cluster # 8836

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Anopheles gambiae
cluster # 8836 cluster # 8836 Sequences # 12 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8836#0 length = 1595 sequences # 7
consensus_8836#1 length = 1266 sequences # 1

consensus_8836#2 length = 663 sequences # 1
consensus_8836#3 length = 448 sequences # 2
consensus_8836#4 length = 306 sequences # 1

consensusID : consensus_8836#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1595
fasta sequence

                              [CGACCCACGCGTCCGCCCACGCGTCCGGCAATGCCCGTCAGCCGCAGTAGTGGCAGTCGTCACACATACACCTTGCGGAAAAGATTAAATTGTAACTCTCTTGTTTCTCTCTCTACGCTAATGGTGGGAGTGCGCGCCGAATTGCTTACATCTGGATAGATACAACGGGCAGCAGACTAATGCTGCCTCAACACGTTATTCTTCTCCCTTCTGCGCATTGCATAGCGCATTATACATTATTCTTAAATGGTTTTCGGCAATAATCACCTACAAGTTTGTATTTATTATATTTATTA--TTTTTCCTTGCTTACCATATCATGTTGTTATTATCGCAAACGAAATTCACATTTACAGTGCAGTAAATGGTGTATATCCAACGGTTTACTCAGTAACAAAAATAGTGAAATCTGTTAATCGATCAATCGGCTTTCCGTTAAAGAAACGCAAATTATGAGTTGGGTTGGAAATTGGACGGTTAAGAGAGGATTAATTCATGCATTTGTAGAAGAAACTGCGTACATGCAAATAGCGAAACAAATAGGAATGGTTTTGGTTGGAAGAAATCGAAATTAAACAAGCTGCAACCAATTTAGCGAAGGGAACGATAGCGATCATCGTACCGACACGAAGAAACAACTAGCCAAGAGCATTTGAAACTCAAAGTCACAGTTTTGCATATGTTTTCGCTGCTATCTAAGACTCATTTGCAATG-----TTTTTTTTCGTTGTTGTATCATGTAAATCAATATAAAGGATAGATGATTGTTCTTGCAATAGATAGTTCACAACCGCTGACCATTCGGATACACA-CATGGCTCGTTATTTTTCGGTGAAGGTTTGTGATTGAAAGTTCCTTAAGCG-AAAAAAAAACAACAAAAAATCCTGAAAAAAAGAAAAACAATAAAAATAGAATCAATGCAAGTTAGTAAAACAATTACAGAGAGAATAGCAAAACCACAGATTAAGGAGCAGAGGAAGAAAAAAATAGAGCATTACAGTATGGAATTTGGAGTCAAGTAATACATCAAGAGTATAGAAATATAATCGTTTCATTGAATACTGGTCGTACATTGCAGGCAGCGTAAAAATAAATAGAAAACGAAGCATGATATATGAAGCATGTTCTGCTCTGAACGAAGGAGATCACGAGCAAAACTCTGTAACCCTGCTATACATATGTGTGCTACGGTGAGTGTGTCGTACAGTCATGCGTATGTAATTGAGAATGCAAATAGGAACAAAAAGGAAGTCGTCTGCTACACATGGAAATATTCCAAATTATGATCGTCACATGAAATGGCATACAGATCCAACAGAGATAGCTTAGCCCGATACACAATTACTAGCCCGATTATCCTGAAGTACTCCTTTAAGTATGGAACACACAAGCAGAGGATTCTCATTTTAATAGATCATTTCAGTGTATTTAAACAGTTTGGAATTCCATGCTGTTGGCTTGGTTTGGAGTTCTTTTGAGTGGCATTCGATAGTCTTCATTGAAGCTGTACGACGTGAAATGGCAAAAGATATCTCGATTTACCCTAAGCAAACTATAGGTAATAAAACTTGCACTCACTCACACACATACACAAACCATA]

