cluster # 8813

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Anopheles gambiae
cluster # 8813 cluster # 8813 Sequences # 12 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8813#0 length = 1040 sequences # 9
consensus_8813#1 length = 522 sequences # 1

consensus_8813#2 length = 452 sequences # 1
consensus_8813#3 length = 314 sequences # 1

consensusID : consensus_8813#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1040
fasta sequence

                              [CCGCCCACGCGTCCGGTGCACAGTGTTAGACGCGCTTCTGATTAGCTCCTCGCCGCCATAGAACAGCCCAGTTTTGCGTGTTAATTTGCGTGACATTTTCACAAAGACACAGCAATATGGAGCGCTACCTACGGTTTTACATAAAATTCCAAGGATACATGATCGGCGGGTTTACGCTGCTGCTGTCCATACTGATGACACTGGTGATTTTCGAATCGAACGATCCGTACTATCCGATGGAGTTTTATTATAACTACCGCTTCATGGGCACGACGGCACTGGTGCTGGGCATATTCTGGTTCATCGCTGGCGTTACCTTTATGTACGGAGTGCACTATGAGATCAAGCAGTGTCTGCTGCCGTTCGCGCTGCTCTATCTGGTGGATTTGGCGTTGCTAGCCATTCGGGATATCGTGATGATATGGCACGATCGACGCTGGTACACGATGGTGTTTGTGAACATTCCCACGCTGCTGGCCGTGCTGTACATTACTTGCTATCTGTTCATGACGCTTGTCGCACTGGGCCGGCTGTTCAGCACCGATCCGAAACCACAAAC-GGGTGACAATTTTGTACGGTTCAGCAACGGCATCGCCAATCCGGTTGCACTCGCCGAGGAGGAGGAGGCGGCACTCGTGGCGG-AATAGGTGCGATCCTCTTACCCTACCATAACCTCCTCCCTTCTGTCTAAGCATCCCTGCTGCGTCTCTGCTGTGTGGTCTTGTGTGTGCTATCAGTTTGTGTATGTTTAGACTGTTTCTGTGTGTGTG--TTCCTGTTTGCATTTCCTAAGCTTGCTTGCATGTCTCATCAACAGTGCTTGCCCGAATGAACTAATCGTTCATGCTTTTACGTTATCGCTTCCCAAGGGTTTGCGTGTGTGTGTGTCCTTACAAATGGTGTGGAACTGTTAGCAAACACAGTGCGCTTCCCAACATCGCATAACAATCGCATTACATTCGTTCTGTTAATAATAACCGTGTTAATAAAATGATAAGTGCTTTAAAAGGGAAAAAAAAAAAAAAAAAAAAAAGGCCACATG]

