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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8847#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 727 fasta sequence
[ACCCACGCGTCCGGTTCATCCGAGTAACAGCAGCAGCAGCAGCAGCATCCAACCGGTTGCCTTTAGTACAGTAGTGTACTTTATAGTGTTGCGTGTGAGAGTGTGTTCAATCCCCGTATCCGAGGATGTTGAAGAAAACGATCGTTCTGAGCTGCCTGGTTGCGGTGGTTCTCTGCGCGGCTGACCTGGAAACGGCCGAAACTTCCTGGGGAGGCGGTGGTGGTGGTGGCTGGAGCAGCGGCGGAGGTGGTGGCGGCTGGAGCAGTGGCGGCGGCGGCGGCTATGGCGGTGGCAAAAAGGTGATCATCATCTCGTCCGGTGGCGGTGGACACGGAGGCAGCGGAGGCTGGAGCAGCGGTGGACGCAGCCTCGGCGGTGGTGGCGGATGGTCTAGCGGTGGCAGCGGACTTGGCAAGGGCTGGTCCAGCGGCGGTGGATCGTACGGAGGCGGTAGCTCTTACGGAGGCGGTGGCTACTCGAAGGGTTGGCCCGTCAGCAAGGGCTGGTCCAGCGGAGGCTCCTCGTTCGGTGGCGGATACGGTGGTGGCAGCAGC-T-TTGGCGGTGGCCACTCGGGAGGTGGCTGGAGCTCGGGCGGCAGCAGCCTCGGTGGATGG-CCGTCGGGTGGTGGCGTGAGCAAGGGATGGCCGTCGTCGGGCGGTGGATACGGTGGCAGCCA-GGGATGGTCCTCGGGCGGTAGCGGTGGATACGGCGGCGGTAGCCATGGAAG]
[+] EMBL BM626027 [ACCCACGCGTCCGGTTCATCCGAGTAACAGCAGCAGCAGCAGCTGCATCCAACCGGTTGCCTTTAGTACAGTAGTGTACTTTATAGTGTTGCGTGTGAGAGTGTGTTCAATCCCCGTATCCGAGGATGTTGAAGAAAACGATCGTTCTGAGCTGCCTGGTTGCGGTGGTTCTCTGCGCGGCTGACCTGGAAACGGCCGAAACTTCTTGGGGAGGCGGTGGTGGTGGTGGCTGGAGCAGCGGCGGAGGTGGTGGCGGCTGGAGCAGCGGCGGCGGTGGCGGTTATGGCGGTGGCAAGAACGTGATCATCATTTCGTCCGGCGGCGGTGGACACGGAGGCAGCGGAGGCTGGAGCAGCGGTGGACGCAGCCTCGGCGGTGGTGGCGGATGGTCTAGCGGTGGTAGCGGACTTGGCAAGGGCTGGTCCAGCGGCGGTGGATCGTACGGAGGCGGTGGCTCTTACGGAGGCGGTGGCTACTCTAAGGGTTGGCCCGTCAGCAAGGGCTGGTCCAGCGGAGGCTCCTCGTTCGGTGGCGGATACGGTGGTGGCAGCAGC T TTGGCGGTGGCCACTCGGGAGGTGGCTGGAGCTCGGGCGGCAGCAGCCTCGGTGGATGG CCGTCGGGTGGTGGCGTAAGCAAGGGATGGCCGTCGTCGGGCGGTGGATACGGTGGCAGCCAGGGGATGGTCCTCG ]
[+] EMBL BM611980 [ CCGGTTCATCCGAGTAA CAGCAGCAGCATCCAATCGGTGGTTTTTAGTACAGTAGTGTACTTTATAGTGTTGCGTGAGAGAGTGTGTTTAATCCCCGTATCCGAGGATGTTGAAGAAAACGATCGTTCTGAGCTGCCTGGTTGCGGTGGTTCTCTGCGCGGCTGACCTGGAAACGGCCGAAACTTCCTGGGGAGGCGGTGGTGGTGGTGGCTGGAGCAGCGGCGGAGGTGGTGGTGGCTGGAGCGGTGGCGGCGGCGGCGGCTATGGCGGTGGCAAAAAGGTGATCATCATCTCGTCCGGTGGCGGTGGACACGGAGGTAGCGGAGGCTGGAGCAGCGGTGGACGCAGCCTCGGCGGTGGTGGCGGATGGTCTAGCGGTGGCAGCGGACTTGGCAAGGGCTGGTCCAGCGGCGGTGGATCGTACGGAGGCGGTAGCTCTTACGGAGGCGGTGGCTACTCGAAGGGTTGGCCCGTCAGCAAGGGCTGGTCCAGCGGAGGCTCCTCGTTCGGTGGCGGATACGGTGGTGGCAGCAGC T TTGGCGGTGGCCACTCGGGAGGTGGCTGGAGCTCGGGCGGCAGCAGCCTCGGTGGATGG CCGTCGGGTGGTGGCGTGAGCAAAGGATGGCCGTCGTCGGGCGGTGGATACGGTGGCAGCCA GGGATGGT ]
