Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8814 cluster # 8814       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8814#0 length = 1974 sequences # 10  
consensus_8814#1 length = 356 sequences # 2  

consensusID : consensus_8814#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1974
fasta sequence
                              [CCGCCCACGCGTCCGCAGCTGGTCGATTGCATATTCCCCGTCGTGCTGGCACCGGTTCCGCCGCCCAAGAGCGTGGCGGCGACGACCGAGTTCAAGCCGTTCGTCGAGATGAGCATGGTGCAGCGCATCATTCCGCACTCGAACATTAAGCAGTTCAAGTATCTGCGCGTGCTAATACAGGAGTTCCACGTGAAGGTGGATCTGCTGTTCATAAATGAAATCTGCGAAATGATCAGCAGCGAAATCACCGAAACGGAAGCGAAACGACTGTTTGCCGAGGATCTGAAGCTTCAAACGCAACCGCTGCACGCGCACGTTGCCATTCAGTCGCAGCAGGAGGTGAAGAACTTTTACGACAACCTTCACCTGGGGCCGCTCAAAATTCACGTCAGCTTCTCGATGGCTGGCTCCGAATCGAAGGCACTGCCCGGCATCCTGTCGACGATTCTACAGGGCGTTGGCGTAACGTTAACCGACATCAACGATGTCGTGTTCCGGCTGGCGTTCTTCGAGCGCGAATATCAGTTCCTCACCCAGCGGCAGCTCGTCTCGGAGTGCGTGACACACTACAGCGGGCAGGCGGTTAAGCAGCTGTACGTGCTGGTGCTGGGACTGGACGTGATCGGCAATCCGTACGGGCTGGTGGTTGGTTTTACCAAGGGCGTCGAAGATCTGTTCTACGAACCGTTCCAGGGAGCGATACAAGGGCCGGGCGAGTTCGCCGAGGGCCTCGTGCTCGGCGTAAAGTCTCTGTTCGGGCATACGGTTGGCGGAGCGGCCGGTGCCGTTTCAAAAATAACTGGTGCCATGGGCAAGGGTTTGGCGGCGTTGACGTTCGACGACGATTTCCAGAAGAAGCGCCGTGATGCGATGAACAAAAAACCGGCCAGCCTGCAGGAAGGCATCGCTCGCAGCGGCAAGGGCCTGGTGATGGGCGTGTTCGACGGTGTTACGGGAGTGTTTACCAAACCGATCAGTGGCGCTAAGGAGGAGGGCGTCGAGGGATTCTTCAAGGGTCTGGGCAAAGGTGCGGTGGGGCTAGTTGCTCGACCGATAGCGGGAGTGACCGATTTCGCTAGTGGCAGTTTCGACGCAGTCAAGCGTGCAACGGAACTGTCCGATGAAGCGATACGCTTGCGTCCTCCCCGCTACCTACACAAGGACGGCATTGTTCGGCCGTACAATCGGAAGGAAGCGGAAGGCTGTAAGCTGTTAAGGGAAATTGATAAAGGGAAATTTGCTGCTACGGACGCATACGCTTATTACGAGGTGATCATTGACAATAAGGATGTCGTCGTGCTGACGGATAGTCGTATTATCTATGCAACCAAGAGTGAAATGTTTGGTGGATGGCAGTCCGAGTGGACACACAAATGGACGGAAATCCTGAGCATCTCCACACTGAACGACGGAGTCGAGCTTCTGCTCCACAATCGGGACGGCAAGAAGACACTGAAGAAAATGTTCGGCTCATCTGGACCAACCAAAAAGATTCTCCTCATATCGGTCGCAGCGAGACGGGCACGACTCGCCGAGGAAATGCAGCAACTGTTGGCCAAGGTTCAGCAGCAGCATGCCTAA-TCGGATGGCAAAAACTGTAAAAAGTGTGTTCCGCTTCGGGCCGTGATGGAGCATGATGATGATTATTACCGAACAGCAGAAGCACCTGAAGGAATGAAGCGCGGTTACTTGCTGCAACGTAACTTAATTCCGTTTATAGCCTATTTGTTACTGAAATAATGCAATAATGTTGTTTTTTTTTTGTACGATTTCTCTCATTTTTCGTGTCGAAGCGACGAACCGCATGTATATTTTGTTACACAGCGACCGTTTAGTAAACGTAGTATTTTAACACAGCTGTGTAATGTGCAACAAAAAACGGAATCAATCTAAAGTACAAACATATTTACTTCTTCTGGAACTGCGCTTAAAAAAACGCCTATTGATATGTTGTTGTGGCCGGGNCCTGTGCCA]

