCTCATTCGAGCTAAGGTGATACCGTCAAACTCGTTGTTTAACCGCAACGCAAAATCAAACGCGTGTAGAAAATACATAGTAACATTCCTTTCGTACGTACGGCCTGGAGCAAAGAATTGTAGCTAAAATCGGAATCGGAAAAATCAGCTCCGAGCTCAGAAGATACGCATGACGAGCGAGTGCTACATCAAAGCGATTGTAGAGCGTCATAGCCAATGGAATAGCAGAAACAAACGGACTAATGAGCAGCAACAGAGCAAAACACAGATGTATGTAAGTGAAAAAAAAGGAAGATGAAATACCCGAGCCGTCATTTGTT CCCCGGGGGCGATACGATTAGCTATTAGTG   GTAGTAGTAGTAGTAGTAGCGCGTGTAAAACGTAATGCGCGCCCAGGCACACTGTCTCCAACTCCATGCGGTTTGTCTGCTGTGAACATGTTCGAAATTGCAGGCCATTTTGTTAATAGCTTTTAGTTAGTAGGTATACTATCCCCATTTGCCTGCTCGGTTTAGTACTTCGCGACTGGAAAGATGGAAAGTCGCGC                                                         ]
[+] EMBL BX626512             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATTAAGAAAACAGGAATCAACATTGTACGTTTTAAGCAATTTTAAAGAATCTTTGTACATATTTATGATATTTTTCTCATTCGAGCTAAGGTGATACCGTCAAACTCGTTGTTTAACCGCAACGCAAAATCAAACGCGTGTAGAAAATACATAGTAACATTCCTTTCGTACGTACGGCCTGGAGCAAAGAATTGTAGCTAAAATCGGAATCGGAAAAATCAGCTCCGAGCTCAGAAGATACGCATGACGAGCGAGTGCTACATCAAAGCGATTGTAGAGCGTCATAGCCAATGGAATAGCAGAAACAAACGGACTAATGAGCAGCAACAGAGCAAAACACAGATGTATGTAAGTGAAAAAAAAGGAAGATGAAATACCCGAGCCGTCATTTGTT CCCCGGGGGCGATACGATTAGCTATTAGTG   GTAGTAGTAGTAGTAGTAGCGCGTGTAAAACGTAATGCGCGCCCAGGCACACTGTCTCCAACTCCATGCGGTTTGTCTGCTGTGAACATGTTCGAAATTGCAGGCCATTTTGTTAATAGCTTTTAGTTAGTAGGTATACTATCCCCATTTGCCTGCTCGGTTTAGTACTTCGCGACTGGAAAGATGGAAAGTCGCGCTCGGAAAGCGTAGGAAAATAGGACGACCAGCAATGAACGATTGGAACGACCGGATTG]


>consensus_8810#0 ATCGTCTTCGCAAGCACGCTCCAAAAGGCGAGATGTGGTACAGTAGGCTAATAATCCCGG TTAATAATAACAACTTCCCACGCAGCAGAAAGACGTGTGTGAACTCGTGAAGCAAAAACA CGAAACGTAATGTGCAATTAATCTCTTCGCAATGGAAAAAACGAAACCCAGCAGCAACAG AAGCAGCAGAAGAAACTACATTTTATCGTAAATTGAATATGGAGGTTATTGATATGTTTA TTTTTTTTATACCACTACCTTTTAAGTTTGCTATCGTAACCGTGAAACCATAGTTAGATA TTTTGTTCTTTTTAAGCTTAATTTAGCTGTCCATTTTCCCTGTCCCCGGTGGTCCTTATT TCTTCGTGCATTTTAAAACGAATTTCCAATCGTACCTACAGTTCACTAGTAAACACAAAA CAATAGTAAAGCCAATCGTATAACCTTTTAAACTTACACATTCCTATTGCGAAGAAATAC GGCCCGATGGGAATGCAATGAAAACCCCAAACAAAGCCACTCACACCCATTCCAGTATGT ATAGATTAGGGCAGAAGGGGGGAAAAACCCGCATTATGAAAACAGGAATCAACATTGTAC GTTTTAAGCAATTTTAAAGAATCTTTGTACATATTTATGATATTTTTCTCATTCGAGCTA AGGTGATACCGTCAAACTCGTTGTTTAACCGCAACGCAAAATCAAACGCGTGTAGAAAAT ACATAGTAACATTCCTTTCGTACGTACGGCCTGGAGCAAAGAATTGTAGCTAAAATCGGA ATCGGAAAAATCAGCTCCGAGCTCAGAAGATACGCATGACGAGCGAGTGCTACATCAAAG CGATTGTAGAGCGTCATAGCCAATGGAATAGCAGAAACAAACGGACTAATGAGCAGCAAC AGAGCAAAACACAGATGTATGTAAGTGAAAAAAAAGGAAGATGAAATACCCGAGCCGTCA TTTGTTCCCCGGGGGCGATACGATTAGCTATTAGTGGTAGTAGTAGTAGTAGTAGCGCGT GTAAAACGTAATGCGCGCCCAGGCACACTGTCTCCAACTCCATGCGGTTTGTCTGCTGTG AACATGTTCGAAATTGCAGGCCATTTTGTTAATAGCTTTTAGTTAGTAGGTATACTATCC CCATTTGCCTGCTCGGTTTAGTACTTCGCGACTGGAAAGATGGAAAGTCGCGCTCGGAAA GCGTAGGAAAATAGGACGACCAGCAATGAACGATTGGAACGACCGGATTG



