These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8845#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1287 fasta sequence [TATTGTTTATACATATAACATACGGCAATTATTGACTTAGGAATAACGTTCGTTTATAGAACTACGGTATGCATTAACAGTACTATTTACGCCTTAGTGCTTTTCAGTGATGTTTGGTCCAGCCCGGCGGTGGTTTCGGAATTGGCACCCATTCAGTTACCTGCACCGGTCCCCAGACGCGCTTTCAGACACCGACGTACACCTTCTTCTCCTGCCAGCTCTTCACCCAGCGTGGCTTCCAGATGAACTTCTTCTTCCAGAATCCGGTCGGCTGCGGCGTACAGTTACGACGACATGATCATGGTGCACATGATGCACATCATGGTGGTGCACATCGTGATGCAGATCGTGGTGAAGGTCGTGATGCAGATCATGGTGCACGTCGTGATGTAAGAGCGAATTGTCAGCATGAGCATGATGGTGGGCGAGTTCTTTGCTGGCAGCATAGCTTTCTAAATCACTAGCCAGGGAGTGCGGCAGAATCGATAATATGAGCGTCAATGATGCTGCAAGTAATACTGGCTATTATCGATACCATTGAACACAAGTTTGTTTTACGCATCGCAGCATATTTACGCATAATCATAAAGTGCCTTTCGACGTTCGGTACATCCGTCACTTCCGCTGCCAACGCGGAGAACAATGGTAAGGGTTTTTTACAGGGACAGGAAGCCCTGATATGAATCCGATGACGATGAAAATAAACGTTGCACTTATTTCTGCCACATTTCGCACCATTTCGCCTCTTCGCGTGCATATTTGGAAAAGAAATATTGCACCATTTTCTTGGTTGCTACCTTTCGCGACGCTCGTTGGCTTTGGTTTTCATTCCACATTGGCTGTAGGTTTGTGTTGTTTTTTTTTCATGATTTCCTATTGCTGAGTTCCAAAGGGACCGGGATCAATATGGGCGATATCGCTATAGCATGCAATGAAGGGAGCTTTCCGATAAAGGTCATTTTCATCGTTTTCAATATTATCCATAAACGATCTGCGAATGAGTGTATCAGCCATCTGTAAAGCTCCATCACACACCGTTGAAATACTGGCACAGGAAAAGAGGAACCATTTTTGATCACTTGTAATCATCGTGTGTGTGTCCCTGTGTTTCTAGCTTTACTCCAATACAGATTTGCTAATTAGAGACCGTTTTTCAGCGGCACTGTCCATTCTTGTAGCTTTAAACATTATAAAACTCTTTTTATCACAGCAATGCAACAAGATTTGGTATGAATCAATGAACCGGCACCGCACAATTGTAGGCCATTTTCTACGATTTCGTATTAC] [+] EMBL CNS08L83 [TATTGTTTATACATATAACATACGGCAATTATTGACTTAGGAATAACGTTCGTTTATAGAACTACGGTATGCATTAACAGTACTATTTACGCCTTAGTGCTTTTCAGTGATGTTTGGTCCAGCCCGGCGGTGGTTTCGGAATTGGCACCCATTCAGTTACCTGCACCGGTCCCCAGACGCGCTTTCAGACACCGACGTACACCTTCTTCTCCTGCCAGCTCTTCACCCAGCGTGGCTTCCAGATGAACTTCTTCTTCCAGAATCCGGTCGGCTGCGGCGTACAGTTACGACGACATGATCATGGTGCACATGATGCACATCATGGTGGTGCACATCGTGATGCAGATCGTGGTGAAGGTCGTGATGCAGATCATGGTGCACGTCGTGATGTAAGAGCGAATTGTCAGCATGAGCATGATGGTGGGCGAGTTCTTTGCTGGCAGCATAGCTTTCTAAATCACTAGCCAGGGAGTGCGGCAGAATCGATAATATGAGCGTCAATGATGCTGCAAGTAATACTGGCTATTATCGATACCATTGAACACAAGTTTGTTTTACGCATCGCAGCATATTTACGCATAATCATAAAGTGCCTTTCGACGTTCGGTACATCCGTCACTTCCGCTGCCAACGCGGAGAACAATGGTAAGGGTTTTTTACAGGGACAGGAAGCCCTGATATGAATCCGATGACGATGAAAATAAACGTTGCACTTATTTCTGCCACATTTCGCACCATTTCGCCTCTTCGCGTGCATATTTGGAAAAGAAATATTGCACCATTTTCTTGGTTGCTACCTTTCGCGACGCTCGTTGGCTTTGGTTTTCATTCCACATTGGCTGTAGGTTTGTGTTGTTTTTTTTTCATGATTTCCTATTGCTGAGTTCCAAAGGGACCGGGATCAATATGGGCGATATCGCTATAGCATGCAATGAAGGGAGCTTTCC ] [-] EMBL CNS08L82 [ GCGAATGGTCAGCATGAGCATGATGGTGGGCGAGGTCTTCGCTGGCAGCATAGCTTTCTAAATCACTAGCCAGGGAGTGCGGCAGAATCGATAATATGAGCGTCAATGATGCTGCAAGTAATACTGGCTATTATCGATACCATTGAACACAAGTTTGTTTTACGCATCGCAGCATATTTACGCATAATCATAAAGTGCCTTTCGACGTTCGGTACATCCGTCACTTCCGCTGCCAACAAAAAGAACAATGGTAAGGGATGAACACAGGGACAGGAAGCCCTGATATGAATCCGATGACGATGAAAATAAACGTTGCACTTATTTCTGCCACATTTCGCACCATTTCGCCTCTGCGCGTGCATATTTGGAAAAGAAATATTGCACCATTTTCTTGGTTGCTACCTTTCGCGACGCTCGTTGGCTTTGGTTTTCATTCCACATTGGCTGTAGGTTTGTGTTGTTTTTTTTTCATGATTGCCTATTGCTGAGTTCCAAAGGGACCGGGATCAATATGGGCGATATCGCTATAGCATGCAATGAAGGAAGCTTTCCGATAAAGGTCATTTTCATCGTTTTCAATATTATCCATAAACGATCTGCGAATGAGTGTATCAGCCATCTGTAAAGCTCCATCACACACCGTTGAAATACTGGCACAGGAAAAGAGGAACCATTTTTGATCACTTGTAATCATCGTGTGTGTGTCCCTGTGTTTCTAGCTTTACTCCAATACAGATTTGCTAATTAGAGACCGTTTTTCAGCGGCACTGTCCATTCTTGTAGCTTTAAACATTATAAAACTCTTTTTATCACAGCAATGCAACAAGATTTGGTATGAATCAATGAACCGGCACCGCACAATTGTAGGCCATTTTCTACGATTTCGTATTAC] consensusID : consensus_8845#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1215 