[+] EMBL BM614107             [CCGCCCACGCGTCCGCAGCTGGTCGATTGCATATTCCCCGTCGTGCTGGCACCGGTTCCGCCGCCCAAGAGCGTGGCGGCGACGACCGAGTTCAAGCCGTTCGTCGAGATGAGCATGGTGCAGCGCATCATTCCGCACTCGAACATTAAGCAGTTCAAGTATCTGCGCGTGCTAATACAGGAGTTCCACGTGAAGGTGGATCTGCTGTTCATAAATGAAATCTGCGAAATGATCAGCAGCGAAATCACCGAAACGGAAGCGAAACGACTGTTTGCCGAGGATCTGAAGCTTCAAACGCAACCGCTGCACGCGCACGTTGCCATTCAGTCGCAGCAGGAGGTGAAGAACTTTTACGACAACCTTCACCTGGGGCCGCTCAAAATTCACGTCAGCTTCTCGATGGCTGGCTCCGAATCGAAGGCACTGCCCGGCATCCTGTCGACGATTCTACAGGGCGTTGGCGTAACGTTAACCGACATCAACGATGTCGTGTTCCGGCTGGCGTTCTTCGAGCGCGAATATCAGTTCCTCACCCAGCGGCAGCTCGTCTCGGAGTGCGTGACACACTACAGCGGGCAGGCGGTTAAGCAGCTGTACGTGCTGGTGCTGGGACTGGACGTGATCGGCAATCCGTACGGGCTGGTGGTTGGTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM584700             [                                                                        ccGGCGGCGACGACCGAGTTCAAGCCGTTCGTCGAGATGAGCATGGTGCAGCGCATCATTCCACACTCGAACATTAAACAGTTCAAGTATCTGCGCGTGCTAATACAGGAGTTCCACGTGAAGGTGGATCTGCTGTTCATAAATGAAATCTGCGAAATGATCAGCAGCGAAATCACCGAAACGGAAGCGAAACGACTGTTTGCCGAGGATCTGAAGCTTCAAACGCAACCGCTGCACGCGCACGTTGCCATTCAGTCGCAGCAGGAGGTGAAGAACTTTTACGACAACCTTCACCTGGGGCCGCTCAAAATTCACGTCAGCTTCTCGATGGCTGGCTCCGAATCGAAGGCACTGCCCGGCATCCTGTCGACGATTCTACAGGGCGTTGGCGTAACGTTAACCGACATCAACGATGTCGTGTTCCGGCTGGCGTTCTTCGAGCGCGAATATCAGTTCCTCACCCAGCGGCAGCTCGTCTCGGAGTGCGTGACACACTACAGCGGGCAGGCGGTTAAGCAGCTGTACGTGCTGGTCCTGGGACTGGACGTGATCGGCAATCCGTACGGGCTGGTGGTTGGTTTTACCAAGGGCGTCGAAGATCTGTTCTACGAACCGTTCCAGGGAGCGATACAAGGGCCGGGCGAGTTCGCCGAGGGCCTCGTGCTTGGCGTAAAGTCTCTGTTCGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM656227             [                                                                                                                             ccgCATTCCGCACTCGAACATTAAGCAGTTCAAGTATCTGCGCGTGCTAATACAGGAGTTCCACGTGAAGGTGGATCTGCTGTTCATAAATGAAATCTGCGAAATGATCAGCAGCGAAATCACCGAAACGGAAGCGAAACGACTGTTTGCCGAGGATCTGAAGCTTCAAACGCAACCGCTGCACGCGCACGTTGCCATTCAGTCGCAGCAGGAGGTGAAGAACTTTTACGACAACCTTCACCTGGGGCCGCTCAAAATTCACGTCAGCTTCTCGATGGCTGGCTCCGAATCGAAGGCACTGCCCGGCATCCTGTCGACGATTCTACAGGGCGTTGGCGTAACGTTAACCGACATCAACGATGTCGTGTTCCGGCTGGCGTTCTTCGAGCGCGAATATCAGTTCCTCACCCAGCGGCAGCTCGTCTCGGAGTGCGTGACACACTACAGCGGGCAGGCGGTTAAGCAGCTGTACGTGCTGGTCCTGGGACTGGACGTGATCGGCAATCCGTACGGGCTGGTGGTTGGTTTTACCAAGGGCGTCGAAGATCTGTTCTACGAACCGTTCCAGGGAGCGATACAAGGGCCGGGCGAGTTCGCCGAGGGCCTCGTGCTCGGCGTAAAGTCTCTGTTCGGGCATACGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX616717             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CCGACATCAACGATGTCGTGTTCCGGCTGGCGTTCTTCGAGCGCGAATATCAGTTCCTCACCCAGCGGCAGCTCGTCTCGGAGTGCGTGACACACTACAGCGGGCAGGCGGTTAAGCAGCTGTACGTGCTGGTGCTGGGACTGGACGTGATCGGCAATCCGTACGGGCTGGTGGTTGGTTTTACCAAGGGCGTCGAAGATCTGTTCTACGAACCGTTCCAGGGAGCGATACAAGGGCCGGGCGAGTTCGCCGAGGGCCTCGTGCTCGGCGTAAAGTCTCTGTTCGGGCATACGGTTGGCGGAGCGGCCGGTGCCGTTTCAAAAATAACTGGTGCCATGGGCAAGGGTTTGGCGGCGTTGACGTTCGACGACGATTTCCAGAAGAAGCGCCGTGATGCGATGAACAAAAAACCGGCCAGCCTGCAGGAAGGCATCGCTCGCAGCGGCAAGGGCCTGGTGATGGGCGTGTTCGACGGTGTTACGGGAGTGTTTACCAAACCGATCAGTGGCGCTAAGGAGGAGGGCGTCGAGGGATTCTTCAAGGGTCTGGGCAAAGGTGCGGTGGGGCTAGTTGCTCGACCGATAGCGGGAGTGACCGATTTCGCTAGTGGCAGTTTCGACGCAGTCAAGCGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX603483             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCGTTGACGTTCGATGACGATTTCCAGAAGAAGCGCCGTGATGCGATGAACAAAAAACCGGCCAGCCTGCAGGAAGGCATCGCTCGCAGCGGCAAGGGCCTGGTGATGGGCGTGTTCGACGGTGTTACGGGAGTGTTTACCAAACCGATCATTGGCGCTAAGGAGGAGGGCGTCGAGGGATTCTTCAAGGGTCTGGGCAAAGGTGCGGTGGGGCTAGTTGCTCGACCGATAGCGGGAGTGACCGATTTCGCTAGTGGCAGTTTTGACGCAGTCAAGCGTGCAACGGAACTGTCCGATGAAGCGATACGCTTGCGTCCTCCCCGCTACCTACACAAGGACGGCATTGTTCGGCCGTACAATCGGAAGGAAGCGGAAGGCTGTAAGCTGTTAAGGGAAATTGATAAAGGGAAATTTGCTGCTACGGACGCATACGCTTATTACGAGGTGATCATTGACAATAAGGATGTCGTCGTGCTGACGGATAGTCGTATTATCTATGCAACCAAGAGTGAAATGTTTGGTGGATGGCAGTCCGAGTGGACACACAAATGGACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX622683             