consensusID : consensus_8810#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 954
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCAATTGGAGAAAAACAATCGTACGCTGTGTATTGGTGCACTCTCGGGAAGTATTATTTAATTAATAATGTTGTTTTCCGGCACCAGTGCTGCCGTAGAGAGTACAACCATCTAAAGTCAACGTGCGCCGTAATCAAACGAAACATTTGGATAAACTCCCCCTCCTTCCAAAGCCAATGTCCAATCACTATGATATTCCATCGTGGGCCGGAAAGCCACCGACCGGTCTGCATCTGGATGTGATGAAGGAGGACAAGCTCGTCCAGAAGCTGATGATCGACGAAAAGCGATGCTACCTGTTCGGGCGTAATCCGCAGATGAACGACTTCTGCATCGACCATGCTTCCTGTTCGCGGGTCCACGCCGCCTTCGTCTACCACAAGCATCTTCACATCGCTTACCTAGTCGACCTCGGCAGCACGCACGGCACGTTCATCGGTTCGGTCCGCCTGGAGGCCAACAAACCGACCCAGCTGCAGATCAACAGCCAGTTTAGCTTCGGTGCCTCCACCCGCCACTACATACTGCGCGAGCGGCCAACCGTCGGGTCGCGCACCAACATCATGGAGGACATACCGATGATGGACATCAGCGACGGCACCTTTCTCGGGTT-GCCCGAAAGTCAAACCGAGCTCGATAATCTAACCGAATACAACACGGCCCACAATCGGCGCATCTCGATGCTCGGCATCGCGGACGACGGTGGCAGTGTCAGTGGGGCGGGCGGTGCTCGCGGACTCGGGCAGTACCGGCGGCAGCTCGTACAA-AAAAACAAGCGCAACAAGCGGAAAGGGGTCGCGTTCAACGAGGACGAAATCATCATCAACCCGGAAGACATCGATCCATCAATCGGCCGGTTCCGCAATCTCATCCAGTCCACCGTCGTGCCGGTGTCGGCCAAGCGTGCCAAGATGGA]