fasta sequence [CACACCAGCACTTTGCTCGACTGAGCAGTTTTTCAAACAAGTTAACCACCGTTTTCGAGATTTTGTGTAGGGAAATCGAGAAGAAAAAATAAACAGAAACGGCTTATGGAAATATGTGTCTCTTCCGGAAAGGGCATCCATGGCCTCGATACAGTTTTCGACGAATTAATTTGTAGTGAATTTATTATCTCGATCCCAAGGGAGGAAAGCATATGCATGTGTGTACGACTTTACGGAATGTAGGGTGAATGTGAGCTTGGTGCGTGATAAATAAGCGAGAATTTATACGATTTTTGTAACGACGGTGAGTGAATCGAGAGGAACAAAGGGCAGGATGAGCAATATGCAACCAGAAGAGTACGAGAATACGGGCTGGCTGTCGTACTTTAGCCGGCACAAGACGACCTACACTGCGTCCGATATTCACAAGATCAGCAACGAGCTGAACAATGTGCGCAAGAACCTGACCGCCACCCAGTACGCGTACGGCGAGCTGAGCAGTGAGCTGAAGGCACTCAAGAGTCTCCAGGAACAGCAGCGCTTGGTGGACGAGTACGAGCAAAGGGCGGCAGGCAGCAAAGGCTCGAAATCGACCGACAAGCGGCTGAAGGAACAGGCCGACGAAATCAAAAGTCTCAAGAGTGATCTTGCGAGCTGCCGGAATGAGCTGTCCAAGCAGATCGCCGCCCTGAAGGTGTCGGTTGGCGAGCAGAGCAAGAAAAAGGGTGTGTTTGGGAGGTGGTGGCAAGCCTTCGCACGGCAACCCACCGCCAGCCGGCAGTAACGCCATGACCTTGAGTCTGGAAAGTCGCATCATTGCCGCGGAGGTACAGATCGATCAGCT-GACAACCGGGCACACTGGCCGGTTAAGTGCTCTGGAGCAGAA-AG-TAGGTCAGCTAGAGCAGACGGGCGGCAGTTCGACGGTAGAT-TATGAGGTACGGCTGAATGCTCTCGAAGCGAGATTTTACGCTGCAAGCTGCAGGATCTTGACCGATCTTGTGGTGGAGCTGCAGACGCAAGCTAGCTAANAGTGAAGCCAAACAGGTGGAAATGGTGCAACGGTATGTCGACGTGCCCAAACCACACTGTATGANACAGCTGGAGCAGCGGTACGATGAGCAGTGTGGCAAACTGCGAGAATTGCAAGTTNCGGTCAGGCATCTTGGCCAGACATGACGACGTCNACTCCACGTAGTGTCTGAGGGAACCTGGGCA] [+] EMBL CNS09AU7 [CACACCAGCACTTTGCTCGACTGAGCAGTTTTTCAAACAAGTTAACCACCGTTTTCGAGATTTTGTGTAGGGAAATCGAGAAGAAAAAATAAACAGAAACGGCTTATGGAAATATGTGTCTCTTCCGGAAAGGGCATCCATGGCCTCGATACAGTTTTCGACGAATTAATTTGTAGTGAATTTATTATCTCGATCCCAAGGGAGGAAAGCATATGCATGTGTGTACGACTTTACGGAATGTAGGGTGAATGTGAGCTTGGTGCGTGATAAATAAGCGAGAATTTATACGATTTTTGTAACGACGGTGAGTGAATCGAGAGGAACAAAGGGCAGGATGAGCAATATGCAACCAGAAGAGTACGAGAATACGGGCTGGCTGTCGTACTTTAGCCGGCACAAGACGACCTACACTGCGTCCGATATTCACAAGATCAGCAACGAGCTGAACAATGTGCGCAAGAACCTGACCGCCACCCAGTACGCGTACGGCGAGCTGAGCAGTGAGCTGAAGGCACTCAAGAGTCTCCAGGAACAGCAGCGCTTGGTGGACGAGTACGAGCAAAGGGCGGCAGGCAGCAAAGGCTCGAAATCGACCGACAAGCGGCTGAAGGAACAGGCCGACGAAATCAAAAGTCTCAAGAGTGATCTTGCGAGCTGCCGGAATGAGCTGTCCAAGCAGATCGCCGCCCTGAAGGTGTCGGTTGGCGAGCAGAGCAAGAAAAAGGGTGTGTTTGGGAGGTGGTGGCAAGCCTTCGCACGGCAACCCACCGCCAGCCGGCAGTAACGCCATGACCTTGAGTCTGGAAAGTCGCATCATTGCCGCGGAGGTACAGATCGATCAGCT GACAACCGGGCACACTGGCCGGTTAAGTGCTCTGGAGCAGAA AG TAGGTCAGCTAGAGCAGACGGGCGGCAGTTCGACGGTAGAT TATGAGGTACGGCTG ] [+] EMBL AL933210 [ ccgaggttaCCTTCGCACGGCA CCACCGCCAGCCGGCAGTAACGCCATGACCTTGAGTCTGGAAAGTCGCATCATTGCCGCGGAGGTACAGATCGATCAGCTAGACAACCGGGCACACTGACCGGTTAAGTGCTCTGGAGCAGAACAGCTAGGTCAGCTAGAGCAGACGGGCGGCAGTTCGACGGTAGATCTATGAGGTACGGCTGAATGCTCTCGAAGCGAGATTTTACGCTGCAAGCTGCAGGATCTTGACCGATCTTGTGGTGGAGCTGCAGACGCAAGCTAGCTAANAGTGAAGCCAAACAGGTGGAAATGGTGCAACGGTATGTCGACGTGCCCAAACCACACTGTATGANACAGCTGGAGCAGCGGTACGATGAGCAGTGTGGCAAACTGCGAGAATTGCAAGTTNCGGTCAGGCATCTTGGCCAGACATGACGACGTCNACTCCACGTAGTGTCTGAGGGAACCTGGGCA] consensusID : consensus_8845#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1167 fasta sequence [TAGTTTCACGATGGAATCGAATTTTTTTTTCTTGTTTTTAATATCAAGCTTTTTCACAAATTATTGTACTTTACACAACAGTGAAATGGTGAATTTATTGTTTTACATCTAACCATACGGCAATGATTGACTTAGGAATAACGTTCGTTTATAGAACTACGGTATGCATTAACAGTACTATTTACGCCTTAGTGCTTTTCAGTGATGTTTGGTCCAGCCCGGCGGTGGTTTCGGAATTGGCACCCATTCAGTTACCTGCACCGGTCCCCAGACGCGCTTCCAGACACCGACGTACACCTTCTTCTCCTGCCAGCTCTTCACCCAGCGTGGCTTCCAGATGAACTTCTTCTTCCAGAATCCGGTCGGCTGCGGCGTAGCAGTCAC-GACGACATGATCATGGTGCACATGATGCACATCATGGTGGTGCACATCGTGATGCAGATCGTGGTGAAGGTCGTGATGCAGATCATGGTGCACGTCGTGATGTAAGAGCGAATGGTCAGCTTGTGCTGCCAGGCTGTGCAGCAGCGCCTCCGGATGATGGTGCACTAACTCATGGTCAGCATGAGCATGATGGTGGGCG-AGTGCTTCGCTGGCAGCATAGCTTTCTAAATCACTAGCCAGGGAGTGCGGCAGAATC-GATAATATGAGCGTCAATGATGCTGCAAGTAATACTGGCTCTCGTTGCCCGGTTCCCTCAGACAAACGTGGAGTCGACGTCGTCATGCTGGCCAAGATGGCTGAGCCGAACTTGCAATTCTCGCAGTTTGCCACACTGCTCATCGTACCGCTGCTCCAGCTGTTCATACAGTGTGGTTTGGGCCGTCGACAACCGTTGCACCATTTCCACCTGTTTGGCTTCACTCTTAGCTAGCTTGCGCTGCAGCTCCACCACAAGATCGGTCAGATCCTGCAGCTTGCGCGTAAAAACTCGCTCGAGAGCATTCAGCCGTACCTCATAATCTACCGACGAACTGCCGCCCGTCTGCTCTAGCTGACCTACTTTCTGCTCCAGAGCACTTAACCGGTCAGTGTGCCCGGTTGTCAGCTGATCTTGTGAATATCGGACGCAGTGTAGGTCGTCTTGTGCCGGCTAAAGTACGACAGCCAGCCCGTATTCTCGTACTCTTCTGGTTGCATATTGCTCATCCTGCCGCGATTCACTCA] [-] EMBL BX616779 [TAGTTTCACGATGGAATCGAATTTTTTTTTCTTGTTTTTAATATCAAGCTTTTTCACAAATTATTGTACTTTACACAACAGTGAAATGGTGAATTTATTGTTTTACATCTAACCATACGGCAATGATTGACTTAGGAATAACGTTCGTTTATAGAACTACGGTATGCATTAACAGTACTATTTACGCCTTAGTGCTTTTCAGTGATGTTTGGTCCAGCCCGGCGGTGGTTTCGGAATTGGCACCCATTCAGTTACCTGCACCGGTCCCCAGACGCGCTTCCAGACACCGACGTACACCTTCTTCTCCTGCCAGCTCTTCACCCAGCGTGGCTTCCAGATGAACTTCTTCTTCCAGAATCCGGTCGGCTGCGGCGTAGCAGTCAC GACGACATGATCATGGTGCACATGATGCACATCATGGTGGTGCACATCGTGATGCAGATCGTGGTGAAGGTCGTGATGCAGATCATGGTGCACGTCGTGATGTAAGAGCGAATGGTCAGCTTGTGCTGCCAGGCTGTGCAGCAGCGCCTCCGGATGATGGTGCACTAACTCATGGTCAGCATGAGCATGATGGTGGGCG AGTGCTTCGCTGGCAGCATAGCTTTCTAAATCACTAGCCAGGGAGTGC ] [-] EMBL BX618395 [TAGTTTCACGATGGAATCGAATTTTTTTTTCTTGTTTTTAATATCAAGCTTTTTCACAAATTATTGTACTTTACACAACAGTGAAATGGTGAATTTATTGTTTTACATCTAACCATACGGCAATGATTGACTTAGGAATAACGTTCGTTTATAGAACTACGGTATGCATTAACAGTACTATTTACGCCTTAGTGCTTTTCAGTGATGTTTGGTCCAGCCCGGCGGTGGTTTCGGAATTGGCACCCATTCAGTTACCTGCACCGGTCCCCAGACGCGCTTCCAGACACCGACGTACACCTTCTTCTCCTGCCAGCTCTTCACCCAGCGTGGCTTCCAGATGAACTTCTTCTTCCAGAATCCGGTCGGCTGCGGCGTAGCAGTCAC GACGACATGATCATGGTGCACATGATGCACATCATGGTGGTGCACATCGTGATGCAGATCGTGGTGAAGGTCGTGATGCAGATCATGGTGCACGTCGTGATGTAAGAGCGAATGGTCAGCTTGTGCTGCCAGGCTGTGCAGCAGCGCCTCCGGATGATGGTGCACTAACTCATGGTCAGCATGAGCATGATGGTGGGCG AGTGCTTC ] [+] EMBL CNS09AU8 [ TTAATATCAAGCTTTTTCACAAATTATTGTGCGTTACACAACAGTGAAATGGTGAATTTATTGTTTTACATCTAACCATACGGCAATGATTGACTTAGGAATAACGTTCGTTTATAGAACTACGGTATGCATTAACAGTACTATTTACGCCTTAGTGCTTTTCAGTGATGTTTGGTCCAGCCCGGCGGTGGTTTCGGAATTGGCACCCATTCAGTTACCTGCACCGGTCCCCAGACGCGCTTCCAGACACCGACGTACACCTTCTTCTCCTGCCAGCTCTTCACCCAGCGTGGCTTCCAGATGAACTTCTTCTTCCAGAATCCGGTCGGCTGCGGCGTA CAGTCAC GACGACATGATCATGGTGCACATGATGCACATCATGGTGGTGCACATCGTGATGCAGATCGTGGTGAAGGTCGTGATGCAGATCATGGTGCACGTCGTGATGTAAGAGCGAATGGTCAGCTTGTGCCGCCAGGTGGTGCAGCAGCGCCTCCGGATGATGGTGCACTAACTCATGGTCAGCATGAGCATGATGGTGGGCG AGTGCTTCGCTGGCAGCATAGCTTTCTAAATCACTAGCCAGGGAGTGCGGCAGAATC GATAATATGAGCGTCAATGATGCTGCAAGTAATACTGGCTCTCGTTGCCCGGTTCCCTCAGACAAACGTGGAGTCGACGTCGTCATGCTGGCCAAGATGGCTGAGCCGAACTTGCAATTCTCGCAGTTTGCCACACTGCTCATCGTACCGCTGCTCCAGCTGTTCATACAGTGTGGTTTGGGCCGTCGACAACCGTTGCACCATTTCCACCTGTTTGGCTTCACTCTTAGCTAGCTTGCGCTGCAGCTCCACCACAAGATCGGTCAGATCCTGCAGCT ] [+] EMBL CNS08P3O [ ATTTATTGTTTTACATCTAACCATACGGCAATGATTGACTTAGGAATAACGTTCGTGTATAGAACTACGGTATGCATTAACAGTACTATTTACGCCTTAGTGCTTTTCAGTGATGTTTGGTCCAGCCCGGCGGTGGTTTCGGAATTGGCACCCATTCAGTTACCTGCACCGGTCCCCAGACGCGCTTCCAGACACCGACGTACACCTTCTTCTCCTGCCAGCTCTTCACCCAGCGTGGCTTCCAGATAAACTTCTTCTTCCAGAATCCGGTCGGCTGCGGCGTAG AGTCAC GACGACATGATCATGGTGCACATGATGCACATCATGGTGGTGCACATCGTGATGCAGACCGTGGTGAAGGTCGTGATGCAGACCATGGTGCACGTCGTGATGTAAGACCGAATGGTCAGCTTGTGCTGCCAGGCTGTGCAGCAGCGCCTCCGGATGATGGTGCACTAACTCATGGTCAGCATGAGCATGATGGTGGGCG AGTTCTTCGCTGGCAGCATAGCTTTCTAAATCACTAGCCAGGGAGTGCGGCAGAATC