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGATCAGTGGCGCTAAGGAGGAGGGCGTCGAGGGATTCTTCAAGGGTCTGGGCAAAGGTGCGGTGGGGCTAGTTGCTCGACCGATAGCGGGAGTGACCGATTTCGCTAGTGGCAGTTTCGACGCAGTCAAGCGTGCAACGGAACTGTCCGATGAAGCGATACGCTTGCGTCCTCCCCGCTACCTACACAAGGACGGCATTGTTCGGCCGTACAATCGGAAGGAAGCGGAAGGCTGTAAGCTGTTAAGGGAAATTGATAAAGGGAAATTTGCTGCTACGGACGCATACGCTTATTACGAGGTGATCATTGACAATAAGGATGTCGTCGTGCTGACGGATAGTCGTATTATCTATGCAACCAAGAGTGAAATGTTTGGTGGATGGCAGTCCGAGTGGACACACAAATGGACGGAAATCCTGAGCATCTCCACACTGAACGACGGAGTCGAGCTTCTGCTCCATAATCGGGACGGCAAGAAGACACTGAAGAAAATGTTCGGCTCATCTGGACCAACCAAAAAGATTCTCCTCATATCGGTCGCAGCGAGACGGGCACGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM616088             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccgccCACGCGTCCGCCCACGCGTCCG  GGGGTTAGTTGCTCGACCGATAGCGGGAGTGACCGATTTCGCTAGTGGCAGTTTCGACGCGGTCAAGCGTGCAACGGAACTGTCCGATGAAGCGATACGCTTGCGTCCTCCCCGCTACCTACACAAGGACGGTATTGTTCGGCCGTACAATCGGAAGGAAGCGGAAGGCTGTAAGCTGTTAAGGGAAATTGATAAAGGGAAATTTGCTGCTACGGACGCATACGCTTATTACGAGGTGATCATTGACAATAAGGATGTCGTCGTGCTGACAGATAGTCGTATTATCTATGCAACCAAGAGTGAAATGTTTGGTGGATGGCAGTCCGAGTGGACACACAAATGGACGGAAATCCTGAGCATCTCCACACTGAACGACGGAGTCGAGCTTCTGCTCCATAATCGGGACGGCAAGAAGACACTGAAGAAAATGTTCGGCTCATCTGGACCAACCAAAAAGATTCTCCTCATATCGGTCGCTGCGAGACGGGCCCGACTCGCCGAGGAAATGCAGCAACTGTTGGCCAAGGTTCAGCAGCAGCATGCCTAATTGGGATGGC         AAAAAGTGTGTTCCGCTTCGGGTCGTGATGGAGCATGATGATGATTATTACCGAACAGCAGAAGCACCTGAAGGAATGGAGCGCGGTTACTTGCTGCAACGTAACTTAA                                                                                                                                                                                                                                                                          ]
[+] EMBL BX616016             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGTCCGATGAAGCGATACGCTTGCGTCCTCCCCGCTACCTACACAAGGACGGCATTGTTCGGCCGTACAATCGGAAGGAAGCGGAAGGCTGTAAGCTGTTAAGGGAAATTGATAAAGGGAAATTTGCTGCTACGGACGCATACGCTTATTACGAGGTGATCATTGACAATAAGGATGTCGTCGTGCTGACGGATAGTCGTATTATCTATGCAACCAAGAGTGAAATGTTTGGTGGATGGCAGTCCGAGTGGACACACAAATGGACGGAAATCCTGAGCATCTCCACACTGAACGACGGAGTCGAGCTTCTGCTCCACAATCGGTACGGCAAGAAGACACTGAAGAAAATGTTCGGCTCATCTGGACCAACCAAAAAGATTCTCCTCATATCGGTCGCAGCGAGACGGGCACGACTCGCCGAGGAAATGCAGCAACTGTTGGCCAAGGTTCAGCAGCAGCATGCCTAA TCGGATGGCAAAAACTGTAAAAAGTGTGTTCCGCTTCGGGCCGTGATGGAGCATGATGATGATTATTACCGAACAGCAGAAGCACCTGAAGGAATGAAGCGCGGTTACTTGCTGCAACGTAACTTAATTCCGTTTATAGCCTATTTGTTACTGAAATAATGCAATAATGTTGTTTTTTTTTTGTACGATTTCTCTCATTTTTCGTGTCGAAGCGACGAACCGCATGTATATTTTGTTACACAGCGACCGTTTAGTAAACGTAG                                                                                                                                  ]
[+] EMBL BX614772             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCGTATTATCTATGCAACCAAGAGTGAAATGTTTGGTGGATGGCAGTCCGAGGGGACACACAAATGGACGGAAATCCTGAGCATCTCCACACTGAACGACGGAGTCGAGCTTCTGCTCCACAATCGGGACGGCAAGAAGACACTGAAGAAAATGTTCGGCTCATCTGGACCAACCAAAAAGAATCTCCTCATATCGGTCGCAGCGAGACGGGCACGACTCGCCGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX627131             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TATTATCTATGCAACCAAGAGTGAAATGTTTGGTGGATGGCAGTCCGAGTGGACACACAAATGGACGGAAATCCTGAGCATCTCCACACTGAACGACGGAGTCCAGCTTCTGCTCCACAATCGGGACGGCAAGAAGACACTGAAGAAAATGTTCGGCTCATCTGGACCAACCAAAAAGATTCTCCTCATATCGGTCGCAGCGAGACGGGCACGACTCGCCGAGGAAATGCAGCAACTGTTGGCCAAGGTTCAGCAGCAGCATGCCTAA TCGGATGGCAAAAACTGTAAAAAGTGTGTTCCGCTTCGGGCCGTGATGGAGCATGATGATGATTATTACCGAACAGCAGAAGCACCTGAAGGAATGAAGCGCGGTTACTTGCTGCAACGTAACTTAATTCCGTTTATAGCCTATTTGTTACTGAAATAATGCAATAATGTTGTTTTTTTTTTGTACGATTTCTCTCATTTTTCGTGTCGAAGCGACGAACCGCATGTATATTTTGTTACACAGCGACCGTTTAGTAAACGTAGTATTTTAACACAGCTGTGTAATGTGCAACAAAAAACGGAATCAATCTAAAGTACAAACATATTTACTTCTTCTGGAACTGCGCTTAAAAAAACGCCTATTGATATGTTGTTGTGGCCGGGNCCTGTGCCA]