[+] EMBL BM597505             [CGACCCACGCGTCCGCCCACGCGTCCGGCAATGCCCGTCAGCCGCAGTAGTGGCAGTCGTCACACATACACCTTGCGGAAAAGATTAAATTGTAACTCTCTTGTTTCTCTCTCTACGCTAATGGTGGGAGTGCGCGCCGAATTGCTTACATCTGGATAGATACAACGGGCAGCAGACTAATGCTGCCTCAACACGTTATTCTTCTCCCTTCTGCGCATTGCATAGCGCATTATACATTATTCTTAAATGGTTTTCGGCAATAATCACCTACAAGTTTGTATTTATTATATTTATTA  TTTTTCCTTGCTTACCATATCATGTTGTTATTATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX628464             [                                                                                                                                                                                                      TTCTTCTCCCTTCTGCGCATTGCATAGCGCATTATACATTATTCTTAAATGGTTTTCGGCAATAATCAGCTACAAGTTTGTATTTATTATATTTATTATTTTTTTCCTTGCTTATCATATCATGTTGTTATTATCGCAAACGAAATTCACATTTACAGTGCAGTAAATGGTGTATATCCAACGGTTTACTCAGTAACAAAAATAGTGAAATCTGTTAATCGATCAATCGGCTTTCCGTTAAAGAAACGCAAATTATGAGTTGGGTTGGAAATTGGACGGTTAAGAGAGGATTAATTCATGCATTTGTAGAAGAAACTGCGTACATGCAAATAGCGAAACAAATAGGAATGGTTTTGGTTGGAAGAAATCGAAATTAAACAAGCTGCAACCAATTTAGCGAAGGGAACGATAGCGATCATCGTACCGACACGAAGAAACAACTAGCCAAGAGCATTTGAAACTCAAAGTCACAGTTTTGCATATGTTTTCGCTGCTATCTAAGACTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL AGA282372            [                                                                                                                                                                                                                                                                                                                                                                                                               ATAGTGAAATCTGTTAATCGATCAATCGGTTTTCCGTTAAAGAAACGCAAATTATGAGTTGGGTTGGAAATTGGACGGTTAAGAGAGGATTAATTCATGCATTTGTAGAAGAAACTGCGTACATGCAAATTGCGAAACAAATAGGAATGGTTTTGGTTGGAAGAAATCGAAATTAAACAAGCTGCAACCAATTTAGCGAAGGGAACGATAGCGATCATCGTACCGACACGAAGAAACAACTAGCCAAGAGCATTTGAAACTCAAAGTCACAGTTTTGTATATGTTTTCGCTGCTATCTAAGACTCATTTGCAATGTTTTTTTTTTTTTTGTTGTTGTATCATGTAAATCAATATAAAGGATAGATGATTGTTCTTGCAATAGATAGTTCACAACCGCTGACCATTCGGATACACA CATGGCTCGTTATTTTTCGGTGAAGGTTTGTGATTGAAAGTTCCTTAAGCG AAAAAAAAACAACAAAAAATCCTa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL AGA284797            [                                                                                                                                                                                                                                                                                                                                                                                                                                                CCGTTAAAGAAACGCAAATTATGAGTTGGGTTGGAAATTGGACGGTTAAGAGAGGATTAATTCATGCCTTTGTAGAAGAAACTGCGTACATGCAAATAGCGAAACAAATAGGAATGGTTTTGGTTGGAAGAAATCGAAATTAAACAAGCTGCAACCAATTTAGCGAAGGGAACGATAGCGATCATCGTACGGACACGAAGAAACAACTAGCCAAGAGCATTTGAAACTCAAAGTCACAGTTTTGCATATGTTTTCGCTGCTATCTAAGACTCATTTGCAATG     TTTTTTTTCGTTGTTGTATCATGTAAATCAATATAAAGGATAGATGATTGTTCTTGCAATAGATAGTTCACAACCGCTGACCATTCGGATACATATCTTGGCTCGTTATTTTTGGGTGAAGGTTTGTGATTGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL BM587781             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAATTGGACGGTTAAGAGAGGATTAATTCATGCATTTGTAGAAGAAACTGCGTACATGCAAATAGCGAAACAAATAGGAATGGTTTTGGTTGGAAGAAATCGAAATTAAACAAGCTGCAACCAATTTAGCGAAGGGAACGATAGCGATCATCGTTCCGACCCGAAGAAACAACTAGCCAAGAGCATTTGAAACTCAAAGTCACAGTTTTGCATATGTTTTCGCTGCTATCTAATACTCATTTGCAATG     TTTTTTTTCGTTGTTGTATCATGTAAATCAATATAAAGGATAGATGATTGTTCTTGCAATAGATAGTTCACAACCGCTGACCATTCGGATACACA CATGGCTCGTTATTTTTCGGTGAAGGTTTGTGATTGAAAGTTCCTTAAGCG AAAAAAAAACAACAAAAAATCCTGAAAAAAAGAAAAACAATAAAAATAGAATCAATGCAAGTTAGTAAAACAATTACAGAGAGAATAGCAAAACCCCAGATTAAGGAGCAGAGGAAGAAAAAAATAGAGCATTACAGTATGGAATTTGGAGTCAAGTAATACATCAAGAGTATAGAAATATAATCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX614304             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAGTTTTGCATATGTTTCCGCTGCTATCTAAGACTCATTTGCAATG     TTTTTTTTCGTTGTTGTATCATGTAAATCAATATAAAGGATAGATGATTGTTCTTGCAATAGATAGTTCACAACCGCTGACCATTCGGATATACA CATGGCTCGTTATTTTTCGGTGAAGGTTTGTGATTGAAAGTTCCTTAAGCGAAAAAAAAAACAACAAAAAATCCTGAAAAAAAGAAAAACAATAAAAATAGAATCAATGCAAGTTAGTAAAACAATTACAGAGAGAATAGCAAAACCACAGATTAAGGAGCAGAGGAAGAAAAAAATAGAGCATTACAGTATGGAATTTGGAGTCAAGTAATACATCAAGAGTATAGAAATATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX608787             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TAGCAAAACCACAGATTAAGGAGCAGAGGAAGAAAAAAATAGAGCATTACAGTATGGAATTTGGAGTCAAGTAATACATCAAGAGTATAGAAATATAATCGTTTCATTGAATACTGGTCGTACATTGCAGGCAGCGTAAAAATAAATAGAAAACGAAGCATGATATATGAAGCATGTTCTGCTCTGAACGAAGGAGATCACGAGCAAAACTCTGTAACCCTGCTATACATATGTGTGCTACGGTGAGTGTGTCGTACAGTCATGCGTATGTAATTGAGAATGCAAATAGGAACAAAAAGGAAGTCGTCTGCTACACATGGAAATATTCCAAATTATGATCGTCACATGAAATGGCATACAGATCCAACAGAGATAGCTTAGCCCGATACACAATTACTAGCCCGATTATCCTGAAGTACTCCTTTAAGTATGGAACACACAAGCAGAGGATTCTCATTTTAATAGATCATTTCAGTGTATTTAAACAGTTTGGAATTCCATGCTGTTGGCTTGGTTTGGAGTTCTTTTGAGTGGCATTCGATAGTCTTCATTGAAGCTGTACGACGTGAAATGGCAAAAGATATCTCGATTTACCCTAAGCAAACTATAGGTAATAAAACTTGCACTCACTCACACACATACACAAACCATA]