[+] EMBL BM634946             [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCAATTGGAGAAAAACAATCGTACGCTGTGTATTGGTGCACTCTCGGGAAGTATTATTTAATTAATAATGTTGTTTTCCGGCACCAGTGCTGCCGTAGAGAGTACAACCATCTAAAGTCAACGTGCGCCGTAATCAAACGAAACATTTGGATAAACTCCCCCTCCTTCCAAAGCCAATGTCCAATCACTATGATATTCCATCGTGGGCCGGAAAGCCACCGACCGGTCTGCATCTGGATGTGATGAAGGAGGACAAGCTCGTCCAGAAGCTGATGATCGACGAAAAGCGATGCTACCTGTTCGGGCGTAATCCGCAGATGAACGACTTCTGCATCGACCATGCTTCCTGTTCGCGGGTCCACGCCGCCTTCGTCTACCACAAGCATCTTCACATCGCTTACCTAGTCGACCTCGGCAGCACGCACGGCACGTTCATCGGTTCGGTCCGCCTGGAGGCCAACAAACCGACCCAGCTGCAGATCAACAGCCAGTTTAGCTTCGGTGCCTCCACCCGCCACTACATACTGCGCGAGCGGCCAACCGTCGGGTCGCGCACCAACATCATGGAGGACATACC                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM629512             [                                               ccgAAACAATCGTACGCTGTGTATTGGTGCACTCTCGGGAAGTATTATTTAATTAATAATGTTGTTTTCCGGCACCAGTGCTGCCGTAGAGAGTACAACCATCTAAAGTCAACGTGCGCCGTAATCAAACGAAACATTTGGATAAACTCCCCCTCCTTCCAAAGCCAATGTCCAATCACTATGATATTCCATCGTGGGCCGGAAAGCCACCGACCGGTCTGCATCTGGATGTGATGAAGGAGGACAAGCTCGTCCAGAAGCTGATGATCGACGAAAAGCGATGCTACCTGTTCGGGCGTAATCCGCAGATGAACGACTTCTGCATCGACCATGCTTCCTGTTCGCGGGTCCACGCCGCCTTCGTCTACCACAAGCATCTTCACATCGCTTACCTAGTCGACCTCGGCAGCACGCACGGCACGTTCATCGGTTCGGTCCGCCTGGAGGCCAACAAACCGACCCAGCTGCAGATCAACAGCCAGTTTAGCTTCGGTGCCTCCACCCGCCACTACATACTGCGCGAGCGGCCAACCGTCGGGTCGCGCACCAACATCATGGAGGACATACCGATGATGGACATCAGCGACGGCACCTTTCTCGGGTTGGCCCGAAA                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS08PU9             [                                                                 GTGTATTGGTGCACTCTCGGGAAGTATTATTTAATTAATAATGTTGTTTTCCGGCACCAGCGCTGCCGTAGAGAGTACAACCATCTAAAGTCAACGTGCGCCGTAATCAAACGAAACATTTGGATAAACTCCCCCTCCTTCCAAAGCCAATGTCCAATCACTATGATATTCCATCTTGGGCCGGAAAGCCACCGACCGGTCTGCATCTGGATGTGATGAAGGAGGACAAGCTCGTCCAGAAGCTGATGATCGACGAAAAGCGATGCTACCTGTTCGGGCGTAATCCGCAGATGAACGACTTCTGCATTGACCATGCTTCCTGTTCGCGGGTCCACGCCGCCTTCGTCTACCACAAGCATCTTCACATCGCTTACCTAGTCGACCTCGGCAGCACGCACGGCACGTTCATCGGTTCGGTCCGCCTGGAGGCCAACAAACCGACCCAGCTGCAGATCAACAGCCAGTTTAGCTTCGGTGCCTCCACCCGCCACTACATACTGCGCGAGCGGCCAACCGTCGGGTCGCGCACCAAC                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM617867             [                                                                     ccgGGTGCACTCTCGGGAAGTATTATTTAATTAATAATGTTGTTTTCCGGCACCAGTGCTGCCGTAGAGAGTACAACCATCTAAAGTCAACGTGCGCCGTAATCAAACGAAACCTTTGGATAAACTCCCCCTCCTTCCAAAGCCAATGTCCAATCACTATGATATTCCATCTTGGGCCGGAAAGCCACCGACCGGTCTGCATCTGGATGTGATGAAGGAGGACAAGCTCGTCCAGAAGCTGATGATCGACGAAAAGCGATGCTACCTGTTCGGGCGTAATCCGCAGATGAACGACTTCTGCATCGACCATGCTTCCTGTTCGCGGGTCCACGCCGCCTTCGTCTACCACAAGCATCTTCACATCGCTTACCTAGTCGACCTCGGCAGCACGCACGGCACGTTCATCGGTTCGGTCCGCCTGGAGGCCAACAAACCGACCCAGCTGCAGATCAACAGCCAGTTTAGCTTCGGTGCCTCCACCCGCCACTACATACTGCGCGAGCGGCCAACCGTCGGGTCGCGCACCAACATCATGGAGGACATACCGATGATGGACATCAGCGACGGCACCTTTCTCGGGTT GCCCGAAAGTCAAACCGAGCTCGATAATCTAACCGAATACAACACGGCCCACAATCGGCGCATCTCGATGCTCGGCATCGCGGACGACGGTGGCAGTGTCAGTGGGGCGGGCGGTGCTCGCGGACTCGGGCAGTACCGGCGGCAGCTCGTACAA AAAAAC                                                                                                                                               ]
[+] EMBL BM603968             [                                                                                                                                                                                                                                                                                                                                                                     ccgCGACTTCTGCATCGACCATGCTTCCTGTTCGCGGGTCCACGCCGCCTTCGTCTACCACAAGCATCTTCACATCGCTTACCTAGTCGACCTCGGCAGCACGCACGGCACGTTCATCGGTTCGGTCCGCCTGGAGGCCAACAAACCGACCCAGCTGCAGATCAACAGCCAGTTTAGCTTCGGTGCCTCCACCCGCCACTACATACTGCGCGAGCGGCCAACCGTCGGGTCGCGCACCAACATCATGGAGGACATACCGATGATGGACATCAGCGACGGCACCTTTCTCGGGTT GCCCGAAAGTCAAACCGAACTCGATAATCTAACCGAATACAATACGGCCCACAATCGGCGCATCTCGATGCTCGGCATCGCGGACGACGGTGGCAGTGTCGGCGGGGCGGGCGGTGCCGGCGGAC CGGGCAGTACCGGCGGCAGCTCGTACAAGAAGAACAAGCGCAACAAGCGGAAAGGGGTCGCGTTCAACGAGGACGAAATCATCATCAACCCGGAAGACATCGATCCATCAATCGGCCGGTTCCGCAATCTCATCCAGTCCACCGTCGTGCCGGTGTCGGCCAAGCGTGCCAAGATGGA]