[+] EMBL BM617955             [CCGCCCACGCGTCCGGTGCACAGTGTTAGACGCGCTTCTGATTAGCTCCTCGCCGCCATAGAACAGCCCAGTTTTGCGTGTTAATTTGCGTGACATTTTCACAAAGACACAGCAATATGGAGCGCTACCTACGGTTTTACATAAAATTCCAAGGATACATGATCGGCGGGTTTACGCTGCTGCTGTCCATACTGATGACACTGGTGATTTTCGAATCGAACGATCCGTACTATCCGATGGAGTTTTATTATAACTACCGCTTCATGGGCACGACGGCACTGGTGCTGGGCATATTCTGGTTCATCGCTGGCGTTACCTTTATGTACGGAGTGCACTATGAGATCAAGCAGTGTCTGCTGCCGTTCGCGCTGCTCTATCTGGTGGATTTGGCGTTGCTAGCCATTCGGGATATCGTGATGATATGGCACGATCGACGCTGGTACACGATGGTGTTTGTGAACATTCCCACGCTGCTGGCCGTGCTGTACATTACTTGCTATCTGTTCATGACGCTTGTCGCACTGGGCCGGCTGTTCAGCACCGATCCGAAACCACAAAC GGGTGACAATTTTGTACGGTTCAGCAACGGCATCGCCAATCCGGTTGCACTCGCCGAGGAGGAGGAGGCGGCACTCGTGGCGG AATAGGTGCGATCCTCTTACCCTACCATAACCTCCTCCCTTCTGTCTAAGCATCCCTGCTGCGT                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM595916             [CCGCCCACGCGTCCGGTGCACAGTGTTAGACGCGATTCTGATTAGCTCCTCGCCGCCATAGAACAGCCCAGTTTTGCGTGTTTATTTGCGTGATATTTTCACAAAGACACAGCAATATGGAGCGCTACCTACGGTTTTACATAAAATTCCAAGGATACATGATCGGCGGGTTTACGCTGCTGCTGTCCATACTGATGACGCTGGTGATTTTCGAATCGAACGATCCGTACTATCCGATGGAGTTTTATTATAACTACCGCTTCATGGGCACGACGGCACTGGTGCTGGGCATATTCTGGTTCATCGCTGGCGTTACCTTTATGTACGGAGTGCACTATGAGATCAAGCAGTGTCTGCTGCCGTTTGCGCTGCTCTATCTGGTGGATTTGGCGTTGCTAGCCATCCGGGATATCGTGATGATATGGCACGATCGACGCTGGTACACGATGGTGTTCGTGAACATTCCCACGCTGCTGGCCGTGTTGTACATTACTTGCTATCTGTTCATGACGCTGGTCGCGCTGGGCCGGCTGTTCAGCACCGATCCGAAACCACAAAC GGGTGACAATTTTGTACGGTTCAGCAACGGCATCGCCAATCCGGTTGCACTCGCC   GAGGAGGAGGCGGCACTCGTGGCGG AATAGGTGCGATCCTCTTACCCTAtt                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM595945             [            CCGGTGCACAGTGTTAGACGCGATTCTGATTAGCTCCTCGCCGCCATAGAACAGCCCAGTTTTGCGTGTTTATTTGCGTGATATTTTCACAAAGACACAGCAATATGGAGCGCTACCTACGGTTTTACATAAAATTCCAAGGATACATGATCGGCGGGTTTACGCTGCTGCTGTCCATACTGATGACGCTGGTGATTTTCGAATCGAACGATCCGTACTATCCGATGGAGTTTTATTATAACTACCGCTTCATGGGCACGACGGCACTGGTGCTGGGCATATTCTGGTTCATCGCTGGCGTTACCTTTATGTACGGAGTGCACTATGAGATCAAGCAGTGTCTGCTGCCGTTTGCGCTGCTCTATCTGGTGGATTTGGCGTTGCTAGCCATCCGGGATATCGTGATGATATGGCACGATCGACGCTGGTACACGATGGTGTTCGTGAACATTCCCACGCTGCTGGCCGTGTTGTACATTACTTGCTATCTGTTCATGACGCTGGTCGCGCTGGGCCGGCTGTTCAGCACCGATCCGAAACCACAAAC GGGTGACAATTTTGTACGGTTCAGCAACGGCATCGCCAATCCGGTTGCACTCGCC   GAGGAGGAGGCGGCACTCGTGGCGGAAATAAGTGCGATCCTCTT                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM575812             [                            ccgGCGCTTCTGATTAGCTCCTCGCCGCCATAGAACAGCCCAGTTTTGCGTGTTAATTTGCGTGACATTTTCACAAAGACACAGCAATATGGAGCGCTACCTACGGTTTTACATAAAATTCCAAGGATACATGATCGGCGGGTTTACGCTGCTGCTGTCCATACTGATGACACTGGTGATTTTCGAATCGAACGATCCGTACTATCCGATGGAGTTTTATTATAACTACCGCTTCATGGGCACGACGGCACTGGTGCTGGGCATATTCTGGTTCATCGCTGGCGTTACCTTTATGTACGGAGTGCACTATGAGATCAAGCAGTGTCTGCTGCCGTTCGCGCTGCTCTATCTGGTGGATTTGGCGTTGCTAGCCATTCGGGATATCGTGATGATATGGCACGATCGACGCTGGTACACGATGGTGTTTGTGAACATTCCCACGCTGCTGGCCGTGCTGTACATTACTTGCTATCTGTTCATGACGCTTGTCGCACTGGGCCGGCTGTTCAGCACCGATCCGAAACCACAAAC GGGTGACAATTTTGTACGGTTCAGCAACGGCATCGCCAATCCGGTTGCACTCGCCGAGGAGGAGGAGGCGGCACTCGTGGCGG AATAGGTGCGATCCTCTTACCCTACCATAAC                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CNS09N0O             [                                                                                                                           GCTA CTACGGTTTTACATAAAATTCCAAGGAAACATGATCGGCGGGTTTACGCTGCTGCTGTCCATACTGATGACGATGGTGATTTTCGAATCGAACGATCCGTACTATCCGATGGAGTTTTATTATAACTACCGCTTCATGGGCACGACGGGACTGGTGCTGGGCATATTCTGGTTCATTGCTGGCGTTACCTTTATGTACGGAGTGCACTATGAGATCAAGCAGTTTCTGCTGCCGTTCGCGCTGCTCTATCTGGTGGATTTGGCATTGCTAGCCATCCGGGATATCGTGATGATATGGCACGATCGACGCTGGTACACGATGGTGTTTGTGAACATTCCCATGCTGCTGGCCGTGCTGTACATTACTTGTTATCTGTTCATGACGCTGGTCGCGCTGGGCCGGCTGTTCAGCACCGATCCGAAACCACAAACGGGGTGACAATTTTGTACGGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM600714             [                                                                                                                                                            ccgTGATCGGCGGGTTTACGCTGCTGCTGTCCATACTGATGACACTGGTGATTTTCGAATCGAACGATCCGTACTATCCGATGGAGTTTTATTATAACTACCGCTTCATGGGCACGACGGCACTGGTGCTGGGCATATTCTGGTTCATCGCTGGCGTTACCTTTATGTACGGAGTGCACTATGAGATCAAGCAGTGTCTGCTGCCGTTCGCGCTGCTCTATCTGGTGGATTTGGCGTTGCTAGCCATTCGGGATATCGTGATGATATGGCACGATCGACGCTGGTACACGATGGTGTTTGTGAACATTCCCACGCTGCTGGCCGTGCTGTACATTACTTGCTATCTGTTCATGACGCTTGTCGCACTGGGCCGGCTGTTCAGCACCGATCCGAAACCACAAAC GGGTGACAATTTTGTACGGTTCAGCAACGGCATCGCCAATCCGGTTGCACTCGCCGAGGAGGAGGAGGCGGCACTCGTGGCGG AATAGGTGCGATCCTCTTACCCTACCATAACCTCCTCCCTTCTGTCTAAGCATCCCTGCTGCGTCTCTGCTGTGTGGTCTTGTGTGTGCTATCAGTTTGTGTATGTTTAGACTGTTTCTGTGTGTGTG  TTCCTGTTTGCATTTCCTAAGCTTGCTTGCATGTCTCATCAACAGTGCT                                                                                                                                                                                                                             ]
[+] EMBL BM607096             [                                                                                                                                                                                                                         GAACGATCCGTACTATCCGATGGAGTATTATTATAACTACCGCTTCATGGGCACGACGGCACTGGTGCTGGGCATATTCTGGTTCATCGCTGGCGTTACCTTTATGTACGGAGTGCACTATGAAATCAAGCAGTGTCTGCTGCCGTTTGCGCTGCTCTATCTGGTGGATTTGGCGTTGCTAGCCATCCGGGATATCGTGATGATATGGCACGATCGACGCTGGTACACAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM582011             [                                                                                                                                                                                                                                                                                                                                   ccgGGAGTGCACTATGAGATCAAGCAGTGTCTGCTGCCGTTCGCGCTGCTCTATCTGGTGGATTTGGCGTTGCTAGCCATTCGGGATATCGTGATGATATGGCACGATCGACGCTGGTACACGATGGTGTTTGTGAACATTCCCACGCTGCTGGCCGTGCTGTACATTACTTGCTATCTGTTCATGACGCTTGTCGCACTGGGCCGGCTGTTCAGCACCGATCCGAAACCACAAAC GGGTGACAATTTTGTACGGTTCAGCAACGGCATCGCCAATCCGGTTGCACTCGCCGAGGAGGAGGAGGCGGCACTCGTGGCGG AATAGGTGCGATCCTCTTACCCTACCATAACCTCCTCCCTTCTGTCTAAGCATCCCTGCTGCGTCTCTGCTGTGTGGTCTTGTGTGTGCTATCAGTTTGTGTATGTTTAGACTGTTTCTGTGTGTGTG  TTCCTGTTTGCATTTCCTAAGCTTGCTTGCATGTCTCATCAACAGTGCTTGCCCGAAT                                                                                                                                                                                                                    ]
[+] EMBL CNS09N0N             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGTACATTACTTGCTATCTGTTCATGACGCTGGTCGCGCTGGGCCGGCTGTACAGCACCGATCCGAAACCACAAAC GGGTGACAATTTTGTACGGTTCAGCAACGGCATCGCCAATCCGGTTGCACTCGCC   GAGGAGGAGGCGGCACTCGTGGCGG AATAGGTGCGATCCTCTTACCCTACCATAA   ACTCCCTGCTGTCTAAGCATCCCTGCTGCGTCTCTGCTGTGCGGTCTTGTGTGTGCTATCAGTTTGTGTATGTTTAGACTGTTTCTGTGTGTGTGTATTCCTGTTTGCATTTCCTAAGCTTGCTTGCATGTCTCATCAACAGTGCTTGCCCGAATGAACTAATCGTTCATGCTTTTACGTTATCGCTTCCCAAGGGTTTGCGTGTGTGTGTGTCCTTACAAATGGTGTGGAACTGTTAGCAAACACAGTGCGCTTCCCAACATCGCATAACAATCGCATTACATTCGTTCTGTTAATAATAACCGTGTTAATAAAATGATAAGTGCTTTAAAAGGGAAAAAAAAAAAAAAAAAAAAAAGGCCACATG]