>consensus_8814#0 CCGCCCACGCGTCCGCAGCTGGTCGATTGCATATTCCCCGTCGTGCTGGCACCGGTTCCG CCGCCCAAGAGCGTGGCGGCGACGACCGAGTTCAAGCCGTTCGTCGAGATGAGCATGGTG CAGCGCATCATTCCGCACTCGAACATTAAGCAGTTCAAGTATCTGCGCGTGCTAATACAG GAGTTCCACGTGAAGGTGGATCTGCTGTTCATAAATGAAATCTGCGAAATGATCAGCAGC GAAATCACCGAAACGGAAGCGAAACGACTGTTTGCCGAGGATCTGAAGCTTCAAACGCAA CCGCTGCACGCGCACGTTGCCATTCAGTCGCAGCAGGAGGTGAAGAACTTTTACGACAAC CTTCACCTGGGGCCGCTCAAAATTCACGTCAGCTTCTCGATGGCTGGCTCCGAATCGAAG GCACTGCCCGGCATCCTGTCGACGATTCTACAGGGCGTTGGCGTAACGTTAACCGACATC AACGATGTCGTGTTCCGGCTGGCGTTCTTCGAGCGCGAATATCAGTTCCTCACCCAGCGG CAGCTCGTCTCGGAGTGCGTGACACACTACAGCGGGCAGGCGGTTAAGCAGCTGTACGTG CTGGTGCTGGGACTGGACGTGATCGGCAATCCGTACGGGCTGGTGGTTGGTTTTACCAAG GGCGTCGAAGATCTGTTCTACGAACCGTTCCAGGGAGCGATACAAGGGCCGGGCGAGTTC GCCGAGGGCCTCGTGCTCGGCGTAAAGTCTCTGTTCGGGCATACGGTTGGCGGAGCGGCC GGTGCCGTTTCAAAAATAACTGGTGCCATGGGCAAGGGTTTGGCGGCGTTGACGTTCGAC GACGATTTCCAGAAGAAGCGCCGTGATGCGATGAACAAAAAACCGGCCAGCCTGCAGGAA GGCATCGCTCGCAGCGGCAAGGGCCTGGTGATGGGCGTGTTCGACGGTGTTACGGGAGTG TTTACCAAACCGATCAGTGGCGCTAAGGAGGAGGGCGTCGAGGGATTCTTCAAGGGTCTG GGCAAAGGTGCGGTGGGGCTAGTTGCTCGACCGATAGCGGGAGTGACCGATTTCGCTAGT GGCAGTTTCGACGCAGTCAAGCGTGCAACGGAACTGTCCGATGAAGCGATACGCTTGCGT CCTCCCCGCTACCTACACAAGGACGGCATTGTTCGGCCGTACAATCGGAAGGAAGCGGAA GGCTGTAAGCTGTTAAGGGAAATTGATAAAGGGAAATTTGCTGCTACGGACGCATACGCT TATTACGAGGTGATCATTGACAATAAGGATGTCGTCGTGCTGACGGATAGTCGTATTATC TATGCAACCAAGAGTGAAATGTTTGGTGGATGGCAGTCCGAGTGGACACACAAATGGACG GAAATCCTGAGCATCTCCACACTGAACGACGGAGTCGAGCTTCTGCTCCACAATCGGGAC GGCAAGAAGACACTGAAGAAAATGTTCGGCTCATCTGGACCAACCAAAAAGATTCTCCTC ATATCGGTCGCAGCGAGACGGGCACGACTCGCCGAGGAAATGCAGCAACTGTTGGCCAAG GTTCAGCAGCAGCATGCCTAATCGGATGGCAAAAACTGTAAAAAGTGTGTTCCGCTTCGG GCCGTGATGGAGCATGATGATGATTATTACCGAACAGCAGAAGCACCTGAAGGAATGAAG CGCGGTTACTTGCTGCAACGTAACTTAATTCCGTTTATAGCCTATTTGTTACTGAAATAA TGCAATAATGTTGTTTTTTTTTTGTACGATTTCTCTCATTTTTCGTGTCGAAGCGACGAA CCGCATGTATATTTTGTTACACAGCGACCGTTTAGTAAACGTAGTATTTTAACACAGCTG TGTAATGTGCAACAAAAAACGGAATCAATCTAAAGTACAAACATATTTACTTCTTCTGGA ACTGCGCTTAAAAAAACGCCTATTGATATGTTGTTGTGGCCGGGNCCTGTGCCA



