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Anopheles gambiae
cluster # 8818 cluster # 8818       Sequences # 12       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8818#0 length = 929 sequences # 7  
consensus_8818#1 length = 600 sequences # 2  
consensus_8818#2 length = 597 sequences # 1  
consensus_8818#3 length = 350 sequences # 2  

consensusID : consensus_8818#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 929
fasta sequence
                              [AGGCCAAGAATCGCGCACGAGGGAAACGCCAGTCCCGAAACGTGCGTGTACGTGCTTCTCAATTGTTGAACGATTTATCCCCCGCTGCGCAAGAAAACCTGTATTCCCGCGAGCTATCACACACAAGAATGTCTCGTGAAGCGATCGAAAATCTGACGCTGGACCTGGAGGAGATGCGCAAGCTGGCAGGGAGTGCCCAGCGCAGCCGGGTGCAACAGATGCTGGCCATCGACATTCGCAAGCTGGAGACGGACATACAGCGGCAGCGGGATCTGCTTGCCGCCCAGGCGGCCAGCAGCGAACAGACCGTTGCCCGACCGGTCCAGACCTCCGTCCCCGGTGACGTCCGGCGCTATCAGGTCGAGCTGAAGGAGTACGCGTGGGACCAGAGCGACAAGTTTATCAAAATCTTCGTGACGGTGAACGGCGTGCAGCAGGTGCCGGAAGATAACGTGAACGTGGAGTTTACCGAAAACTCGTTCCAGCTGGTGATTAGCGATCTGAACAACAAGGACTACATCTTCGTCGTGAACAACCTGCTCAACTCGATCGACGCGGAAAAGAGCTACCGGCGCGTCAAGTCCGACATGGTGGCGATCTACCTGGCCAAGCAGGGACCGGCCAAGTGGGCCCA-C--TGACGCTGACGGCCAAGCGGCTGCAGGACCTGAAGGACGAACGGATGTCGGACGGGAAGAAGGCGACGAGCGACGATCCGGTCGGCGGCCTGATTAACCATTATGCAGCAGACTGTACGA-TCGGGCGACCCGGAAACAGAAAGCGGCATTGGATNCGAACCAAGGGCTTAGGCACGAAGTTCGCAGAAGCGANAAAGCAAAAGATGGCTAACCCCTNGGGANGCTTACGGTTGGGTACCGGGTNTTCCATGGGCCTTCGAATAGTAAGGTNTTAAAGGTTGTCCGCACACAGNT]