>consensus_8813#0
CCGCCCACGCGTCCGGTGCACAGTGTTAGACGCGCTTCTGATTAGCTCCTCGCCGCCATA
GAACAGCCCAGTTTTGCGTGTTAATTTGCGTGACATTTTCACAAAGACACAGCAATATGG
AGCGCTACCTACGGTTTTACATAAAATTCCAAGGATACATGATCGGCGGGTTTACGCTGC
TGCTGTCCATACTGATGACACTGGTGATTTTCGAATCGAACGATCCGTACTATCCGATGG
AGTTTTATTATAACTACCGCTTCATGGGCACGACGGCACTGGTGCTGGGCATATTCTGGT
TCATCGCTGGCGTTACCTTTATGTACGGAGTGCACTATGAGATCAAGCAGTGTCTGCTGC
CGTTCGCGCTGCTCTATCTGGTGGATTTGGCGTTGCTAGCCATTCGGGATATCGTGATGA
TATGGCACGATCGACGCTGGTACACGATGGTGTTTGTGAACATTCCCACGCTGCTGGCCG
TGCTGTACATTACTTGCTATCTGTTCATGACGCTTGTCGCACTGGGCCGGCTGTTCAGCA
CCGATCCGAAACCACAAACGGGTGACAATTTTGTACGGTTCAGCAACGGCATCGCCAATC
CGGTTGCACTCGCCGAGGAGGAGGAGGCGGCACTCGTGGCGGAATAGGTGCGATCCTCTT
ACCCTACCATAACCTCCTCCCTTCTGTCTAAGCATCCCTGCTGCGTCTCTGCTGTGTGGT
CTTGTGTGTGCTATCAGTTTGTGTATGTTTAGACTGTTTCTGTGTGTGTGTTCCTGTTTG
CATTTCCTAAGCTTGCTTGCATGTCTCATCAACAGTGCTTGCCCGAATGAACTAATCGTT
CATGCTTTTACGTTATCGCTTCCCAAGGGTTTGCGTGTGTGTGTGTCCTTACAAATGGTG
TGGAACTGTTAGCAAACACAGTGCGCTTCCCAACATCGCATAACAATCGCATTACATTCG
TTCTGTTAATAATAACCGTGTTAATAAAATGATAAGTGCTTTAAAAGGGAAAAAAAAAAA
AAAAAAAAAAAGGCCACATG