GATAATATGAGCGTCAATGATGCTGCAAGTAATACTGGCTCTCGTTGCCCGGTTCCCTCAGACAAACGTGGAGTCGACGTCGTCATGCTGGCCAAGATGGCTGAGCCGAACTTGCAATTCTCGCAGTTTGCCACACTGCTCATCGTACCGCTGCTCCAGCTGTTCATACAGTGTGGTTTGGGCCGTCGACAACCGTTGCACCATTTCCACCTGTTTGGCTTCACTCTTAGCTAGCTTGCGCTGCAGCTCCACCACAAGATCGGTCAGATCCTGCAGCTTGCGCGTAAAAACTCGCTCGAGAGCATTCAGCCGTACCTCATAATCTA ] [-] EMBL CNS08P3N [ TTCAGTTACCTGCACCGGTCCCCAAACGCGCTTCCAAACACCGACGTACACCTTCTTCTCCTGCCAGCTCTTCACCCAGCGTGGCTTCCAGATAAACTTCTTCTTCCAGAATCCGGTCGGCTGCGGCGTAGAAGTCAC GACGACATGATCATGGTGCACATGATGCACATCATGGTGGTGCACATCGTGATGCAGATCGTGGTGAAGGTCGTGATGCAGATCATGGTGCACGTCGTGATGTAAGAGCGAATGGTCAGCTTGTGCTGCCAGGCTGTGCAGCAGCGCCTCCGGATGATGGTGCACTAACTCATGGTCAGCATGAGCATGATGGTGGGCGAAGT CTTCGCTGGCAGCATAGCTTTCTAAATCACTAGCCAGGGAGTGCGGCAGAATCAGATAATATGAGCGTCAATGATGCTGCAAGTAATACTGGCTCTCGTTGCCCGGTTCCCTCAGACAAACGTGGAGTCGACGTCGTCATGCTGGCCAAGATGGCTGAGCCGAACTTGCAATTCTCGCAGTTTGCCACACTGCTCATCGTACCGCTGCTCCAGCTGTTCATACAGTGTGGTTTGGGCCGTCGACAACCGTTGCACCATTTCCACCTGTTTGGCTTCACTCTTAGCTAGCTTGCGCTGCAGCTCCACCACAAGATCGGTCAGATCCTGCAG TTGCGCGTAAAATCTCGCTCGAGAGCATTCAGCCGTACCTCATAATCTACCGACGAACTGCCGCCCGTCTGCTCTAGCTGACCTACTTTCTGCTCCAGAGCACTTAACCGGTCAGTGTGCCCGGTTGTCAGCTGATCTTGTGAATATCGGACGCAGTGTAGGTCGTCTTGTGCCGGCTAAAGTACGACAGCCAGCCCGTATTCTCGTACTCTTCTGGTTGCATATTGCTCATCCTGCCGCGATTCACTCA] [-] EMBL BX623989 [ TCTTCCAGAATCCGGTCGGCTGCGGCGTAGCAGTCACGGACGNCATGATAATGGTGCACATGATGCACATCATGGTGGTGCACATCGTGATGCAGATCGTGGTGAAGGTCGTGATGCAGATCATGGTGCANGTCGTGATGTAAGAGCGAATGGTCAGCTTGTGCCGCCAGGCTGTGCAGCAGCGCCTCCGGATGATGGTGCACTAACTCATGGTCAGCATGAGCATGATGGTGGGCG AGTGCTTCGCTGGCAGCATAGCTTTCTAAATCACTAGCCAGGGAGTGCGGCAGAATC GATAATATGAGCGTCAATGATGCTGCAAGTAATACTGGCTCTCGTTGCCCGGTTCCCTCAGACAAACGTGGAGTCGACGTCGTCATGCTGGCCAAGATGGCTGAGCCGAACTTGCAATTCTCGCAGTTTGCCACACTGCTCATCGTACCGCTGCTCCAGCTGTTCATACAGTGTGGTTTGGGCCGTCGACAACCGTTGCACCATTTCCACCTGTTTGGCTTCACTCTTAGCTAGCTTGCGCTGCAGCTCCACCACAAGATCGGTCAGATCCTGCAGCTTGC ] consensusID : consensus_8845#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 853 fasta sequence [CTGATAAAGGGGGGAAATTAAAAGTGCCTTTTGGCGGGCCCCGCCCAAACAAATGGCGCTGGTTTCGTGTTGTGTGTGTTGTTGTTGGTTNATTGTTTGTTGTTCCGGAATTTGTTNTTTAAAAGATTGGGGTGTTGTGAAAATGATNCCAAAGCCTTTTGTGTTGCGACCCGAAAGTTAGTTGGTAACCTGTGTAACACAAACAGTGAAAATGGTGGAATTTTATTGTNTTTACATCCTAACCATACGGCCAATGGATTGACTTTAGGAATAACGTTCGTTTATAGAACTACGGTTATGCATTAACAGTACTATTTGCGGCCTTAGTGCTTTTCAAGTGATTTTGGTCCAGCCCGGCGGTGGTTTCGGAATTGGCACCCATTCAGTTACCTGCACCGGTCCCCAGACGCGCTTCCAGACACCGACGTACACCTTCTTCTCCGTGCCAGCTCTTCACCCAGCGTGGCTTCCAGATGAACTTCTTCTTCCAGAATCCGGTCGGCTGCGGCGTAGCAGTCACGACGACATGATCATGGTGCAACATGATGCACATCATGGTGGTGCACATCGTGATGCAGATCGTGGTGAAGGTCGTGATGCAGATCATGGTGCACGTCGTGATGTAAGAGCGAATGGTCAGCTTGTGTCGCCAGGCTGTGCAGCAGCGCCTCCGGATGATGGTGCACTAACTCATGGTCAGCATGAGCATGATGGTGGGCGAGTGCTTCGCTGGCAGACATAGCTTTCTAAATCACTAGCCAGGGAGTGCGGCAGAATCGATAATATGAGCGTCAATAATGCTGACAAGTAATACTGGCTCGATTGACTCGGGATNAACCTCGGGGNATTCTTG] [-] EMBL AL930765 [CTGATAAAGGGGGGAAATTAAAAGTGCCTTTTGGCGGGCCCCGCCCAAACAAATGGCGCTGGTTTCGTGTTGTGTGTGTTGTTGTTGGTTNATTGTTTGTTGTTCCGGAATTTGTTNTTTAAAAGATTGGGGTGTTGTGAAAATGATNCCAAAGCCTTTTGTGTTGCGACCCGAAAGTTAGTTGGTAACCTGTGTAACACAAACAGTGAAAATGGTGGAATTTTATTGTNTTTACATCCTAACCATACGGCCAATGGATTGACTTTAGGAATAACGTTCGTTTATAGAACTACGGTTATGCATTAACAGTACTATTTGCGGCCTTAGTGCTTTTCAAGTGATTTTGGTCCAGCCCGGCGGTGGTTTCGGAATTGGCACCCATTCAGTTACCTGCACCGGTCCCCAGACGCGCTTCCAGACACCGACGTACACCTTCTTCTCCGTGCCAGCTCTTCACCCAGCGTGGCTTCCAGATGAACTTCTTCTTCCAGAATCCGGTCGGCTGCGGCGTAGCAGTCACGACGACATGATCATGGTGCAACATGATGCACATCATGGTGGTGCACATCGTGATGCAGATCGTGGTGAAGGTCGTGATGCAGATCATGGTGCACGTCGTGATGTAAGAGCGAATGGTCAGCTTGTGTCGCCAGGCTGTGCAGCAGCGCCTCCGGATGATGGTGCACTAACTCATGGTCAGCATGAGCATGATGGTGGGCGAGTGCTTCGCTGGCAGACATAGCTTTCTAAATCACTAGCCAGGGAGTGCGGCAGAATCGATAATATGAGCGTCAATAATGCTGACAAGTAATACTGGCTCGATTGACTCGGGATNAACCTCGGGGNATTCTTG] consensusID : consensus_8845#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 467 fasta sequence [TTAATGTTAAAAACGGTGTAATGTAAAAATCAGCCGAGAAAATACGTTTATTAGGGCTAATTGTTCAACACCTCCTCCGGGGTGAAGCGGCTGTTCCAGTCGAGTTTGCATGCAATGAAGGAAGCTTTCCGATAAAGGTCATTTTCATCGTTTTCAATATTATCCATAAACGATCTGCGAATGAGTGTATCAGCCATCTGTAAAGCTCCATCACACACCGTTGAAATACTGGCACAGGAAAAGAGGAACCATTTTTGATCACTTGTAATCATCGTGTGTGTGTCCCTGTGTTTCTAGCTTTACTCCAATACAGATTTGCTAATTAGAGACCGTTTTTCAGCGGCACTGTCCATTCTTGTAGCTTTAAACATTATAAAACTCTTTTTATCACAGCAATGCAACAAGATTTGGTATGAATCAATGAACCGGCACCGCACAATTGTAGGCCATTTTCTACGATCGCGCGG] [-] EMBL BM653086 [TTAATGTTAAAAACGGTGTAATGTAAAAATCAGCCGAGAAAATACGTTTATTAGGGCTAATTGTTCAACACCTCCTCCGGGGTGAAGCGGCTGTTCCAGTCGAGTTTGCATGCAATGAAGGAAGCTTTCCGATAAAGGTCATTTTCATCGTTTTCAATATTATCCATAAACGATCTGCGAATGAGTGTATCAGCCATCTGTAAAGCTCCATCACACACCGTTGAAATACTGGCACAGGAAAAGAGGAACCATTTTTGATCACTTGTAATCATCGTGTGTGTGTCCCTGTGTTTCTAGCTTTACTCCAATACAGATTTGCTAATTAGAGACCGTTTTTCAGCGGCACTGTCCATTCTTGTAGCTTTAAACATTATAAAACTCTTTTTATCACAGCAATGCAACAAGATTTGGTATGAATCAATGAACCGGCACCGCACAATTGTAGGCCATTTTCTACGATCGCGCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8845#0 TATTGTTTATACATATAACATACGGCAATTATTGACTTAGGAATAACGTTCGTTTATAGA 60 consensus_8845#4 ------------------------------------------------------------ consensus_8845#2 ------------------------------------------------------------ consensus_8845#3 ------------------------------------------------------------ consensus_8845#1 ------------------------------------------------------------ consensus_8845#0 ACTACGGTATGCATTAACAGTACTATTTACGCCTTAGTGCTTTTCAGTGATGTTTGGTCC 120 consensus_8845#4 ------------------------------------------------------------ consensus_8845#2 ------------------------------------------------------------ consensus_8845#3 ------------------------------------------------------------ consensus_8845#1 ---------------------CACACCAGCACTTTGCTCGACTGAGCAGTTTTTCAAACA 39 consensus_8845#0 AGCCCGGCGGTGGTTTCG-GAATTGGCACCCATTCAGTTACCTGCACCGGTCCCCAGACG 179 consensus_8845#4 ------------------------------------------------------------ consensus_8845#2 ------------------------------------------------------------ consensus_8845#3 ------------------------------------------------------------ consensus_8845#1 AGTTAACCACCGTTTTCGAGATTTTGTGTAGGGAAATCGAGAAGAAAAAATAAACAGAAA 99 consensus_8845#0 CGCTTTCAGACACCGACGTACACCTTCTTCTCCTGCCAGCTCTTCACCCAGCGTGGCTTC 239 consensus_8845#4 ------------------------------------------------------------ consensus_8845#2 ------------------------------------------------------------ consensus_8845#3 ------------------------------------------------------------ consensus_8845#1 CGGCTTATGGAAAT-ATGTGTCTCTTCCGGAAAGGGCATCCATGGCCTCGATACAGTTTT 158 consensus_8845#0 CAGATGAACTTCTTCTTCCAGAATCCGGTCGGCTGCGGCGTACAGTTACGACGACATGAT 299 consensus_8845#4 ------------------------------------------------------------ consensus_8845#2 ------------------------------------------------------------ consensus_8845#3 ------------------------------------------------------------ consensus_8845#1 C-GACGAATTAATTTGTAGTGAATTTATT--ATCTCGATCCCAAGGGAGGAAAGCATATG 215 