>consensus_8836#0
CGACCCACGCGTCCGCCCACGCGTCCGGCAATGCCCGTCAGCCGCAGTAGTGGCAGTCGT
CACACATACACCTTGCGGAAAAGATTAAATTGTAACTCTCTTGTTTCTCTCTCTACGCTA
ATGGTGGGAGTGCGCGCCGAATTGCTTACATCTGGATAGATACAACGGGCAGCAGACTAA
TGCTGCCTCAACACGTTATTCTTCTCCCTTCTGCGCATTGCATAGCGCATTATACATTAT
TCTTAAATGGTTTTCGGCAATAATCACCTACAAGTTTGTATTTATTATATTTATTATTTT
TCCTTGCTTACCATATCATGTTGTTATTATCGCAAACGAAATTCACATTTACAGTGCAGT
AAATGGTGTATATCCAACGGTTTACTCAGTAACAAAAATAGTGAAATCTGTTAATCGATC
AATCGGCTTTCCGTTAAAGAAACGCAAATTATGAGTTGGGTTGGAAATTGGACGGTTAAG
AGAGGATTAATTCATGCATTTGTAGAAGAAACTGCGTACATGCAAATAGCGAAACAAATA
GGAATGGTTTTGGTTGGAAGAAATCGAAATTAAACAAGCTGCAACCAATTTAGCGAAGGG
AACGATAGCGATCATCGTACCGACACGAAGAAACAACTAGCCAAGAGCATTTGAAACTCA
AAGTCACAGTTTTGCATATGTTTTCGCTGCTATCTAAGACTCATTTGCAATGTTTTTTTT
CGTTGTTGTATCATGTAAATCAATATAAAGGATAGATGATTGTTCTTGCAATAGATAGTT
CACAACCGCTGACCATTCGGATACACACATGGCTCGTTATTTTTCGGTGAAGGTTTGTGA
TTGAAAGTTCCTTAAGCGAAAAAAAAACAACAAAAAATCCTGAAAAAAAGAAAAACAATA
AAAATAGAATCAATGCAAGTTAGTAAAACAATTACAGAGAGAATAGCAAAACCACAGATT
AAGGAGCAGAGGAAGAAAAAAATAGAGCATTACAGTATGGAATTTGGAGTCAAGTAATAC
ATCAAGAGTATAGAAATATAATCGTTTCATTGAATACTGGTCGTACATTGCAGGCAGCGT
AAAAATAAATAGAAAACGAAGCATGATATATGAAGCATGTTCTGCTCTGAACGAAGGAGA
TCACGAGCAAAACTCTGTAACCCTGCTATACATATGTGTGCTACGGTGAGTGTGTCGTAC
AGTCATGCGTATGTAATTGAGAATGCAAATAGGAACAAAAAGGAAGTCGTCTGCTACACA
TGGAAATATTCCAAATTATGATCGTCACATGAAATGGCATACAGATCCAACAGAGATAGC
TTAGCCCGATACACAATTACTAGCCCGATTATCCTGAAGTACTCCTTTAAGTATGGAACA
CACAAGCAGAGGATTCTCATTTTAATAGATCATTTCAGTGTATTTAAACAGTTTGGAATT
CCATGCTGTTGGCTTGGTTTGGAGTTCTTTTGAGTGGCATTCGATAGTCTTCATTGAAGC
TGTACGACGTGAAATGGCAAAAGATATCTCGATTTACCCTAAGCAAACTATAGGTAATAA
AACTTGCACTCACTCACACACATACACAAACCATA

consensusID : consensus_8836#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1266
fasta sequence

                              [ATTTTCCACCAGTAGANCTTCCCAGGTTNCTGACAAATCGGTTTCCNGCCTAAAGAAATANCACATTATAGAGTTGGGTTGGAAATTGGACGGTNGAAGAGAGGATTAATTCATGCATATTGTAGAAGAAACTGCGTACATAGCAAATTGCGAAACAAATAGGAATGGTTTATTGGTATGGACAGAAATCGAANTTAAACAAGCTGCAACCACATTTAGCCGAAGTGGCAACTGATAGCGATCATCTGTACCGACACGAAAGAAAACAACTAGCCANAGAGCATTTCGCAACCTCACAGGTCCCNCGTTATGCNTATCGTACCCCCCCTTGGCGCTACTCCCTAAANGGAACGTTCCAACTATTGGCACAGTGGTTTATCACANNACNGACACACACCCCCCACGNTCGCAACGGNACATCCCNCGGTTCAACCTCCANATACTANCAAAGGATAACACATCGACAAAGGTAANCNCNGGCACACAAGAATAAGTACAACAAAAACCGCGATNNAAACCAAAACNCGCGCCTACACCACCAACACATNNGTAGACNNCCACAAAAAAAAACNCATATCCACCCTCTACACAACCAACATTNCTTCCCTCGACCATCCNACCACAACCAACATAATCCCCACTNTTAAAAACACNACTCAACACANCAACNANCATCACCACNCCCACCNAAAACTACNCAATNCCCCACTTANAATATANCAAATCCAAACCCNCCACATCTACACNCANAATTATCCACACCCCATACAACACACNCCCATCCAANNTNCCAACCCCACACCACCATCAAACACAACCTACCCNCCCCNCCCCCNCACCCCCNCCNACACTCNCTCNANAACNAANAANNACACCACACACCACCNAAAACAATAAAAACAACANAAAAAACAATACNATATCNACAATANACNATCCCCACNATCCCCNCACANCCCANATCAACACATACANACAANTCAAANNAACACCCAATAATNAACATTAATNNTAATCAACAANTATANATNACCAAANCCNANACTAAACTACCAACAANCAACATCNACTANCCATCNCTTNCNTCCCCACACACACCTACACTAAGCCCCACNCAACACAACANACTCTATAACAAAAACCNNAATANTACATCAATCAANCTANTAACAACCANTAAACATATACATAACACAAAACAACAAAAANACAACCANCNAACACNTTTCTATAACCAAAAACAAAAATAAAACCCAANAAACTCAC]