[+] EMBL BX467434             [AGGCCAAGAATCGCGCACGAGGGAAACGCCAGTCCCGAAACGTGCGTGTACGTGCTTCTCAATTGTTGAACGATTTATCCCCCGCTGCGCAAGAAAACCTGTATTCCCGCGAGCTATCACACACAAGAATGTCTCGTGAAGCGATCGAAAATCTGACGCTGGACCTGGAGGAGATGCGCAAGCTGGCAGGGAGTGCCCAGCGCAGCCGGGTGCAACAGATGCTGGCCATCGACATTCGCAAGCTGGAGACGGACATACAGCGGCAGCGGGATCTGCTTGCCGCCCAGGCGGCCAGCAGCGAACAGACCGTTGCCCGACCGGTCCAGACCTCCGTCCCCGGTGACGTCCGGCGCTATCAGGTCGAGCTGAAGGAGTACGCGTGGGACCAGAGCGACAAGTTTATCAAAATCTTCGTGACGGT AACGGCGTGCAGCAGGTGCCGGAAGATAACGTGAACGTGGAGTTTACCGAAAACTCGTTCCAGCTGGTGATTAGCGATCTGAACAACAAGGACTACATCTTCGTCGTGAACAACCTGCTCAACTCGATCGACGCGGAAAAGAGCTACCGGCGCGTCAAGTCCGACATGGTGGCGATCTACCTTGCCAAGCAGGGACCGGCCAAGTGGGCCCA C  TGACGCTGACGG CAAGCGGCTGCAGGACCTGAAGGACGAACGGATGTCGGACGGGAAGAAGGCGACGAGCGACGATCCGGTCGGCGGCCTGATTAACCATTATGCAGCAGACTGTACGA TCGGGCGACCCGGAAACAGAAAGCGGCATTGGATNCGAACCAAGGGCTTAGGCACGAAGTTCGCAGAAGCGANAAAGCAAAAGATGGCTAACCCCTNGGGANGCTTACGGTTGGGTACCGGGTNTTCCATGGGCCTTCGAATAGTAAGGTNTTAAAGGTTGTCCGCACACAGNT]
[+] EMBL BX620252             [                   gctGAAACGCCAGTCCCGAAACGTGCGTGTACGTGCTTCTCAATTGTTGAACGATTTATCCCCCGCTGCGCAAGAAAACCTGTATTCCCGCGAGCTATCACACACAAGAATGTCTCGTGAAGCGATCGAAAATCTGNCGCTGGACCTGGAGGAGATGCGCAAGCTGGCAGGGAGTGCCCAGCGCAGCCGGGTGCAACAGATGCTGGCCATCGACATTCGCAAGCTGGAGACGGACATACAGCGGCAGCGGGATCTGCTTGCCGCCCAGGCGGCCAGCAGCGAACAGACCGTTGCCCGACCGGTCCAGACCTCCGTCCCCGGTGACGTCCGGCGCTATCAGGTCGAGCTGAAGGAGTACGCGTGGGACCAGAGCGACAAGTTTATCAAAATCTTCGTGACGGTGAACGGCGTGCAGCAGGTGCCGGAAGATAACGTGAACGTGGAGTTTACCGAAAACTCGTTCCAGCTGGTGATTAGCGATCTGAACAACAAGGACTACATCTTCGTCGTGAACAACCTGCTCAACTCGATCGACGCGGAAAAGAGCTACCGGCGCGTCAAGTCCGACATGGTGGCGATCTACCTGGNCAAGCAGGGACCGGCCAAGTGGGNCCACC  TGACGCTGACGGCCAAGCGGCTGCAGGACCTGAAGGACc                                                                                                                                                                                                                                                                ]
[+] EMBL BM593976             [                     ccgAACGCCAGTCCCGAAACGTGCGTGTACGTGCTTCTCAATTGTTGAACGATTTATCCCCCGCTGCGCAAGAAAACCTGTATTCCCGCGAGCTATCACACACAAGAATGTCTCGTGAAGCGATCGAAAATCTGACGCTGGACCTGGAGGAGATGCGCAAGCTGGCAGGGAGTGCCCAGCGCAGCCGGGTGCAACAGATGCTGGCCATCGACATTCGCAAGCTGGAGACGGACATACAGCGGCAGCGGGATCTGCTTGCCGCCCAGGCGGCCAGCAGCGAACAGACCGTTGCCCGACCGGTCCAGACCTCCGTCCCCGGTGACGTCCGGCGCTATCAGGTCGAGCTGAAGGAGTACGCGTGGGACCAGAGCGACAAGTTTATCAAAATCTTCGTGACGGTGAACGGCGTGCAGCAGGTGCCGGAAGATAACGTGAACGTGGAGTTTACCGAAAACTCGTTCCAGCTGGTGATTAGCGATCTGAACAACAAGGACTACATCTTCGTCGTGAACAACCTGCTCAACTCGATCGACGCGGAAAAGAGCTACCGGCGCGTCAAGTCCGACATGGTGGCGATCTACCTGGCCAAGCAGGGACCGGCCAAGTGGGCCCA CCTTGACGCTGACGGCCAAGCGGCTGCAGGACCTGAAGCACGAACGGATGTCGGAC                                                                                                                                                                                                                                                  ]
[+] EMBL BM628200             [                       ccgCGCCAGTCCCGAAACGTGCGTGTACGTGCTTCTCAATTGTTGAACGATTTATCCCCCGCTGCGCAAGAAAACCTGTATTCCCGCGAGCTATCACACACAAGAATGTCTCGTGAAGCGATCGAAAATCTGACGCTGGACCTGGAGGAGATGCGCAAGCTGGCAGGGAGTGCCCAGCGCAGCCGGGTGCAACAGATGCTGGCCATCGACATTCGCAAGCTGGAGACGGACATACAGCGGCAGCGGGATCTGCTTGCCGCCCAGGCGGCCAGCAGCGAACAGACCGTTGCCCGACCGGTCCAGACCTCCGTCCCCGGTGACGTCCGGCGCTATCAGGTCGAGCTGAAGGAGTACGCGTGGGACCAGAGCGACAAGTTTATCAAAATCTTCGTGACGGTGAACGGCGTGCAGCAGGTGCCGGAAGATAACGTGAACGTGGAGTTTACCGAAAACTCGTTCCAGCTGGTGATTAGCGATCTGAACAACAAGGACTA                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AGA281723            [                                                                              CCCCCGCTGCGCAAGAAAACCTGTATTCCCGCGAGCTATCACACACAAGAATGTCTCGTGAAGCGATCGAAAATCTGACGCTGGACCTGGAGGAGATGCGCAAGCTGGCAGGGAGTGCCCAGCGCAGCCGGGTGCAACAGATGCTGGCCATCGACATTCGCAAGCTGGAGACGGACATACAGCGGCAGCGGGATCTGCTTGCCGCCCAGGCGGCCAGCAGCGAACAGACCGTTGCCCGACCGGTCCAGACCTCCGTCCCCGGTGACGTCCGGCGCTATCAGGTCGAGCTGAAGGAGTACGCGTGGGACCAGAGCGACAAGTTTATCAAAATCTTCGTGACGGTGAACGGCGTGCAGCAGGTGCCGGAAGATAACGTGAACGTGGAGTTTACCGAAAACTCGTTCCAGCTGGTGATTAGCGATCTGAACAACAAGGACTACATCTTCGTCGGGAACAACCTGCTCAACTC                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX620046             [                                                                                                     TATTCCCGCGAGCTATCACACACAAGAATGTCTCGTGAAGCGATCGAAAATCTGACGCTGGACCTGGAGGAGATGCGCAAGCTGGCAGGGAGTGCCCAGCGCAGCCGGGTGCAACAGATGCTGGCCATCGACATTCGCAAGCTGGAGACGGACATACAGCGGCAGCGGGATCTGCTTGCCGCCCAGGCGGCCAGCAGCGAACAGACCGTTGCCCGACCGGTCCAGACCTCCGTCCCCGGTGACGTCCGGCGCTATCAGGTCGAGCTGAAGGAGTACGCGTGGGACCAGAGCGACAAGTTTATCAAAATCTTCGTGACGGTGAACGGCGTGCAGCAGGTGCCGGAAGATAACGTGAACGTGGAGTTTACCGAAAACTCGTTCCAGCTGGTGATTAGCGATCTGAACAACAAGGACTACATCTTCGTCGTGAACAACCTGCTCAACTCGATCGACGCGGAAAAGAGCTACCGGCGCGTCAAGTCCGACATGGTGGCGATCTACCTGGCCAAGCAGGGACCGGCCAAGTGGGCCCACC  TGACGCTGACGGCCAAGCGGCTGCAGGACCTGAAGGACGAACGGATGTCGGACGGGAAGAANGCGACGAGCGACGATCCGTCCGCCGGCCTGATGAA CATTATGCAGCAG CTGTACGAGTCGGGCGACCCGG AAC G AAGC GCAT  GAT C AA CAAGGcatggc                                                                                                                           ]
[+] EMBL AGA284840            [                                                                                                               AGCTATCACACACAAGAGTGTCTCGTGAAGCGATCGAAAATCTGACGCTGGACCTGGAGGAGATGCGCAAGCTGGCAGGGAGTGCCCAGCGCAGCCGGGTGCAACAGATGCTGGCCATCGACATTCGCAAGCTGGAGACGGACATACAGCGGCAGCGGGATCTGCTTGCCGCCCAGGCGGCCAGCAGCGAACAGACCGTTGCCCGACCGGTCCAGACCTCCGTCCCCGGTGACGTCCGGCGCTATCAGGTCGAGCTGAAGGAGTACGCGTGGGACCAGAGCGACAAGTTTATCAAAATCTTCGTGACGGTGAACGGGGTGCAGCAGGTGCCGGAAGATAACGTGAACGTGGAGTTTACCGAAAACTCGTTCCAGCTGGGGATTAGCGATCTGAACAACAAGGAC                                                                                                                                                                                                                                                                                                                                                                                                                                  ]