consensus_8845#0 CATGGTGCACATGATGCACATCATGGTGGTGCACATCGTGATGCAGATCGTGGTGAAGGT 359 consensus_8845#4 ------------------------------------------------------------ consensus_8845#2 ------------------------------------------------------------ consensus_8845#3 ------------------------------------------------------------ consensus_8845#1 CATG-TGTGTACGACTTTACGGAATGTAGGGTGAATGTGAGCTTGGTGCGTGATAAATAA 274 consensus_8845#0 CGTGATGCAGATCATGGTGCACGTCGTGATGTAAGAGCGAATTGTCAGCATGAGCATGAT 419 consensus_8845#4 ------------------------------------------------------------ consensus_8845#2 ------------------------------------------------------------ consensus_8845#3 ------------------------------------------------------------ consensus_8845#1 -GCGAGAATTTATACGATTTTTGTAACGACG-GTGAGTGAATCGAGAG---GAACAAAGG 329 consensus_8845#0 GGTGGGCGAGTTCTTTGCTGGCAGCATAGCTTTCTAAATCACTAGCCAGGGAGTGCGGCA 479 consensus_8845#4 ------------------------------------------------------------ consensus_8845#2 ------------------------------------------------------------ consensus_8845#3 ---------------------------------------CTGATAAAGGGGGGAAATTAA 21 consensus_8845#1 GCAGGATGAGCAATATGCAACCAGAAGAGTACGAGAATACGGGCTGGCTGTCGTACTTTA 389 consensus_8845#0 GAATCGATAATATGAGCGTCAATGATGCTGCAAGTAATACTGGCTATTATCGATACCATT 539 consensus_8845#4 ------------------------------------------------------------ consensus_8845#2 ------------------------------------------------------------ consensus_8845#3 AAGTGCCTTTTGGCGGGCCCCGCCCAAACAAATGGCGCTGGTTTCGTGTTGTGTGTGTTG 81 consensus_8845#1 GCCGGCACAAGACGACCTACACTGCGTCCGATATTCACAAGATCAGCAACGAGCTGAACA 449 consensus_8845#0 GAACACAAGTTTGTTTTACGCAT-CGCAGCATATTTACGCATAATCATAAAGTGCCTTTC 598 consensus_8845#4 ------------------------------------------------------------ consensus_8845#2 ----------------------------------------------------TAGTTTCA 8 consensus_8845#3 TTGTTGGTTNATTGTTTGTTGTT-CCGGAATTTGTTNTTTAAAAGATTGGGGTGTTGTGA 140 consensus_8845#1 ATGTGCGCAAGAACCTGACCGCCACCCAGTACGCGTACGGCGAGCTGAGCAGTGAGCTGA 509 consensus_8845#0 GACGTTCGGTACATCCGTCACTTCCGCTGCCAACGCGGAGAACAATGGTAAGGGTTTTTT 658 consensus_8845#4 ------------------------------------------------------------ consensus_8845#2 CGATGGAATCGAATTTTTTTTTCTTGTTTTTAATATCAAGCTTTTTCACAAATTATTGTA 68 consensus_8845#3 AAATGATNCCAAAGCCTTTTGTGTTGC----GACCCGAAAGTTAGTTGGTAACCTGTGTA 196 consensus_8845#1 AGGCACTCAAGAGTCTCCAGGAACAGCAGC--GCTTGGTGGACGAGTACGAGCA-----A 562 consensus_8845#0 ACAGGGACAGGAAGCCCTGATATGAATCCGATGACGATGAAAATAAACGTTGCACTTATT 718 consensus_8845#4 ------------------------------------------------------------ consensus_8845#2 CTTTACACAACAGTGAAATGGTGAA--TTTATTGTTTT-ACATC-TAACCATACGGC-AA 123 consensus_8845#3 ACACAAACAGTGA--AAATGGTGGAATTTTATTGTNTTTACATCCTAACCATACGGCCAA 254 consensus_8845#1 AGGGCGGCAGGCAGCAAAGGCTCGAAATCGACCGACAAGCGGCTGAAGGAACAGGCCGAC 622 consensus_8845#0 TCTGCCACATTTCGCACCATTTCGCCTCTTCGCGTGCATATTTGGAAAAGAAATATTGCA 778 consensus_8845#4 ------------------------------------------------------------ consensus_8845#2 TG-ATTGACTT-AGGAATAACGTTCGTTTATAGAACTACGGT-ATGCATTAACAGTACTA 180 consensus_8845#3 TGGATTGACTTTAGGAATAACGTTCGTTTATAGAACTACGGTTATGCATTAACAGTACTA 314 consensus_8845#1 GAAATCAAAAGTCTCAAGAGTGATCTTGCGAGCTGCCGGAAT--GAGCTGTCCAAGCAGA 680 consensus_8845#0 CCATTTTCTTGGTTGCTACCTTTCGCGACGCTCGTTGGCTTTGGTT-TTCATTCCACATT 837 consensus_8845#4 ----------------------------TTAATGTTAAAAACGGTG-TAATGTAAAAATC 31 