[+] EMBL AL696095             [ATTTTCCACCAGTAGANCTTCCCAGGTTNCTGACAAATCGGTTTCCNGCCTAAAGAAATANCACATTATAGAGTTGGGTTGGAAATTGGACGGTNGAAGAGAGGATTAATTCATGCATATTGTAGAAGAAACTGCGTACATAGCAAATTGCGAAACAAATAGGAATGGTTTATTGGTATGGACAGAAATCGAANTTAAACAAGCTGCAACCACATTTAGCCGAAGTGGCAACTGATAGCGATCATCTGTACCGACACGAAAGAAAACAACTAGCCANAGAGCATTTCGCAACCTCACAGGTCCCNCGTTATGCNTATCGTACCCCCCCTTGGCGCTACTCCCTAAANGGAACGTTCCAACTATTGGCACAGTGGTTTATCACANNACNGACACACACCCCCCACGNTCGCAACGGNACATCCCNCGGTTCAACCTCCANATACTANCAAAGGATAACACATCGACAAAGGTAANCNCNGGCACACAAGAATAAGTACAACAAAAACCGCGATNNAAACCAAAACNCGCGCCTACACCACCAACACATNNGTAGACNNCCACAAAAAAAAACNCATATCCACCCTCTACACAACCAACATTNCTTCCCTCGACCATCCNACCACAACCAACATAATCCCCACTNTTAAAAACACNACTCAACACANCAACNANCATCACCACNCCCACCNAAAACTACNCAATNCCCCACTTANAATATANCAAATCCAAACCCNCCACATCTACACNCANAATTATCCACACCCCATACAACACACNCCCATCCAANNTNCCAACCCCACACCACCATCAAACACAACCTACCCNCCCCNCCCCCNCACCCCCNCCNACACTCNCTCNANAACNAANAANNACACCACACACCACCNAAAACAATAAAAACAACANAAAAAACAATACNATATCNACAATANACNATCCCCACNATCCCCNCACANCCCANATCAACACATACANACAANTCAAANNAACACCCAATAATNAACATTAATNNTAATCAACAANTATANATNACCAAANCCNANACTAAACTACCAACAANCAACATCNACTANCCATCNCTTNCNTCCCCACACACACCTACACTAAGCCCCACNCAACACAACANACTCTATAACAAAAACCNNAATANTACATCAATCAANCTANTAACAACCANTAAACATATACATAACACAAAACAACAAAAANACAACCANCNAACACNTTTCTATAACCAAAAACAAAAATAAAACCCAANAAACTCAC]




>consensus_8836#1
ATTTTCCACCAGTAGANCTTCCCAGGTTNCTGACAAATCGGTTTCCNGCCTAAAGAAATA
NCACATTATAGAGTTGGGTTGGAAATTGGACGGTNGAAGAGAGGATTAATTCATGCATAT
TGTAGAAGAAACTGCGTACATAGCAAATTGCGAAACAAATAGGAATGGTTTATTGGTATG
GACAGAAATCGAANTTAAACAAGCTGCAACCACATTTAGCCGAAGTGGCAACTGATAGCG
ATCATCTGTACCGACACGAAAGAAAACAACTAGCCANAGAGCATTTCGCAACCTCACAGG
TCCCNCGTTATGCNTATCGTACCCCCCCTTGGCGCTACTCCCTAAANGGAACGTTCCAAC
TATTGGCACAGTGGTTTATCACANNACNGACACACACCCCCCACGNTCGCAACGGNACAT
CCCNCGGTTCAACCTCCANATACTANCAAAGGATAACACATCGACAAAGGTAANCNCNGG
CACACAAGAATAAGTACAACAAAAACCGCGATNNAAACCAAAACNCGCGCCTACACCACC
AACACATNNGTAGACNNCCACAAAAAAAAACNCATATCCACCCTCTACACAACCAACATT
NCTTCCCTCGACCATCCNACCACAACCAACATAATCCCCACTNTTAAAAACACNACTCAA
CACANCAACNANCATCACCACNCCCACCNAAAACTACNCAATNCCCCACTTANAATATAN
CAAATCCAAACCCNCCACATCTACACNCANAATTATCCACACCCCATACAACACACNCCC
ATCCAANNTNCCAACCCCACACCACCATCAAACACAACCTACCCNCCCCNCCCCCNCACC
CCCNCCNACACTCNCTCNANAACNAANAANNACACCACACACCACCNAAAACAATAAAAA
CAACANAAAAAACAATACNATATCNACAATANACNATCCCCACNATCCCCNCACANCCCA
NATCAACACATACANACAANTCAAANNAACACCCAATAATNAACATTAATNNTAATCAAC
AANTATANATNACCAAANCCNANACTAAACTACCAACAANCAACATCNACTANCCATCNC
TTNCNTCCCCACACACACCTACACTAAGCCCCACNCAACACAACANACTCTATAACAAAA
ACCNNAATANTACATCAATCAANCTANTAACAACCANTAAACATATACATAACACAAAAC
AACAAAAANACAACCANCNAACACNTTTCTATAACCAAAAACAAAAATAAAACCCAANAA
ACTCAC

consensusID : consensus_8836#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 663
fasta sequence

                              [CCGCCCACGCGTCCGAAAAAAGAAAAACAATAAAAATAGAATCAATGCAAGTTAGTAAAACAATTACAGAGAGAACAGCAAAACCACAGATTAAGGAGCAGAGGAAGAAAAAAATAGAGCATTACAGTATGGAATTTGGAGTCAAATAATACATCAAGAGTATAGAAATATAATCGTTTCATTGAATACTGGTCGTACATTGCAGGCAGCGTAAAAATAAATAGAAAACGAAGCATGATATATGAAGCATGTTCTGCTCTGAACGAAGGAGATCACGAGCAAAACTCTGTAACCCTGCTATACATATGTGTGCTACGGTGAGTGTGTCGTACAGTCATGCGTATGTAATTGAGAATGCAAATAGGAACAAAAAGAAAGTCGTCTGCTACACATGGAAATATTCCAAATTATGATCGTCACATGAAATGGCATACAGATCCAACAGAGATAGCTTAGCCCGATACACAATTACTAGCCCGATTATCCTGAAGTACTCCTTTAAGTATGGAACACAAAAGCAGAGGATTCTCATTTTATTAGATCATTTGAGTGTATTTAAACAGTTTGGAATTGCATGCTGTTGGCTTGGTTTGGAGTTCTTTTGAGTGGCATTCGATAGTCTTGATTGAAGCTGTACGACGTGAAATGGCAAAAGTTATCTCG]