>consensus_8818#0 AGGCCAAGAATCGCGCACGAGGGAAACGCCAGTCCCGAAACGTGCGTGTACGTGCTTCTC AATTGTTGAACGATTTATCCCCCGCTGCGCAAGAAAACCTGTATTCCCGCGAGCTATCAC ACACAAGAATGTCTCGTGAAGCGATCGAAAATCTGACGCTGGACCTGGAGGAGATGCGCA AGCTGGCAGGGAGTGCCCAGCGCAGCCGGGTGCAACAGATGCTGGCCATCGACATTCGCA AGCTGGAGACGGACATACAGCGGCAGCGGGATCTGCTTGCCGCCCAGGCGGCCAGCAGCG AACAGACCGTTGCCCGACCGGTCCAGACCTCCGTCCCCGGTGACGTCCGGCGCTATCAGG TCGAGCTGAAGGAGTACGCGTGGGACCAGAGCGACAAGTTTATCAAAATCTTCGTGACGG TGAACGGCGTGCAGCAGGTGCCGGAAGATAACGTGAACGTGGAGTTTACCGAAAACTCGT TCCAGCTGGTGATTAGCGATCTGAACAACAAGGACTACATCTTCGTCGTGAACAACCTGC TCAACTCGATCGACGCGGAAAAGAGCTACCGGCGCGTCAAGTCCGACATGGTGGCGATCT ACCTGGCCAAGCAGGGACCGGCCAAGTGGGCCCACTGACGCTGACGGCCAAGCGGCTGCA GGACCTGAAGGACGAACGGATGTCGGACGGGAAGAAGGCGACGAGCGACGATCCGGTCGG CGGCCTGATTAACCATTATGCAGCAGACTGTACGATCGGGCGACCCGGAAACAGAAAGCG GCATTGGATNCGAACCAAGGGCTTAGGCACGAAGTTCGCAGAAGCGANAAAGCAAAAGAT GGCTAACCCCTNGGGANGCTTACGGTTGGGTACCGGGTNTTCCATGGGCCTTCGAATAGT AAGGTNTTAAAGGTTGTCCGCACACAGNT