consensus_8845#2 TTTACG-CCTTAGTGCTTTTCA-GTGATGTTTGGTCCAGCCCGGCGGTGGTTTCGGAATT 238 consensus_8845#3 TTTGCGGCCTTAGTGCTTTTCAAGTGAT-TTTGGTCCAGCCCGGCGGTGGTTTCGGAATT 373 consensus_8845#1 TCGCCGCCCTGAAGGTGTCGGTTGGCGAGCAGAGCAAGAAAAAGGGTGTGTTTGGGAGGT 740 * * * consensus_8845#0 GGCTGTAGGTTTGTGTTGTTTTTTTTTCATGATTTCCTAT--TGCTGAGTTCCAAAGGGA 895 consensus_8845#4 AGCCGAGAAAATACGTTTATTAGGGCTAATTGTTCAACAC--CTC----CTCCGGGGTGA 85 consensus_8845#2 GGC---ACCCATTCAGTTACCTGCACCGGTCCCCAGACGCGCTTCCAGACACCGACGTAC 295 consensus_8845#3 GGC---ACCCATTCAGTTACCTGCACCGGTCCCCAGACGCGCTTCCAGACACCGACGTAC 430 consensus_8845#1 GGTGGCAAGCCTTCGC--ACGGCAACCCACCGCCAGCCGGC------AGTAACGCCATGA 792 * * * consensus_8845#0 CCGGGATCAATATGGGCGATA-TCGCTATAGCATGCAAT---GAAGGGAGCTTTCCGATA 951 consensus_8845#4 A-GCGGCTGTTCCAGTCGAGT-TT------GCATGCAAT---GAAGGAAGCTTTCCGATA 134 consensus_8845#2 ACCTTCTTCTCC-TGCCAGCTCTTCACCCAGCGTGGCTTCCAGATGAACTTCTTCTTCCA 354 consensus_8845#3 ACCTTCTTCTCCGTGCCAGCTCTTCACCCAGCGTGGCTTCCAGATGAACTTCTTCTTCCA 490 consensus_8845#1 CCTTGAGTCTGGAAAGTCGCA-TCATTGCCGCGGAG------GTACAGATCGATCAGCTG 845 * ** * ** consensus_8845#0 AA----GGTCATTTTCATCGTTTTCAATATTATC-CATAAACGATCTGCG-AATGA-GTG 1004 consensus_8845#4 AA----GGTCATTTTCATCGTTTTCAATATTATC-CATAAACGATCTGCG-AATGA-GTG 187 consensus_8845#2 GAATCCGGTCGGCTGCGGCGTAGCAGTCACGACGACATGATCATGGTGCA-CATGATGCA 413 consensus_8845#3 GAATCCGGTCGGCTGCGGCGTAGCAGTCACGACGACATGATCATGGTGCAACATGATGCA 550 consensus_8845#1 ACAACCGGGCACACTGGCCG-GTTAAGTGCTCTGGAGCAGAAAGTAGGTCAGCTAGAGCA 904 ** * ** * * * consensus_8845#0 TATCAGCCATCTGTAAAGCTCCATCACACACCGTTGAAATACTGGCACAGGAAAAGAGGA 1064 consensus_8845#4 TATCAGCCATCTGTAAAGCTCCATCACACACCGTTGAAATACTGGCACAGGAAAAGAGGA 247 consensus_8845#2 CATCATGGTGGTGCACATCGTGAT-GCAGATCGTGGTGAAGGTCGTGATGCAGATCATGG 472 consensus_8845#3 CATCATGGTGGTGCACATCGTGAT-GCAGATCGTGGTGAAGGTCGTGATGCAGATCATGG 609 consensus_8845#1 GA-CGGGCGGCAGTTCGACGGTAGATTATGAGGTACGGCTGAATGCTCTCGAAGCGAGAT 963 * * * * * * ** * * * consensus_8845#0 ACCATTTT-TGAT-CACTTGTAATCATCGTGTGTGTGTCCCTGTGTT-TCTAGCTTTACT 1121 consensus_8845#4 ACCATTTT-TGAT-CACTTGTAATCATCGTGTGTGTGTCCCTGTGTT-TCTAGCTTTACT 304 consensus_8845#2 TGCACGTCGTGATGTAAGAGCGAATGGTCAGCTTGTGCTGCCAGGCTGTGCAGCAGCGCC 532 consensus_8845#3 TGCACGTCGTGATGTAAGAGCGAATGGTCAGCTTGTGTCGCCAGGCTGTGCAGCAGCGCC 669 consensus_8845#1 TTTACGCTGCAAGCTGCAGGATCTTGACCGATCT-TGTGGTGGAGCTGCAGACGCAAGCT 1022 * * * * ** * * * * consensus_8845#0 CC--AATACAGATTT--GCTAATTAGAGACCGTTTTTCAGCGGCACTGTCCATTCTTGTA 1177 consensus_8845#4 CC--AATACAGATTT--GCTAATTAGAGACCGTTTTTCAGCGGCACTGTCCATTCTTGTA 360 consensus_8845#2 TCCGGATGATGGTGC--ACTAACTCATGGTCAGCATG-AGCATGATGGTGGGCGAGTGCT 589 consensus_8845#3 TCCGGATGATGGTGC--ACTAACTCATGGTCAGCATG-AGCATGATGGTGGGCGAGTGCT 726 consensus_8845#1 AGCTAANAGTGAAGCCAAACAGGTGGAAATGGTGCAACGGTATGTCGACGTGCCCAAACC 1082 * * * * * consensus_8845#0 GCTTTAAACATTATAAAACTCT----TTTTATCACAGCAATGCAACAAGATT--TGG--T 1229 consensus_8845#4 GCTTTAAACATTATAAAACTCT----TTTTATCACAGCAATGCAACAAGATT--TGG--T 412 consensus_8845#2 TCGCTGGCAG-CATAGCTTTCTAAATCACTAGCCAGGGAGTGCGGCAGAATCGATAA--T 646 consensus_8845#3 TCGCTGGCAGACATAGCTTTCTAAATCACTAGCCAGGGAGTGCGGCAGAATCGATAA--T 784 consensus_8845#1 ACACTGTATGANACAGCTGGAGCAGCGGTACGATGAGCAGTGTGGCAAACTGCGAGAATT 1142 * * * * * * ** ** * * consensus_8845#0 ATGAA--TCAATGAACCGGCACCGCACAATTGTAGGCCATTTTCTACG-ATTTCGTATTA 1286 consensus_8845#4 ATGAA--TCAATGAACCGGCACCGCACAATTGTAGGCCATTTTCTACG-ATCGCGCGG-- 