>consensus_8810#1 CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCAATTGGAGAAAAACAATCGT ACGCTGTGTATTGGTGCACTCTCGGGAAGTATTATTTAATTAATAATGTTGTTTTCCGGC ACCAGTGCTGCCGTAGAGAGTACAACCATCTAAAGTCAACGTGCGCCGTAATCAAACGAA ACATTTGGATAAACTCCCCCTCCTTCCAAAGCCAATGTCCAATCACTATGATATTCCATC GTGGGCCGGAAAGCCACCGACCGGTCTGCATCTGGATGTGATGAAGGAGGACAAGCTCGT CCAGAAGCTGATGATCGACGAAAAGCGATGCTACCTGTTCGGGCGTAATCCGCAGATGAA CGACTTCTGCATCGACCATGCTTCCTGTTCGCGGGTCCACGCCGCCTTCGTCTACCACAA GCATCTTCACATCGCTTACCTAGTCGACCTCGGCAGCACGCACGGCACGTTCATCGGTTC GGTCCGCCTGGAGGCCAACAAACCGACCCAGCTGCAGATCAACAGCCAGTTTAGCTTCGG TGCCTCCACCCGCCACTACATACTGCGCGAGCGGCCAACCGTCGGGTCGCGCACCAACAT CATGGAGGACATACCGATGATGGACATCAGCGACGGCACCTTTCTCGGGTTGCCCGAAAG TCAAACCGAGCTCGATAATCTAACCGAATACAACACGGCCCACAATCGGCGCATCTCGAT GCTCGGCATCGCGGACGACGGTGGCAGTGTCAGTGGGGCGGGCGGTGCTCGCGGACTCGG GCAGTACCGGCGGCAGCTCGTACAAAAAAACAAGCGCAACAAGCGGAAAGGGGTCGCGTT CAACGAGGACGAAATCATCATCAACCCGGAAGACATCGATCCATCAATCGGCCGGTTCCG CAATCTCATCCAGTCCACCGTCGTGCCGGTGTCGGCCAAGCGTGCCAAGATGGA



consensusID : consensus_8810#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 91
fasta sequence
                              [GGTCCACTGCTGCTGGCACCGGCGTGCATTCTGCTCTCGTCCCAGGTGGGAGAGTTCGGTGTGATATCGAACTCGCGGCTCATCACCACGT]