consensusID : consensus_8814#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 356
fasta sequence
                              [TGTGTCCCCAGAAACGACTGTTTGCCGAGGATCTGAAGCTTCAAACGCAACCGCTGCACGCGCACGTTGCCATTCAGTCGCAGCAGGAGGTGAAGAACTTTTACGACAACCTTCACCTGGGGCCGCTCAAAATTCACGTCAGCTTCTCGATGGCTGGCTCCGAATCGAAGGCACTGCCCGGCATCCTGTCGACGATTCTACAGGGCGTTGGCGTAACGTTAACCGACATCAACGATGTCGTGTTCCGGCTGGCGTTCTTCGAGCGCGAATATCAGTTCCTCACCCAGCGGCAGCTCGTCTCGGAGTGCGTGACACACTACAGCGGGCAGGCGGTTAAGCAGCTGTACGTGCTGGTC]

[+] EMBL BM637711             [TGTGTCCCCAGAAACGACTGTTTGCCGAGGATCTGAAGCTTCAAACGCAACCGCTGCACGCGCACGTTGCCATTCAGTCGCAGCAGGAGGTGAAGAACTTTTACGACAACCTTCACCTGGGGCCGCTCAAAATTCACGTCAGCTTCTCGATGGCTGGCTCCGAATCGAAGGCACTGCCCGGCATCCTGTCGACGATTCTACAGGGCGTTGGCGTAACGTTAACCGACATCAACGATGTCGTGTTCCGGCTGGCGTTCTTCGAGCGCGAATATCAGTTCCTCACCCAGCGGCAGCTCGTCTCGGAGTGCGTGACACACTACAGCGGGCAGGCGGTTAAGCAGCTGTACGTGCTGGTC]
[+] EMBL BM634736             [TGTGTCCCCAGAAACGACTGTTTGCCGAGGATCTGAAGCTTCAAACGCAACCGCTGCACGCGCACGTTGCCATTCAGTCGCAGCAGGAGGTGAAGAACTTTTACGACAACCTTCACCTGGGGCCGCTC                                                                                                                                                                                                                                    ]