consensusID : consensus_8813#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 522
fasta sequence

                              [CTGGGCATATTCTGGTTCATCGCTGGCGTTACCTTTTATGTACGGAGTGCACTATGAGATCAAGCAGTGTCTGCTGCCGTTCGCGCTGCTCTATCTGGTGGATTTGGCGTTGCTAGCCATTCGGGATATCGTGATGATATGGCACGATCGACGCTGGTACACGATGGTGTTTGTGAACATTCCCACGCTGCTGGCCGTGCTGTGTAAGTGTTGTCTCCCCAGGAAAAAAACAGCATCCCCTTTCAAACGGCATCATTAACGCAAAACGTTAACTTTCCAGACATTACTTGCTATCTGTTCATGACGCTTGTCGCACTGGGCCGGCTGTTCAGCACCGATCCGAAACCACAAACGGGTGACAATTTTGTACGGTTCAGCAACGGCATCGCCAATCCGGTTGCACTCGCCGAGGAGGAGGAGGCGGCACTCGTGGCGGAATAGGTGCGATCCTCTTACCCTACCATAACCTCCTCCCTTCTGTCTAAGCATCCCTGCTGCGTCTCTGCTGTGTGGTCTTGTGTG]

[-] EMBL BX602255             [CTGGGCATATTCTGGTTCATCGCTGGCGTTACCTTTTATGTACGGAGTGCACTATGAGATCAAGCAGTGTCTGCTGCCGTTCGCGCTGCTCTATCTGGTGGATTTGGCGTTGCTAGCCATTCGGGATATCGTGATGATATGGCACGATCGACGCTGGTACACGATGGTGTTTGTGAACATTCCCACGCTGCTGGCCGTGCTGTGTAAGTGTTGTCTCCCCAGGAAAAAAACAGCATCCCCTTTCAAACGGCATCATTAACGCAAAACGTTAACTTTCCAGACATTACTTGCTATCTGTTCATGACGCTTGTCGCACTGGGCCGGCTGTTCAGCACCGATCCGAAACCACAAACGGGTGACAATTTTGTACGGTTCAGCAACGGCATCGCCAATCCGGTTGCACTCGCCGAGGAGGAGGAGGCGGCACTCGTGGCGGAATAGGTGCGATCCTCTTACCCTACCATAACCTCCTCCCTTCTGTCTAAGCATCCCTGCTGCGTCTCTGCTGTGTGGTCTTGTGTG]




>consensus_8813#1
CTGGGCATATTCTGGTTCATCGCTGGCGTTACCTTTTATGTACGGAGTGCACTATGAGAT
CAAGCAGTGTCTGCTGCCGTTCGCGCTGCTCTATCTGGTGGATTTGGCGTTGCTAGCCAT
TCGGGATATCGTGATGATATGGCACGATCGACGCTGGTACACGATGGTGTTTGTGAACAT
TCCCACGCTGCTGGCCGTGCTGTGTAAGTGTTGTCTCCCCAGGAAAAAAACAGCATCCCC
TTTCAAACGGCATCATTAACGCAAAACGTTAACTTTCCAGACATTACTTGCTATCTGTTC
ATGACGCTTGTCGCACTGGGCCGGCTGTTCAGCACCGATCCGAAACCACAAACGGGTGAC
AATTTTGTACGGTTCAGCAACGGCATCGCCAATCCGGTTGCACTCGCCGAGGAGGAGGAG
GCGGCACTCGTGGCGGAATAGGTGCGATCCTCTTACCCTACCATAACCTCCTCCCTTCTG
TCTAAGCATCCCTGCTGCGTCTCTGCTGTGTGGTCTTGTGTG

consensusID : consensus_8813#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 452
fasta sequence

                              [TCCCCGAGGTACAGCCAGTTTGCGTGTTATTTGCGTGACATTTTCACAAAGACACAGCAATATGGAGCGCTACCTACGGTTTTACATAAAATTCCCAGGATACATGATCGGCGGGTTTACGCTGCTGCTGTCCATACTGATGACACTGGTGATTTTCGAATCGAACGATCCGTACTATCCGATGGAGTTTTATTATAACTACCGCTTCATGGGCACGACGGCACTGGTGCTGGGCATATTCTGGTTCATCCGCTGGCGTTACCTTTAATGTACGGAGTGCACTATGAGATCAAGCAGTGTCTGCTGCCGTTCGCGCTGCTCTATCTGGTGGATTTGGCGTTGCTAACCCATTCGGGATATCCGTGATGATATGGCACGATCCGACGCTGGTACACGATGGTGTTTGTGAACATTCCCACGCTGCGTGGCCGTGCTGTACATTACTTGCGTAT]