consensusID : consensus_8818#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 600
fasta sequence
                              [CCGATCAATTCATCAGCAAGCGAAAAGGCTGAAACGCTAGTCCCGAAACGTGCGTGTGCGTGCTTCTCAATTGTTGGACGATTTTTCCCCCGCTGCGCAAGAAAACCTGTATTCCCGCGAGCTATCACACACAAGAATGTCTCGTGAAGCGATCGAAAATCTGACGCTGGACCTGGAGGAGATGCGCAAGCTGGCAGGGAGTGCCCAGCGCAGCCGGGTGCAACAGATGCTGGCCATCGACATTCGCAAGCTGGAGACGGACATACAGCGGCA-GCGGGATCTGCTTGCCGCCCAGGGCGGCCAGCAGCGAACAGACCGTTGCCCGACCGGTCCAGACCTCCGTCCCCGGTGACGTCCGGCGCTATCAGGTCGAGCTGAAGGAGTACGCGTGGGACCAGAGCGACAAGTTTATCAAAATCTTCGTGACGGTGAACGGCGTGCAGCAGGTGCCGGAAGATAACGTGAACGTGGAGTTTACCGAAAACTCGTTCCAGCTGGTGATTA-GCGATCTGAACAACAAGGACTACATCTTCGTCGTGAACAACCTGCTCAACTCGATCGACGCGGAAAAGAGCTACGGCGCGTCAAGTCCGACCATGG]

[+] EMBL BM616807             [CCGATCAATTCATCAGCAAGCGAAAAGGCTGAAACGCTAGTCCCGAAACGTGCGTGTGCGTGCTTCTCAATTGTTGGACGATTTTTCCCCCGCTGCGCAAGAAAACCTGTATTCCCGCGAGCTATCACACACAAGAATGTCTCGTGAAGCGATCGAAAATCTGACGCTGGACCTGGAGGAGATGCGCAAGCTGGCAGGGAGTGCCCAGCGCAGCCGGGTGCAACAGATGCTGGCCATCGACATTCGCAAGCTGGAGACGGACATACAGCGGCA GCGGGATCTGCTTGCCGCCCAGGGCGGCCAGCAGCGAACAGACCGTTGCCCGACCGGTCCAGACCTCCGTCCCCGGTGACGTCCGGCGCTATCAGGTCGAGCTGAAGGAGTACGCGTGGGACCAGAGCGACAAGTTTATCAAAATCTTCGTGACGGTGAACGGCGTGCAGCAGGTGCCGGAAGATAACGTGAACGTGGAGTTTACCGAAAACTCGTTCCAGCTGGTGATTA GCGATCTGAACAACAAGGACTA                                                                          ]
[+] EMBL AL929856             [          cgaggttAAGCGAAAAGGCTGAAACGCCAGTCCCGAAACGTGCGTGTACGTGCTTCTCAATTGTTGAACGATTTATCCCCCGCTGCGCAAGAAAACCTGTATTCCCGCGAGCTATCACACACAAGAATGTCTCGTGAAGCGATCGAAAATCTGACGCTGGACCTGGAGGAGATGCGCAAGCTGGCAGGGAGTGCCCAGCGCAGCCGGGTGCAACAGATGCTGGCCATCGACATTCGCAAGCTGGAGACGGACATACAGCGTTATGCGGGATCTGCTTGCCGCCCA GGCGGCCAGCAGCGAACAGACCGTTG CCGA CGGTCCAGACCTCCGTCCCCGGTGACGTCCGGCGCTATCAGGTCGAGCTGAAGGAGTACGCGTGGGACCAGAGCGACAAGTTTATCAAAATCTTCGTGACGGTGAACGGCGTGCAGCAGGTGCCGGAAGATAACGTGAACGTGGAGTTTACCGAAAACTCGTTCCAGCTGGTGATTACGCGATCTGAACAACAAGGACTACATCTTCGTCGTGAACAACCTGCTCAACTCGATCGACGCGGAAAAGAGCTACGGCGCGTCAAGTCCGACCATGG]