>consensus_8814#1 TGTGTCCCCAGAAACGACTGTTTGCCGAGGATCTGAAGCTTCAAACGCAACCGCTGCACG CGCACGTTGCCATTCAGTCGCAGCAGGAGGTGAAGAACTTTTACGACAACCTTCACCTGG GGCCGCTCAAAATTCACGTCAGCTTCTCGATGGCTGGCTCCGAATCGAAGGCACTGCCCG GCATCCTGTCGACGATTCTACAGGGCGTTGGCGTAACGTTAACCGACATCAACGATGTCG TGTTCCGGCTGGCGTTCTTCGAGCGCGAATATCAGTTCCTCACCCAGCGGCAGCTCGTCT CGGAGTGCGTGACACACTACAGCGGGCAGGCGGTTAAGCAGCTGTACGTGCTGGTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8814#0      CCGCCCACGCGTCCGCAGCTGGTCGATTGCATATTCCCCGTCGTGCTGGCACCGGTTCCG 60
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      CCGCCCAAGAGCGTGGCGGCGACGACCGAGTTCAAGCCGTTCGTCGAGATGAGCATGGTG 120
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      CAGCGCATCATTCCGCACTCGAACATTAAGCAGTTCAAGTATCTGCGCGTGCTAATACAG 180
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      GAGTTCCACGTGAAGGTGGATCTGCTGTTCATAAATGAAATCTGCGAAATGATCAGCAGC 240
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      GAAATCACCGAAACGGAAGCGAAACGACTGTTTGCCGAGGATCTGAAGCTTCAAACGCAA 300
consensus_8814#1      --------TGTGTCCCCAG--AAACGACTGTTTGCCGAGGATCTGAAGCTTCAAACGCAA 50
                               *   *   **  ***************************************