[+] EMBL BM635687             [CCGCCCACGCGTCCGAAAAAAGAAAAACAATAAAAATAGAATCAATGCAAGTTAGTAAAACAATTACAGAGAGAACAGCAAAACCACAGATTAAGGAGCAGAGGAAGAAAAAAATAGAGCATTACAGTATGGAATTTGGAGTCAAATAATACATCAAGAGTATAGAAATATAATCGTTTCATTGAATACTGGTCGTACATTGCAGGCAGCGTAAAAATAAATAGAAAACGAAGCATGATATATGAAGCATGTTCTGCTCTGAACGAAGGAGATCACGAGCAAAACTCTGTAACCCTGCTATACATATGTGTGCTACGGTGAGTGTGTCGTACAGTCATGCGTATGTAATTGAGAATGCAAATAGGAACAAAAAGAAAGTCGTCTGCTACACATGGAAATATTCCAAATTATGATCGTCACATGAAATGGCATACAGATCCAACAGAGATAGCTTAGCCCGATACACAATTACTAGCCCGATTATCCTGAAGTACTCCTTTAAGTATGGAACACAAAAGCAGAGGATTCTCATTTTATTAGATCATTTGAGTGTATTTAAACAGTTTGGAATTGCATGCTGTTGGCTTGGTTTGGAGTTCTTTTGAGTGGCATTCGATAGTCTTGATTGAAGCTGTACGACGTGAAATGGCAAAAGTTATCTCG]




>consensus_8836#2
CCGCCCACGCGTCCGAAAAAAGAAAAACAATAAAAATAGAATCAATGCAAGTTAGTAAAA
CAATTACAGAGAGAACAGCAAAACCACAGATTAAGGAGCAGAGGAAGAAAAAAATAGAGC
ATTACAGTATGGAATTTGGAGTCAAATAATACATCAAGAGTATAGAAATATAATCGTTTC
ATTGAATACTGGTCGTACATTGCAGGCAGCGTAAAAATAAATAGAAAACGAAGCATGATA
TATGAAGCATGTTCTGCTCTGAACGAAGGAGATCACGAGCAAAACTCTGTAACCCTGCTA
TACATATGTGTGCTACGGTGAGTGTGTCGTACAGTCATGCGTATGTAATTGAGAATGCAA
ATAGGAACAAAAAGAAAGTCGTCTGCTACACATGGAAATATTCCAAATTATGATCGTCAC
ATGAAATGGCATACAGATCCAACAGAGATAGCTTAGCCCGATACACAATTACTAGCCCGA
TTATCCTGAAGTACTCCTTTAAGTATGGAACACAAAAGCAGAGGATTCTCATTTTATTAG
ATCATTTGAGTGTATTTAAACAGTTTGGAATTGCATGCTGTTGGCTTGGTTTGGAGTTCT
TTTGAGTGGCATTCGATAGTCTTGATTGAAGCTGTACGACGTGAAATGGCAAAAGTTATC
TCG

consensusID : consensus_8836#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 448
fasta sequence

                              [CGCAGCAGCCGCCCATCTTATGCACTCGACTTAGTCGTCCTGGACTACAACTATGCAACCTTGCTGCCGAGAATCATCTAAGCTCGGTGCACAGGGACACACAGCTGGATGAACCGATCGGCAATGCCCGTCAGCCGCAGTAGTGGCAGTCGTCACACATACACCTTGCGGAAAAGATTAAATTGTAACTCTCTTGTTTCTCTCTCTACGCTAATGGTGGGAATGCGCGCCGAATTGCTTACATCTGGATAGATACAACGGGCAGCGGAAAGCTAATGCTGCCTCAACACGTTATTCTTCTCCCTTCTGCGCATTGCATAGCGCATTATACATTATTCTTAAATGGTTTTCGGCAATAATCAGCTACAAGTTTGTATTTATTATATTTATTATTTTTTTCCTTGCTTATCATATCATGTTGTTATTATCGCAAACGAAATTCACATTT]

[+] EMBL AGA280749            [CGCAGCAGCCGCCCATCTTATGCACTCGACTTAGTCGTCCTGGACTACAACTATGCAACCTTGCTGCCGAGAATCATCTAAGCTCGGTGCACAGGGACACACAGCTGGATGAACCGATCGGCAATGCCCGTCAGCCGCAGTAGTGGCAGTCGTCACACATACACCTTGCGGAAAAGATTAAATTGTAACTCTCTTGTTTCTCTCTCTACGCTAATGGTGGGAATGCGCGCCGAATTGCTTACATCTGGATAGATACAACGGGCAGCGGAAAGCTAATGCTGCCTCAACACGTTATTCTTCTCCCTTCTGCGCATTGCATAGCGCATTATACATTATTCTTAAATGGTTTTCGGCAATAATCAGCTACAAGTTTGTATTTATTATATTTATTATTTTTTTCCTTGCTTATCATATCATGTTGTTATTATCGCAAACGAAATTCACATTT]
[+] EMBL AGA283504            [CGCAGCAGCCGCCCATCTTATGCACTCGACTTAGTCGTCCTGGACTACAACTATGCAACCTTGCTGCCGAGAATCATCTAAGCTCGGTGCACAGGGACACACAGCTGGATGAACCGATCGGCAATGCCCGTCAGCCGCAGTAGTGGCAGTCGTCACACATACACCTTGCGGAAAAGATTAAATTGTAACTCTCTTGTTTCTCTCTCTACGCTAATGGTGGGAGTGCGCGCCGAATTGCTTACATCTGGATAGATACAACGGGCAGCGGA   CTAATGCTGCCTCAACACGTTATTCTTCTCCCTTCTGCGCATTGCATAGCGCATTATACATTATTCTTAAATGGTTTTCGGCAATAATCAGCTACAAGTTTGTATTTATTATATTTATTATTTTTTTCCTTGCTTATCATATCATGGTGTTATTATCGCAGACGAAATTCAC    ]