>consensus_8818#1 CCGATCAATTCATCAGCAAGCGAAAAGGCTGAAACGCTAGTCCCGAAACGTGCGTGTGCG TGCTTCTCAATTGTTGGACGATTTTTCCCCCGCTGCGCAAGAAAACCTGTATTCCCGCGA GCTATCACACACAAGAATGTCTCGTGAAGCGATCGAAAATCTGACGCTGGACCTGGAGGA GATGCGCAAGCTGGCAGGGAGTGCCCAGCGCAGCCGGGTGCAACAGATGCTGGCCATCGA CATTCGCAAGCTGGAGACGGACATACAGCGGCAGCGGGATCTGCTTGCCGCCCAGGGCGG CCAGCAGCGAACAGACCGTTGCCCGACCGGTCCAGACCTCCGTCCCCGGTGACGTCCGGC GCTATCAGGTCGAGCTGAAGGAGTACGCGTGGGACCAGAGCGACAAGTTTATCAAAATCT TCGTGACGGTGAACGGCGTGCAGCAGGTGCCGGAAGATAACGTGAACGTGGAGTTTACCG AAAACTCGTTCCAGCTGGTGATTAGCGATCTGAACAACAAGGACTACATCTTCGTCGTGA ACAACCTGCTCAACTCGATCGACGCGGAAAAGAGCTACGGCGCGTCAAGTCCGACCATGG



consensusID : consensus_8818#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 597
fasta sequence
                              [CAGGCAGAGTCGGCACGAGGCAAGCGAAAAGGCTGAAACGCTAGTCCCGAAACGTGCGTGTGCGTGCTTCTCAATTGTTGGACGATTTTTCCCCCGCTGCGCAAGAAAACCTGTATTCCCGCGAGCTATCACACACAAGAATGTCTCGTGAAGCGATCGAAAATCTGACGCTGGACCTGGAGGAGATGCGCAAGCTGGCAGGGAGTGCCCAGCGCAGCCGGGGTGCAACAGATGCTGGCCATCGACGATTCGCAAGCTGGAGACGGACATACAGCGGCAGCGGGATCTAGCTTGCCGACCAGGCGGCCAGCAGCGAACAGACCGTTGCNCCGACCGGTCCAGACCTCCGTCCCCGGTGACGTCCGGCGCTATCAGGTCGAGCTGAAGGAGTACGCGTGGGACCAGAGCGACAAGTTTATCGAAGAATCTTCGTGACGGTGAACGGNGTGCAGCAGGTGCCGGAAGATAAGCGTGAACGTGGAGTTTACCGAAAACTCGTTCCAGNCTGGTGATTAGCGATCGTGAACAACGAAGGACTAGCACTCTTCGTCGTGAACAACCTGCTCNANCTCGGATCGAGGGCGGGAACNACAGAGC]

[+] EMBL BX467569             [CAGGCAGAGTCGGCACGAGGCAAGCGAAAAGGCTGAAACGCTAGTCCCGAAACGTGCGTGTGCGTGCTTCTCAATTGTTGGACGATTTTTCCCCCGCTGCGCAAGAAAACCTGTATTCCCGCGAGCTATCACACACAAGAATGTCTCGTGAAGCGATCGAAAATCTGACGCTGGACCTGGAGGAGATGCGCAAGCTGGCAGGGAGTGCCCAGCGCAGCCGGGGTGCAACAGATGCTGGCCATCGACGATTCGCAAGCTGGAGACGGACATACAGCGGCAGCGGGATCTAGCTTGCCGACCAGGCGGCCAGCAGCGAACAGACCGTTGCNCCGACCGGTCCAGACCTCCGTCCCCGGTGACGTCCGGCGCTATCAGGTCGAGCTGAAGGAGTACGCGTGGGACCAGAGCGACAAGTTTATCGAAGAATCTTCGTGACGGTGAACGGNGTGCAGCAGGTGCCGGAAGATAAGCGTGAACGTGGAGTTTACCGAAAACTCGTTCCAGNCTGGTGATTAGCGATCGTGAACAACGAAGGACTAGCACTCTTCGTCGTGAACAACCTGCTCNANCTCGGATCGAGGGCGGGAACNACAGAGC]