[+] EMBL BM650600 [ CCGGTTCATCCGAGTAACAGCAGCAGCAGCAGCAGCATCCAACCGGTTGCCTTTAGTACAGTAGTGTACTTTATAGTGTTGCGTGTGAGAGTGTGTTCAATCCCCGTATCCGAGGATGTTGAAGAAAACGATCGTTCTGAGCTGCCTGGTTGCGGTGGTTCTCTGCGCGGCTGACCTGGAAACGGCCGAAACTTCTTGGGGAGGCGGTGGTGGTGGTGGCTGGAGCAGCGGCGGAGGTGGTGGCGGCTGGAGCAGCGGCGGCGGTGGCGGTTATGGCGGTGGCAAGAAGGTGATCATCATTTCGTCCGGCGGCGGTGGACACGGAGGCAGCGGAGGCTGGAGCAGCGGTGGACGCAGCCTCGGCGGTGGTGGCGGATGGTCTAGCGGTGGTAGCGGACTTGGCAAGGGCTGGTCCAGCGGCGGTGGATCGTACGGAGGCGGTGGCTCTTACGGAGGCGGTGGCTACTCTAAGGGTTGGCCCGTCAGCAAGGGCTGGTCCAGCGGAGGCTCCTCGTTCGGTGGCGGATACGGTGGTGGCAGCAGC T TTGGCGGTGGCCACTCGGGAGGTGGCTGGAGCTCGGGCG ]
[+] EMBL BM643382 [ ccgcgAGTAACAGCAGCAGCATCCAATCGGTGGTTTTTAGTACAGTAGTGTACTTTATAGTGTTGCGTGAGAGAGTGTGTTTAATCCCCGTATCCGAGGATGTTGAAGAAAACGATCGTTCTGAGCTGCCTGGTTGCGGTGGTTCTCTGCGCGGCTGACCTGGAAACGGCCGAAACTTCCTGGGGAGGCGGTGGTGGTGGTGGCTGGAGCAGCGGCGGAGGTGGTGGTGGCTGGAGCGGTGGCGGCGGCGGCGGCTATGGCGGTGGCAAAAAGGTGATCATCATCTCGTCCGGTGGCGGTGGACACGGAGGTAGCGGAGGCTGGAGCAGCGGTGGACGCAGCCTCGGCGGTGGTGGCGGATGGTCTAGCGGTGGCAGCGGACTTGGCAAGGGCTGGTCCAGCGGCGGTGGATCGTACGGAGGCGGTAGCTCTTACGGAGGCGGTGGCTACTCGAAGGGTTGGCCCGTCAGCAAGGGCTGGTCCAGCGGAGGCTCCTCGTTCGGTGGCGGATACGGTGGTGGCAGCAGC T TTGGCGGTGGCCACTCGGGAGGTGGCTGGAGCTCGGGCGGCAGCAGCCTCGGTGGATGG CCGTCGGGTGGTGGCGTGAGCAAGGGATGGCCGTCGTCGGGCGGTGGATACGGTGGCAGC ]
[+] EMBL BM632910 [ ccgGCAGCAGCAGCAGCATCCAACCGGTTGCCTTTAGTACAGTAGTGTACTTTATAGTGTTGCGTGTGAGAGTGTGTTCAATCCCCGTATCCGAGGATGTTGAAGAAAACGATCGTTCTGAGCTGCCTGGTTGCGGTGGTTCTCTGCGCGGCTGACCTGGAAACGGCCGAAACTTCTTGGGGAGGCGGTGGTGGTGGTGGCTGGAGCAGCGGCGGAGGTGGTGGCGGCTGGAGCAGCGGCGGCGGTGGCGGTTATGGCGGTGGCAAGAAGGTGATCATCATTTCGTCCGGCGGCGGTGGACACGGAGGCAGCGGAGGCTGGAGCAGCGGTGGACGCAGCCTCGGCGGTGGTGGCGGATGGTCTAGCGGTGGTAGCGGACTTGGCAAGGGCTGGTCCAGCGGCGGTGGATCGTACGGAGGCGGTGGCTCTTACGGAGGCGGTGGCTACTCTAAGGGTTGGCCCGTCAGCAAGGGCTGGTCCAGCGGAGGCTCCTCGTTCGGTGGCGGATACGGTGGTGGCAGCAGCTT TTGGCGGTGGCCACTCGGGAGGTGGCTGGAGCTCGGGCGGCAGCAGCCTCGGTGGATGGCCCGTCGGGTGGTGGCGTAAGCAAGGGATGGCC ]