>consensus_8836#3
CGCAGCAGCCGCCCATCTTATGCACTCGACTTAGTCGTCCTGGACTACAACTATGCAACC
TTGCTGCCGAGAATCATCTAAGCTCGGTGCACAGGGACACACAGCTGGATGAACCGATCG
GCAATGCCCGTCAGCCGCAGTAGTGGCAGTCGTCACACATACACCTTGCGGAAAAGATTA
AATTGTAACTCTCTTGTTTCTCTCTCTACGCTAATGGTGGGAATGCGCGCCGAATTGCTT
ACATCTGGATAGATACAACGGGCAGCGGAAAGCTAATGCTGCCTCAACACGTTATTCTTC
TCCCTTCTGCGCATTGCATAGCGCATTATACATTATTCTTAAATGGTTTTCGGCAATAAT
CAGCTACAAGTTTGTATTTATTATATTTATTATTTTTTTCCTTGCTTATCATATCATGTT
GTTATTATCGCAAACGAAATTCACATTT

consensusID : consensus_8836#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 306
fasta sequence

                              [CCGCCCACGCGTCCGATTAAAAAAAGCATTAATATAATGTAAGCACCATTCTTCTCTCGATCTTTAATCTTAACGTTTAAAAGAGTAAGGAGAAGGGATTACAAGCACCAAACAAATGCGCAGGATCATTTGGAAAAAGTCTAAATACGGAACAGATAAAACCTATACTAAACTATTGATCATTGTCACTTGCGTCATACAATTGTGAAGAATGCTTTTTTTTTATACAAAGACAAGATACGATCAGTGGCAGGCAGCGTAAAAATAAATAGAAAACGAAGCATGGGATATGAAGCATGTTCTGCT]

[+] EMBL BM595307             [CCGCCCACGCGTCCGATTAAAAAAAGCATTAATATAATGTAAGCACCATTCTTCTCTCGATCTTTAATCTTAACGTTTAAAAGAGTAAGGAGAAGGGATTACAAGCACCAAACAAATGCGCAGGATCATTTGGAAAAAGTCTAAATACGGAACAGATAAAACCTATACTAAACTATTGATCATTGTCACTTGCGTCATACAATTGTGAAGAATGCTTTTTTTTTATACAAAGACAAGATACGATCAGTGGCAGGCAGCGTAAAAATAAATAGAAAACGAAGCATGGGATATGAAGCATGTTCTGCT]