[+] EMBL CNS08IE4             [GGTCCACTGCTGCTGGCACCGGCGTGCATTCTGCTCTCGTCCCAGGTGGGAGAGTTCGGTGTGATATCGAACTCGCGGCTCATCACCACGT]


>consensus_8810#2 GGTCCACTGCTGCTGGCACCGGCGTGCATTCTGCTCTCGTCCCAGGTGGGAGAGTTCGGT GTGATATCGAACTCGCGGCTCATCACCACGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8810#0      ATCGTCTTCGCAAGCACGCTCCAAAAGGCGAGATGTGGTACAGTAGGCTAATAATCCCGG 60
consensus_8810#2      ------------------------------------------------------------
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      TTAATAATAACAACTTCCCACGCAGCAGAAAGACGTGTGTGAACTCGTGAAGCAAAAACA 120
consensus_8810#2      ------------------------------------------------------------
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      CGAAACGTAATGTGCAATTAATCTCTTCGCAATGGAAAAAACGAAACCCAGCAGCAACAG 180
consensus_8810#2      ------------------------------------------------------------
consensus_8810#1      ------------------------------------------------------------
                                                                                  

consensus_8810#0      AAGCAGCAGAAGAAACTACATTTTATCGTAAATTGAATATGGAGGTTATTGATATGTTTA 240
consensus_8810#2      ------------------------------------------------------------
consensus_8810#1      --------------------------------------CCGCCCACGCGTCCGCCCACGC 22
                                                                                  

consensus_8810#0      TTTTTTTTATACCACTACCTTTTAAGTTTGCTATCGTAACCGTGAAACCATAGTTAGATA 300
consensus_8810#2      ------------------------------------------------------------
consensus_8810#1      GTCCGCCCACGCGTCCGCAATTGGAGAAAAACAATCGTACGCTGTGTATTGGTGCACTCT 82
                                                                                  

consensus_8810#0      TTTTGTTCTTTTTAAGCTTAATTTAGCTGTCCATTTTCCCTGTCCCCGGTGGTCCTTATT 360
consensus_8810#2      ---------------------------GGTCCACTGCTGCTGGCACCGGCGTGCATTCTG 33
consensus_8810#1      CGGGAAGTATTATTTAATTAATAATGTTGTTTTCCGGCACCAGTGCTGCCGTAGAGAGTA 142
                                                  **         *     * *  *       * 

consensus_8810#0      TCTTCGTGCATTTTAAAACGAATTTCCAATCGTACCTACAGTTCACTAGTAAACACAAAA 420
consensus_8810#2      CTCTCGTCCCAGGTGGGA-GAGTTCGGTGTGATATCG--AACTCGCGGCTCATCACCACG 90
consensus_8810#1      CAACCATCTAAAGTCAACGTGCGCCGTAATCAAACGA--AACATTTGGATAAACTCCCCC 200
                          * *      *               *   *     *         * * * *    

consensus_8810#0      CAATAGTAAAGCCAATCGTATAACCTTTTAAACTTACACATTCCTATTGCGAAGAAATAC 480
consensus_8810#2      T----------------------------------------------------------- 91
consensus_8810#1      TCCTTCCAAAGCCAATGTCCAATCACTATGATATTCCATCGTGGGCCGGAAAGCCACCGA 260
                                                                                  

consensus_8810#0      GGCCCGATGGGAATGCAATGAAAACCCCAAACAAAGCCACTCACACCCATTCCAGTATGT 540
consensus_8810#2      ------------------------------------------------------------
consensus_8810#1      CCGGTCTGCATCTGGATGTGATGAAGGAGGACAAGCTCGTCCAGAAGCTGATGATCGACG 320
                                                                                  

consensus_8810#0      ATAGATTAGGGCAGAAGGG-GGGAAAAACCCGCATTATGAAAACAGGAATCAACATTGTA 599
consensus_8810#2      ------------------------------------------------------------
consensus_8810#1      AAAAGCGATGCTACCTGTTCGGGCGTAATCCGCAGATGAACGACTTCTGCATCGACCATG 380
                                                                                  