[+] EMBL BM638638 [ ccgTTTAGTACAGTAGTGTACTTTATAGTGTTGCGTGTGAGAGTGTGTTCAATCCCCGTATCCGAGGATGTTGAAGAAAACGATCGTTCTGAGCTGCCTGGTTGCGGTGGTTCTCTGCGCGGCTGACCTGGAAACGGCCGAAACTTCCTGGGGAGGCGGTGGTGGTGGTGGCTGGAGCAGCGGCGGAGGTGGTGGCGGCTGGAGCAGTGGCGGCGGCGGCGGCTATGGCGGTGGCAAAAAGGTGATCATCATCTCGTCCGGTGGCGGTGGACACGGAGGCAGCGGCGGCTGGAGCAGCGGTGGACGCAGCCTCGGCGGTGGTGGCGGATGGTCTAGCGGCGGCAGCGGACTTGGCAAGGGCTGGTCCAGCGGCGGTGGATCGTACGGAGGCGGTAGCTCTTACGGAGGCGGTGGCTACTCGAAGGGTTGGCCCGTCAGCAAGGGCTGGTCCAGCGGAGGCTCCTCGTTCGGTGGCGGATACGGTGGTGGCAGCAGCTT TTGGCGGTGGCCACTCGGGAGGTGGCTGGAGCTCGGGCGGCAGC ]
[+] EMBL BM620716 [ ccgCTGGAAACGGCCGAAACTTCCTGGGGAGGCGGTGGTGGTGGTGGCTGGAGCAGCGGCGGAGGTGGTGGTGGCTGGAGCGGTGGCGGCGGCGGCGGCTATGGCGGTGGCAAAAAGGTGATCATCATCTCGTCCGGTGGCGGTGGACACGGAGGTAGCGGAGGCTGGAGCAGCGGTGGACGCAGCCTCGGCGGTGGTGGCGGATGGTCTAGCGGTGGCAGCGGACTTGGCAAGGGCTGGTCCAGCGGCGGTGGATCGTACGGAGGCGGTAGCTCTTACGGAGGCGGTGGCTACTCGAAGGGTTGGCCCGTCAGCAAGGGCTGGTCCAGCGGAGGCTCCTCGTTCGGTGGCGGATACGGTGGTGGCAGCAGC T TTGGCGGTGGCCACTCGGGAGGTGGCTGGAGCTCGGGCGGCAGCAGCCTCGGTGGATGG CCGTCGGGTGGTGGCGTGAGCAAGGGATGGCCGTCGTCGGGCGGTGGATACGGTGGCAGCCA GGGATGGTCCTCGGGCGGTAGCGGTGGATACGGCGGCGGTAGCCATGGAAG]
[+] EMBL BM633845 [ GCGGCGGAGGTGGTGGCGGCTGGAGCAGTGGCGGCGGCGGCGGCTATGGCGGTGGCAAAAAGGTGATCATCATCTCGTCCGGTGGCGGTGGACACGGAGGCAGCGGCGGCTGGAGCAGCGGTGGACGCAGCCTCGGCGGTGGTGGCGGATGGTCTAGCGGCGGCAGCGGACTTGGCAAGGGCTGGTCCAGCGGCGGTGGATCGTACGGAGGCGGTAGCTCTTACGGAGGCGGTGGCTACTCGAAGGGTTGGCCCGTCAGCAAGGGCTGGTCCAGCGGAGGCTCCTCGTTCGGTGGCGGATACGGTGGTGGCAGCAGC T TTGGCGGTGGCCACTCGGGAGGTGGCTGGAGCTCGGGCGGCAGCAGCCTCGGTGGATGG CCATCGGGTGGTGGCGTGAGCAAGGGATGGCCGTCGTCGGGCGGTGGATACGGTG ]
[+] EMBL BM630506 [ GCGGCGGAGGTGGTGGCGGCTGGAGCAGCGGCGGCGGTGGCGGTTATGGCGGTGGCAAGAAGGTGATCATCATTTCGTCCGGCGGCGGTGGACACGGAGGCAGCGGAGGCTGGAGCAGCGGTGGACGCAGCCTCGGCGGTGGTGGCGGATGGTCTAGCGGTGGTAGCGGACTTGGCAAGGGCTGGTCCAGCGGCGGTGGATCGTACGGAGGCGGTGGCTCTTACGGAGGCGGTGGCTACTCTAAGGGTTGGCCCGTCAGCAAGGGCTGGTCCAGCGGAGGCTCCTCGTTCGGTGGCGGATACGGTGGTGGCAGCAGC T TTGGCGGTGGCCACTCGGGAGGTGGCTGGAGCTCGGGCGGCAGCAGCCTCGGTGGATGG CCGTCGGGTGGTGGCGTAAGCAAGGGATGGCCGTCGTCGGGCG ]