consensus_8814#0      CCGCTGCACGCGCACGTTGCCATTCAGTCGCAGCAGGAGGTGAAGAACTTTTACGACAAC 360
consensus_8814#1      CCGCTGCACGCGCACGTTGCCATTCAGTCGCAGCAGGAGGTGAAGAACTTTTACGACAAC 110
                      ************************************************************

consensus_8814#0      CTTCACCTGGGGCCGCTCAAAATTCACGTCAGCTTCTCGATGGCTGGCTCCGAATCGAAG 420
consensus_8814#1      CTTCACCTGGGGCCGCTCAAAATTCACGTCAGCTTCTCGATGGCTGGCTCCGAATCGAAG 170
                      ************************************************************

consensus_8814#0      GCACTGCCCGGCATCCTGTCGACGATTCTACAGGGCGTTGGCGTAACGTTAACCGACATC 480
consensus_8814#1      GCACTGCCCGGCATCCTGTCGACGATTCTACAGGGCGTTGGCGTAACGTTAACCGACATC 230
                      ************************************************************

consensus_8814#0      AACGATGTCGTGTTCCGGCTGGCGTTCTTCGAGCGCGAATATCAGTTCCTCACCCAGCGG 540
consensus_8814#1      AACGATGTCGTGTTCCGGCTGGCGTTCTTCGAGCGCGAATATCAGTTCCTCACCCAGCGG 290
                      ************************************************************