consensus_8810#0      CGTTTTAAGCAATTTTAAAGAATCTTTGTACATATTTATGATATTTTTCTCATTCGAGCT 659
consensus_8810#2      ------------------------------------------------------------
consensus_8810#1      CTTCCTGTTCGCGGGTCCACGCCGCCTTCGTCTACCACAAGCATCTTCACATCGCTTACC 440
                                                                                  

consensus_8810#0      AAGGTGATACCGTCAAACTCGTTGTTTAACCGCAACGCAAAATCAAACGCGTGTAGAAAA 719
consensus_8810#2      ------------------------------------------------------------
consensus_8810#1      TAGTCGACCTCGGCAGCACGCACGGCACGTTCATCGGTTCGGTCCGCCTGGAGGCCAACA 500
                                                                                  

consensus_8810#0      TACATAGTAACATTCCTTTCGTACGTACGGCCTGGAGCAAAGAATTGTAGCTAAAATCGG 779
consensus_8810#2      ------------------------------------------------------------
consensus_8810#1      AACCGACCCAGCTGCAGATCAACAGCCAGTTTAGCTTCGGTGCCTCCACCCGCCACTACA 560
                                                                                  

consensus_8810#0      AATCGGAAAAATCAGCTCCGAGCTCAGAAGATACGCATGACGAGCGAGTGCTACATCAAA 839
consensus_8810#2      ------------------------------------------------------------
consensus_8810#1      TACTGCGCGAGCGGCCAACCGTCGGGTCGCGCACCAACATCATGGAGGACATACCGATGA 620
                                                                                  

consensus_8810#0      GCGATTGTAGAGCGTCATAGCCAATGGAATAGCAGAAACAAACGGACTAATGAGCAGCAA 899
consensus_8810#2      ------------------------------------------------------------
consensus_8810#1      TGGACATCAGCGACGGCACCTTTCTCGGGTTGCCCGAAAGTCAAACCGAGCTCGATAATC 680
                                                                                  

consensus_8810#0      CAGAGCAAAACACAGATGTATGTAAGTGAAAAAAAAGGAAGATGAAATACCCGAGCCGTC 959
consensus_8810#2      ------------------------------------------------------------
consensus_8810#1      TAACCGAATACAACACGGCCCACAATCGGCGCATCTCGATGCTCGGCATCGCGGACGACG 740
                                                                                  

consensus_8810#0      ATTTGTTCCCCGGGGGCGATACGATTAGCTATTAGTGGTAGTAGTAGTAGTAGTAGCGCG 1019
consensus_8810#2      ------------------------------------------------------------
consensus_8810#1      GTGGCAGTGTCAGTGGGGCGGGCGGTGCTCGCGGACTCGGGCAGTACCGGCGGCAGCTCG 800
                                                                                  

consensus_8810#0      TGTAAAACGTAATGCGCGCCCAGGCACACTGTCTCCAACTCCATGCGGTTTGTCTGCTGT 1079
consensus_8810#2      ------------------------------------------------------------
consensus_8810#1      TACAAAAAAACAAGCGCAACAAGCGGAAAGGGGTCGCGTTCAACGAGGACGAAAT--CAT 858
                                                                                  

consensus_8810#0      GAACATGTTCGAAATTGCAGGCCATTTTGTTAATAGCTTTTAGTTAGTAGGTATACTATC 1139
consensus_8810#2      ------------------------------------------------------------
consensus_8810#1      CATCAACCCGGAAGACATCGATCCATCAATCGGCCGGTTCCGCAATCTCATCCAGTCCAC 918
                                                                                  

consensus_8810#0      CCCATTTGCCTGCTCGGTTTAGTACTTCGCGACTGGAAAGATGGAAAGTCGCGCTCGGAA 1199
consensus_8810#2      ------------------------------------------------------------
consensus_8810#1      CGTCGTGCCGGTGTCGGCCAAGCGTGCCAAGATGGA------------------------ 954
                                                                                  

consensus_8810#0      AGCGTAGGAAAATAGGACGACCAGCAATGAACGATTGGAACGACCGGATTG 1250
consensus_8810#2      ---------------------------------------------------
consensus_8810#1      ---------------------------------------------------
                                                                         




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)