[+] EMBL AL931633             [TCCCCGAGGTACAGCCAGTTTGCGTGTTATTTGCGTGACATTTTCACAAAGACACAGCAATATGGAGCGCTACCTACGGTTTTACATAAAATTCCCAGGATACATGATCGGCGGGTTTACGCTGCTGCTGTCCATACTGATGACACTGGTGATTTTCGAATCGAACGATCCGTACTATCCGATGGAGTTTTATTATAACTACCGCTTCATGGGCACGACGGCACTGGTGCTGGGCATATTCTGGTTCATCCGCTGGCGTTACCTTTAATGTACGGAGTGCACTATGAGATCAAGCAGTGTCTGCTGCCGTTCGCGCTGCTCTATCTGGTGGATTTGGCGTTGCTAACCCATTCGGGATATCCGTGATGATATGGCACGATCCGACGCTGGTACACGATGGTGTTTGTGAACATTCCCACGCTGCGTGGCCGTGCTGTACATTACTTGCGTAT]




>consensus_8813#2
TCCCCGAGGTACAGCCAGTTTGCGTGTTATTTGCGTGACATTTTCACAAAGACACAGCAA
TATGGAGCGCTACCTACGGTTTTACATAAAATTCCCAGGATACATGATCGGCGGGTTTAC
GCTGCTGCTGTCCATACTGATGACACTGGTGATTTTCGAATCGAACGATCCGTACTATCC
GATGGAGTTTTATTATAACTACCGCTTCATGGGCACGACGGCACTGGTGCTGGGCATATT
CTGGTTCATCCGCTGGCGTTACCTTTAATGTACGGAGTGCACTATGAGATCAAGCAGTGT
CTGCTGCCGTTCGCGCTGCTCTATCTGGTGGATTTGGCGTTGCTAACCCATTCGGGATAT
CCGTGATGATATGGCACGATCCGACGCTGGTACACGATGGTGTTTGTGAACATTCCCACG
CTGCGTGGCCGTGCTGTACATTACTTGCGTAT

consensusID : consensus_8813#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 314
fasta sequence

                              [GCAGAATCCCGCACGAGTGTAAGACGCGCTTCTGATTAGCTCCTCGGCCGGCATAGAACAGCCCAGTTTTGCGTGTTAATTTGCGTGACATTTTCACAAAGACACAGCAATATGGAGCGCTACCTACGGTTTTACATAAAGATTCCAAGGATACATGATCGGCGGGTTTACGCTGCTGCTGTCCATACTGATGACACTGGTGATTTTCGAATCGAACGATCCGTACTATCCGATGGAGTTTGATNTATAAGCTACCGCTTCATGGGCACGACGGCACGTGGTGCGTGGGCNTAGTTCTGGTTCATCGGCTGGNG]

[+] EMBL BX469203             [GCAGAATCCCGCACGAGTGTAAGACGCGCTTCTGATTAGCTCCTCGGCCGGCATAGAACAGCCCAGTTTTGCGTGTTAATTTGCGTGACATTTTCACAAAGACACAGCAATATGGAGCGCTACCTACGGTTTTACATAAAGATTCCAAGGATACATGATCGGCGGGTTTACGCTGCTGCTGTCCATACTGATGACACTGGTGATTTTCGAATCGAACGATCCGTACTATCCGATGGAGTTTGATNTATAAGCTACCGCTTCATGGGCACGACGGCACGTGGTGCGTGGGCNTAGTTCTGGTTCATCGGCTGGNG]




>consensus_8813#3
GCAGAATCCCGCACGAGTGTAAGACGCGCTTCTGATTAGCTCCTCGGCCGGCATAGAACA
GCCCAGTTTTGCGTGTTAATTTGCGTGACATTTTCACAAAGACACAGCAATATGGAGCGC
TACCTACGGTTTTACATAAAGATTCCAAGGATACATGATCGGCGGGTTTACGCTGCTGCT
GTCCATACTGATGACACTGGTGATTTTCGAATCGAACGATCCGTACTATCCGATGGAGTT
TGATNTATAAGCTACCGCTTCATGGGCACGACGGCACGTGGTGCGTGGGCNTAGTTCTGG
TTCATCGGCTGGNG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8813#2      ------------------------------------------------------------
consensus_8813#3      ---------------------------GCAGAATCCCGCACG-AGTGTAAGACGCGCTTC 32
consensus_8813#0      ----------------------CCGCCCACGCGTCCGGTGCACAGTGTTAGACGCGCTTC 38
consensus_8813#1      CTGGGCATATTCTGGTTCATCGCTGGCGTTACCTTTTATGTACGGAGTGCACTATGAGAT 60
                                                                                  