>consensus_8836#4
CCGCCCACGCGTCCGATTAAAAAAAGCATTAATATAATGTAAGCACCATTCTTCTCTCGA
TCTTTAATCTTAACGTTTAAAAGAGTAAGGAGAAGGGATTACAAGCACCAAACAAATGCG
CAGGATCATTTGGAAAAAGTCTAAATACGGAACAGATAAAACCTATACTAAACTATTGAT
CATTGTCACTTGCGTCATACAATTGTGAAGAATGCTTTTTTTTTATACAAAGACAAGATA
CGATCAGTGGCAGGCAGCGTAAAAATAAATAGAAAACGAAGCATGGGATATGAAGCATGT
TCTGCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8836#1      ------------------------------------------------------------
consensus_8836#0      CGACCCACGCGTCCGCCCACGCGTCCGGCAATGCCCGTCAGCCGCAGTAGTGGCAGTCGT 60
consensus_8836#2      ------------------------------------------------------------
consensus_8836#3      ------------------------------------------------------------
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      ------------------------------------------------------------
consensus_8836#0      CACACATACACCTTGCGGAAAAGATTAAATTGTAACTCTCTTGTTTCTCTCTCTACGCTA 120
consensus_8836#2      ------------------------------------------------------------
consensus_8836#3      ------------------------------------------------------------
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      ------------------------------------------------------------
consensus_8836#0      ATGGTGGGAGTGCGCGCCGAATTGCTTACATCTGGATAGATACAACGGGCAGCAGACTAA 180
consensus_8836#2      ------------------------------------------------------------
consensus_8836#3      ------------------------------------------------------------
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      ------------------------------------------------------------
consensus_8836#0      TGCTGCCTCAACACGTTATTCTTCTCCCTTCTGCGCATTGCATAGCGCATTATACATTAT 240
consensus_8836#2      ------------------------------------------------------------
consensus_8836#3      ------------------------------------------------------------
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      ------------------------------------------------------------
consensus_8836#0      TCTTAAATGGTTTTCGGCAATAATCACCTACAAGTTTGTATTTATTATATTTATTATTTT 300
consensus_8836#2      ------------------------------------------------------------
consensus_8836#3      ------------------------------------------------------------
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      ----------------------------------------ATTTTCCACCAGTAGANCTT 20
consensus_8836#0      TCCTTGCTTACCATATCATGTTGTTATTATCGCAAACGAAATTCACATTTACAGTGCAGT 360
consensus_8836#2      ------------------------------------------------------------
consensus_8836#3      ------------------------------------------------------------
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      CCCAGGTTNCTGACAAATCGGTTTCCNGCCTAAAGAAATANCACATTATAGAGTTGGGTT 80
consensus_8836#0      AAATGGTGTATATCCAACGGTTTACTCAGTAACAAAAATAGTGAAATCTGTTAATCGATC 420
consensus_8836#2      ------------------------------------------------------------
consensus_8836#3      ------------------------------------------------------------
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      GGAAATTGGACGGTNGAAGAGAGGATTAATTCATGCATATTGTAGAAGAAACTGCGTACA 140
consensus_8836#0      AATCGGCTTTCCGTTAAAGAAACGCAAATTATGAGTTGGGTTGGAAATTGGACGGTTAAG 480
consensus_8836#2      ------------------------------------------------------------
consensus_8836#3      ------------------------------------------------------------
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      TAGCAAATTGCGAAACAAATAGGAATGGTTTATTGGTATGGACAGAAATCGAANTTAAAC 200
consensus_8836#0      AGAGGATTAATTCATGCATTTGTAGAAGAAACTGCGTACATGCAAATAGCGAAACAAATA 540
consensus_8836#2      ------------------------------------------------------------
consensus_8836#3      ------------------------------------------------------------
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      AAGCTGCAACCACATTTAGCCGAAGTGGCAACTGATAGCGATCATCTGTACCGACACGAA 260
consensus_8836#0      GGAATGGTTTTGGTTGGAAGAAATCGAAATTAAACAAGCTGCAACCAATTTAGCGAAGGG 600
consensus_8836#2      ------------------------------------------------------------
consensus_8836#3      ------------------------------------------------------------
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      AGAAAACAACTAGCCANAGAGCATTTCGCAACCTCACAGGTCCCNCGTTATGCNTATCGT 320
consensus_8836#0      AACGATAGCGATCATCGTACCGACACGAAGAAACAACTAGCCAAGAGCATTTGAAACTCA 660
consensus_8836#2      ------------------------------------------------------------
consensus_8836#3      ------------------------------------------------------------
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      ACCCCCCCTTGGCGCTACTCCCTAAANGGAACGTTCCAACTATTGGCACAGTGGTTTATC 380
consensus_8836#0      AAGTCACAGTTTTGCATATGTTTTCGCTGCTATCTAAGACTCATTTGCAATGTTTTTTTT 720
consensus_8836#2      ------------------------------------------------------------
consensus_8836#3      ------------------------------------------------------------
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      ACANNACNGACACACACCCCCCACGNTCGCAACGGNACATCCCNCGGTTCAACCTCCANA 440
consensus_8836#0      CGTTGTTGTATCATGTAAATCAATATAAAGGATAGATGATTGTTCTTGCAATAGATAGTT 780
consensus_8836#2      ------------------------------------------------------------
consensus_8836#3      ------------------------------------------------------------
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      TACTANCAAAGGATAACACATCGACAAAGGTAANCNCNGGCACACAAGAATAAGTACAAC 500
consensus_8836#0      CACAACCGCTGACCATTCGGATACACACATGGCTCGTTATTTTTCGGTGAAGGTTTGTGA 840
consensus_8836#2      ------------------------------------------------------------
consensus_8836#3      ------------------------------------------------------------
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      AAAAACCGCGATNNAAACCAAAACNCGCGCCTACACCACCAACACATNNGTAGACNNCCA 560
consensus_8836#0      TTGAAAGTTCCTTAAGCGAAAAAAAAACAACAAAAAATCCTGAAAAAAAGAAAAACA--A 898
consensus_8836#2      --------------------------CCGCCCACGCGTCC--GAAAAAAGAAAAACA--A 30
consensus_8836#3      ------------------------------------------------------------
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      CAAAAAAAAACNCATATCCACCCTCTACACAACCAACATTNCTTCCCTCGACCATCCNAC 620
consensus_8836#0      TAAAAATAGAATCAATGCAAGTTAGTAAAACAATTACAGAGAGAATAGCAAAAC-CACAG 957
consensus_8836#2      TAAAAATAGAATCAATGCAAGTTAGTAAAACAATTACAGAGAGAACAGCAAAAC-CACAG 89
consensus_8836#3      -------------------------------------------CGCAGCAGCCG-CCCAT 16
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      CACAACCAACATAATCCCCACTNTTAAAAACACNACTCAACACANCAACNANCATCACCA 680
consensus_8836#0      ATTAAGGAGCAGAGGAAGAAAAAAATAGAGCATTACAGTATGGAAT--TTGGAGTCAAGT 1015
consensus_8836#2      ATTAAGGAGCAGAGGAAGAAAAAAATAGAGCATTACAGTATGGAAT--TTGGAGTCAAAT 147
consensus_8836#3      CTTATGCACTCGACTTAGTCGTCC-TGGACTACAAC--TATGCAAC--CTTGCTGCCGAG 71
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      CNCCCACCNAAAACTACNCAATNCCCCACTTANAATATANCAAATCCAAACCCNCCACAT 740
consensus_8836#0      AATACATCAAGA-GTATAGAAATATAATCGTTTCATTGAAT--ACT--GGTCGTACATTG 1070
consensus_8836#2      AATACATCAAGA-GTATAGAAATATAATCGTTTCATTGAAT--ACT--GGTCGTACATTG 202
consensus_8836#3      AAT-CATCTAAG-CTCGGTGCACAGGGACACACAGCTGGATGAACC--GATCGGCAATGC 127
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      CTACACNCANAATTATCCACACCCCATACAACACACNCCCATCCAANNTNCCAACCCCAC 800
consensus_8836#0      CAGGCAGCGTAAAAATAAATAGAAAACGAAGCAT-GATATATGAAGCATGTTCTGCTCTG 1129
consensus_8836#2      CAGGCAGCGTAAAAATAAATAGAAAACGAAGCAT-GATATATGAAGCATGTTCTGCTCTG 261
consensus_8836#3      CCGTCAGCCGCAGTAGTGGCAGT--------CGT-CACACATACACCTTG---------- 168
consensus_8836#4      ------------------------------CCGCCCACGCGTCCGATTAAAAAAAGCATT 30
                                                     *         *                  