[+] EMBL BM655242 [ GCGGCGGAGGTGGTGGCGGCTGGAGCAGTGGCGGCGGCGGCGGCTATGGCGGTGGCAAAAAGGTGATCATCATCTCGTCCGGTGGCGGTGGACACGGAGGCAGCGGCGGCTGGAGCAGCGGTGGACGCAGCCTCGGCGGTGGTGGCGGATGGTCTAGCGGCGGCAGCGGACTTGGCAAGGGCTGGTCCAGCGGCGGTGGATCGTACGGAGGCGGTAGCTCTTACGGAGGCGGTGGCTACTCGAAGGGTTGGCCCGTCAGCAAGGGCTGGTCCAGCGGAGGCTCCTCGTTCGGTGGCGGATACGGTGGTGGCAGCAGC TCTTGGCGGTGGCC ]
[+] EMBL BM618268 [ GCGGCGGAGGTGGTGGCGGCTGGAGCAGTGGCGGCGGCGGCGGCTATGGCGGTGGCAAGAAGGTGATCATCATCTCGTCCGGCGGCGGTGGACACGGAGGCAGTGGAGGCTGGAGCAGCGGAGGACGCAGCCTCGGCGGTGGTGGCGGATGGTCTAGCGGCGGCAGCGGACTTGGCAAGGGCTGGTCCAGCGGCGGTGGATCGTACGGAGGCGGTAGC ]
consensusID : consensus_8847#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 526 fasta sequence
[CCGTGTCTTTCCAGTGCGCGAAACCGGTTTTTCCCCAGCCAGGGGGCTGTAGACATGGGGGGGGGTGAAGCTTTATTTGAATCTACACTCATTTTCACTCATCATTATTCGTAAATTCAAATAATTTAACATTCATTTTGTTATTTCTTTGTTAAGGATGAGCATACTACGACTATCTCCATTATTTCCTAAAATGTACTAACCAAGAAGATTCTCTAACAGTAATTTCAGCAATATAAGCAATGCTATAAACACTAGATTGAACATTATTTTCATTATTGAATAATATTTTTGTATGCGTTCTGTCTGTATTTCAGACTAGTCAAATGATAGTGGAAGATATTTTGGAATCTTGGCGCATGATATTAGTTTTCATAGCATGTTCTGTCTTGGCTAGTTTAATTCTCATCGCGATGCTTCGATGGATAGCAAAACCTCTAATATGGATTTCGATTATTGGAGTAATTACTGCGCTAAGCTATGGAGTTTACTACAGCTTCCGGCAATACCAGCAAATCCGTGCCAA]
[+] EMBL BM627070 [CCGTGTCTTTCCAGTGCGCGAAACCGGTTTTTCCCCAGCCAGGGGGCTGTAGACATGGGGGGGGGTGAAGCTTTATTTGAATCTACACTCATTTTCACTCATCATTATTCGTAAATTCAAATAATTTAACATTCATTTTGTTATTTCTTTGTTAAGGATGAGCATACTACGACTATCTCCATTATTTCCTAAAATGTACTAACCAAGAAGATTCTCTAACAGTAATTTCAGCAATATAAGCAATGCTATAAACACTAGATTGAACATTATTTTCATTATTGAATAATATTTTTGTATGCGTTCTGTCTGTATTTCAGACTAGTCAAATGATAGTGGAAGATATTTTGGAATCTTGGCGCATGATATTAGTTTTCATAGCATGTTCTGTCTTGGCTAGTTTAATTCTCATCGCGATGCTTCGATGGATAGCAAAACCTCTAATATGGATTTCGATTATTGGAGTAATTACTGCGCTAAGCTATGGAGTTTACTACAGCTTCCGGCAATACCAGCAAATCCGTGCCAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8847#0 ACCCACGCGTCCGGTTCATCCGAGTAACAGCAGCAGCAGCAGCAGCATCCAACCGGTTGC 60
consensus_8847#1 ----------CCGTGTCTTTCCAGTGCGCGAAACCGGTTTTTCCCCAGCCAGGGGGCTGT 50
*** ** * * *** * * * * * ** *** ** **
consensus_8847#0 CTTTA-GTACAGTAGTGTA-CTTTATAGTGTTGCGTGTGAGAGTGTGTTCAATCCCCGT- 117
consensus_8847#1 AGACATGGGGGGGGGTGAAGCTTTAT----TTGAATCTACACTCATTTTCACTCATCATT 106