consensus_8813#2      ---------------TCCCCGAGGTACAGCCAG--TTTGCGTGTT--A-TTTGCGTGACA 40
consensus_8813#3      TGATTAGCTCCTCGGCCGGCATAGAACAGCCCAGTTTTGCGTGTT--AATTTGCGTGACA 90
consensus_8813#0      TGATTAGCTCCTCG-CCGCCATAGAACAGCCCAGTTTTGCGTGTT--AATTTGCGTGACA 95
consensus_8813#1      CAAGCAGTGTCTGCTGCCGT-TCGCGCTGCTCTATCTGGTGGATTTGGCGTTGCTAGCCA 119
                                      *      *  * **      * * *  **     ****  * **

consensus_8813#2      TTT------TCACAAAGACACAGCAATATGGAGCGCTACCTACGGT--TTTACATAAA-A 91
consensus_8813#3      TTT------TCACAAAGACACAGCAATATGGAGCGCTACCTACGGT--TTTACATAAAGA 142
consensus_8813#0      TTT------TCACAAAGACACAGCAATATGGAGCGCTACCTACGGT--TTTACATAAA-A 146
consensus_8813#1      TTCGGGATATCGTGATGATATGGCACGATCGACGCTGGTACACGATGGTGTTTGTGAACA 179
                      **       **   * ** *  ***  ** **         *** *  * *   * ** *

consensus_8813#2      TTCCCAGGATACATGATCGGCGGGTTTACGCTGCTGCTGTCCATACTGATGACACTGGTG 151
consensus_8813#3      TTCCAAGGATACATGATCGGCGGGTTTACGCTGCTGCTGTCCATACTGATGACACTGGTG 202
consensus_8813#0      TTCCAAGGATACATGATCGGCGGGTTTACGCTGCTGCTGTCCATACTGATGACACTGGTG 206
consensus_8813#1      TTCCCACGCTGC-TGGCCGTGCTGTGTAAGTGTTGTCTCCCCAGGAAAAAAACAGCATCC 238
                      **** * * * * **  **    ** ** *      **  ***     *  ***      

consensus_8813#2      ATTTTCGAATCGAACGATCCGTACTATCCGATGGAGTTTTATT-ATAA-CTACCGCTTCA 209
consensus_8813#3      ATTTTCGAATCGAACGATCCGTACTATCCGATGGAGTTTGATNTATAAGCTACCGCTTCA 262
consensus_8813#0      ATTTTCGAATCGAACGATCCGTACTATCCGATGGAGTTTTATT-ATAA-CTACCGCTTCA 264
consensus_8813#1      CCTTTCAAACGGCATCATTAACGCAAAACGTTAACTTTCCAGACATTA---CTTGCTATC 295
                        **** **  * *  **     * *  ** *    **  *   ** *      ***   

consensus_8813#2      TGGGCACGACGGCAC-TGGTGC-TGGGCATA-TTCTGGTTCATCCGCTGGCGTTACCTTT 266
consensus_8813#3      TGGGCACGACGGCACGTGGTGCGTGGGCNTAGTTCTGGTTCATCGGCTGGNG-------- 314
consensus_8813#0      TGGGCACGACGGCAC-TGGTGC-TGGGCATA-TTCTGGTTCATC-GCTGGCGTTACCTTT 320
consensus_8813#1      TGTTCATGACG-CTTGTCGCAC-TGGGCCGGCTGTTCAGCACCGATCCGAAACCACAAAC 353
                      **  ** **** *   * *  * *****    *  *          * *           

consensus_8813#2      AATGTACGGAGTGCACTATGAGATCAAGCAGTGTCTGCTGCCGTTCGCGCTGCTCTATCT 326
consensus_8813#3      ------------------------------------------------------------
consensus_8813#0      A-TGTACGGAGTGCACTATGAGATCAAGCAGTGTCTGCTGCCGTTCGCGCTGCTCTATCT 379
consensus_8813#1      GGGTGACAATTTTGTACGGTTCAGCAACGGCATCGCCAATCCGGTTGCACTCGCCGAGGA 413
                                                                                  