consensus_8836#1      ACCACCATCAAACACAACC-TACCCNCCCCNCCCCCNCACCCCCNCCNACACTCNCTCNA 859
consensus_8836#0      AACGAAGGAGATCACGAGCAAAACTCTGTAACCCTGCTATACATATGTGTGCTACGGTGA 1189
consensus_8836#2      AACGAAGGAGATCACGAGCAAAACTCTGTAACCCTGCTATACATATGTGTGCTACGGTGA 321
consensus_8836#3      --CGGAAAAGATTA-AATTGTAACTCTCTTGTTTCTCTCTCTACGC-----TAATGGTGG 220
consensus_8836#4      AATATAATGTA--AGCACCATTCTTCTCTCGATCTTTAATCTTAACGT---TTAAAAGAG 85
                                *  *  *                                           

consensus_8836#1      NAACNAANAANNACACCACACACCACCNAAAACAATAAAAACAACANAAAAAACAATACN 919
consensus_8836#0      GTGTGTCGTACAGTCATGCGTAT-GTAATTGAGAATGCAAATAGGAACAAAAAGGAAGTC 1248
consensus_8836#2      GTGTGTCGTACAGTCATGCGTAT-GTAATTGAGAATGCAAATAGGAACAAAAAGAAAGTC 380
consensus_8836#3      GAATG-CGCGCCGAATTGCTTAC-ATCTGGATAGATACAACGGGCAGCGGAAAGCTAAT- 277
consensus_8836#4      TAAGGAGAAGGGATTACAAGCACCAAACAAATGCGCAGGATCATTTGGAAAAAGTCTA-A 144
                                           *                 *          ***       

consensus_8836#1      ATATCNACAATANACNATCCCCACNATCCCCNCACANCCCANATCAACACATACANACAA 979
consensus_8836#0      GTCTGCTACACATGGAAATATTCCAAATTATGATCGTCACATG---AAATGG-CATACAG 1304
consensus_8836#2      GTCTGCTACACATGGAAATATTCCAAATTATGATCGTCACATG---AAATGG-CATACAG 436
consensus_8836#3      GCTGCCTCAACACGTTATTCTTCTCCCTTCTGCGCATTGCATA---GCGCAT-TATAC-- 331
consensus_8836#4      ATACGGAACAGATAAAACCTATACTAAA-CTATTGATCATTGTCACTTGCGT-CATACAA 202
                               * *    *                                     * **  

consensus_8836#1      NTCAAANNAACACCCAATAATNAACATTAATNNTAATCAACAANTATANATN-ACCAAAN 1038
consensus_8836#0      ATCCAACAGA-----GATAGCTTAGCCCGATACACAATTACTAGCCCGATTATCCTGAAG 1359
consensus_8836#2      ATCCAACAGA-----GATAGCTTAGCCCGATACACAATTACTAGCCCGATTATCCTGAAG 491
consensus_8836#3      ATTATTCTTA-----AATGGTTTTCGGCAATAATCAGCTACAAGTTTGTATTTATTATAT 386
consensus_8836#4      TTGTGAAGAA-------TGCTTTTTTTTTATACAAA--GACAAGATACGATCAGTGGCAG 253
                       *       *       *           **    *   ** *       *       * 

consensus_8836#1      CCNANACTAAACTACCAACAANCAACATCNACTANCCATCNCTTNCNTCCCCACACACAC 1098
consensus_8836#0      T-ACTCCTTTAAGTATGGAACACACAAGCAGAGGATTCTCA-TTTTAATAGATCATTTCA 1417
consensus_8836#2      T-ACTCCTTTAAGTATGGAACACAAAAGCAGAGGATTCTCA-TTTTATTAGATCATTTGA 549
consensus_8836#3      TTATTATTTTTTTCCTTGCTTATCATATCATGTTGTTATTA-TCGCAAACGAA-ATTCAC 444
consensus_8836#4      GCAGCGTAAAAATAAATAGAAAACGAAGCATGGGAT-ATGAAGCATGTTCTGCT------ 306
                                                * *         *                     

consensus_8836#1      CTACACTAAGCCCCACNCAACACAACANACTCTATAACAAAAACCNNAATANTACATCAA 1158
consensus_8836#0      GTGTATTTAAACA-GTTTGGAATTCCATGCTGT-TGGCTTGGTTTGGAGTTCTTTTGAGT 1475
consensus_8836#2      GTGTATTTAAACA-GTTTGGAATTGCATGCTGT-TGGCTTGGTTTGGAGTTCTTTTGAGT 607
consensus_8836#3      ATTT-------------------------------------------------------- 448
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      TCAANCTANTAACAACCANTAAACATATACATAACACAAAACAACAAAAANACAACCANC 1218
consensus_8836#0      GGCATTCGATAGTCTTCATTGAAGCTGTACG--ACGTGAAATGGCAAAAGATATCTCGAT 1533
consensus_8836#2      GGCATTCGATAGTCTTGATTGAAGCTGTACG--ACGTGAAATGGCAAAAGTTATCTCG-- 663
consensus_8836#3      ------------------------------------------------------------
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      NAACACNTTTCTATAACCAAAAACAAAAATAAAACCCAANAAACTCAC------------ 1266
consensus_8836#0      TTACCCTAAGCAAACTATAGGTAATAAAACTTGCACTCACTCACACACATACACAAACCA 1593
consensus_8836#2      ------------------------------------------------------------
consensus_8836#3      ------------------------------------------------------------
consensus_8836#4      ------------------------------------------------------------
                                                                                  

consensus_8836#1      --
consensus_8836#0      TA 1595
consensus_8836#2      --
consensus_8836#3      --
consensus_8836#4      --