>consensus_8818#2 CAGGCAGAGTCGGCACGAGGCAAGCGAAAAGGCTGAAACGCTAGTCCCGAAACGTGCGTG TGCGTGCTTCTCAATTGTTGGACGATTTTTCCCCCGCTGCGCAAGAAAACCTGTATTCCC GCGAGCTATCACACACAAGAATGTCTCGTGAAGCGATCGAAAATCTGACGCTGGACCTGG AGGAGATGCGCAAGCTGGCAGGGAGTGCCCAGCGCAGCCGGGGTGCAACAGATGCTGGCC ATCGACGATTCGCAAGCTGGAGACGGACATACAGCGGCAGCGGGATCTAGCTTGCCGACC AGGCGGCCAGCAGCGAACAGACCGTTGCNCCGACCGGTCCAGACCTCCGTCCCCGGTGAC GTCCGGCGCTATCAGGTCGAGCTGAAGGAGTACGCGTGGGACCAGAGCGACAAGTTTATC GAAGAATCTTCGTGACGGTGAACGGNGTGCAGCAGGTGCCGGAAGATAAGCGTGAACGTG GAGTTTACCGAAAACTCGTTCCAGNCTGGTGATTAGCGATCGTGAACAACGAAGGACTAG CACTCTTCGTCGTGAACAACCTGCTCNANCTCGGATCGAGGGCGGGAACNACAGAGC



consensusID : consensus_8818#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 350
fasta sequence
                              [TGCAGGACCTGAAGGACGAACGGATGTCGGACGGGAAGAAGGCGACGAGCGACGATCCGTCCGCCGGCCTGATGAACATTATGCAGCAGCTGTACGAGTCGGGCGACCCGGAAACGAAGCGCATGATCAACAAGGCATGGCACGAGTCGCAGACGAAGCAAAAAATGCCTACCCTGGAGTAGGGTGGGTGCGGGGTGTTCCATGGCCCTTCGTAATGTAGGTGTAAGGTTTATTTGACAAGTTCCATCTCATACATAACCGAAAAGTGGAGTAGAGCGCGTAATGGTCAACGTAAACTGTATTTGTAAGTCGAATTAAAATAAATTGTAACAATAACCGGCTAAAAAAAA]

[-] EMBL AGA283550            [TGCAGGACCTGAAGGACGAACGGATGTCGGACGGGAAGAAGGCGACGAGCGACGATCCGTCCGCCGGCCTGATGAACATTATGCAGCAGCTGTACGAGTCGGGCGACCCGGAAACGAAGCGCATGATCAACAAGGCATGGCACGAGTCGCAGACGAAGCAAAAAATGCCTACCCTGGAGTAGGGTGGGTGCGGGGTGTTCCATGGCCCTTCGTAATGTAGGTGTAAGGTTTATTTGACAAGTTCCATCTCATACATAACCGAAAAGTGGAGTAGAGCGCGTAATGGTCAACGTAAACTGTATTTGTAAGTCGAATTAAAATAAATTGTAACAATAACCGGCTAAAAAAAA]
[-] EMBL AGA280027            [                   ACGGATGTCGGACGGGAAGAAGGCGACGAGCGACGATCCGTCCGCCGGCCTGATGAACATTATGCAGCAGCTGTACGAGTCGGGCGACCCGGAAACGAAGCGCATGATCAACAAGGCATGGCACGAGTCGCAGACGAAGCAAAAAATGCCTACCCTGGAGTAGGGTGGGTGCGGGGTGTTCCATGGCCCTTCGTAATGTAGGTGTAAGGTTTGTTCGACAAGTTCCATTTCATACATAAGCGAATAGTGGAGTAGAGCGCGTAATGGTCAACGTAAACTGTATTTGTAAGTCGAATTAAAATAAATTGTAACAATAACCGGCAAAAAAAA ]