* * * *** * ****** *** * * * **** ** * *
consensus_8847#0 ATCCGAGGATGTTGAAGAA---AACGATCGTTCTGA-GCTGCCTGGTTGCGGTGGTTCTC 173
consensus_8847#1 ATTCGTAAAT-TCAAATAATTTAACATTCATTTTGTTATTTCTTTGTTAAGGATGAGCAT 165
** ** ** * ** ** *** ** ** ** * * * *** ** * *
consensus_8847#0 TGCGCGGCTGACCTGGAAACGGCCGAAACT-TCCTGGGGAGGCGGTGGTGGTGGTGGCTG 232
consensus_8847#1 ACTACGACTATCTCCATTATTTCCTAAAATGTACTAACCAAGAAGATTCTCTAACAGTAA 225
** ** * * ** *** * * ** * * * * *
consensus_8847#0 GAGCAGCGGCGGAGGTGGTGGCGGCTGGAGCAGTGGCGGCGGCGGCGGCTATGGCGGTGG 292
consensus_8847#1 TTTCAGCAATATAAGCAATGCTAT---AAACACTAGATTGAACATTATTTTCATTATTG- 281
**** * * ** * ** * * * * **
consensus_8847#0 CAAAAAGGTGATCATCATCTCGTCCGGTGGCGGTGGACACGGAGGCAGCGGAGGCTGGAG 352
consensus_8847#1 -AATAATATTTTTGT-ATGCGTTCTGTCTGTATTTCAGACTAGTCAAATGATAGTGGAAG 339
** ** * * * ** ** * * * * ** * * * * **
consensus_8847#0 CAGCGGTGGACGCAGCCTCGGCG-GTGGTGGCGGATGGTCTAGCGGTGGCAGCGGACTTG 411
consensus_8847#1 ATATTTTGGA----ATCTTGGCGCATGATATTAGTTTTCATAGCA-TGTT--CTGTCTTG 392
**** ** **** ** * * * **** ** * * ****
consensus_8847#0 GCAAGGGCTGGTCCAGCGGCGGTGGATCGTACGGAGGCGGTAGCTCTTACGGAGGCGGTG 471
consensus_8847#1 GCTAGTTTAATTCTCATCGCGATGCTTCGATGGATAGCAAAACCTCTAATATGGATTTCG 452
** ** ** *** ** *** * ** * **** * * *
consensus_8847#0 GCTACTCGAAGGGTTGGCCCGTCA-GCAAGGGCTGGTCCAGCGGAGGCTCCTCGTTCGGT 530
consensus_8847#1 ATTATTGGAGTAATTACTGCGCTAAGCTATGG--AGTTTACTACAGCTTCCGGCAATACC 510
** * ** ** ** * ** * ** ** * ** ***
consensus_8847#0 GGCGGATACGGTGGTGGCAGCAGCTTTGGCGGTGGCCACTCGGGAGGTGGCTGGAGCTCG 590
consensus_8847#1 AGCAAATCCG-TGCCAA------------------------------------------- 526
** ** ** **
consensus_8847#0 GGCGGCAGCAGCCTCGGTGGATGGCCGTCGGGTGGTGGCGTGAGCAAGGGATGGCCGTCG 650
consensus_8847#1 ------------------------------------------------------------
consensus_8847#0 TCGGGCGGTGGATACGGTGGCAGCCAGGGATGGTCCTCGGGCGGTAGCGGTGGATACGGC 710
consensus_8847#1 ------------------------------------------------------------
consensus_8847#0 GGCGGTAGCCATGGAAG 727
consensus_8847#1 -----------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||