467 consensus_8845#2 ATGAGCGTCAATGA--TGCTG-CAAGTAATACTGGCTCTCGTTGCCCG-GTTCCCTCAGA 702 consensus_8845#3 ATGAGCGTCAATAA--TGCTGACAAGTAATACTGGCTCGATTGACTCG-G--------GA 833 consensus_8845#1 GCAAGTTNCGGTCAGGCATCTTGGCCAGACATGACGACGTCNACTCCACGTAGTGTCTGA 1202 * * * * * * * consensus_8845#0 C----------------------------------------------------------- 1287 consensus_8845#4 ------------------------------------------------------------ consensus_8845#2 CAAACGTGGAGTCGACGTCGTCATGCTGGCCAAGATGGCTGAGCCGAACTTGCAATTCTC 762 consensus_8845#3 TNAACCTCGGGGNATTCTTG---------------------------------------- 853 consensus_8845#1 GGGAACCTGGGCA----------------------------------------------- 1215 consensus_8845#0 ------------------------------------------------------------ consensus_8845#4 ------------------------------------------------------------ consensus_8845#2 GCAGTTTGCCACACTGCTCATCGTACCGCTGCTCCAGCTGTTCATACAGTGTGGTTTGGG 822 consensus_8845#3 ------------------------------------------------------------ consensus_8845#1 ------------------------------------------------------------ consensus_8845#0 ------------------------------------------------------------ consensus_8845#4 ------------------------------------------------------------ consensus_8845#2 CCGTCGACAACCGTTGCACCATTTCCACCTGTTTGGCTTCACTCTTAGCTAGCTTGCGCT 882 consensus_8845#3 ------------------------------------------------------------ consensus_8845#1 ------------------------------------------------------------ consensus_8845#0 ------------------------------------------------------------ consensus_8845#4 ------------------------------------------------------------ consensus_8845#2 GCAGCTCCACCACAAGATCGGTCAGATCCTGCAGCTTGCGCGTAAAAACTCGCTCGAGAG 942 consensus_8845#3 ------------------------------------------------------------ consensus_8845#1 ------------------------------------------------------------ consensus_8845#0 ------------------------------------------------------------ consensus_8845#4 ------------------------------------------------------------ consensus_8845#2 CATTCAGCCGTACCTCATAATCTACCGACGAACTGCCGCCCGTCTGCTCTAGCTGACCTA 1002 consensus_8845#3 ------------------------------------------------------------ consensus_8845#1 ------------------------------------------------------------ consensus_8845#0 ------------------------------------------------------------ consensus_8845#4 ------------------------------------------------------------ consensus_8845#2 CTTTCTGCTCCAGAGCACTTAACCGGTCAGTGTGCCCGGTTGTCAGCTGATCTTGTGAAT 1062 consensus_8845#3 ------------------------------------------------------------ consensus_8845#1 ------------------------------------------------------------ consensus_8845#0 ------------------------------------------------------------ consensus_8845#4 ------------------------------------------------------------ consensus_8845#2 ATCGGACGCAGTGTAGGTCGTCTTGTGCCGGCTAAAGTACGACAGCCAGCCCGTATTCTC 1122 consensus_8845#3 ------------------------------------------------------------ consensus_8845#1 ------------------------------------------------------------ consensus_8845#0 --------------------------------------------- consensus_8845#4 --------------------------------------------- consensus_8845#2 GTACTCTTCTGGTTGCATATTGCTCATCCTGCCGCGATTCACTCA 1167 consensus_8845#3 --------------------------------------------- consensus_8845#1 --------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||