>consensus_8818#3 TGCAGGACCTGAAGGACGAACGGATGTCGGACGGGAAGAAGGCGACGAGCGACGATCCGT CCGCCGGCCTGATGAACATTATGCAGCAGCTGTACGAGTCGGGCGACCCGGAAACGAAGC GCATGATCAACAAGGCATGGCACGAGTCGCAGACGAAGCAAAAAATGCCTACCCTGGAGT AGGGTGGGTGCGGGGTGTTCCATGGCCCTTCGTAATGTAGGTGTAAGGTTTATTTGACAA GTTCCATCTCATACATAACCGAAAAGTGGAGTAGAGCGCGTAATGGTCAACGTAAACTGT ATTTGTAAGTCGAATTAAAATAAATTGTAACAATAACCGGCTAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8818#1      CCGATCAATTCATCA----GCAAGCGAAAAGGCTGAAACGCTAGTCCCGAAACGTGCGTG 56
consensus_8818#2      CAGGCAGAGTCGGCACGAGGCAAGCGAAAAGGCTGAAACGCTAGTCCCGAAACGTGCGTG 60
consensus_8818#0      ------AGGCCAAGA---ATCGCGCACGAGGG---AAACGCCAGTCCCGAAACGTGCGTG 48
consensus_8818#3      ------------------------------------------------------------
                                                                                  

consensus_8818#1      TGCGTGCTTCTCAATTGTTGGACGATTTTTCCCCCGCTGCGCAAGAAAACCTGTATTCCC 116
consensus_8818#2      TGCGTGCTTCTCAATTGTTGGACGATTTTTCCCCCGCTGCGCAAGAAAACCTGTATTCCC 120
consensus_8818#0      TACGTGCTTCTCAATTGTTGAACGATTTATCCCCCGCTGCGCAAGAAAACCTGTATTCCC 108
consensus_8818#3      ------------------------------------------------------------
                                                                                  

consensus_8818#1      GCGAGCTATCACACACAAGAATGTCTCGTGAAGCGATCGAAAATCTGACGCTGGACCTGG 176
consensus_8818#2      GCGAGCTATCACACACAAGAATGTCTCGTGAAGCGATCGAAAATCTGACGCTGGACCTGG 180
consensus_8818#0      GCGAGCTATCACACACAAGAATGTCTCGTGAAGCGATCGAAAATCTGACGCTGGACCTGG 168
consensus_8818#3      ------------------------------------------------TGCAGGACCTGA 12
                                                                       ** ******* 

consensus_8818#1      AGGAGATGCGCAAGCTGG-CAGGGAGTGCCCAGCGCAGCCGGG-TGCAACAGATGCTGGC 234
consensus_8818#2      AGGAGATGCGCAAGCTGG-CAGGGAGTGCCCAGCGCAGCCGGGGTGCAACAGATGCTGGC 239
consensus_8818#0      AGGAGATGCGCAAGCTGG-CAGGGAGTGCCCAGCGCAGCCGGG-TGCAACAGATGCTGGC 226
consensus_8818#3      AGGACGAACGGATGTCGGACGGGAAGAAGGCGACG-AGCGACGATCCGTC---CGCCGGC 68
                      ****    ** * *  ** * ** **    *  ** ***   * * *  *    ** ***

consensus_8818#1      CATCGAC-ATTCGCAAGCTGGAGACGGACATACAGCGGCAGCGGGATCT-GCTTGCCGCC 292
consensus_8818#2      CATCGACGATTCGCAAGCTGGAGACGGACATACAGCGGCAGCGGGATCTAGCTTGCCGAC 299
consensus_8818#0      CATCGAC-ATTCGCAAGCTGGAGACGGACATACAGCGGCAGCGGGATCT-GCTTGCCGCC 284
consensus_8818#3      C--TGATGAACATTATGCAGCAGCTGTACGAGTCGGGCGACCCGGAAAC-----GAAGCG 121
                      *   **  *     * ** * **  * **     * *  * * ***        *  *  

consensus_8818#1      CAGGGCGGCCAGCAGCGAACAGACCGTTGCCC-GACCGGTCCAGACCTCCGTCCCCGGTG 351
consensus_8818#2      CAGG-CGGCCAGCAGCGAACAGACCGTTGCNCCGACCGGTCCAGACCTCCGTCCCCGGTG 358
consensus_8818#0      CAGG-CGGCCAGCAGCGAACAGACCGTTGCCC-GACCGGTCCAGACCTCCGTCCCCGGTG 342
consensus_8818#3      CATG---ATCAACAAGGCATGGCACGAGTCGCAGACGAAGCAAAAAATGCCTACCC--TG 176
                      ** *     ** **  * *  *  **   * * ***    * * *  * * * ***  **