consensus_8813#2      GGTGGATTTGGCGTTGCTAACCCATTCGGGATATCCGTGATGATATGGCACGATCCGACG 386
consensus_8813#3      ------------------------------------------------------------
consensus_8813#0      GGTGGATTTGGCGTTGCTAGCC-ATTCGGGATATC-GTGATGATATGGCACGATC-GACG 436
consensus_8813#1      GGAGGAGGCGGCACTCGTGGCGGAATAGGTGCGATCCTCTTACCCTACCATAACCTCCTC 473
                                                                                  

consensus_8813#2      CTGGTACACGATGGTGTTTGTGAACATTCCCACGCTGCGTGGCCGTGCTGTACATTACTT 446
consensus_8813#3      ------------------------------------------------------------
consensus_8813#0      CTGGTACACGATGGTGTTTGTGAACATTCCCACGCTGC-TGGCCGTGCTGTACATTACTT 495
consensus_8813#1      CCTTCTGTCTAAGCATCCCTGCTGCGTCTCTGCTGTGTGGTCTTGTGTG----------- 522
                                                                                  

consensus_8813#2      GCGTAT------------------------------------------------------ 452
consensus_8813#3      ------------------------------------------------------------
consensus_8813#0      GCTATCTGTTCATGACGCTTGTCGCACTGGGCCGGCTGTTCAGCACCGATCCGAAACCAC 555
consensus_8813#1      ------------------------------------------------------------
                                                                                  

consensus_8813#2      ------------------------------------------------------------
consensus_8813#3      ------------------------------------------------------------
consensus_8813#0      AAACGGGTGACAATTTTGTACGGTTCAGCAACGGCATCGCCAATCCGGTTGCACTCGCCG 615
consensus_8813#1      ------------------------------------------------------------
                                                                                  

consensus_8813#2      ------------------------------------------------------------
consensus_8813#3      ------------------------------------------------------------
consensus_8813#0      AGGAGGAGGAGGCGGCACTCGTGGCGGAATAGGTGCGATCCTCTTACCCTACCATAACCT 675
consensus_8813#1      ------------------------------------------------------------
                                                                                  

consensus_8813#2      ------------------------------------------------------------
consensus_8813#3      ------------------------------------------------------------
consensus_8813#0      CCTCCCTTCTGTCTAAGCATCCCTGCTGCGTCTCTGCTGTGTGGTCTTGTGTGTGCTATC 735
consensus_8813#1      ------------------------------------------------------------
                                                                                  

consensus_8813#2      ------------------------------------------------------------
consensus_8813#3      ------------------------------------------------------------
consensus_8813#0      AGTTTGTGTATGTTTAGACTGTTTCTGTGTGTGTGTTCCTGTTTGCATTTCCTAAGCTTG 795
consensus_8813#1      ------------------------------------------------------------
                                                                                  

consensus_8813#2      ------------------------------------------------------------
consensus_8813#3      ------------------------------------------------------------
consensus_8813#0      CTTGCATGTCTCATCAACAGTGCTTGCCCGAATGAACTAATCGTTCATGCTTTTACGTTA 855
consensus_8813#1      ------------------------------------------------------------
                                                                                  

consensus_8813#2      ------------------------------------------------------------
consensus_8813#3      ------------------------------------------------------------
consensus_8813#0      TCGCTTCCCAAGGGTTTGCGTGTGTGTGTGTCCTTACAAATGGTGTGGAACTGTTAGCAA 915
consensus_8813#1      ------------------------------------------------------------
                                                                                  

consensus_8813#2      ------------------------------------------------------------
consensus_8813#3      ------------------------------------------------------------
consensus_8813#0      ACACAGTGCGCTTCCCAACATCGCATAACAATCGCATTACATTCGTTCTGTTAATAATAA 975
consensus_8813#1      ------------------------------------------------------------
                                                                                  

consensus_8813#2      ------------------------------------------------------------
consensus_8813#3      ------------------------------------------------------------
consensus_8813#0      CCGTGTTAATAAAATGATAAGTGCTTTAAAAGGGAAAAAAAAAAAAAAAAAAAAAAGGCC 1035
consensus_8813#1      ------------------------------------------------------------
                                                                                  

consensus_8813#2      -----
consensus_8813#3      -----
consensus_8813#0      ACATG 1040
consensus_8813#1      -----