consensus_8814#0      CAGCTCGTCTCGGAGTGCGTGACACACTACAGCGGGCAGGCGGTTAAGCAGCTGTACGTG 600
consensus_8814#1      CAGCTCGTCTCGGAGTGCGTGACACACTACAGCGGGCAGGCGGTTAAGCAGCTGTACGTG 350
                      ************************************************************

consensus_8814#0      CTGGTGCTGGGACTGGACGTGATCGGCAATCCGTACGGGCTGGTGGTTGGTTTTACCAAG 660
consensus_8814#1      CTGGTC------------------------------------------------------ 356
                      *****                                                       

consensus_8814#0      GGCGTCGAAGATCTGTTCTACGAACCGTTCCAGGGAGCGATACAAGGGCCGGGCGAGTTC 720
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      GCCGAGGGCCTCGTGCTCGGCGTAAAGTCTCTGTTCGGGCATACGGTTGGCGGAGCGGCC 780
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      GGTGCCGTTTCAAAAATAACTGGTGCCATGGGCAAGGGTTTGGCGGCGTTGACGTTCGAC 840
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      GACGATTTCCAGAAGAAGCGCCGTGATGCGATGAACAAAAAACCGGCCAGCCTGCAGGAA 900
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      GGCATCGCTCGCAGCGGCAAGGGCCTGGTGATGGGCGTGTTCGACGGTGTTACGGGAGTG 960
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      TTTACCAAACCGATCAGTGGCGCTAAGGAGGAGGGCGTCGAGGGATTCTTCAAGGGTCTG 1020
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      GGCAAAGGTGCGGTGGGGCTAGTTGCTCGACCGATAGCGGGAGTGACCGATTTCGCTAGT 1080
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      GGCAGTTTCGACGCAGTCAAGCGTGCAACGGAACTGTCCGATGAAGCGATACGCTTGCGT 1140
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      CCTCCCCGCTACCTACACAAGGACGGCATTGTTCGGCCGTACAATCGGAAGGAAGCGGAA 1200
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      GGCTGTAAGCTGTTAAGGGAAATTGATAAAGGGAAATTTGCTGCTACGGACGCATACGCT 1260
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      TATTACGAGGTGATCATTGACAATAAGGATGTCGTCGTGCTGACGGATAGTCGTATTATC 1320
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      TATGCAACCAAGAGTGAAATGTTTGGTGGATGGCAGTCCGAGTGGACACACAAATGGACG 1380
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      GAAATCCTGAGCATCTCCACACTGAACGACGGAGTCGAGCTTCTGCTCCACAATCGGGAC 1440
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      GGCAAGAAGACACTGAAGAAAATGTTCGGCTCATCTGGACCAACCAAAAAGATTCTCCTC 1500
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      ATATCGGTCGCAGCGAGACGGGCACGACTCGCCGAGGAAATGCAGCAACTGTTGGCCAAG 1560
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      GTTCAGCAGCAGCATGCCTAATCGGATGGCAAAAACTGTAAAAAGTGTGTTCCGCTTCGG 1620
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      GCCGTGATGGAGCATGATGATGATTATTACCGAACAGCAGAAGCACCTGAAGGAATGAAG 1680
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      CGCGGTTACTTGCTGCAACGTAACTTAATTCCGTTTATAGCCTATTTGTTACTGAAATAA 1740
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      TGCAATAATGTTGTTTTTTTTTTGTACGATTTCTCTCATTTTTCGTGTCGAAGCGACGAA 1800
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      CCGCATGTATATTTTGTTACACAGCGACCGTTTAGTAAACGTAGTATTTTAACACAGCTG 1860
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      TGTAATGTGCAACAAAAAACGGAATCAATCTAAAGTACAAACATATTTACTTCTTCTGGA 1920
consensus_8814#1      ------------------------------------------------------------
                                                                                  

consensus_8814#0      ACTGCGCTTAAAAAAACGCCTATTGATATGTTGTTGTGGCCGGGNCCTGTGCCA 1974
consensus_8814#1      ------------------------------------------------------
                                                                            




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)