consensus_8818#1      ACGTCCGGCGCTATCAGGTCGAGCTGAAGGAGTACGCGTGGGACCAGAGCGACAAGTTTA 411
consensus_8818#2      ACGTCCGGCGCTATCAGGTCGAGCTGAAGGAGTACGCGTGGGACCAGAGCGACAAGTTTA 418
consensus_8818#0      ACGTCCGGCGCTATCAGGTCGAGCTGAAGGAGTACGCGTGGGACCAGAGCGACAAGTTTA 402
consensus_8818#3      GAGTAGGGTGGGTGCGGGGTGTTCCATGGCCCTTCGTA----ATGTAGGTGTAAGGTTTA 232
                        **  ** *    * **  *  *    *   * **      *     * *  * *****

consensus_8818#1      TCAAA--ATCTTCGTGACGGTGAACGGCGTGCAGCAGGTGCCGGAAGATAA-CGTGAACG 468
consensus_8818#2      TCGAAGAATCTTCGTGACGGTGAACGGNGTGCAGCAGGTGCCGGAAGATAAGCGTGAACG 478
consensus_8818#0      TCAAA--ATCTTCGTGACGGTGAACGGCGTGCAGCAGGTGCCGGAAGATAA-CGTGAACG 459
consensus_8818#3      TTTGACAAGTTCCATCTCATACATAACCGAAAAGTGGAGTAGAGCGCGTAATGGTCAACG 292
                      *   *  *  * * *  *    *     *   **  *      *    ***  ** ****

consensus_8818#1      TGGAGTTTACCGAAAACTCGTTCCAGC-TGGTGATTAGCGATC-TGAACAAC-AAGGACT 525
consensus_8818#2      TGGAGTTTACCGAAAACTCGTTCCAGNCTGGTGATTAGCGATCGTGAACAACGAAGGACT 538
consensus_8818#0      TGGAGTTTACCGAAAACTCGTTCCAGC-TGGTGATTAGCGATC-TGAACAAC-AAGGACT 516
consensus_8818#3      TAAACTGTATTTGTAAGTCGAATTAAA---ATAAATTGTAACAATAACCGGCTAAAAAAA 349
                      *  * * **     ** ***    *      * * * *  *   * * *  * **  *  

consensus_8818#1      A-CA-TCTTCGTCGTGAACAACCTGCTCAACTC--GATCGACGCGGAAAAGAGCTAC-GG 580
consensus_8818#2      AGCACTCTTCGTCGTGAACAACCTGCTCNANCTCGGATCGA---GGGCGGGAACNAC-AG 594
consensus_8818#0      A-CA-TCTTCGTCGTGAACAACCTGCTCAACTC--GATCGACGCGGAAAAGAGCTACCGG 572
consensus_8818#3      A----------------------------------------------------------- 350
                      *                                                           

consensus_8818#1      CGCGTCAAGTCCGACCATGG---------------------------------------- 600
consensus_8818#2      AGC--------------------------------------------------------- 597
consensus_8818#0      CGCGTCAAGTCCGACATGGTGGCGATCTACCTGGCCAAGCAGGGACCGGCCAAGTGGGCC 632
consensus_8818#3      ------------------------------------------------------------
                                                                                  

consensus_8818#1      ------------------------------------------------------------
consensus_8818#2      ------------------------------------------------------------
consensus_8818#0      CACTGACGCTGACGGCCAAGCGGCTGCAGGACCTGAAGGACGAACGGATGTCGGACGGGA 692
consensus_8818#3      ------------------------------------------------------------
                                                                                  

consensus_8818#1      ------------------------------------------------------------
consensus_8818#2      ------------------------------------------------------------
consensus_8818#0      AGAAGGCGACGAGCGACGATCCGGTCGGCGGCCTGATTAACCATTATGCAGCAGACTGTA 752
consensus_8818#3      ------------------------------------------------------------
                                                                                  

consensus_8818#1      ------------------------------------------------------------
consensus_8818#2      ------------------------------------------------------------
consensus_8818#0      CGATCGGGCGACCCGGAAACAGAAAGCGGCATTGGATNCGAACCAAGGGCTTAGGCACGA 812
consensus_8818#3      ------------------------------------------------------------
                                                                                  

consensus_8818#1      ------------------------------------------------------------
consensus_8818#2      ------------------------------------------------------------
consensus_8818#0      AGTTCGCAGAAGCGANAAAGCAAAAGATGGCTAACCCCTNGGGANGCTTACGGTTGGGTA 872
consensus_8818#3      ------------------------------------------------------------
                                                                                  

consensus_8818#1      ---------------------------------------------------------
consensus_8818#2      ---------------------------------------------------------
consensus_8818#0      CCGGGTNTTCCATGGGCCTTCGAATAGTAAGGTNTTAAAGGTTGTCCGCACACAGNT 929
consensus_8818#3      ---------------------------------------------------------
                                                                               




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)